Spg023873 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023873
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotransposon gag protein
Location	scaffold13: 5950173 .. 5958697 (+)
RNA-Seq Expression	Spg023873
Synteny	Spg023873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTCGCGTCTCTCTCCCGATTCTTTGTGACGATAACCCACGCGTTTGGCAGCGATCTAAGGCAAACCAGTGCAACGACAAACCCACTTGAGAGAGACGAGACAAACCCACGACAAACTTCGCCGGAAAAGACGACTCAATCACAAATCACTGCCTTGCTCGCGCCGTCATCGTCGCTCAGAGCTCTCAGACCAAACCCATTTTTCTCGTCCCTTCGCAACTCCCGACTTTTCACCTTCGCGTTCCGTCTCCCTCTCGCCCAGATCTCATGGTTTTGGTGTGCTGCAATCTAGAGAGAGAAGAAATCGGAGTCTCCACGAGTTTCCAAAATCGAAATCCGGTCGGAAATAAATGTTGTAGCGGGCTGGGCTAGGGCAGAATGATCTCGCCGAGAGAGAAGAAATCGAGTTGGGCTAAGACAAATGAACGGCTGTCGGACGCAGATCTCGTCGAGAGAGAATAAATCGGGCTGGAGAGAAAGAGAGGGACAATGAGGGAGAAGGAGATGGTGAGGGAAAGATAAAGAAAGAAAGAAAGAAAGAGGAAGGAAAAAAAACACGAAAAAATCGTCACCACCGACGACGACGGTCGACAGCCGCCAGTGGCTTCCGGTGACAGTAGCTGTAGGGGTTAAGAAGAATAAGTCGTAGGGTAAGGTTAAGAAGAAGATGATGAAATAATAAAATAATAATATAATAATATTTTTTTATTATTAATAATTTATTTCTATTTTAAAAAATTCAAAAATAATTTTTTTAATAAAAAAATTTGTGTCACGTCAGCATTCCGTTAATTATTAACAGAAAATTGGATGGAGGGACCAAAATGAAACTAAAACCAAACCTCAGGGACTAAATTGTTGAGTTTGAAAACTCAGGGACCAAAATGAAACCTAACCCAAACCTCAGGGACTAAAAGTGTATTTTTCCCAAAAAAAAAGCAGATCTTCTCTCATAAACAAAATCTATTTCAAATCCAACCACGTTTTCTAAACTCGTTCTTTTTCTATCAATGAAATATATTTAAAATTTAACAAAATTCTCTATATTAAAATATGGGAAAAATACATTTTTAGTCCATGAGGTTTGAGTTAGGTTTCATTTTGGTCCCTGAGTTTTCAAACTCAACAATTTAGTTCCTAAGGTTTGGTTTTAGTTTCATTTTGGTCCCTCCGTCCAATTTTCCATTAATAGTTAACGGATTGCTGACGTGGTGATATTTTTTTATTATAAAAAATTATTTTTTTATTTTTTAAAACTAAAATATATTTGTTGAATGAGAAATTTCGGTCAATCACAAATTGTCACGTCATTAATTTAAATCAATGATAAAATAAATTTGGAACCAATTACAAATTTACATGTGTCCCTAAGTTAAATTAATAGACATCAAAAATTGGCAAATCAAATAGTGCCACTTGTCTATTATTGATCCATCGGATGACATAAGTCAAGTCTAATCAAATAATGCCACGTGGCAATTGGACCTGAGACTAATGTAACCCGAGATCATTGAAGAAATTGGGCTAAATTAAAATAATCCAGCTTTATTAAAAATGGGTTGGATTAAAGCCCAAATATAGCTCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTTTGGGAGGAGGGAGATTCAGAAACAGAGTCAGAGAACTCAGAGTCTAGAGCATTCTGCCAGAGTCCAGAGTCGTCAGAAGCCAAAGAGTCAAGAGAATTCAGAAGGATTCGAGATTCAGAATTCAAAGGATTCAAGACTCAGAAGGTTTGAAGACTAGAAGACTCTAAGAAGAGATCAACAAGCCAACCGACTGATCAAGAAGATCAACAAGTCAGCAGGTCGATCATCCAAGAAGATCAACAAGCCAATCGACCGATCAAGAGGATCAACAAGTCAGCAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACATATCATCAAGCCAACAGGCCGATCCAAAAGAACGTCGAGCCAGCAGGCCGATCATCCAAGAAGATTAACAAGTCACAACAGGCCGATCCAAAAGATCATTAAGCCAATAGGCCGATTATCCAAGAAGATCAACAAGCCAACAGGCCGATCTAAGAGATCATCAAACCAATAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCTGATCATCCAAGAAGCCCAACAAACCGGCCCAAGAAGAGCAACAAGCTAGAGGCCAAAGTTTATATATTTGTGAGAAAGAATCAGAGGATAAATATTAGAGATTGTACACTTCTACATACAAATTCAATAAAATCAAGTTCATTTCCACGAATTAAATTTCCTTTGTCGAAATCTCGTGTGAACAAATTGGCACGCCCGGTGGGACAGTCTCTACCTCTCATCTCTTTTTCTCGCAAAGAAATCATGACTTCCGAAGAAGCTTCTTCAAAGATCGCTGCTTCAAGCAACTCCTATGTGGGGCCAATTACTCGTAGTCGCTCCAAGAAAACCCAACACGAAGACAACCAAACTCTTGTCATTGCAAACAAGATGCTGAGACGCATGACAAAATCTGCTCAACTTGAAATCGCCACTGCAGAAAATCTGATGCTTGGAAAATTCATCTCTCTTTCTCAGCAACTAAATGAAACATTGAGTCTTGACGTAATGTCTGTTATGATGACTGATGCAGGAACTAGTGAAGAATGGATGGCTGAAGTTGAGAAGAAAATTAGCATGTTACTGAAAATGGTTGAAGAGAAAGACAACGAAATTGCCTCTCTCAAAAGCCAAATGGACAGTCGGGATGCTGTTGAATCAAGTCAGACCCCTGCCATCAAAGACAAGGGAAAGACCACTATACAAGATCAATCACAACACTTCGCTTCTATTGCTTCACTGTCTGTACAACAACTTCAGGATATGATCATGAATTCTATCAGCGCTCAATATGGTGGACCGACTCAGAACTATCTCTTGTATTCCAAGCCGTATACCAAGAGAATCGACAATCTGAGAATGCCTAACGGATACCAGCCACCAAAGTTTCAACAATTCGATGGGAAGGGCAATCCCAAGCAGCACGTTGCTCATTTCGTCGAGACATGTGAAAACGCTGGTACTAAAGGAGACCTACTGGTCAAGCAGTTCGTACGAACACTGAAGGGAAATGCTTTCGACTGGTATACCGACCTTGAGCCTGAGACTATTGATAATTGGGAACAACTTGAGAAGGAGTTCCTTAACCGCTTCTACAGCACAAGGCGAACCGTCAGCATGATAGAGCTCACCAATGCCAAACAACGAAAAGGTGAACCAGTTGTTGACTACATCAATCGTTGGAGAGCTCTAAGCCTAGACTGCAAGGACCGACTCACCGAAGTGTCTTCTGTTGAAATGTGCATCCAAGGCATGCATTGGGGACTTCTATATATTCTACAAGGAATAAAACCTCGTACTTTCGAAGAATTAGCAACACGCGCCCACGATATGGAGTTAAGTATTGCTAGTCGAGGAGATGAAGACCTTCTACTCTCTAATATGAAGAAAGACGAAGAGAACGTTGAAGCAACTATAGAAGAATCTATGGTTGTAAATACAACCCCTCCCGAGTTGTCTTCTAAAGAAAAACACAAGAAGATTGAAAAGCAACAAGGAAATGAAAGGTGTCGCTTGACTTTGAAGGAAAGACAGAAAAAGGTCTATCCTTTTCCTAATTCCGACGTCCCTAACATGTTAGAACAACTACTGAAAACATGGTTGATAGAACTTCCCAAGTGCAAACGACCAGAAGAGATTGAAAAGGTCGATGATCCCAACTACTGCAAGTATCATCGAGTTATCAATCATCCGGTAGAAAAATGTTTTGTCCTGAAAGAGCTAATTCTGAGGTTAGCTAAAGAAGGAAAAATCGAGTTGGATCTTGAGGAAGTAGCTCAATCAAATCATGCTACGACAACAACAAACACTTGCAATCAAATGTGTTTTGATTCACTTCACAGTCAAGAGATGCACCTACTTCAATTTGGAACATTGGAGCCTATAGCTATTTGGTTTCACCATGAGGTATCAGGAGACAAATCTCAAGATACAGTCAATCTTGTCAGCGATGAATGTAAAGGAAGTACTGTCATGACTCGTCAGAAGAAACAAGGACAACATCTTGTTCAGAAAGGATGTTGCTCATCCAAAAGAAAGAATAGACATCGAAGACAGAAGAATTCAAGGAAACCTAAACTTGAGAAAGAAAGAAATCAAGATCTTTCTCAACATCGCCAATTGGTAACCTTCAAAGAATCATCCTCGAGAAATTTTCGTCCCATCAAGAAAATGGAAGAAAATTTTGCAAGTTCATGTTATATCAATGTAGAAGAAGATGGTGCATTGAAGGAAATCAAGCAAAGGACTTCTGTCTTTAATCGCATTGAGCCTTCAACTACTAGACTTTCGGTCTTCCAAAGAATAAGTATGGTTATAGCAGGAGAAGAAGATCAAAGTTTGACGTCCGCCATCACTCGACATTCAGTTTTCCAAAGACTAAGCGTCTCTACATCAAGAAAGTGTCGACCTTCAACAACTGTTTTTGATCGCCTCAAAGTAACAAGCGACCAACATGAAAGAAAGGTGGACAATTCAGAAGTTAAATTGTTCGATGAAATAAACGATGACAATAAGCTTCATAGTACCACGCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAACACAGAAGGTTCTTTGAAGGTGAAACCAAATCTTATCATTTTGACAAATCCTACAAATGAAGGGTCTGATCAAGACTATGATAGAGAAAAAGAAATTTAAAATGTATTGCTCCTTATCGCATGAGCATAAACTGCATGATGCTCCTGGGCCACACGAGCTTAAAAGGTGAATGCGAAAAAAAAATAAAATAAAATAAACTTGAACTACGTTATGACTTGATCCCTTTCCTTCAAGGGTACGTAGGCAGCTTAAAAAAAAAACTTTAAGTTCAGTCCTTGCAAACAAAAAAAAAAGTGTCACAAATATAGAAGCATGACAATACAAGTTAAGGATGCTTCCCCTTACTGGGGGCAACACAGTAAATTGAAGACGTACATTGCTATGAATGGAATGCTACGAATTAAATGCATAAAAGAAGGCTGCGTTCTTTCAAGTTCGACGATTCGCTCGCTCCAAGTCCGGCGTCTCGCCTAGTTCGGTGTCTCGCTCCTTCTATGTTTGCATTCCACACACTTCAAGTTCGGTGTTTCGCTCCTTCAAAGTTTGGAGTCTCACCCCCTTCAAGTTTGGCATCCTACTTCCTCTAAGTTTGCATTCTCCATGCTTCAAGTTTGGTGTTTCGCTCGCTCAAAGTTCGACGTCTCACCCTCTCCATGTTCGGCGATTGCTCCATTCAAGTTTGGCTTATCACTTGTCCCAAGTTTGATACCTTGCTTCACCTTCAAAGGGTGGCAGTTGAAGGCTTCGTTTTCACTTCATCTTCAAATCTTCAAAGGTTGACAGTTGAAAATTTTGCTTCACTACAAATGTTGTCGGTTGAAGACTTCGCTATCACTTCATCTTCAAAATTTGGCGATCTACATCGCTTCATTTTCAAAGGTTGACCATTGACAACTTTGCTTCATCTCCAAAAGATAGCGGTGGAAGGATTCGTTGTCGCTTCATCTTCAAAAGTTGACAGTTGACGACTTCACTTCGTTTTCAAAAGTTGGTAGTTGAGAGCCTTGCTCCATCTTCAAAGATTGACAGTCAACAGCTTTGTTTCATCTTCAAAGGTTGACAGTTGAATGCTTTGCTTTCGCTTCATCCTCAAAAGTTGACGATTGGTGGCCCCGCATCTTCTTCAAAAGTTGACGGTTGGCGACCTCGCTCCTTCTTCAAAGTTGACGGTTGACAACTTCACTTCAAAGTTGGTGGTTGGCGACTTTCACTTCATCTTCAAAAGTTGACGGTTGGCAGTCTCGCTTCTTCTTCAAAGTTGACGGTTGACAACTTCACTTCAAAGTTGGCGGTTGGCGACTTTCACTTCATTTTCAAAAGTTGACGATAGGCAGTCTCGCTTTTTCTTCAAAAATTTACGGTTGACAACTTCACTTCATATTCAAAAGTTGGCGATTAAAGTCTTCGCTTTAGAACATCTGCAAAGATGAACAACTTTAACGTTGACTTTATCTTGAAAGTGTCTAGACTGGAAGATGCATCTTAGCTGCAAGTTAAAAAAAAAATACTTAATATCAAGCAACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAAAGAAAGACAATAAAGGTGTTGTTAAAAAAATGGTGACCACCCCTGCAGGATACTACGGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTATAAGTGAATCTGATGACGACCGTTGTAGGCGAGTCTGGTGACCACCCCTGCAGGATACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGGATCTGATGACGACCGTTGTAGGCGAGTCTAGTGACCACCCCTGCAGGATACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAATCTGATGACGATCACTGCAACAAATCTCGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCAAGTCTGATGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCAATCACTGTAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCGAATCTGGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAAATGGGGACCGGTCTAGCAGGAGTGCATCACTGAAGGCAAGTCTGGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAAATGGGGACCGGTCTAGTAGGAGTGAACCACTGAAGGTAAGTCTGGTGACTGCTCCTGCAGGCTACTCAGATCACCCAATAAATATAGGGACTGGTCTAGCAGGAATGCATCACTGAAGGCAAGTCTGGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAAATGGGTGACTGGTCTAGCAGGAGTAAAGTCACTGCAAGTGAATTTGGAGACGACTGTTGCAGGATGCTTACACATTCAAACAAGAAAAGAAACAAATTGCAATAATATATGTGCAAAAAAAAAAAAAGAGTAGGAAACAAGAAAAAATCTACGGCACAATCAAAGCAGTTCATATGTGCGATATTCAATAAGACACCGATGGAATATATGCATATTTTAAAAAAAATGGAGTTTGAATATGTATATACCATCCAAATGGTGGACAAAAGGTTGATGTTTTTTTTCCCCAGAAGATCGTCAAATAAGTTTGTTAGTCCTAAAAAGAAAGAAAGTTAATTAGCAACAATAAAAAAGGACGGCAAAGCAAGTGCAGCGACAAAACAAGTTAAAAAAAATGAAGGAAGCAGGCGGCGTGAAGAAAAAAAAGAAGAGAAAAAAAAGCATGCAAGTGAAGGAAGGAAGAAAAAGAATAGCATGCGGCAACCCTAGATGTGTGTATATATACATATATATGGGATGTGTGACGGCAATTTGAAACGGAAGTTGAAAAAAAAAAGGGAAGCGAAATACTAACCTTCATGTGTGTGTATATGGCACAATAGTAGCGGCAAATTGATTAAAAAAAAAAGCCACAGCAGAAGCAAACACATGAAATTCATGTATTTTGAAGTTGTGTTTTGAATTTTTAAGTGGCCGACCCAACTCAAAAGCACAGTTATGTGCATTAGTGCAAAAGTTTGAAAATAAAAAGATTTGGCAATTTGAAAGAAAAAAAAACTTGAAAAGGCTTAATAAACAAATGGTGCAATTTAAAAAAAAAAAGCACAAAAGAGATGTGTGCTGGATTAAATGATAAGGCATTAGGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAAAAAAAAGGTGAAGTTGCGGCTTTAAGTAAGAAAGAAAAATAATAATAAACATACATGTTTATTTGTTTTTCTTTCTCTCTTTCCCCGTCATCGTCGATCCTCATCTTCCCATTCTTTTTTTTACGCCTGGTTCAAACCTATTCTTCAACCAAACTCGCCGCCGGTCATTCAACAGCCATAATCTTGCACTCAAGAACAAGTTGGATGCCGCAGCACGTAACGCAGACGACCACCCCGACACCTGCAGCGCACGATTCCACCAGATGCGAGTTTGACTTCTTTGACGGTGCTGATCCACAATCCCTTGACGGTGCAGTACAACACGAACGACGGCCAGATTCGAGCGACCCACCGGCGAGTTCTAGCGGCACAAGCGGCCGTAGTTGGAATCGATGA

mRNA sequence

ATGAACCTCGCGTCTCTCTCCCGATTCTTTGTGACGATAACCCACGCGTTTGGCAGCGATCTAAGGCAAACCAGTGCAACGACAAACCCACTTGAGAGAGACGAGACAAACCCACGACAAACTTCGCCGGAAAAGACGACTCAATCACAAATCACTGCCTTGCTCGCGCCGTCATCGTCGCTCAGAGCTCTCAGACCAAACCCATTTTTCTCGTCCCTTCGCAACTCCCGACTTTTCACCTTCGCGTTCCGTCTCCCTCTCGCCCAGATCTCATGGAGGGAGATTCAGAAACAGAGTCAGAGAACTCAGAGTCTAGAGCATTCTGCCAGAGTCCAGAGTCGTCAGAAGCCAAAGAGTCAAGAGAATTCAGAAGGATTCGAGATTCAGAATTCAAAGGATTCAAGACTCAGAAGTCGCTCCAAGAAAACCCAACACGAAGACAACCAAACTCTTGTCATTGCAAACAAGATGCTGAGACGCATGACAAAATCTGCTCAACTTGAAATCGCCACTGCAGAAAATCTGATGCTTGGAAAATTCATCTCTCTTTCTCAGCAACTAAATGAAACATTGAGTCTTGACGTAATGTCTGTTATGATGACTGATGCAGGAACTAGTGAAGAATGGATGGCTGAAGTTGAGAAGAAAATTAGCATGTTACTGAAAATGGTTGAAGAGAAAGACAACGAAATTGCCTCTCTCAAAAGCCAAATGGACAGTCGGGATGCTGTTGAATCAAGAGACAAATCTCAAGATACAGTCAATCTTGTCAGCGATGAATGTAAAGGAAGTACTGTCATGACTCGTCAGAAGAAACAAGGACAACATCTTGTTCAGAAAGGATGTTGCTCATCCAAAAGAAAGAATAGACATCGAAGACAGAAGAATTCAAGGAAACCTAAACTTGAGAAAGAAAGAAATCAAGATCTTTCTCAACATCGCCAATTGGTAACCTTCAAAGAATCATCCTCGAGAAATTTTCGTCCCATCAAGAAAATGGAAGAAAATTTTGCAAGTTCATGTTATATCAATGTAGAAGAAGATGGTGCATTGAAGGAAATCAAGCAAAGGACTTCTGTCTTTAATCGCATTGAGCCTTCAACTACTAGACTTTCGGTCTTCCAAAGAATAAGTATGGTTATAGCAGGAGAAGAAGATCAAAGTTTGACGTCCGCCATCACTCGACATTCAGTTTTCCAAAGACTAAGCGTCTCTACATCAAGAAAGTGTCGACCTTCAACAACTGTTTTTGATCGCCTCAAAGTAACAAGCGACCAACATGAAAGAAAGGTGGACAATTCAGAAGTTAAATTGTTCGATGAAATAAACGATGACAATAAGCTTCATAGTACCACGCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAACACAGAAGGTTCTTTGAAGGCGAGTCTGGTGACCACCCCTGCAGGATACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGACAGGTGGTGAAATCACTGCAAATGAATCTGATGACGATCACTGCAACAAATCTCGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAAATGGGGACTGGCGAATCTGGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAATATAGGGACTGGTCTAGCAGGAATGCATCACTGAAGGCAAGTCTGGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAAATGGCACGTAACGCAGACGACCACCCCGACACCTGCAGCGCACGATTCCACCAGATGCGAGTTTGACTTCTTTGACGGTGCTGATCCACAATCCCTTGACGGTGCAGTACAACACGAACGACGGCCAGATTCGAGCGACCCACCGGCGAGTTCTAGCGGCACAAGCGGCCGTAGTTGGAATCGATGA

Coding sequence (CDS)

ATGAACCTCGCGTCTCTCTCCCGATTCTTTGTGACGATAACCCACGCGTTTGGCAGCGATCTAAGGCAAACCAGTGCAACGACAAACCCACTTGAGAGAGACGAGACAAACCCACGACAAACTTCGCCGGAAAAGACGACTCAATCACAAATCACTGCCTTGCTCGCGCCGTCATCGTCGCTCAGAGCTCTCAGACCAAACCCATTTTTCTCGTCCCTTCGCAACTCCCGACTTTTCACCTTCGCGTTCCGTCTCCCTCTCGCCCAGATCTCATGGAGGGAGATTCAGAAACAGAGTCAGAGAACTCAGAGTCTAGAGCATTCTGCCAGAGTCCAGAGTCGTCAGAAGCCAAAGAGTCAAGAGAATTCAGAAGGATTCGAGATTCAGAATTCAAAGGATTCAAGACTCAGAAGTCGCTCCAAGAAAACCCAACACGAAGACAACCAAACTCTTGTCATTGCAAACAAGATGCTGAGACGCATGACAAAATCTGCTCAACTTGAAATCGCCACTGCAGAAAATCTGATGCTTGGAAAATTCATCTCTCTTTCTCAGCAACTAAATGAAACATTGAGTCTTGACGTAATGTCTGTTATGATGACTGATGCAGGAACTAGTGAAGAATGGATGGCTGAAGTTGAGAAGAAAATTAGCATGTTACTGAAAATGGTTGAAGAGAAAGACAACGAAATTGCCTCTCTCAAAAGCCAAATGGACAGTCGGGATGCTGTTGAATCAAGAGACAAATCTCAAGATACAGTCAATCTTGTCAGCGATGAATGTAAAGGAAGTACTGTCATGACTCGTCAGAAGAAACAAGGACAACATCTTGTTCAGAAAGGATGTTGCTCATCCAAAAGAAAGAATAGACATCGAAGACAGAAGAATTCAAGGAAACCTAAACTTGAGAAAGAAAGAAATCAAGATCTTTCTCAACATCGCCAATTGGTAACCTTCAAAGAATCATCCTCGAGAAATTTTCGTCCCATCAAGAAAATGGAAGAAAATTTTGCAAGTTCATGTTATATCAATGTAGAAGAAGATGGTGCATTGAAGGAAATCAAGCAAAGGACTTCTGTCTTTAATCGCATTGAGCCTTCAACTACTAGACTTTCGGTCTTCCAAAGAATAAGTATGGTTATAGCAGGAGAAGAAGATCAAAGTTTGACGTCCGCCATCACTCGACATTCAGTTTTCCAAAGACTAAGCGTCTCTACATCAAGAAAGTGTCGACCTTCAACAACTGTTTTTGATCGCCTCAAAGTAACAAGCGACCAACATGAAAGAAAGGTGGACAATTCAGAAGTTAAATTGTTCGATGAAATAAACGATGACAATAAGCTTCATAGTACCACGCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAACACAGAAGGTTCTTTGAAGGCGAGTCTGGTGACCACCCCTGCAGGATACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGACAGGTGGTGAAATCACTGCAAATGAATCTGATGACGATCACTGCAACAAATCTCGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAAATGGGGACTGGCGAATCTGGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAATATAGGGACTGGTCTAGCAGGAATGCATCACTGAAGGCAAGTCTGGTGACTACCCCTGCAGGCTACTCAGATCACCCAATAAAATGGCACGTAACGCAGACGACCACCCCGACACCTGCAGCGCACGATTCCACCAGATGCGAGTTTGACTTCTTTGACGGTGCTGATCCACAATCCCTTGACGGTGCAGTACAACACGAACGACGGCCAGATTCGAGCGACCCACCGGCGAGTTCTAGCGGCACAAGCGGCCGTAGTTGGAATCGATGA

Protein sequence

MNLASLSRFFVTITHAFGSDLRQTSATTNPLERDETNPRQTSPEKTTQSQITALLAPSSSLRALRPNPFFSSLRNSRLFTFAFRLPLAQISWREIQKQSQRTQSLEHSARVQSRQKPKSQENSEGFEIQNSKDSRLRSRSKKTQHEDNQTLVIANKMLRRMTKSAQLEIATAENLMLGKFISLSQQLNETLSLDVMSVMMTDAGTSEEWMAEVEKKISMLLKMVEEKDNEIASLKSQMDSRDAVESRDKSQDTVNLVSDECKGSTVMTRQKKQGQHLVQKGCCSSKRKNRHRRQKNSRKPKLEKERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASSCYINVEEDGALKEIKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSRKCRPSTTVFDRLKVTSDQHERKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEGSLKASLVTTPAGYYSHQSDWSRQVTGGEITANESDDDHCNKSRDYPCRLLRSPNKMGTGESGDYPCRLLRSPNKYRDWSSRNASLKASLVTTPAGYSDHPIKWHVTQTTTPTPAAHDSTRCEFDFFDGADPQSLDGAVQHERRPDSSDPPASSSGTSGRSWNR

Homology

[Close]

BLAST of Spg023873 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-31
Identity = 105/222 (47.30%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 260 ECKGSTVMTRQKKQGQHLVQKGCCSSKRKNRHRRQKNSRKPKLEKERNQDLSQHRQLVTF 319
           E + S+V T+     +H   KG  S K+K   RR K   KPK  K +++D  Q RQ +T 
Sbjct: 27  ERQTSSVQTKSHFHQKH--SKGNISHKKKG--RRNKKMWKPKPIKGKDEDCLQPRQSITL 86

Query: 320 KESSSRNFRPIKKMEENFASSC-----------YINVEEDGALKEIKQRTSVFNRIEPST 379
            E   R+F      E    ++C           Y + EE     EIKQRTSVF+RI+P T
Sbjct: 87  AEFFPRSFLEDHPEEILEVTTCHTTSIVKVDNNYDSYEEVDNSNEIKQRTSVFDRIKPLT 146

Query: 380 TRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSRKCRPSTTVFDRLKVTSDQHE 439
           TR SVFQR+SM    EE+Q  TS   R S F+RLS+STS+K RPST+ FDRLK+T+DQ +
Sbjct: 147 TRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQ 206

Query: 440 RKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEGSL 471
           R++ + + K F E NDD+K+HS  PSRMKRK SV INTEGSL
Sbjct: 207 REMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 244

[Close]

BLAST of Spg023873 vs. NCBI nr
Match: TYK08944.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-31
Identity = 106/242 (43.80%), Postives = 142/242 (58.68%), Query Frame = 0


Query: 250 SQDTVNLVSDECKGSTVMTRQKKQGQHLVQ----------KGCCSSKRKNRHRRQKNSRK 309
           SQ+    + DE +   V+  +K++  + VQ          KG  S K+K   RR K   K
Sbjct: 422 SQNKEEPIEDEGEEWIVVAHKKERQTNSVQTKSHFHQKHSKGNISHKKKG--RRNKKMWK 481

Query: 310 PKLEKERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASSC-----------YINVEED 369
           PK  K + +D  Q R+ +T  E  SR+F      E    ++C           Y + EE 
Sbjct: 482 PKPIKGKEEDFLQPRRSITLAEFLSRSFLEDHSEEVLEVTACHTTSIVEVDNNYDSYEEV 541

Query: 370 GALKEIKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSR 429
               EIKQRTSVF+RI+P TTR SVFQR+SM    E++Q  TS   R S F+RLS+STS+
Sbjct: 542 DNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSISTSK 601

Query: 430 KCRPSTTVFDRLKVTSDQHERKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEG 471
           K RPST+ FDRLK+T+DQ +R++ + + K F E NDD+K+H+  PSRMKRK SV INTEG
Sbjct: 602 KHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDINTEG 661

[Close]

BLAST of Spg023873 vs. NCBI nr
Match: KAA0063700.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-31
Identity = 130/381 (34.12%), Postives = 179/381 (46.98%), Query Frame = 0


Query: 194 DVMSVMMTDAGTSEEWMAEVEKKISMLLKMVEEKDNEIASLKSQMDSRDAVESRDKSQDT 253
           ++MSVM+TD  TSE  MAE+EKK++ML+K+VEE++  IASLK+ + SRDA ES  K    
Sbjct: 5   NIMSVMVTDVDTSENRMAELEKKVNMLMKVVEEREYAIASLKNHIKSRDAAESSHK---- 64

Query: 254 VNLVSDECKGSTVMTRQKKQG--------------------------------------- 313
            + + +  KG  VM   + Q                                        
Sbjct: 65  -HTIKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTSSLYSKPYT 124

Query: 314 ---------------------------QHLVQ-----------------------KG--- 373
                                      QH+                         KG   
Sbjct: 125 KMIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAF 184

Query: 374 -CCSSKRKNRHRRQKNSRKPKLEKERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASS 433
            C S K+K R  ++  + KP   K +++D  Q R+ +T  E   R+F      E     +
Sbjct: 185 DCISHKKKGRRNKKIWNLKP--IKGKDEDFLQPRRSITLAEFLPRSFLEDHPEEILEVIA 244

Query: 434 CYI-----------NVEEDGALKEIKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSL 471
           C++           + EE     EIK+R  VF+RI+  TTR SVFQR+S     EE+Q  
Sbjct: 245 CHVASIVEVNNNYGSSEEVDNSNEIKKRIYVFDRIKSLTTRSSVFQRLSKATREEENQCP 304

[Close]

BLAST of Spg023873 vs. NCBI nr
Match: TYK27425.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 6.6e-31
Identity = 105/242 (43.39%), Postives = 142/242 (58.68%), Query Frame = 0


Query: 250 SQDTVNLVSDECKGSTVMTRQKKQGQHLVQ----------KGCCSSKRKNRHRRQKNSRK 309
           SQ+    + DE K   V+T +K++    +Q          KG    K+K   RR K  RK
Sbjct: 252 SQNKEEPIEDEGKEWIVVTHKKERQTSSIQTKSHFHQKHSKGNIFYKKKG--RRNKKMRK 311

Query: 310 PKLEKERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASSCY-----------INVEED 369
           PK  K +++D  Q RQ +T  E   R F      E    ++C+           ++ +E 
Sbjct: 312 PKSIKGKDEDFLQPRQSITLTEFLPRRFLEDHPEEILEVTACHTVSIVEVDNNQVSSKEV 371

Query: 370 GALKEIKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSR 429
               EIK+RTS+F+RI+PSTTR SVFQR+SM    EE+Q  TS  TR S F+RLS+STS+
Sbjct: 372 DYSNEIKKRTSIFDRIKPSTTRSSVFQRLSMATKEEENQCPTSISTRSSAFKRLSISTSK 431

Query: 430 KCRPSTTVFDRLKVTSDQHERKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEG 471
           K RPST+VF+RLK+T+DQ +R+  + + K F E NDD+K+HS  PS MKR  SV INTEG
Sbjct: 432 KDRPSTSVFNRLKMTNDQQQREKKSLKAKPFHEENDDDKIHSRVPSHMKRTLSVDINTEG 491

[Close]

BLAST of Spg023873 vs. NCBI nr
Match: KAA0052018.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 6.6e-31
Identity = 106/237 (44.73%), Postives = 141/237 (59.49%), Query Frame = 0


Query: 246 SRDKSQDTVNLV-SDECKGSTVMTRQKKQGQHLVQKGCCSSKRKNRHRRQKNSRKPKLEK 305
           S D+ ++ +++V   E + S+V T      +H   KG  S K+K   RR K   KPK  K
Sbjct: 366 SEDEGEEWIDVVHKKERQTSSVQTNSHFHQKH--SKGNISHKKKG--RRNKKMWKPKPIK 425

Query: 306 ERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASSC-----------YINVEEDGALKE 365
            +++D  Q RQ +T  E   R+F      E    ++C           Y + EE     E
Sbjct: 426 GKDEDFLQPRQSITLAEFLPRSFLEDHPEEILEVTACHTTSIVEVDNNYDSYEEMDNSNE 485

Query: 366 IKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSRKCRPS 425
           IKQRTSVF+RI+P TTR SVFQR+SM    EE+Q  TS   R S F+RLS+STS+K RPS
Sbjct: 486 IKQRTSVFDRIKPLTTRSSVFQRLSMATKKEENQCPTSTYARTSAFKRLSISTSKKHRPS 545

Query: 426 TTVFDRLKVTSDQHERKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEGSL 471
           T+ FDRLK+T+DQ +R++   + K F E NDD+K+HS  PS MKRK SV INT+GSL
Sbjct: 546 TSAFDRLKMTNDQQQREMKTLKAKPFHEENDDDKIHSRVPSHMKRKLSVDINTKGSL 598

[Close]

BLAST of Spg023873 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.4e-32
Identity = 105/222 (47.30%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 260 ECKGSTVMTRQKKQGQHLVQKGCCSSKRKNRHRRQKNSRKPKLEKERNQDLSQHRQLVTF 319
           E + S+V T+     +H   KG  S K+K   RR K   KPK  K +++D  Q RQ +T 
Sbjct: 27  ERQTSSVQTKSHFHQKH--SKGNISHKKKG--RRNKKMWKPKPIKGKDEDCLQPRQSITL 86

Query: 320 KESSSRNFRPIKKMEENFASSC-----------YINVEEDGALKEIKQRTSVFNRIEPST 379
            E   R+F      E    ++C           Y + EE     EIKQRTSVF+RI+P T
Sbjct: 87  AEFFPRSFLEDHPEEILEVTTCHTTSIVKVDNNYDSYEEVDNSNEIKQRTSVFDRIKPLT 146

Query: 380 TRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSRKCRPSTTVFDRLKVTSDQHE 439
           TR SVFQR+SM    EE+Q  TS   R S F+RLS+STS+K RPST+ FDRLK+T+DQ +
Sbjct: 147 TRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQ 206

Query: 440 RKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEGSL 471
           R++ + + K F E NDD+K+HS  PSRMKRK SV INTEGSL
Sbjct: 207 REMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 244

[Close]

BLAST of Spg023873 vs. ExPASy TrEMBL
Match: A0A5A7V935 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002200 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-31
Identity = 130/381 (34.12%), Postives = 179/381 (46.98%), Query Frame = 0


Query: 194 DVMSVMMTDAGTSEEWMAEVEKKISMLLKMVEEKDNEIASLKSQMDSRDAVESRDKSQDT 253
           ++MSVM+TD  TSE  MAE+EKK++ML+K+VEE++  IASLK+ + SRDA ES  K    
Sbjct: 5   NIMSVMVTDVDTSENRMAELEKKVNMLMKVVEEREYAIASLKNHIKSRDAAESSHK---- 64

Query: 254 VNLVSDECKGSTVMTRQKKQG--------------------------------------- 313
            + + +  KG  VM   + Q                                        
Sbjct: 65  -HTIKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTSSLYSKPYT 124

Query: 314 ---------------------------QHLVQ-----------------------KG--- 373
                                      QH+                         KG   
Sbjct: 125 KMIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAF 184

Query: 374 -CCSSKRKNRHRRQKNSRKPKLEKERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASS 433
            C S K+K R  ++  + KP   K +++D  Q R+ +T  E   R+F      E     +
Sbjct: 185 DCISHKKKGRRNKKIWNLKP--IKGKDEDFLQPRRSITLAEFLPRSFLEDHPEEILEVIA 244

Query: 434 CYI-----------NVEEDGALKEIKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSL 471
           C++           + EE     EIK+R  VF+RI+  TTR SVFQR+S     EE+Q  
Sbjct: 245 CHVASIVEVNNNYGSSEEVDNSNEIKKRIYVFDRIKSLTTRSSVFQRLSKATREEENQCP 304

[Close]

BLAST of Spg023873 vs. ExPASy TrEMBL
Match: A0A5D3CCI8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00350 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-31
Identity = 106/242 (43.80%), Postives = 142/242 (58.68%), Query Frame = 0


Query: 250 SQDTVNLVSDECKGSTVMTRQKKQGQHLVQ----------KGCCSSKRKNRHRRQKNSRK 309
           SQ+    + DE +   V+  +K++  + VQ          KG  S K+K   RR K   K
Sbjct: 422 SQNKEEPIEDEGEEWIVVAHKKERQTNSVQTKSHFHQKHSKGNISHKKKG--RRNKKMWK 481

Query: 310 PKLEKERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASSC-----------YINVEED 369
           PK  K + +D  Q R+ +T  E  SR+F      E    ++C           Y + EE 
Sbjct: 482 PKPIKGKEEDFLQPRRSITLAEFLSRSFLEDHSEEVLEVTACHTTSIVEVDNNYDSYEEV 541

Query: 370 GALKEIKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSR 429
               EIKQRTSVF+RI+P TTR SVFQR+SM    E++Q  TS   R S F+RLS+STS+
Sbjct: 542 DNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSISTSK 601

Query: 430 KCRPSTTVFDRLKVTSDQHERKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEG 471
           K RPST+ FDRLK+T+DQ +R++ + + K F E NDD+K+H+  PSRMKRK SV INTEG
Sbjct: 602 KHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDINTEG 661

[Close]

BLAST of Spg023873 vs. ExPASy TrEMBL
Match: A0A5A7U9V3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005100 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.2e-31
Identity = 106/237 (44.73%), Postives = 141/237 (59.49%), Query Frame = 0


Query: 246 SRDKSQDTVNLV-SDECKGSTVMTRQKKQGQHLVQKGCCSSKRKNRHRRQKNSRKPKLEK 305
           S D+ ++ +++V   E + S+V T      +H   KG  S K+K   RR K   KPK  K
Sbjct: 366 SEDEGEEWIDVVHKKERQTSSVQTNSHFHQKH--SKGNISHKKKG--RRNKKMWKPKPIK 425

Query: 306 ERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASSC-----------YINVEEDGALKE 365
            +++D  Q RQ +T  E   R+F      E    ++C           Y + EE     E
Sbjct: 426 GKDEDFLQPRQSITLAEFLPRSFLEDHPEEILEVTACHTTSIVEVDNNYDSYEEMDNSNE 485

Query: 366 IKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSRKCRPS 425
           IKQRTSVF+RI+P TTR SVFQR+SM    EE+Q  TS   R S F+RLS+STS+K RPS
Sbjct: 486 IKQRTSVFDRIKPLTTRSSVFQRLSMATKKEENQCPTSTYARTSAFKRLSISTSKKHRPS 545

Query: 426 TTVFDRLKVTSDQHERKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEGSL 471
           T+ FDRLK+T+DQ +R++   + K F E NDD+K+HS  PS MKRK SV INT+GSL
Sbjct: 546 TSAFDRLKMTNDQQQREMKTLKAKPFHEENDDDKIHSRVPSHMKRKLSVDINTKGSL 598

[Close]

BLAST of Spg023873 vs. ExPASy TrEMBL
Match: A0A5D3DVW2 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001190 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.2e-31
Identity = 105/242 (43.39%), Postives = 142/242 (58.68%), Query Frame = 0


Query: 250 SQDTVNLVSDECKGSTVMTRQKKQGQHLVQ----------KGCCSSKRKNRHRRQKNSRK 309
           SQ+    + DE K   V+T +K++    +Q          KG    K+K   RR K  RK
Sbjct: 252 SQNKEEPIEDEGKEWIVVTHKKERQTSSIQTKSHFHQKHSKGNIFYKKKG--RRNKKMRK 311

Query: 310 PKLEKERNQDLSQHRQLVTFKESSSRNFRPIKKMEENFASSCY-----------INVEED 369
           PK  K +++D  Q RQ +T  E   R F      E    ++C+           ++ +E 
Sbjct: 312 PKSIKGKDEDFLQPRQSITLTEFLPRRFLEDHPEEILEVTACHTVSIVEVDNNQVSSKEV 371

Query: 370 GALKEIKQRTSVFNRIEPSTTRLSVFQRISMVIAGEEDQSLTSAITRHSVFQRLSVSTSR 429
               EIK+RTS+F+RI+PSTTR SVFQR+SM    EE+Q  TS  TR S F+RLS+STS+
Sbjct: 372 DYSNEIKKRTSIFDRIKPSTTRSSVFQRLSMATKEEENQCPTSISTRSSAFKRLSISTSK 431

Query: 430 KCRPSTTVFDRLKVTSDQHERKVDNSEVKLFDEINDDNKLHSTTPSRMKRKFSVLINTEG 471
           K RPST+VF+RLK+T+DQ +R+  + + K F E NDD+K+HS  PS MKR  SV INTEG
Sbjct: 432 KDRPSTSVFNRLKMTNDQQQREKKSLKAKPFHEENDDDKIHSRVPSHMKRTLSVDINTEG 491

The following BLAST results are available for this feature:

BLAST of Spg023873 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044978.1	1.3e-31	47.30	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
TYK08944.1	3.8e-31	43.80	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0063700.1	3.8e-31	34.12	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK27425.1	6.6e-31	43.39	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0052018.1	6.6e-31	44.73	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg023873 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg023873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQ06	6.4e-32	47.30	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7V935	1.9e-31	34.12	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CCI8	1.9e-31	43.80	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7U9V3	3.2e-31	44.73	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3DVW2	3.2e-31	43.39	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Spg023873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 210..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 591..631
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 616..631
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023873.1	Spg023873.1	mRNA