Spg023972 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023972
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Locationscaffold13: 1146591 .. 1149155 (+)
RNA-Seq ExpressionSpg023972
SyntenySpg023972
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAGGATCTTTGTGTGTTACGGTGGTCTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCAGGATTGGATGTGGATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTCTATAACCTGAGTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGACAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCAAAATTGCCGTTATACTTATCAATGATTCCAAAAGTTGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACCCACGATCTCACAACCTTTTTCACAACCGCCACCATCATTTGCACAGACTGGACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATGCACTTAATTACGAGGAAGAAGAGTATGATGAAGAGGAAGATGAAAACTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGATTATGATGATGACATTGCAGGAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGGAAGATGTTGCTCCCATTGCTTCTAGAAGGGAAGGTGCTTCTAGCCAGCAATTGATCACATCAGGTCAGTGTTCGTATTCTACTGGTGATGTTGAACTTGGACAACTATATGATTGTAAGGAAGAATTGAAAACAAGGTTGTCTGTAATGGCCATGAAGAAAAATTTCGAGTTTAGGGTTAAGAAATCCACGAAGTCTTTGTTCGTGGTGAAATGTATAATCGAATCTTGCAAATGGAAAGTTAGAGCTATAAAACCGAAGGGTTATGACTTATTCAAGATTTCGAAATATTATAATGTCCATACATGCTCACATGAATTACTAAATCACCATCATAGACAAGCGAAGAGTCGGGTGGTAGGTCATTTGATTAAATCGAAATTCGAGGATGTAAGACGAATTTACAAGCCAAAGGACATTATACAGGACATGCGAAAAGACTACGGGGTCACTATTAGTTATGAGAAAGCATGGCGGGCCAGAGAGGAGGCATTAGCTTTTGTTAGAGGGTCACCAGAAGAGTCATTTGGTCACTTACATGCATATGGTGAAGCGCTGAAGATCATGAACCCTGGGACCGTATATGATATAAAGCTCGAGGATGGAAAGTATTTTAAATATGTGTTCATGGCACTAGGTCAGTGCATTAGGGGGTTTATTCAATACATTAGGCCAGTCATTATAGTCGATGGCGCGCACCTAAAGGGGAAGTTCGGAGGTTGGCTTCTAATTGCGGCTGGAGTGGATGGGAACAATCAAATATACCCCATTGCATTTGGAGTTGTTGATGGTGAGACAGATGATGCGTGGCAGTGGTTCTTTGAGAGAGTTAAACGTTCTATTGGAGATCCCACTGGGTTGGTTATAGTATCAGATCGAAAGTCCAGTATTGGCAAGGCAATTAGAACAGTGTATCCATCTGCATTTCATTGTTTTTGCATACACCATTTATCTATGAACCTCACGAAGAATTTTAAGTGCGAAGGTGCAATACCTTTCTTTTTTCTTGCTGCAAAAGCATGTCGAGAGTCGGAGTTTCAAAACATGTTTGCTAAACTCCGTCCATTCAGTGGTGTTGCTAAGTACTTGGAAGAATTGGGTTTCCCACGTTGGGCTCGGGCTTTTCAGTGTGGACGAAGATACAATCAGATGACAACTAATGTGGCCGAAAGTATGAATGCAACATTGGTACATGCTCGAACCTTGCCGGTGACGAAGATGTTGGACAATATACGAGGCATGCTTCAAAGTTGGTTTTATCAGCATCGGACACATGCCTCTAGCCTATCTTCGAGGTTATCAGAGTACGCAGAAAACCTATTGATGGAAGCCGAGAAGAAGTCTCGAAGGCATAATGTGGAACCGATTGATTTCTACCAATATCAAATAGACGAAGGACAACTAGACTTTCGTGTCGACTTGCACATGAGGACGTGCACTTGTCGAGAGTTTGATTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCTGCATATCACACAGAATCTGTGATCCTATCATACGTAGAACCGATATATCCTGTTGGCCCTATGTTTGAGTGGAAGAGATCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAGTACAACAAGTTCACAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

mRNA sequence

ATGCCTAGGATCTTTGTGTGTTACGGTGGTCTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCAGGATTGGATGTGGATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTCTATAACCTGAGTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGACAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCAAAATTGCCGTTATACTTATCAATGATTCCAAAAGTTGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACCCACGATCTCACAACCTTTTTCACAACCGCCACCATCATTTGCACAGACTGGACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATGCACTTAATTACGAGGAAGAAGAGTATGATGAAGAGGAAGATGAAAACTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGATTATGATGATGACATTGCAGGAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAACATCGGACACATGCCTCTAGCCTATCTTCGAGGTTATCAGAGTACGCAGAAAACCTATTGATGGAAGCCGAGAAGAAGTCTCGAAGGCATAATGTGGAACCGATTGATTTCTACCAATATCAAATAGACGAAGGACAACTAGACTTTCGTGTCGACTTGCACATGAGGACGTGCACTTGTCGAGAGTTTGATTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCTGCATATCACACAGAATCTGTGATCCTATCATACGTAGAACCGATATATCCTGTTGGCCCTATGTTTGAGTGGAAGAGATCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAGTACAACAAGTTCACAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

Coding sequence (CDS)

ATGCCTAGGATCTTTGTGTGTTACGGTGGTCTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCAGGATTGGATGTGGATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTCTATAACCTGAGTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGACAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCAAAATTGCCGTTATACTTATCAATGATTCCAAAAGTTGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACCCACGATCTCACAACCTTTTTCACAACCGCCACCATCATTTGCACAGACTGGACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATGCACTTAATTACGAGGAAGAAGAGTATGATGAAGAGGAAGATGAAAACTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGATTATGATGATGACATTGCAGGAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAACATCGGACACATGCCTCTAGCCTATCTTCGAGGTTATCAGAGTACGCAGAAAACCTATTGATGGAAGCCGAGAAGAAGTCTCGAAGGCATAATGTGGAACCGATTGATTTCTACCAATATCAAATAGACGAAGGACAACTAGACTTTCGTGTCGACTTGCACATGAGGACGTGCACTTGTCGAGAGTTTGATTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCTGCATATCACACAGAATCTGTGATCCTATCATACGTAGAACCGATATATCCTGTTGGCCCTATGTTTGAGTGGAAGAGATCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAGTACAACAAGTTCACAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

Protein sequence

MPRIFVCYGGLWKENERDYEGGYLAGLDVDIDIRYEEFLRELYNLSDINPDQFDLIIRCLYNFGSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMIPKVVHGSGSNLGSHSHIPPTISQPFSQPPPSFAQTGPYNLAENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDALNYEEEEYDEEEDENWEYNEEDEELDESYEEESEADEFEEVDDYDDDIAGDGVEADGGTDGGNEHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT
Homology
[Close]
BLAST of Spg023972 vs. NCBI nr
Match: XP_022159268.1 (uncharacterized protein LOC111025678 [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 2.6e-47
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           + RT A+S S+ LS+YAEN+  E    +RRH V+ ID + +Q+ +G LD  VDL+   C+
Sbjct: 339 DRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNLDGIVDLNAMMCS 398

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           CREFDY++IPCSHAIAAA  RN+N  +LC  AY T S IL+Y EPI+PVG +  W  S E
Sbjct: 399 CREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHISTWNSSPE 458

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST 431
           F  + + PPK V RVGRR+TVRIPS GE   V+Q  KCGRCG  GHNRKTC EPL+T
Sbjct: 459 FVNIPVEPPKTVPRVGRRKTVRIPSTGE---VRQTRKCGRCGAWGHNRKTCSEPLTT 512

[Close]
BLAST of Spg023972 vs. NCBI nr
Match: XP_022155156.1 (uncharacterized protein LOC111022299 [Momordica charantia])

HSP 1 Score: 199.1 bits (505), Expect = 7.6e-47
Identity = 93/178 (52.25%), Postives = 129/178 (72.47%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           E RT+AS+ +S L++Y E ++  A +++R+H + PID Y+Y++ +G    RV+L+ ++CT
Sbjct: 105 EQRTYASTRASILTDYVEGIVKSAVEQARQHTIRPIDNYEYEVHDGNSKVRVNLNSKSCT 164

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           C++FDYY+IPCSHA+ A   RNV++ TLCSP Y  E+++ +Y EPIYP+G   +W    +
Sbjct: 165 CKQFDYYQIPCSHAVVATMHRNVSIYTLCSPKYKLETLLNTYAEPIYPLGDEEDWPLPDD 224

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT 432
           F E  I PPK VARVGRR+TVRIPSAGE    QQ+HK  RCG   HNRKTCR+PL TT
Sbjct: 225 FVEYTIEPPKFVARVGRRQTVRIPSAGE---PQQIHKYSRCGMQVHNRKTCRQPLRTT 279

[Close]
BLAST of Spg023972 vs. NCBI nr
Match: XP_022154610.1 (uncharacterized protein LOC111021833 [Momordica charantia])

HSP 1 Score: 197.6 bits (501), Expect = 2.2e-46
Identity = 98/177 (55.37%), Postives = 122/177 (68.93%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           + RT A+S S+ LS+YAEN+  E    +RRH V+ ID + +Q+ +G  D  VDL+  TC+
Sbjct: 150 DRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNFDGIVDLNAMTCS 209

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           CREFDY++IPCSH IAAA  RN+N  +LC  AY T S IL+Y EPI+PVG +  W  S E
Sbjct: 210 CREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHVSTWNSSPE 269

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST 431
           F  + + PPK V RVGRR T RIPS GE   V+Q  KCGRCG  GHNRKTC EPL+T
Sbjct: 270 FVNIPVEPPKTVPRVGRRNTTRIPSTGE---VRQTRKCGRCGAWGHNRKTCSEPLTT 323

[Close]
BLAST of Spg023972 vs. NCBI nr
Match: XP_022156830.1 (uncharacterized protein LOC111023664 [Momordica charantia])

HSP 1 Score: 196.1 bits (497), Expect = 6.4e-46
Identity = 93/177 (52.54%), Postives = 126/177 (71.19%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           E RT+ASS  + L+ Y EN +   E  SR H++ PID ++ ++ +G    RV+L+ RTC 
Sbjct: 38  ERRTYASSRETILTNYGENKMRTTENLSRTHSITPIDHHKLEVSDGLKRVRVNLNARTCE 97

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           C+EFDY++ PCSHAIAA    NVN  TLCSPAY  +++I +YVEP+YP+G   +W    +
Sbjct: 98  CKEFDYFQFPCSHAIAATTYWNVNRYTLCSPAYTIQTLINTYVEPVYPLGDKDDWILPDD 157

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST 431
           F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Sbjct: 158 FVDRIVEPPRYVSRVGRRQTIRIPSAGE---TRQVHKCGWCGNMGHNRKTCRQPLRT 211

[Close]
BLAST of Spg023972 vs. NCBI nr
Match: XP_022154803.1 (uncharacterized protein LOC111021969 [Momordica charantia])

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-45
Identity = 92/178 (51.69%), Postives = 128/178 (71.91%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           + RT  SS  + L+EYAEN+L E  +++R H+V PID +++++ +G    RV+++ +TCT
Sbjct: 667 DRRTAGSSRGTFLTEYAENILKEVAEQARYHHVRPIDRFEFEVHDGATKVRVNINSKTCT 726

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           C++F YYEIPCSHAIA A  RN++V TLCS  Y  +++I +YVEP+YP+G   +W    +
Sbjct: 727 CKQFYYYEIPCSHAIAGAVLRNISVHTLCSDRYRIDTLIQAYVEPVYPLGDEEDWILPYD 786

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT 432
           +    I PP+ V RVGR +T RIPS GE   V+QVHKCGRCGN+GHN KTCR+PL TT
Sbjct: 787 YVPTTIQPPRFVPRVGRCQTARIPSVGE---VRQVHKCGRCGNVGHNCKTCRQPLRTT 841

[Close]
BLAST of Spg023972 vs. ExPASy TrEMBL
Match: A0A6J1DYC4 (uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025678 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-47
Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           + RT A+S S+ LS+YAEN+  E    +RRH V+ ID + +Q+ +G LD  VDL+   C+
Sbjct: 339 DRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNLDGIVDLNAMMCS 398

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           CREFDY++IPCSHAIAAA  RN+N  +LC  AY T S IL+Y EPI+PVG +  W  S E
Sbjct: 399 CREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHISTWNSSPE 458

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST 431
           F  + + PPK V RVGRR+TVRIPS GE   V+Q  KCGRCG  GHNRKTC EPL+T
Sbjct: 459 FVNIPVEPPKTVPRVGRRKTVRIPSTGE---VRQTRKCGRCGAWGHNRKTCSEPLTT 512

[Close]
BLAST of Spg023972 vs. ExPASy TrEMBL
Match: A0A6J1DQV1 (uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022299 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.7e-47
Identity = 93/178 (52.25%), Postives = 129/178 (72.47%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           E RT+AS+ +S L++Y E ++  A +++R+H + PID Y+Y++ +G    RV+L+ ++CT
Sbjct: 105 EQRTYASTRASILTDYVEGIVKSAVEQARQHTIRPIDNYEYEVHDGNSKVRVNLNSKSCT 164

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           C++FDYY+IPCSHA+ A   RNV++ TLCSP Y  E+++ +Y EPIYP+G   +W    +
Sbjct: 165 CKQFDYYQIPCSHAVVATMHRNVSIYTLCSPKYKLETLLNTYAEPIYPLGDEEDWPLPDD 224

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT 432
           F E  I PPK VARVGRR+TVRIPSAGE    QQ+HK  RCG   HNRKTCR+PL TT
Sbjct: 225 FVEYTIEPPKFVARVGRRQTVRIPSAGE---PQQIHKYSRCGMQVHNRKTCRQPLRTT 279

[Close]
BLAST of Spg023972 vs. ExPASy TrEMBL
Match: A0A6J1DK35 (uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021833 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-46
Identity = 98/177 (55.37%), Postives = 122/177 (68.93%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           + RT A+S S+ LS+YAEN+  E    +RRH V+ ID + +Q+ +G  D  VDL+  TC+
Sbjct: 150 DRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNFDGIVDLNAMTCS 209

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           CREFDY++IPCSH IAAA  RN+N  +LC  AY T S IL+Y EPI+PVG +  W  S E
Sbjct: 210 CREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHVSTWNSSPE 269

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST 431
           F  + + PPK V RVGRR T RIPS GE   V+Q  KCGRCG  GHNRKTC EPL+T
Sbjct: 270 FVNIPVEPPKTVPRVGRRNTTRIPSTGE---VRQTRKCGRCGAWGHNRKTCSEPLTT 323

[Close]
BLAST of Spg023972 vs. ExPASy TrEMBL
Match: A0A6J1DRF6 (uncharacterized protein LOC111023664 OS=Momordica charantia OX=3673 GN=LOC111023664 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.1e-46
Identity = 93/177 (52.54%), Postives = 126/177 (71.19%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           E RT+ASS  + L+ Y EN +   E  SR H++ PID ++ ++ +G    RV+L+ RTC 
Sbjct: 38  ERRTYASSRETILTNYGENKMRTTENLSRTHSITPIDHHKLEVSDGLKRVRVNLNARTCE 97

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           C+EFDY++ PCSHAIAA    NVN  TLCSPAY  +++I +YVEP+YP+G   +W    +
Sbjct: 98  CKEFDYFQFPCSHAIAATTYWNVNRYTLCSPAYTIQTLINTYVEPVYPLGDKDDWILPDD 157

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLST 431
           F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Sbjct: 158 FVDRIVEPPRYVSRVGRRQTIRIPSAGE---TRQVHKCGWCGNMGHNRKTCRQPLRT 211

[Close]
BLAST of Spg023972 vs. ExPASy TrEMBL
Match: A0A6J1DLB0 (uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021969 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.3e-46
Identity = 92/178 (51.69%), Postives = 128/178 (71.91%), Query Frame = 0 

Query: 254 EHRTHASSLSSRLSEYAENLLMEAEKKSRRHNVEPIDFYQYQIDEGQLDFRVDLHMRTCT 313
           + RT  SS  + L+EYAEN+L E  +++R H+V PID +++++ +G    RV+++ +TCT
Sbjct: 667 DRRTAGSSRGTFLTEYAENILKEVAEQARYHHVRPIDRFEFEVHDGATKVRVNINSKTCT 726

Query: 314 CREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGPMFEWKRSAE 373
           C++F YYEIPCSHAIA A  RN++V TLCS  Y  +++I +YVEP+YP+G   +W    +
Sbjct: 727 CKQFYYYEIPCSHAIAGAVLRNISVHTLCSDRYRIDTLIQAYVEPVYPLGDEEDWILPYD 786

Query: 374 FQEMEILPPKRVARVGRRRTVRIPSAGERPQVQQVHKCGRCGNIGHNRKTCREPLSTT 432
           +    I PP+ V RVGR +T RIPS GE   V+QVHKCGRCGN+GHN KTCR+PL TT
Sbjct: 787 YVPTTIQPPRFVPRVGRCQTARIPSVGE---VRQVHKCGRCGNVGHNCKTCRQPLRTT 841

[Close]
BLAST of Spg023972 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 47.4 bits (111), Expect = 3.4e-05
Identity = 21/64 (32.81%), Postives = 29/64 (45.31%), Query Frame = 0 

Query: 305 VDLHMRTCTCREFDYYEIPCSHAIAAARDRNVNVATLCSPAYHTESVILSYVEPIYPVGP 364
           V L++ TCTCR+F  Y+ PC HA+A      +N        Y  E    +Y     PV  
Sbjct: 636 VQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPD 695

Query: 365 MFEW 369
           +  W
Sbjct: 696 VAAW 699

The following BLAST results are available for this feature:
BLAST of Spg023972 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159268.12.6e-4756.50uncharacterized protein LOC111025678 [Momordica charantia][more]
XP_022155156.17.6e-4752.25uncharacterized protein LOC111022299 [Momordica charantia][more]
XP_022154610.12.2e-4655.37uncharacterized protein LOC111021833 [Momordica charantia][more]
XP_022156830.16.4e-4652.54uncharacterized protein LOC111023664 [Momordica charantia][more]
XP_022154803.11.1e-4551.69uncharacterized protein LOC111021969 [Momordica charantia][more]

Pages

BLAST of Spg023972 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg023972 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DYC41.3e-4756.50uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DQV13.7e-4752.25uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DK351.1e-4655.37uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1DRF63.1e-4652.54uncharacterized protein LOC111023664 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DLB05.3e-4651.69uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021... [more]

Pages

BLAST of Spg023972 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64260.13.4e-0532.81MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..243
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 271..426
NoneNo IPR availablePANTHERPTHR31973:SF144BNAANNG04630D PROTEINcoord: 271..426
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 310..337
e-value: 7.4E-12
score: 55.4
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 303..332
e-value: 8.0E-9
score: 35.0
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 303..335
score: 10.682259
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 410..426
score: 8.614303

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023972.1Spg023972.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding