
Spg023949 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTCAATGGGCTGTCCACTGCCTTGCAAAGCCCAAACTTTCGCCATGAACCGTACAAAATTGCCCAAACAAGATCGTCGGATCGAAGTCGGAGACCGTACCCCACACAGAGGGGTGGCAATTCCTGCAGTCCACGGCGGAGCAAAACAATGGCTTCTATGGAGTCGTCTAGTTCTGCTCGAAAAGGTGAGCTTCTTTGACGACGTATGAACAAACCGATCTTCAATTTGAGCTAATTTAGCTGTATTTTGATGAATCGAACTTTCAAACGTTGTTCAATCATCGGGCTTAGTTGATCTGATTCAGAAGAAGAAGTGTTTAACAATTTCTGTTTAATTACGACGCTTTCCTAATGTGGTTTTCGATCAAGAATTATGGTGATTTATTTGGTTTTGTTTTTGGTAGTGGTTGTTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGGTTTGTATTACGTTAAATTTGTGTGTTATGTCGTTGAACATGTAAAAATAGAAATCCAATCTGGATGGCTATGAAAACTTTTAATCATTTGATTGGATCAAGATAAACTGAACAAGAGCCGACTGATTCTAGTTAGTATCAAGAATCAAACCGATTGATTTGTTGAAACACCACTAAATCCAAAAGCTTAAACTGATAGGGTAGGATAAATTTAGTGTTTTTATCAATACTTTAACATGATTCTGGCAATGGTGTATGTCTATGTAGGTAAGTTTGTGCACACACTGTTGTTTTAAAGCTTGAGGCTCACCAAAGCGCATCAGCCCTTTGAGGCGCGTTTTGTAGTTAATAATAAGAGTAAGACACAAATAAAAGCGGGGACTTTTTTTATAAAACGTTTAAGACGCACAAGCTGGCCACCTACCCAAGATTTAATAACAGCCATGGGAAAAATAAAGGGCTTAGAGGGAATAGGTTCAATCCATGATAACCACCTACCTAGGATTTAATATCCTATGTGTTTCTTGGCAACCAAATGTAGTATGGTCAGACGGTTGTCTCGTGAGATCAGTCGAGGTGTGTGTAAGCTGGCTCAAACACTCACAGATATTAAAAAAATAAAGAGTTTAAGATGCACATCAATTGCTGAGTTGCGAGCTTCAAGCGGGCTTTTTAAAACACTGTGCCTGCACACACACATAATAGTTGCTGAGTGAGACATAGATGGAGTAGGCTAATAGATGAAGAAGACAACTAATCTAAGAGCCAAAAGGAATGAAGCTTAATCTTTGCCTTTTTTTTTTTTTTTGAAATGTTTCATATGTATTAGATTTCATGGATGCAATGCCACATCCTTATGATGTACAAAATTCACATTGCATTGAGGAAACTTTCATAGGATAACTGATGAATTAAATAGTTCTAAAAAAAAAAAACTGATGAATTAAATAATATGGTTTTTTTTTTTTGGGGGGGGGGGGGGGTAAACTTATGAAATGGCCGGTATTAGAATGTGTGGGTTGTGCAAAATTGTATACAGAAGCTCCTCCCCTCAAAGTTTCTCTGTTTGGAATTTGGTTTACTATATCTGTAAGTTTATGACAAATGTTCATTCACATATTGCATACATTTGGCAGATGCCAGGAACAGACAAGTTTATTAAAGTTATTGATTACATACGTCGGTCAATTCAACGAGACACCTTGGTATTCATCTGAGTTCAGAAATAGTCTCTCCTGTTTGCCAATTCATTTGAAATTAATGTCCCTTCACTATGCTAATTGTTTATATTCTTTGAAGTTTGTGTTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAATGTGAGTTGATATTGACTCATTTCGTCAATTTATGTTCAAGTTTTGTTTGTGTACTGTTTTCACTAATTTCTTGAAGAAGAAAAGGAGGTGGGGGAATTTCTTTTCTGATGAATTTGTTGGAAAATACCTTAAAAGACTCTATTGGCTAGTTTAAAACTGTCATCTTAAGTGAGGGGTAGATTGAAATTTGAAGATGTAGACTTCTGATGTTGATGTTGGTCATGAAATTTCATGAAAGCACAGATCATTTTATATTCTTAGAAGGTGAAAGAAAAGGTCTTGCTGAGGTGGCATGTGCCAGTACGGCATTGCTTACTTTTGGTGGTAGAATGATTCTGGTAAGAGTATAGATCTACATTCAAATCGGATAATTAATTTGAAAACTTTCTGAAGCATGTTAACCACAAGATCTGTTAGACTATCTGAAAATATAGCATCATATGAGTTCACTTCAATTTTTATCATAGTAGTTTCTCAATCTGTTTCTTTACCGAAGGATAAATATATGGTTTTGCATATCCACTTGAGTTTAAAGTTTTCTGAAGTCCTGGTGGCTAGGAATCTTACTGATTATCTTTTTCGTGTGCCTATTTGCAGAACTTTGGAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAATGTTCAGTGTGGTAGTGGTTAGTGCTGAGGCTGTAAATAGAATATTGAACAGTTCATTCTAAAGTGCTGCGACTTTAAACTCATCCATTTATCTTTTACGAACTATAGCGGTAAAATTTCTTCCACATTATAGGCTGCTTTCCTATATGGAAAAACGCATCAAGTCAAGTTCTAGATCATACTTGTCAAGTTGTCAAGGTCCAGAGTCTGTATTTATTTATTTATTTGATAGACCTGTTTAATTAATTGTTTTAACATAGAATATGAAAGCCAAAGGATATTTTGTTCCAAATAGTGATATGGAAGCTCAAATTCTTGATTAGCCTACTCAGTTCCATATTTTTCTTTGACATCATAACAGCCATTGACCGATACAAGTGCACATTGCTATCTAAGTTCCATACTCTGTCTGATGAAAGAGATTGGTTCTTTTGGTTGGAGATGACATGACTTTGTGTTTAGCCTTCATAACTAGTCTGGTTTCCTCGTTTAACATGCTGGGGATATAAAAATTCTCTTGTTGTTTCTTTTCTCTCCATGATAAAAGTTAGGTGGGAACATTTAATTCTAATAGTAAGCTCCAAAGGAAGGCCAATATGATGGTATGGATAGGAGGAAACACAAACAAATAATGAGTTTGAGCGACTGTCTGGGTGTTATATATATAATAGTACATTAGTACTTAAGCTTGGCTGTAAATTTGTACACATCTGTTTTGTTTGGGTAAAATCCAAGAATGACAAGATATAGACGCAGACTGTATCAGGCTGAGTGTTATGTGGTGGAGGAATGCTGGTCTGCACTATTTGTCTGATTCTGACCTTCTGAAAATTTGGACTAAACTCGTGAAAGAAAGTGAACAGTTTCTTTTCTTTTTTCTTTTTTTTTTTCTCTGTCTTTGGGTCTATCAGAATGATTCTTTTCATATCCCCCACCACAGCATCAGATTATGAGGCAAAATCTATAAACTTAAACCGTCCCCTCTTAATGAGTGCACTAGCGAACTCCCTTTCTCTCTCTAAACTTGAGGGATTACTATATGTAGCACAAGATCTCTCTATCTCTCTCTCTCTCTCTCTAAACTTAGGAGTTTACCATTTTCACACAAAATGTCTCTTGCTTCCCCTATGGTCGAACTTCCTTTGTCTTTCATTATATTTAGAGAAGTGTAAAGAATTACAATCTTTGGAATATGATATTTCGTTGATACCCTTTATTATTTTGTTTTATTTTCTTTCTCTTCCTTGTGGGGTTTGTCTTACTAGAGACTAACACTAGTCTCTTTCCATTTCTTCAATGAAAAGTTTCGTTTCTTGTTCGAAAAAGATAGCAGATAGAGTAGATAGCATTAGATCAAGTTAGTAGGAATCTATTCATCAGCAACCAAATAATTTGGATAAGGCTATGAATGAAACAATAAAGTTTTAGATAAATCACTAATGATTTGCATTAGAGTGCACCAATAACCTAAGCTTATCGTCACTGCTTATGATAACCAATCAGAGGAATTTACTCATCCACTCCAAATCAGGCCCCTCATTGGAAAAATCAAACAAGTTATCGACATCAAACTCCAAGTTCGAGCTGTTTTCACATTCTTGAGATGTTTCCTCTTCCCTTGACTCTGTGTCTACTTTTCTTTTACTCCCTTTTCTTTTGAGAATGTCACTTTCTTTTTCACTCGGTTGGTTCATTTTCTTGCTCAAATGAGAATTCCAGTAGTTCTTTATCTCATTATCCGTTCGCCCGGGCAGTCTCCCAGCAATCAAGGACCACCTGAGAAGACCAATCAGGCACCACCCCCACCCCCCAACCCAGAAAACCAAAACTCCTTCAGATTATGAAACAGAAAGATAATCAAAACAACAAAATTTCAGAGTGAAATGAGTAAGAATGTGACCTGTTGCCAAGAAGTTTATGGAGCCTGAGGATCAAATCTTCCTCTTGATCTGATATATTCCCTCTCTTTATGTTAGGTCTGAGATAATTCAGCCATCTCAGTCTGCAACTCTTCCCACACCGATTGAGACCTGCAAAATTTTAGAAAGCCATTAAGCTAAATTAGCCTTGCAGCTCGAGTTGGAATATAGAAGAGGAAGAAAAAAGGAGTGAAAGCACCTGCTTTGGCTGCAATCGTCTTCCACCTTTTTGCTCCATGAATGGCAATAACTTCAGCCAGTTTTTGATCTTCTTCTGCAGTCCAAGCGCCTTTATTGACTCCATTTCTCACATTTTCAGCCTCATTTATGTCTCCTTCAACTTGTTTCACTTTTCTTTTCACAGAGTCTTCTTCAGTCATTGGAACTTTAAGAGATAGAGATAGAAAGAGAGAGAGAGAGAGAGAGAAAGAGAGATTATGGCTTAGAAGAGTGCTTTATTTCTCTTTTAAGAGGTGAAAATATAACAGAGATCTCAGCTAGCAATTAGAGATATATATGAAGAAGTTGGAATTATTTTTTGGGTTTGCAGTCTTTCAGGAAAAGGACACTCTGATCATGAGGTCGATGATTGAGTGAGATATAAAGTCTGCTTCTAAATAGTTGCTCACTGTTTGTACAACTCAACAAACAACAGCTAGCAAAAGATCCTGTTTAAGAAAAAAAGGCTTCTTGTTATTATTTCCTTCATATTATATTGTTTTCTATACATACAAATTCTAATGATCTTTTTTAATCATTTTGCCTTACCAGTTTTCTTGACAACCAAATGTAGCAGGATCAGGTTGTTGTCCATGAGAATAGTTGAAGTGTGCACAAACTGACCTAAATACTCATGCAACACTCACTGAGTTCTCATTCAAGGTATTTAGTTCTTTTTTTTAGTTTGCAGCATTTGAGATAGGGAGATTCGAACCTCTGACTTCTTGGTCGATGGTATATGTCAATTACCGTTGAGCCATGTTTACTTTGACAGGGTCTTTAGTTAATGATTCAAGTTGTTTTCCTCTGGATGATGAAGCTAATATTCCATTGTCTCACTAATCAACCTTGACCCGCGTTATTCTGAGTTCACATCTAGCATTTAGAATTGATCTCGAACATTTGGTACCACTCCCATGGCCCACACCGAAACAGTGCTTTATCCCATCAATCTTATTGTATTATTTTGAATAAATGAAAGTCAGGAACTCTCATGAAAATCAGAAACAAAAGGGAAAGGCTTTTTAGAGAGAGAAAGGCCTCGAATTTAGTGAAGAATCTACAATAATAGAAACAAGAATAAGAGAAGGGCAGCACATGATTTTAGAGAGAGAGAGAGAGAAAGAAATCAATGGCTACAAGGGAGGACAAAGTGAAAAATAAGCACAGAACAGAAAAGTGTTTTGTCTTGAAAGAATAGAACTTTTTCAGAGCCATAGAAAGGAGAGAAGATCAAAACTCTTTTTATTTTTATGATCAGTATGCATGAATATGAAATTTGATTGGTTTTCAAGTTTTCATATTCCTATTTTCTCTGTCCAAAGCTGAG ATGGCTTCTATGGAGTCGTCTAGTTCTGCTCGAAAAGTGGTTGTTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCAGGAACAGACAACACAGATCATTTTATATTCTTAGAAGGTGAAAGAAAAGGTCTTGCTGAGGTGGCATGTGCCAGTACGGCATTGCTTACTTTTGGTGGTAGAATGATTCTGAACTTTGGAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA ATGGCTTCTATGGAGTCGTCTAGTTCTGCTCGAAAAGTGGTTGTTCTGCTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACCAAGTTTAAGATGCCAGGAACAGACAACACAGATCATTTTATATTCTTAGAAGGTGAAAGAAAAGGTCTTGCTGAGGTGGCATGTGCCAGTACGGCATTGCTTACTTTTGGTGGTAGAATGATTCTGAACTTTGGAATTGACGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA MASMESSSSARKVVVLLRATGDAPILKQTKFKMPGTDNTDHFIFLEGERKGLAEVACASTALLTFGGRMILNFGIDGKLVVNYACSMAWG Homology
BLAST of Spg023949 vs. NCBI nr
Match: XP_038878493.1 (ubiquitin-like protein ATG12 [Benincasa hispida]) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 57/95 (60.00%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of Spg023949 vs. NCBI nr
Match: XP_004151012.1 (ubiquitin-like protein ATG12 [Cucumis sativus] >KGN59786.1 hypothetical protein Csa_001664 [Cucumis sativus]) HSP 1 Score: 95.1 bits (235), Expect = 3.2e-16 Identity = 56/95 (58.95%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Spg023949 vs. NCBI nr
Match: XP_008464001.1 (PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]) HSP 1 Score: 94.0 bits (232), Expect = 7.2e-16 Identity = 55/95 (57.89%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Spg023949 vs. NCBI nr
Match: XP_022153405.1 (ubiquitin-like protein ATG12 [Momordica charantia] >XP_022153406.1 ubiquitin-like protein ATG12 [Momordica charantia]) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-15 Identity = 58/98 (59.18%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Spg023949 vs. NCBI nr
Match: XP_022955552.1 (ubiquitin-like protein ATG12 [Cucurbita moschata] >XP_023526053.1 ubiquitin-like protein ATG12 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6581816.1 Ubiquitin-like protein ATG12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018264.1 Ubiquitin-like protein ATG12 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 92.4 bits (228), Expect = 2.1e-15 Identity = 54/95 (56.84%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy Swiss-Prot
Match: Q1SF86 (Ubiquitin-like protein ATG12 OS=Medicago truncatula OX=3880 GN=ATG12 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 4.4e-16 Identity = 50/95 (52.63%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy Swiss-Prot
Match: Q8S924 (Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana OX=3702 GN=ATG12A PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.3e-15 Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy Swiss-Prot
Match: Q9LVK3 (Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana OX=3702 GN=ATG12B PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.7e-13 Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy Swiss-Prot
Match: A2YAG8 (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica OX=39946 GN=ATG12 PE=3 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-08 Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy Swiss-Prot
Match: Q69NP0 (Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG12 PE=3 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-08 Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy TrEMBL
Match: A0A0A0LIA6 (Ubiquitin-like protein ATG12 OS=Cucumis sativus OX=3659 GN=Csa_3G846020 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.6e-16 Identity = 56/95 (58.95%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy TrEMBL
Match: A0A1S3CKI1 (Ubiquitin-like protein ATG12 OS=Cucumis melo OX=3656 GN=LOC103501992 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.5e-16 Identity = 55/95 (57.89%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy TrEMBL
Match: A0A6J1DGR5 (Ubiquitin-like protein ATG12 OS=Momordica charantia OX=3673 GN=LOC111020917 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.9e-16 Identity = 58/98 (59.18%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy TrEMBL
Match: A0A6J1GTZ1 (Ubiquitin-like protein ATG12 OS=Cucurbita moschata OX=3662 GN=LOC111457534 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.0e-15 Identity = 54/95 (56.84%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Spg023949 vs. ExPASy TrEMBL
Match: A0A6J1J054 (Ubiquitin-like protein ATG12 OS=Cucurbita maxima OX=3661 GN=LOC111480033 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.0e-15 Identity = 52/95 (54.74%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Spg023949 vs. TAIR 10
Match: AT1G54210.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 5.9e-16 Identity = 51/96 (53.12%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Spg023949 vs. TAIR 10
Match: AT3G13970.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 75.9 bits (185), Expect = 1.9e-14 Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Spg023949 vs. TAIR 10
Match: AT1G54210.2 (Ubiquitin-like superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10 Identity = 43/91 (47.25%), Postives = 45/91 (49.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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