Spg023908 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023908
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein ZIP4 homolog
Location	scaffold13: 7495507 .. 7497579 (+)
RNA-Seq Expression	Spg023908
Synteny	Spg023908

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTCGTCTTTGCAGGAGGGGAAGAGATGGTTTTACATGTCGACCTTTGATGAAGAGTCTCGCCATTGTGGTGTGGGGGCAGTTATCAGAACAAGGGAAGGACAATTGGTGGCTGTTTTGCATAAGGGTTTCCCTCTGTTCTCATCTCCTTTATGTGCATAGGCGGTAGCGATTCTGGAGGGACGTAAGTTGTCAGTTCGGAAATCCTATTTTTAAGGGATGCTTTCCAAAAGACTGTTTTTTGTCATGTCAATCATGAGTACAATAGGATGGCTCACGAATTAGCTAGATTCAGTCTGCATGCTCCGAATTGTGTTTGGAGTATGAATTTTCTAGAGTGGGTTGTTCGATTAGCTAATAGTGAGTTGCACTATTTTATAACCCCACAAGAGATTAAATGAAAGAATCTGGATTTCAAAAAAAAAAAAAAAGAAAAAAAAAAGTAATTAAACACTTGAAAAGTAATATTGAAAGTCAAGGTTGTGCTTTTATGGGATTTCTGCTGAATTACACATTTACATTTTTTTTACCAAATCAGATATACTATTCATTTAATGAGTTATTTATTTATTTATTCATTTAATGAGTTATATGTATATATCAACACATACATTTGAAATGTGTACAAATACGCAATAATTACATAATTATAATAAGTTTAGGTTTCCTTGTCAAATCGAGCTTAGCTCAGCGGTAATTGGCATATACTCTCGACCATGAGGTCAGAGGTTCGAATCCCCCCACCCCCAAATGTTGATGTACTCAAAAAAAAAAATATATATATATATTTTTAGTCCCTAGGTTTGAGTTAGGTTTCATTTTGATCCTTCTATCCATTTTTCCGTTAAAAACTAACGGATGACGTAGCACTATTTTTTTATTTAAAAAATTATTTTTTTAATTAAAAATATATTAAAATAATAAAAATATTATTATTTTGAATTATTTCATTTCTTTTTCTTCCTTCTCTCTTCTTCCCCCTCCTTCTTCTTCTTCCACTACTTCTTCTTCAACAGTCAACCCCTTCAACCCATGGCCGTTGGCCGTTGGCCGTCGACCACTGCTCGCAGTCGATTTTTTTTTTTTTTTTTTCTTTCCCTTCTTCTCCAGTACTTTAAAAAAAAACAATAACCGAGGAGAGAGCTCCCTTCTCTCCAACACCTCCGTTGATCCTCTATCGAGCATGCCAATCTCCGCCATGTCGACTCGGACGTCCTCTACCTCGCCGTCGATGTCAACAGAGTCCCTACCCCTGCCGTCAAGTCCGCTTCGTTCTACTACAAGACCGGATTGATATGGTATAGTCTCAAGAACTTCGAACTCGCCTCCAATTGCTTTGAGAGGGCTTCGAATATCGTTTCGAAGATGGATCTCACCGCAGTCGTCGATGCTGGCGCCAAAAAGCCTCTATTGGATCTGAACATCGCTAGGTCTCGAACGGCCTAGCAAGTCTCTGACAGGAATCTCACTGTGGTGCTTCTCAATCGAGCGAAAGGTTTGATGTTCAGCTCACCTGAGCACTACAAAGCGCTTGGAGACGAGTACTTGGCGGTTGGGAAGACCGAACTATCGAAGAGGGAAAATCATGCATTCCGCGAGGCTCTAAAGCTGATGAACGAAGCTCTGGATCTATTCGAGAAAGGTCTGCATGTGGCAAGAGCTAGAGAGGAGATGGTTGAGTTTAAAGTCCTAAGATCCAAGACGCTGAGGTTCATTTCAGCTGTTCATTTGCAGATTGATGAGTTCAAGAATGTGATTAAGTGTGTGAGGCTTTTAAAAGATGGAGATTGCGGCGATAATCATCCAAGCCTGTCGGTTCTGGCTATGAATGCTTGGTTGGGGTTAGGAAGGCATAGGGAGGTCGAGCAAGATCTGCGAGGAATGATTGAGAACAAGGGAATTCCGGAGAGTGCTTGGGTTTCGGCTGTTGAGGCTTACTTCGAGGCGGTGGGAGGGGCTGGAACAGAGACCGCCACGGGAGTGTTCATGGAGCTGAAGCAGGCTTACTTCATTTTTCCGCCGGAAAACAGAGGAGGGAGCTCTCTCTCTCCCTCCCCGTTTCAGATCTGA

mRNA sequence

ATGTGGTCGTCTTTGCAGGAGGGGAAGAGATGGTTTTACATGTCGACCTTTGATGAAGAGTCTCGCCATTGTGGTGTGGGGGCAGTTATCAGAACAAGGGAAGGACAATTGGTGGCTCATGCCAATCTCCGCCATGTCGACTCGGACGTCCTCTACCTCGCCGTCGATGTCAACAGAGTCCCTACCCCTGCCGTCAAGTCCGCTTCGTTCTACTACAAGACCGGATTGATATGGTATAGTCTCAAGAACTTCGAACTCGCCTCCAATTGCTTTGAGAGGGCTTCGAATATCGTTTCGAAGATGGATCTCACCGCAGTCGTCGATGCTGGCGCCAAAAAGCCTCTATTGGATCTGAACATCGCTAGCTCACCTGAGCACTACAAAGCGCTTGGAGACGAGTACTTGGCGGTTGGGAAGACCGAACTATCGAAGAGGGAAAATCATGCATTCCGCGAGGCTCTAAAGCTGATGAACGAAGCTCTGGATCTATTCGAGAAAGGTCTGCATGTGGCAAGAGCTAGAGAGGAGATGGTTGAGTTTAAAGTCCTAAGATCCAAGACGCTGAGGTTCATTTCAGCTGTTCATTTGCAGATTGATGAGTTCAAGAATGTGATTAAGTGTGTGAGGCTTTTAAAAGATGGAGATTGCGGCGATAATCATCCAAGCCTGTCGGTTCTGGCTATGAATGCTTGGTTGGGGTTAGGAAGGCATAGGGAGGTCGAGCAAGATCTGCGAGGAATGATTGAGAACAAGGGAATTCCGGAGAGTGCTTGGGTTTCGGCTGTTGAGGCTTACTTCGAGGCGGTGGGAGGGGCTGGAACAGAGACCGCCACGGGAGTGTTCATGGAGCTGAAGCAGGCTTACTTCATTTTTCCGCCGGAAAACAGAGGAGGGAGCTCTCTCTCTCCCTCCCCGTTTCAGATCTGA

Coding sequence (CDS)

ATGTGGTCGTCTTTGCAGGAGGGGAAGAGATGGTTTTACATGTCGACCTTTGATGAAGAGTCTCGCCATTGTGGTGTGGGGGCAGTTATCAGAACAAGGGAAGGACAATTGGTGGCTCATGCCAATCTCCGCCATGTCGACTCGGACGTCCTCTACCTCGCCGTCGATGTCAACAGAGTCCCTACCCCTGCCGTCAAGTCCGCTTCGTTCTACTACAAGACCGGATTGATATGGTATAGTCTCAAGAACTTCGAACTCGCCTCCAATTGCTTTGAGAGGGCTTCGAATATCGTTTCGAAGATGGATCTCACCGCAGTCGTCGATGCTGGCGCCAAAAAGCCTCTATTGGATCTGAACATCGCTAGCTCACCTGAGCACTACAAAGCGCTTGGAGACGAGTACTTGGCGGTTGGGAAGACCGAACTATCGAAGAGGGAAAATCATGCATTCCGCGAGGCTCTAAAGCTGATGAACGAAGCTCTGGATCTATTCGAGAAAGGTCTGCATGTGGCAAGAGCTAGAGAGGAGATGGTTGAGTTTAAAGTCCTAAGATCCAAGACGCTGAGGTTCATTTCAGCTGTTCATTTGCAGATTGATGAGTTCAAGAATGTGATTAAGTGTGTGAGGCTTTTAAAAGATGGAGATTGCGGCGATAATCATCCAAGCCTGTCGGTTCTGGCTATGAATGCTTGGTTGGGGTTAGGAAGGCATAGGGAGGTCGAGCAAGATCTGCGAGGAATGATTGAGAACAAGGGAATTCCGGAGAGTGCTTGGGTTTCGGCTGTTGAGGCTTACTTCGAGGCGGTGGGAGGGGCTGGAACAGAGACCGCCACGGGAGTGTTCATGGAGCTGAAGCAGGCTTACTTCATTTTTCCGCCGGAAAACAGAGGAGGGAGCTCTCTCTCTCCCTCCCCGTTTCAGATCTGA

Protein sequence

MWSSLQEGKRWFYMSTFDEESRHCGVGAVIRTREGQLVAHANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSKMDLTAVVDAGAKKPLLDLNIASSPEHYKALGDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMELKQAYFIFPPENRGGSSLSPSPFQI

Homology

[Close]

BLAST of Spg023908 vs. NCBI nr
Match: XP_022954031.1 (TPR repeat-containing protein ZIP4 isoform X2 [Cucurbita moschata])

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-107
Identity = 206/271 (76.01%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVS
Sbjct: 120 HANLRHVASDLLYLAGDVDGVPSPAAKSASFYYKTGLIWHSLKNFELASSCFERASDIVS 179

Query: 100 KMDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDE 159
           K+DLT V DAGAKK LLDLNIA                           SPEHYKALGDE
Sbjct: 180 KLDLTMVADAGAKKLLLDLNIARSRTAWQVSDRNLAVVLLSRAKGLMFGSPEHYKALGDE 239

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 240 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 299

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 300 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 359

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWVSAVE YFEAVGGAG ETA GVFM L
Sbjct: 360 PESAWVSAVETYFEAVGGAGAETAMGVFMGL 390

[Close]

BLAST of Spg023908 vs. NCBI nr
Match: XP_022954029.1 (TPR repeat-containing protein ZIP4 isoform X1 [Cucurbita moschata])

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-107
Identity = 206/271 (76.01%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVS
Sbjct: 120 HANLRHVASDLLYLAGDVDGVPSPAAKSASFYYKTGLIWHSLKNFELASSCFERASDIVS 179

Query: 100 KMDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDE 159
           K+DLT V DAGAKK LLDLNIA                           SPEHYKALGDE
Sbjct: 180 KLDLTMVADAGAKKLLLDLNIARSRTAWQVSDRNLAVVLLSRAKGLMFGSPEHYKALGDE 239

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 240 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 299

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 300 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 359

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWVSAVE YFEAVGGAG ETA GVFM L
Sbjct: 360 PESAWVSAVETYFEAVGGAGAETAMGVFMGL 390

[Close]

BLAST of Spg023908 vs. NCBI nr
Match: KAG6576021.1 (TPR repeat-containing protein ZIP4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 398.7 bits (1023), Expect = 4.7e-107
Identity = 205/271 (75.65%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVS
Sbjct: 119 HANLRHVASDLLYLAGDVDGVPSPAAKSASFYYKTGLIWHSLKNFELASSCFERASDIVS 178

Query: 100 KMDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDE 159
           K+DLT V DAGAKK LLDLNIA                           SPEHYKALGDE
Sbjct: 179 KLDLTMVADAGAKKLLLDLNIARSRTAWQVSDRNLAVVLLSRAKGLMFGSPEHYKALGDE 238

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 239 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 298

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 299 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 358

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWV+AVE YFEAVGGAG ETA GVFM L
Sbjct: 359 PESAWVTAVETYFEAVGGAGAETAMGVFMGL 389

[Close]

BLAST of Spg023908 vs. NCBI nr
Match: KAG7014542.1 (TPR repeat-containing protein ZIP4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.7 bits (1023), Expect = 4.7e-107
Identity = 205/271 (75.65%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVS
Sbjct: 143 HANLRHVASDLLYLAGDVDGVPSPAAKSASFYYKTGLIWHSLKNFELASSCFERASDIVS 202

Query: 100 KMDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDE 159
           K+DLT V DAGAKK LLDLNIA                           SPEHYKALGDE
Sbjct: 203 KLDLTMVADAGAKKLLLDLNIARSRTAWQVSDRNLAVVLLSRAKGLMFGSPEHYKALGDE 262

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 263 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 322

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 323 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 382

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWV+AVE YFEAVGGAG ETA GVFM L
Sbjct: 383 PESAWVTAVETYFEAVGGAGAETAMGVFMGL 413

[Close]

BLAST of Spg023908 vs. NCBI nr
Match: XP_023548601.1 (TPR repeat-containing protein ZIP4 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.8e-106
Identity = 204/271 (75.28%), Postives = 222/271 (81.92%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LY+A DV+ VP+PA KSASFYYKTGLIW++LKNFELAS CFERAS+IVS
Sbjct: 117 HANLRHVASDLLYIAGDVDGVPSPAAKSASFYYKTGLIWHTLKNFELASICFERASDIVS 176

Query: 100 KMDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDE 159
           K+DLT V DAGAKK LLDLNIA                           SPEHYKALGDE
Sbjct: 177 KLDLTTVADAGAKKLLLDLNIARSRTAWQVSDRNLAVVLLSRAKGLMFGSPEHYKALGDE 236

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 237 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 296

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 297 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 356

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWVSAVE YFEAVGGAG ETA GVFM L
Sbjct: 357 PESAWVSAVETYFEAVGGAGAETAMGVFMGL 387

[Close]

BLAST of Spg023908 vs. ExPASy Swiss-Prot
Match: B0M1H3 (TPR repeat-containing protein ZIP4 OS=Arabidopsis thaliana OX=3702 GN=ZIP4 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-77
Identity = 153/275 (55.64%), Postives = 194/275 (70.55%), Query Frame = 0


Query: 41  ANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSK 100
           ANLRHV +D+L+LA DV  VP+P +KS+ FYYKTGL+++SLK F+LAS+CFERA+ IVSK
Sbjct: 107 ANLRHVAADMLFLAKDVTGVPSPTIKSSLFYYKTGLVYHSLKKFDLASDCFERATEIVSK 166

Query: 101 MDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDEY 160
           +D+  + DAG KK  LDLN+A                           SP+HYK+L +++
Sbjct: 167 IDIAKISDAGEKKLFLDLNLARSRTAWEISDRNLAVTLLNRAKNLLFGSPDHYKSLSNQF 226

Query: 161 LAVGKTELSKRENH-AFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 220
           LA GK+ LS+ ++  +  +AL+LMNEALDL EKGL  A+ RE+  EF  +R KTLRFISA
Sbjct: 227 LAFGKSSLSRGDDDCSLNDALRLMNEALDLCEKGLGTAKTREDTTEFTAMRIKTLRFISA 286

Query: 221 VHLQIDEFKNVIKCVRLLKDG----DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIE 280
           VHLQ  EF+NVIKCV++L++G    D  D H SL VLAM AWLGLGRH E E++LRGM+ 
Sbjct: 287 VHLQKGEFENVIKCVKVLRNGGNGSDGADQHASLPVLAMKAWLGLGRHSEAEKELRGMVG 346

Query: 281 NKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           N  IPE+ WVSAVEAYFE VG AG ETA GVF+ L
Sbjct: 347 NNDIPEAVWVSAVEAYFEVVGTAGAETAKGVFLGL 381

[Close]

BLAST of Spg023908 vs. ExPASy Swiss-Prot
Match: A2WXU2 (TPR repeat-containing protein ZIP4 OS=Oryza sativa subsp. indica OX=39946 GN=ZIP4 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.9e-29
Identity = 91/285 (31.93%), Postives = 140/285 (49.12%), Query Frame = 0


Query: 37  LVAHANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASN 96
           L   A +R    ++L LA   N VP+ A K ASF++++GL W  L   +LAS CFE+A+ 
Sbjct: 98  LAVEAEIRQAAPELLLLAGIPNGVPSAAAKVASFFHRSGLAWLDLGRVDLASACFEKATP 157

Query: 97  IVSKMDLTAVVDAGAKKPLLDLNI--------------------------ASSPEHYKAL 156
           +VS     A  D G    LL+LN+                          A+SPE  K+L
Sbjct: 158 LVS---AAATEDRGV---LLELNLARARAASDAGDQALAVALLSRSKPLAAASPEGAKSL 217

Query: 157 GDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVAR----------AREEMVEF 216
              YL++G+  L+ + ++   EA  L  EALDL EK    +           A  +    
Sbjct: 218 AQGYLSIGEATLAAKHSNPAVEASTLFTEALDLCEKAASPSSSSPRTPPYGGATPKTPNL 277

Query: 217 KVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKDG-DCGDNHPSLSVLAMNAWLGLGRHRE 276
           + L+ + LRF++   LQ  +++ V++C+R+ +      + HPS+ V+AM AW+G G   E
Sbjct: 278 EGLKRRCLRFLALERLQAQDYEGVLRCIRVSRASMGLEEEHPSIGVMAMRAWIGSGNMAE 337

Query: 277 VEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
            +++L  ++ N    E+  VSA EAY  A   AG E A  V + L
Sbjct: 338 ADKELERLMANALATENLCVSAAEAYLAA---AGPEAARKVLIAL 373

[Close]

BLAST of Spg023908 vs. ExPASy Swiss-Prot
Match: Q5N829 (TPR repeat-containing protein ZIP4 OS=Oryza sativa subsp. japonica OX=39947 GN=ZIP4 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.9e-29
Identity = 91/285 (31.93%), Postives = 140/285 (49.12%), Query Frame = 0


Query: 37  LVAHANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASN 96
           L   A +R    ++L LA   N VP+ A K ASF++++GL W  L   +LAS CFE+A+ 
Sbjct: 98  LAVEAEIRQAAPELLLLAGIPNGVPSAAAKVASFFHRSGLAWLDLGRVDLASACFEKATP 157

Query: 97  IVSKMDLTAVVDAGAKKPLLDLNI--------------------------ASSPEHYKAL 156
           +VS     A  D G    LL+LN+                          A+SPE  K+L
Sbjct: 158 LVS---AAATEDRGV---LLELNLARARAASDAGDQALAVALLSRSKPLAAASPEGAKSL 217

Query: 157 GDEYLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVAR----------AREEMVEF 216
              YL++G+  L+ + ++   EA  L  EALDL EK    +           A  +    
Sbjct: 218 AQGYLSIGEATLAAKHSNPAVEASTLFTEALDLCEKAASPSSSSPRTPPYGGATPKTPNL 277

Query: 217 KVLRSKTLRFISAVHLQIDEFKNVIKCVRLLKDG-DCGDNHPSLSVLAMNAWLGLGRHRE 276
           + L+ + LRF++   LQ  +++ V++C+R+ +      + HPS+ V+AM AW+G G   E
Sbjct: 278 EGLKRRCLRFLALERLQAQDYEGVLRCIRVSRASMGLEEEHPSIGVMAMRAWIGSGNMAE 337

Query: 277 VEQDLRGMIENKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
            +++L  ++ N    E+  VSA EAY  A   AG E A  V + L
Sbjct: 338 ADKELERLMANALATENLCVSAAEAYLAA---AGPEAARKVLIAL 373

[Close]

BLAST of Spg023908 vs. ExPASy TrEMBL
Match: A0A6J1GPR3 (Protein ZIP4 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456413 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.0e-107
Identity = 206/271 (76.01%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVS
Sbjct: 120 HANLRHVASDLLYLAGDVDGVPSPAAKSASFYYKTGLIWHSLKNFELASSCFERASDIVS 179

Query: 100 KMDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDE 159
           K+DLT V DAGAKK LLDLNIA                           SPEHYKALGDE
Sbjct: 180 KLDLTMVADAGAKKLLLDLNIARSRTAWQVSDRNLAVVLLSRAKGLMFGSPEHYKALGDE 239

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 240 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 299

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 300 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 359

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWVSAVE YFEAVGGAG ETA GVFM L
Sbjct: 360 PESAWVSAVETYFEAVGGAGAETAMGVFMGL 390

[Close]

BLAST of Spg023908 vs. ExPASy TrEMBL
Match: A0A6J1GRN6 (Protein ZIP4 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456413 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.0e-107
Identity = 206/271 (76.01%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVS
Sbjct: 120 HANLRHVASDLLYLAGDVDGVPSPAAKSASFYYKTGLIWHSLKNFELASSCFERASDIVS 179

Query: 100 KMDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDE 159
           K+DLT V DAGAKK LLDLNIA                           SPEHYKALGDE
Sbjct: 180 KLDLTMVADAGAKKLLLDLNIARSRTAWQVSDRNLAVVLLSRAKGLMFGSPEHYKALGDE 239

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 240 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 299

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 300 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 359

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWVSAVE YFEAVGGAG ETA GVFM L
Sbjct: 360 PESAWVSAVETYFEAVGGAGAETAMGVFMGL 390

[Close]

BLAST of Spg023908 vs. ExPASy TrEMBL
Match: A0A6J1JT57 (Protein ZIP4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488108 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.5e-106
Identity = 204/271 (75.28%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVS
Sbjct: 118 HANLRHVASDLLYLAGDVDGVPSPAAKSASFYYKTGLIWHSLKNFELASSCFERASDIVS 177

Query: 100 KMDLTAVVDAGAKKPLLDLNI--------------------------ASSPEHYKALGDE 159
           K+DLT V DAG KK LLDLNI                            SPEHYKALGDE
Sbjct: 178 KLDLTMVADAGTKKLLLDLNIDRSRTAWQVSDRNLALVLLSRAKGLMFGSPEHYKALGDE 237

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 238 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 297

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 298 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 357

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWVSAVE YFEAVGGAG ETA GVFM L
Sbjct: 358 PESAWVSAVETYFEAVGGAGAETAMGVFMGL 388

[Close]

BLAST of Spg023908 vs. ExPASy TrEMBL
Match: A0A6J1JQY9 (Protein ZIP4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488108 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.5e-106
Identity = 204/271 (75.28%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRHV SD+LYLA DV+ VP+PA KSASFYYKTGLIW+SLKNFELAS+CFERAS+IVS
Sbjct: 118 HANLRHVASDLLYLAGDVDGVPSPAAKSASFYYKTGLIWHSLKNFELASSCFERASDIVS 177

Query: 100 KMDLTAVVDAGAKKPLLDLNI--------------------------ASSPEHYKALGDE 159
           K+DLT V DAG KK LLDLNI                            SPEHYKALGDE
Sbjct: 178 KLDLTMVADAGTKKLLLDLNIDRSRTAWQVSDRNLALVLLSRAKGLMFGSPEHYKALGDE 237

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YLA GK ELSK E HAFREALKL+NEALDL+EKGL +ARAREEMVEFK LRSKTLRFISA
Sbjct: 238 YLAFGKIELSKGETHAFREALKLLNEALDLYEKGLRLARAREEMVEFKALRSKTLRFISA 297

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVRLL+DGDCGDNHPSL VLAM AWLGLGRH E E++LRGMIENKGI
Sbjct: 298 VHLQVEEFESVIKCVRLLRDGDCGDNHPSLPVLAMKAWLGLGRHGEAEKELRGMIENKGI 357

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWVSAVE YFEAVGGAG ETA GVFM L
Sbjct: 358 PESAWVSAVETYFEAVGGAGAETAMGVFMGL 388

[Close]

BLAST of Spg023908 vs. ExPASy TrEMBL
Match: A0A1S3B3Z1 (Protein ZIP4 homolog OS=Cucumis melo OX=3656 GN=LOC103485899 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 6.2e-105
Identity = 200/271 (73.80%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 40  HANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVS 99
           HANLRH+ SD+LYLA DV  VP+PAVKSASFYYKTGLIW+ LKNFELAS+CFERAS+IVS
Sbjct: 115 HANLRHIASDLLYLAGDVPGVPSPAVKSASFYYKTGLIWHGLKNFELASSCFERASDIVS 174

Query: 100 KMDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDE 159
           K+DLT+VVD+ AKK LLDLNIA                           SPEHYKALGDE
Sbjct: 175 KIDLTSVVDSDAKKLLLDLNIARARTAWQVSDRNLAMVLLSRAKGLMFGSPEHYKALGDE 234

Query: 160 YLAVGKTELSKRENHAFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 219
           YL+ GK ELSK E  AFREALKLMNEALDLFEKGL VAR RE+M+EFK LRSKTLRFISA
Sbjct: 235 YLSFGKIELSKGETQAFREALKLMNEALDLFEKGLRVARGREDMIEFKALRSKTLRFISA 294

Query: 220 VHLQIDEFKNVIKCVRLLKDGDCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIENKGI 279
           VHLQ++EF++VIKCVR+L+DGDCGDNHPSL VLA+ AWLGLGRH E E++LRGMIENKGI
Sbjct: 295 VHLQVEEFESVIKCVRILRDGDCGDNHPSLPVLALKAWLGLGRHGEAEKELRGMIENKGI 354

Query: 280 PESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           PESAWVSAVE YFEAVGGAG ETA GVFM L
Sbjct: 355 PESAWVSAVETYFEAVGGAGAETAMGVFMGL 385

[Close]

BLAST of Spg023908 vs. TAIR 10
Match: AT5G48390.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 291.6 bits (745), Expect = 7.5e-79
Identity = 153/275 (55.64%), Postives = 194/275 (70.55%), Query Frame = 0


Query: 41  ANLRHVDSDVLYLAVDVNRVPTPAVKSASFYYKTGLIWYSLKNFELASNCFERASNIVSK 100
           ANLRHV +D+L+LA DV  VP+P +KS+ FYYKTGL+++SLK F+LAS+CFERA+ IVSK
Sbjct: 107 ANLRHVAADMLFLAKDVTGVPSPTIKSSLFYYKTGLVYHSLKKFDLASDCFERATEIVSK 166

Query: 101 MDLTAVVDAGAKKPLLDLNIA--------------------------SSPEHYKALGDEY 160
           +D+  + DAG KK  LDLN+A                           SP+HYK+L +++
Sbjct: 167 IDIAKISDAGEKKLFLDLNLARSRTAWEISDRNLAVTLLNRAKNLLFGSPDHYKSLSNQF 226

Query: 161 LAVGKTELSKRENH-AFREALKLMNEALDLFEKGLHVARAREEMVEFKVLRSKTLRFISA 220
           LA GK+ LS+ ++  +  +AL+LMNEALDL EKGL  A+ RE+  EF  +R KTLRFISA
Sbjct: 227 LAFGKSSLSRGDDDCSLNDALRLMNEALDLCEKGLGTAKTREDTTEFTAMRIKTLRFISA 286

Query: 221 VHLQIDEFKNVIKCVRLLKDG----DCGDNHPSLSVLAMNAWLGLGRHREVEQDLRGMIE 280
           VHLQ  EF+NVIKCV++L++G    D  D H SL VLAM AWLGLGRH E E++LRGM+ 
Sbjct: 287 VHLQKGEFENVIKCVKVLRNGGNGSDGADQHASLPVLAMKAWLGLGRHSEAEKELRGMVG 346

Query: 281 NKGIPESAWVSAVEAYFEAVGGAGTETATGVFMEL 285
           N  IPE+ WVSAVEAYFE VG AG ETA GVF+ L
Sbjct: 347 NNDIPEAVWVSAVEAYFEVVGTAGAETAKGVFLGL 381

The following BLAST results are available for this feature:

BLAST of Spg023908 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954031.1	2.1e-107	76.01	TPR repeat-containing protein ZIP4 isoform X2 [Cucurbita moschata]	[more]
XP_022954029.1	2.1e-107	76.01	TPR repeat-containing protein ZIP4 isoform X1 [Cucurbita moschata]	[more]
KAG6576021.1	4.7e-107	75.65	TPR repeat-containing protein ZIP4, partial [Cucurbita argyrosperma subsp. soror...	[more]
KAG7014542.1	4.7e-107	75.65	TPR repeat-containing protein ZIP4, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_023548601.1	1.8e-106	75.28	TPR repeat-containing protein ZIP4 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg023908 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0M1H3	1.1e-77	55.64	TPR repeat-containing protein ZIP4 OS=Arabidopsis thaliana OX=3702 GN=ZIP4 PE=2 ...	[more]
A2WXU2	6.9e-29	31.93	TPR repeat-containing protein ZIP4 OS=Oryza sativa subsp. indica OX=39946 GN=ZIP...	[more]
Q5N829	6.9e-29	31.93	TPR repeat-containing protein ZIP4 OS=Oryza sativa subsp. japonica OX=39947 GN=Z...	[more]

BLAST of Spg023908 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPR3	1.0e-107	76.01	Protein ZIP4 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456413 PE=4 SV=1	[more]
A0A6J1GRN6	1.0e-107	76.01	Protein ZIP4 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456413 PE=4 SV=1	[more]
A0A6J1JT57	1.5e-106	75.28	Protein ZIP4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488108 PE=4 SV=1	[more]
A0A6J1JQY9	1.5e-106	75.28	Protein ZIP4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488108 PE=4 SV=1	[more]
A0A1S3B3Z1	6.2e-105	73.80	Protein ZIP4 homolog OS=Cucumis melo OX=3656 GN=LOC103485899 PE=4 SV=1	[more]

BLAST of Spg023908 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48390.1	7.5e-79	55.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013940	Meiosis specific protein Spo22/ZIP4/TEX11	PFAM	PF08631	SPO22	coord: 123..284 e-value: 7.1E-21 score: 74.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 53..270 e-value: 5.3E-6 score: 27.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 66..167
None	No IPR available	PANTHER	PTHR31791:SF8	TPR REPEAT-CONTAINING PROTEIN ZIP4	coord: 37..286
None	No IPR available	PANTHER	PTHR31791	FRIGIDA-LIKE PROTEIN 3-RELATED	coord: 37..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023908.1	Spg023908.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051321	meiotic cell cycle
cellular_component	GO:0005694	chromosome
molecular_function	GO:0005515	protein binding