Spg023881 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTGATAGATTTCGTTTAACCAGAGTTTATCAGCAATAGACACTAATAGATTTCGAATAATTGGAGTCTATACGGCAAATTCTCTTGAATTAACTACCTGATTATGAAAATGACCCAATGGCCAATTTGACAATAAATTAATGCTCAAATACAAAAATAATATTGTTGAAGATAAGCAAATTGGGTCCCAAAATTTTATAATCTGCCGAGTTTTTCGTTTTTTTTTTTTTTTTTTTGAAATCCATTTAAAAACTCTTTGATTTTCGTAAGCATATTTCTAAAGCTTGAAGACCAGACTCTTTCAAGACCTCCAATCGCAATGGCAATGGCAGGCACTAATTGCAGATCTCCTCCTCTTGCCCTAAAATCTCTTCCATCTCTTCAAACTAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACGCTCACCGTCCAAATCACATCTTCTATAAAGAACAATCTGGTTAGTCTGTGTGTGTGTGTGTGTTTGTGTGTAGATTTCTTAAATCAGATCATTGTTCTTACAGTCTGGTTGATTTTGGTAGGTTTTCGAGGATCGTACCAATGGTGTGATTTGCTACAGAGATGACGATGGAGAGATTATATGCGAAGGATATGACGACGAAGAGCCTCGTATCGAGGAAGAGATCGAGAAATTACCTTGTGAAAAATCTTACGGAAGGTAGAAACGTGATCTGGATTAATTCTGGACTGGATCGAGATGTATCGTGATGGCTTTTCTTTTGTTCTGATTCTTGTTTTTCCTATCTGCGAAGTTTCAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAGTGTTGGGAGAAGCGCTTAGAAACCGTTAATGGCGGTGGTGGAAGTGGAAGAGAAGACCTTCGAATCGGAGCGAATGGCTTCAGTTTGTAGTTATGGCTTTGAGCTCTGTAAAAATGAAAAAAAGGGGAAATTTGAGATTTCCTTCTTAGGGATTTGAATAATTTTAGCTGTGTTTATAGGTAGATTTAGATTATAAATATAGCATATAATAAATTGTAAAAACGAATTTTTCAATCATCAATCATGTAAATTACTTATGAGTAAAAACAAAATTGCTCGGG ATGGCAATGGCAGGCACTAATTGCAGATCTCCTCCTCTTGCCCTAAAATCTCTTCCATCTCTTCAAACTAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACGCTCACCGTCCAAATCACATCTTCTATAAAGAACAATCTGGTTTTCGAGGATCGTACCAATGGTGTGATTTGCTACAGAGATGACGATGGAGAGATTATATGCGAAGGATATGACGACGAAGAGCCTCGTATCGAGGAAGAGATCGAGAAATTACCTTGTGAAAAATCTTACGGAAGTTTCAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAGTGTTGGGAGAAGCGCTTAGAAACCGTTAATGGCGGTGGTGGAAGTGGAAGAGAAGACCTTCGAATCGGAGCGAATGGCTTCAGTTTGTAG ATGGCAATGGCAGGCACTAATTGCAGATCTCCTCCTCTTGCCCTAAAATCTCTTCCATCTCTTCAAACTAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACGCTCACCGTCCAAATCACATCTTCTATAAAGAACAATCTGGTTTTCGAGGATCGTACCAATGGTGTGATTTGCTACAGAGATGACGATGGAGAGATTATATGCGAAGGATATGACGACGAAGAGCCTCGTATCGAGGAAGAGATCGAGAAATTACCTTGTGAAAAATCTTACGGAAGTTTCAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAGTGTTGGGAGAAGCGCTTAGAAACCGTTAATGGCGGTGGTGGAAGTGGAAGAGAAGACCTTCGAATCGGAGCGAATGGCTTCAGTTTGTAG MAMAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDRTNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWEKRLETVNGGGGSGREDLRIGANGFSL Homology
BLAST of Spg023881 vs. NCBI nr
Match: XP_022980749.1 (uncharacterized protein LOC111480023 [Cucurbita maxima]) HSP 1 Score: 237.3 bits (604), Expect = 8.5e-59 Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Spg023881 vs. NCBI nr
Match: XP_022956325.1 (uncharacterized protein LOC111458058 [Cucurbita moschata] >KAG6581790.1 hypothetical protein SDJN03_21792, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 236.1 bits (601), Expect = 1.9e-58 Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Spg023881 vs. NCBI nr
Match: KAG7018241.1 (hypothetical protein SDJN02_20109 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 234.6 bits (597), Expect = 5.5e-58 Identity = 119/146 (81.51%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Spg023881 vs. NCBI nr
Match: XP_023526222.1 (uncharacterized protein LOC111789773 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.0 bits (580), Expect = 5.2e-56 Identity = 118/148 (79.73%), Postives = 129/148 (87.16%), Query Frame = 0
BLAST of Spg023881 vs. NCBI nr
Match: XP_038900432.1 (uncharacterized protein LOC120087657 [Benincasa hispida]) HSP 1 Score: 219.2 bits (557), Expect = 2.4e-53 Identity = 114/145 (78.62%), Postives = 127/145 (87.59%), Query Frame = 0
BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A6J1J044 (uncharacterized protein LOC111480023 OS=Cucurbita maxima OX=3661 GN=LOC111480023 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59 Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A6J1GXI0 (uncharacterized protein LOC111458058 OS=Cucurbita moschata OX=3662 GN=LOC111458058 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 9.2e-59 Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A5D3D6I4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00800 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 7.5e-53 Identity = 110/144 (76.39%), Postives = 124/144 (86.11%), Query Frame = 0
BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A1S3CC94 (uncharacterized protein LOC103499196 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499196 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 7.5e-53 Identity = 110/144 (76.39%), Postives = 124/144 (86.11%), Query Frame = 0
BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A1S3CCR0 (uncharacterized protein LOC103499196 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499196 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.7e-52 Identity = 109/144 (75.69%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of Spg023881 vs. TAIR 10
Match: AT3G14280.1 (unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|