Spg023928 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023928
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 5542606 .. 5544532 (-)
RNA-Seq Expression	Spg023928
Synteny	Spg023928

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAAGTCAGCAAACAGAACGGTAGGGCGTGGAAAAGTAAGAGCAAGAGGAGAAAGCAGAGAATAGAGAGTAGAGTTTAGGGATAGAATTCGGGATCCCCTCTTCAGTGGCGAAGAGGGATATAAATACCTGCTCATCCTCCTAGGGTTTTTAGGTATTCGGAGGCGTTTTAGGTCAAACCAGGAAAAACCGGGGCAGCCAGAGGCGGTGGAGACCAGACGAGACCGAACGGGCTCGGCCGGCCTCGGCCGCAGGGGGTCGGGCCAAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTTGCCTCCTTGGTCCATCTTCCGGCCAGATTTCTCCCCGGTTGTCCTCGTCAGCTCCTTGTATATCAGGGTGGTCCAAAATTGCCTATAATATTAAGCCCCCACTCTTGAATTGGGATTCGGGGTGACTTATTGCTATAAGTTGAGCTCCTTAAGCCCGATTTAAGAGTAATGACCCTTGCCTTGGGCTGGCTTATGTGTAGCTTTGTTGTCATCCTGCAAAGTAAGATAGAAGTAGACACTCCCTGAATAGGGGTTAGATGTAATGGAAATGAAAAAGGGTGAGAGATTACAAAAGTGGTGCTGGTCGGCCTCGGCCTCGGGAAGAGGCCGAGCACAGCTATCTCCCTTTCTGCTTGCCTGGTCAGCCTCGGCCTCGGGACGAGGCCGAGCAGCTTTCTAATTTTGCTTCATTTCAGGTTCACGTCTGCAAGAGAAAAGTTAGGGAAAAGGCTAGGGTCGGCCTCGGCCTCAAGCCCCCGTTAGCCTAAAATTTGGCTCCCTTTAGAGTTTGTGTTTGGCCTCGGCAAGAGGTGCTCGGCCTTGGCAAAAGGTGCTCGGTCCCGACTTCTGTAGGGTGAGCTTGACTTAGATGAAGTGTATGGACTCATGCCAAGTGAGGTGAGGTAGACTCGGTTAGTCCAAGCCCGCATGATGGCGTGGGCGCTAAGCTGAAGAGCTTAGGCTCGCAAGGTAAGCGTGGGCACCATAGGCTCGCTGAAGCGTGGGCTCTATGGGCTCGCATGTAGGCGTGGGCACTATAGGCTCGCTGAAGCGTGGGCACTATAGGCTCGCAAGGTAAGCGTGGGCACCATAGGCTCGCTGAAGCGTGGGCTCTATGGGCTCGCATGTAGGCGTGGGCACTATAGGCTCGCAAGGTAAGCGTGGGCACCATAGGCTCGCTGAAGCGTGGGCTCTATGGGCTCGCATGTAGGCGTGGGCACTATAGGCTCGCTGAAGCGTGGGCACTATAGGCTCGCATGACGTCTTATCACGTTCCTGGAAACACACTCTAAGCCTTGACAAGGGAACATCTAGGTCCTATCATTAATGCTAACGCTTGCTTTGAATGGTAAAACAAAAGGAAAAGTCTACTCCTACCTACCAAAAGTAAAATGAGCGACAGTGCTCTAATTACATGATAAATGTGCAAATAAAGAAAACTAGAATTCCCTAAACTAAGGCTTAGTGTGCTCTCCAGAATGCTGTCCTTGACCCTGGCAAGAGGTGTGGTAGGGCTCGGCCTCGGCCTCGGCCATGGCCATAGGAGAGTCTGTCTTGGTCCTCAACGGATTTCCAGAAGAGGTCCACCACCATCTTTGCCCGGGTCATCTCTTGTCGGCCTCGGCCATCTCTGGTCGGCCTCGGCCTTTGCGGTGAATTCCTTCAGGTATCCGTTTTGGATCAACGCTTCGATCTCGTCTTTCAGCTGAATGCAGTTCCTGGTCGAATGTCCATGATCTCGATGGAAGAGACAATACTGGCTTTTGTCTCTGTGGTCAGGATTTGACTTCAGCTTCCAGGGTGCGCTGAGGAGGTTTGTATTCCTTATCTCCATCAAGATCTGCTCCTGTGGGACTGAAGTAGGGGTGTACTTTTCAAATTTCTTCAAGTAG

mRNA sequence

ATGCTTAAGTCAGCAAACAGAACGGTAGGGCGTGGAAAAGTATTCGGAGGCGTTTTAGGTCAAACCAGGAAAAACCGGGGCAGCCAGAGGCGGTGGAGACCAGACGAGACCGAACGGGCTCGGCCGGCCTCGGCCGCAGGGGGTCGGGCCAAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTTGCCTCCTTGGTCCATCTTCCGGCCAGATTTCTCCCCGGTTGTCCTCGTCAGCTCCTTGTATATCAGGGGTGAGAGATTACAAAAGTGGTGCTGGTCGGCCTCGGCCTCGGGAAGAGGCCGAGCACAGCTATCTCCCTTTCTGCTTGCCTGGTCAGCCTCGGCCTCGGGACGAGGCCGAGCAGCTTTCTAATTTTGCTTCATTTCAGGGTGAGCTTGACTTAGATGAAGTGTATGGACTCATGCCAAGTGAGGCTCGCAAGGTAAGCGTGGGCACCATAGGCTCGCTGAAGCGTGGGCTCTATGGGCTCGCATGTAGGCGTGGGCACTATAGGCTCGCAAGAATGCTGTCCTTGACCCTGGCAAGAGGTGTGGTAGGGCTCGGCCTCGGCCTCGGCCATGGCCATAGGAGAGTCTGTCTTGGTCCTCAACGGATTTCCAGAAGAGGTCCACCACCATCTTTGCCCGGGTCATCTCTTGTCGGCCTCGGCCATCTCTGGTCGGCCTCGGCCTTTGCGGTGAATTCCTTCAGCTTCCAGGGTGCGCTGAGGAGGTTTGTATTCCTTATCTCCATCAAGATCTGCTCCTGTGGGACTGAAGTAGGGGTGTACTTTTCAAATTTCTTCAAGTAG

Coding sequence (CDS)

ATGCTTAAGTCAGCAAACAGAACGGTAGGGCGTGGAAAAGTATTCGGAGGCGTTTTAGGTCAAACCAGGAAAAACCGGGGCAGCCAGAGGCGGTGGAGACCAGACGAGACCGAACGGGCTCGGCCGGCCTCGGCCGCAGGGGGTCGGGCCAAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTTGCCTCCTTGGTCCATCTTCCGGCCAGATTTCTCCCCGGTTGTCCTCGTCAGCTCCTTGTATATCAGGGGTGAGAGATTACAAAAGTGGTGCTGGTCGGCCTCGGCCTCGGGAAGAGGCCGAGCACAGCTATCTCCCTTTCTGCTTGCCTGGTCAGCCTCGGCCTCGGGACGAGGCCGAGCAGCTTTCTAATTTTGCTTCATTTCAGGGTGAGCTTGACTTAGATGAAGTGTATGGACTCATGCCAAGTGAGGCTCGCAAGGTAAGCGTGGGCACCATAGGCTCGCTGAAGCGTGGGCTCTATGGGCTCGCATGTAGGCGTGGGCACTATAGGCTCGCAAGAATGCTGTCCTTGACCCTGGCAAGAGGTGTGGTAGGGCTCGGCCTCGGCCTCGGCCATGGCCATAGGAGAGTCTGTCTTGGTCCTCAACGGATTTCCAGAAGAGGTCCACCACCATCTTTGCCCGGGTCATCTCTTGTCGGCCTCGGCCATCTCTGGTCGGCCTCGGCCTTTGCGGTGAATTCCTTCAGCTTCCAGGGTGCGCTGAGGAGGTTTGTATTCCTTATCTCCATCAAGATCTGCTCCTGTGGGACTGAAGTAGGGGTGTACTTTTCAAATTTCTTCAAGTAG

Protein sequence

MLKSANRTVGRGKVFGGVLGQTRKNRGSQRRWRPDETERARPASAAGGRAKNPTPSVLARPTCRFCLLGPSSGQISPRLSSSAPCISGVRDYKSGAGRPRPREEAEHSYLPFCLPGQPRPRDEAEQLSNFASFQGELDLDEVYGLMPSEARKVSVGTIGSLKRGLYGLACRRGHYRLARMLSLTLARGVVGLGLGLGHGHRRVCLGPQRISRRGPPPSLPGSSLVGLGHLWSASAFAVNSFSFQGALRRFVFLISIKICSCGTEVGVYFSNFFK

Homology

The following BLAST results are available for this feature:

BLAST of Spg023928 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023928 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023928 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023928 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023928.1	Spg023928.1	mRNA