Spg023881 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023881
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold13: 813745 .. 814872 (-)
RNA-Seq ExpressionSpg023881
SyntenySpg023881
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTGATAGATTTCGTTTAACCAGAGTTTATCAGCAATAGACACTAATAGATTTCGAATAATTGGAGTCTATACGGCAAATTCTCTTGAATTAACTACCTGATTATGAAAATGACCCAATGGCCAATTTGACAATAAATTAATGCTCAAATACAAAAATAATATTGTTGAAGATAAGCAAATTGGGTCCCAAAATTTTATAATCTGCCGAGTTTTTCGTTTTTTTTTTTTTTTTTTTGAAATCCATTTAAAAACTCTTTGATTTTCGTAAGCATATTTCTAAAGCTTGAAGACCAGACTCTTTCAAGACCTCCAATCGCAATGGCAATGGCAGGCACTAATTGCAGATCTCCTCCTCTTGCCCTAAAATCTCTTCCATCTCTTCAAACTAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACGCTCACCGTCCAAATCACATCTTCTATAAAGAACAATCTGGTTAGTCTGTGTGTGTGTGTGTGTTTGTGTGTAGATTTCTTAAATCAGATCATTGTTCTTACAGTCTGGTTGATTTTGGTAGGTTTTCGAGGATCGTACCAATGGTGTGATTTGCTACAGAGATGACGATGGAGAGATTATATGCGAAGGATATGACGACGAAGAGCCTCGTATCGAGGAAGAGATCGAGAAATTACCTTGTGAAAAATCTTACGGAAGGTAGAAACGTGATCTGGATTAATTCTGGACTGGATCGAGATGTATCGTGATGGCTTTTCTTTTGTTCTGATTCTTGTTTTTCCTATCTGCGAAGTTTCAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAGTGTTGGGAGAAGCGCTTAGAAACCGTTAATGGCGGTGGTGGAAGTGGAAGAGAAGACCTTCGAATCGGAGCGAATGGCTTCAGTTTGTAGTTATGGCTTTGAGCTCTGTAAAAATGAAAAAAAGGGGAAATTTGAGATTTCCTTCTTAGGGATTTGAATAATTTTAGCTGTGTTTATAGGTAGATTTAGATTATAAATATAGCATATAATAAATTGTAAAAACGAATTTTTCAATCATCAATCATGTAAATTACTTATGAGTAAAAACAAAATTGCTCGGG

mRNA sequence

ATGGCAATGGCAGGCACTAATTGCAGATCTCCTCCTCTTGCCCTAAAATCTCTTCCATCTCTTCAAACTAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACGCTCACCGTCCAAATCACATCTTCTATAAAGAACAATCTGGTTTTCGAGGATCGTACCAATGGTGTGATTTGCTACAGAGATGACGATGGAGAGATTATATGCGAAGGATATGACGACGAAGAGCCTCGTATCGAGGAAGAGATCGAGAAATTACCTTGTGAAAAATCTTACGGAAGTTTCAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAGTGTTGGGAGAAGCGCTTAGAAACCGTTAATGGCGGTGGTGGAAGTGGAAGAGAAGACCTTCGAATCGGAGCGAATGGCTTCAGTTTGTAG

Coding sequence (CDS)

ATGGCAATGGCAGGCACTAATTGCAGATCTCCTCCTCTTGCCCTAAAATCTCTTCCATCTCTTCAAACTAAACCTCTGAGCAAAATTTTTATGCTCAAACCTGCAAAAATTTCAGTCAACAGAACGCTCACCGTCCAAATCACATCTTCTATAAAGAACAATCTGGTTTTCGAGGATCGTACCAATGGTGTGATTTGCTACAGAGATGACGATGGAGAGATTATATGCGAAGGATATGACGACGAAGAGCCTCGTATCGAGGAAGAGATCGAGAAATTACCTTGTGAAAAATCTTACGGAAGTTTCAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTGCAGCAGTGTTGGGAGAAGCGCTTAGAAACCGTTAATGGCGGTGGTGGAAGTGGAAGAGAAGACCTTCGAATCGGAGCGAATGGCTTCAGTTTGTAG

Protein sequence

MAMAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDRTNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWEKRLETVNGGGGSGREDLRIGANGFSL
Homology
BLAST of Spg023881 vs. NCBI nr
Match: XP_022980749.1 (uncharacterized protein LOC111480023 [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 8.5e-59
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0

Query: 1   MAMAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDR 60
           MAM GTNCRSPP AL S  SLQTKPLS++FMLKPAK S+NRTLT+QIT S+KNN+VFEDR
Sbjct: 3   MAMTGTNCRSPPFALNSATSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDR 62

Query: 61  TNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWE 120
           +NGVICYRDDDGEIICEGYDDEEPRIE+EIEKLPCEKS    RSDGELKIDRLLLQQ WE
Sbjct: 63  SNGVICYRDDDGEIICEGYDDEEPRIEQEIEKLPCEKS--RRRSDGELKIDRLLLQQNWE 122

Query: 121 KRLETVNGGGGSGREDLRIGANGFSL 147
           K LET+NGG GSGR +LRI ANGFSL
Sbjct: 123 KSLETINGGAGSGRGELRIRANGFSL 146

BLAST of Spg023881 vs. NCBI nr
Match: XP_022956325.1 (uncharacterized protein LOC111458058 [Cucurbita moschata] >KAG6581790.1 hypothetical protein SDJN03_21792, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.1 bits (601), Expect = 1.9e-58
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0

Query: 1   MAMAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDR 60
           MAM GTNCRSPP AL S+ SLQTKPLS++FMLKPAK S+NRTLT+QIT S+KNN+VFEDR
Sbjct: 3   MAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDR 62

Query: 61  TNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWE 120
           +NGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKS    RSDGELKIDRLLLQQ WE
Sbjct: 63  SNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKS--RRRSDGELKIDRLLLQQNWE 122

Query: 121 KRLETVNGGGGSGREDLRIGANGFSL 147
           K LET+NGG GSGR +LRI ANG SL
Sbjct: 123 KSLETINGGAGSGRGELRIRANGCSL 146

BLAST of Spg023881 vs. NCBI nr
Match: KAG7018241.1 (hypothetical protein SDJN02_20109 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234.6 bits (597), Expect = 5.5e-58
Identity = 119/146 (81.51%), Postives = 130/146 (89.04%), Query Frame = 0

Query: 1   MAMAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDR 60
           MAM GTNCRSPP AL S+ SLQTKPLS++FMLKPAK S+NRTLT+QIT S+KNN+VFEDR
Sbjct: 3   MAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDR 62

Query: 61  TNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWE 120
           +NGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKS    RS+GELKIDRLLLQQ WE
Sbjct: 63  SNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKS--RRRSEGELKIDRLLLQQNWE 122

Query: 121 KRLETVNGGGGSGREDLRIGANGFSL 147
           K LET+NGG GSGR +LRI ANG SL
Sbjct: 123 KSLETINGGAGSGRGELRIRANGCSL 146

BLAST of Spg023881 vs. NCBI nr
Match: XP_023526222.1 (uncharacterized protein LOC111789773 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 5.2e-56
Identity = 118/148 (79.73%), Postives = 129/148 (87.16%), Query Frame = 0

Query: 1   MAMAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDR 60
           MAM GTNCRSPP AL S+ SLQTKPLS++FMLKPAK S+NRT T+QIT S+KNN+VFEDR
Sbjct: 3   MAMIGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTFTLQITCSLKNNVVFEDR 62

Query: 61  TNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWE 120
           +NGVICYRDDDGEIICEGYDDEEPRIE+EIEKLPCEKS    RSDGELKIDRLLLQQ WE
Sbjct: 63  SNGVICYRDDDGEIICEGYDDEEPRIEQEIEKLPCEKS--RRRSDGELKIDRLLLQQNWE 122

Query: 121 KRLETVNG--GGGSGREDLRIGANGFSL 147
           K LET+NG  G GSGR +LRI ANG SL
Sbjct: 123 KSLETINGGAGSGSGRGELRIRANGCSL 148

BLAST of Spg023881 vs. NCBI nr
Match: XP_038900432.1 (uncharacterized protein LOC120087657 [Benincasa hispida])

HSP 1 Score: 219.2 bits (557), Expect = 2.4e-53
Identity = 114/145 (78.62%), Postives = 127/145 (87.59%), Query Frame = 0

Query: 3   MAGTNCRSPPLALKSLPSLQTKPLSKIFML-KPAKISVNRTLTVQITSSIKNNLVFEDRT 62
           MA TNCRSP L  KS+ SLQTKPLSK FML KPAK+SVNRTLT+QITSS+KNNLVFEDR+
Sbjct: 1   MAATNCRSPLLPRKSITSLQTKPLSKTFMLFKPAKVSVNRTLTLQITSSVKNNLVFEDRS 60

Query: 63  NGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWEK 122
           NGVICYRD+DGEIICEGYDDE+PRIE+EIEKLPCEKS    RSD E ++DRLLLQQ WEK
Sbjct: 61  NGVICYRDEDGEIICEGYDDEKPRIEQEIEKLPCEKSRRR-RSDRESEMDRLLLQQNWEK 120

Query: 123 RLETVNGGGGSGREDLRIGANGFSL 147
           RLE +NGG GSGR +LRI ANG+SL
Sbjct: 121 RLEAINGGAGSGRGELRIRANGYSL 144

BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A6J1J044 (uncharacterized protein LOC111480023 OS=Cucurbita maxima OX=3661 GN=LOC111480023 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0

Query: 1   MAMAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDR 60
           MAM GTNCRSPP AL S  SLQTKPLS++FMLKPAK S+NRTLT+QIT S+KNN+VFEDR
Sbjct: 3   MAMTGTNCRSPPFALNSATSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDR 62

Query: 61  TNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWE 120
           +NGVICYRDDDGEIICEGYDDEEPRIE+EIEKLPCEKS    RSDGELKIDRLLLQQ WE
Sbjct: 63  SNGVICYRDDDGEIICEGYDDEEPRIEQEIEKLPCEKS--RRRSDGELKIDRLLLQQNWE 122

Query: 121 KRLETVNGGGGSGREDLRIGANGFSL 147
           K LET+NGG GSGR +LRI ANGFSL
Sbjct: 123 KSLETINGGAGSGRGELRIRANGFSL 146

BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A6J1GXI0 (uncharacterized protein LOC111458058 OS=Cucurbita moschata OX=3662 GN=LOC111458058 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.2e-59
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 0

Query: 1   MAMAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDR 60
           MAM GTNCRSPP AL S+ SLQTKPLS++FMLKPAK S+NRTLT+QIT S+KNN+VFEDR
Sbjct: 3   MAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDR 62

Query: 61  TNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWE 120
           +NGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKS    RSDGELKIDRLLLQQ WE
Sbjct: 63  SNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKS--RRRSDGELKIDRLLLQQNWE 122

Query: 121 KRLETVNGGGGSGREDLRIGANGFSL 147
           K LET+NGG GSGR +LRI ANG SL
Sbjct: 123 KSLETINGGAGSGRGELRIRANGCSL 146

BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A5D3D6I4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00800 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.5e-53
Identity = 110/144 (76.39%), Postives = 124/144 (86.11%), Query Frame = 0

Query: 3   MAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDRTN 62
           MA TN RSP L LKS  SLQTKPL+ +FMLKP KISVNRTLT+QITS +KNNLVFEDR+N
Sbjct: 1   MAATNHRSPLLPLKSFTSLQTKPLTNLFMLKPPKISVNRTLTLQITSCLKNNLVFEDRSN 60

Query: 63  GVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWEKR 122
           GVICYRDDDGEIICEGYDDEE  IEEE+EKLPCEKS G  R DGE+K DRLLLQ  WEK+
Sbjct: 61  GVICYRDDDGEIICEGYDDEEIHIEEEMEKLPCEKSDG--RRDGEMKTDRLLLQTIWEKQ 120

Query: 123 LETVNGGGGSGREDLRIGANGFSL 147
           LE++NGGGGSGR ++ IGANG++L
Sbjct: 121 LESINGGGGSGRGEIPIGANGYNL 142

BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A1S3CC94 (uncharacterized protein LOC103499196 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499196 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.5e-53
Identity = 110/144 (76.39%), Postives = 124/144 (86.11%), Query Frame = 0

Query: 3   MAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDRTN 62
           MA TN RSP L LKS  SLQTKPL+ +FMLKP KISVNRTLT+QITS +KNNLVFEDR+N
Sbjct: 1   MAATNHRSPLLPLKSFTSLQTKPLTNLFMLKPPKISVNRTLTLQITSCLKNNLVFEDRSN 60

Query: 63  GVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWEKR 122
           GVICYRDDDGEIICEGYDDEE  IEEE+EKLPCEKS G  R DGE+K DRLLLQ  WEK+
Sbjct: 61  GVICYRDDDGEIICEGYDDEEIHIEEEMEKLPCEKSDG--RRDGEMKTDRLLLQTIWEKQ 120

Query: 123 LETVNGGGGSGREDLRIGANGFSL 147
           LE++NGGGGSGR ++ IGANG++L
Sbjct: 121 LESINGGGGSGRGEIPIGANGYNL 142

BLAST of Spg023881 vs. ExPASy TrEMBL
Match: A0A1S3CCR0 (uncharacterized protein LOC103499196 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499196 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.7e-52
Identity = 109/144 (75.69%), Postives = 123/144 (85.42%), Query Frame = 0

Query: 3   MAGTNCRSPPLALKSLPSLQTKPLSKIFMLKPAKISVNRTLTVQITSSIKNNLVFEDRTN 62
           MA TN RSP L LKS  SLQTKPL+ +FMLKP KISVNRTLT+QITS +KNNLVFEDR+N
Sbjct: 1   MAATNHRSPLLPLKSFTSLQTKPLTNLFMLKPPKISVNRTLTLQITSCLKNNLVFEDRSN 60

Query: 63  GVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSYGSFRSDGELKIDRLLLQQCWEKR 122
           GVICYRDDDGEIICEGYDDEE  IEEE+EKLPCEKS G    DGE+K DRLLLQ  WEK+
Sbjct: 61  GVICYRDDDGEIICEGYDDEEIHIEEEMEKLPCEKSDG---RDGEMKTDRLLLQTIWEKQ 120

Query: 123 LETVNGGGGSGREDLRIGANGFSL 147
           LE++NGGGGSGR ++ IGANG++L
Sbjct: 121 LESINGGGGSGRGEIPIGANGYNL 141

BLAST of Spg023881 vs. TAIR 10
Match: AT3G14280.1 (unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 27 SKIFMLKPAKISVN-RTLTVQITSSIK---NNLVFEDRTNGVICYRDDDGEIICEGYDDE 86
          +K  ML+ +++ V  +  TV     I+    N+VFED   G+ICY DD+GE+ICEGY DE
Sbjct: 23 AKTLMLQQSQVHVKVKKATVSQPQPIRYSTKNIVFEDPIQGIICYTDDNGEVICEGY-DE 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022980749.18.5e-5982.19uncharacterized protein LOC111480023 [Cucurbita maxima][more]
XP_022956325.11.9e-5882.19uncharacterized protein LOC111458058 [Cucurbita moschata] >KAG6581790.1 hypothet... [more]
KAG7018241.15.5e-5881.51hypothetical protein SDJN02_20109 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023526222.15.2e-5679.73uncharacterized protein LOC111789773 [Cucurbita pepo subsp. pepo][more]
XP_038900432.12.4e-5378.62uncharacterized protein LOC120087657 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1J0444.1e-5982.19uncharacterized protein LOC111480023 OS=Cucurbita maxima OX=3661 GN=LOC111480023... [more]
A0A6J1GXI09.2e-5982.19uncharacterized protein LOC111458058 OS=Cucurbita moschata OX=3662 GN=LOC1114580... [more]
A0A5D3D6I47.5e-5376.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CC947.5e-5376.39uncharacterized protein LOC103499196 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CCR03.7e-5275.69uncharacterized protein LOC103499196 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
AT3G14280.11.4e-0646.03unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34206:SF1OS06G0193300 PROTEINcoord: 1..126
NoneNo IPR availablePANTHERPTHR34206OS06G0193300 PROTEINcoord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023881.1Spg023881.1mRNA