Spg023863 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023863
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 11278256 .. 11280159 (-)
RNA-Seq Expression	Spg023863
Synteny	Spg023863

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAGAGGAGGAAGAAGAAGAGGAAACACCCCTTGTCCTTAAACCAAAAGCTATCCGAATCAAGGAAAGGGAGGAGGAAGAAAAGAAAGTGGGAGTAAAGTATGTGCGAAGGAAGAAGAAAGATGAAGCTGAGCCAAGCACTCAAGTTGCGGCCACAAATGTTGAGCAACCTGAAAGTTTGACTGAAGGTCAACCTGAAATTGCGACTGCAAATATAGCTCCCACACAGGCAACTACTGATCCATCTAAGCCAAAAGCCAAACGACCATCAAGATGGGGTCCAAAGTTGGAGCAGCTGCTAGAGCAAAAAGATTGGAATAAAGTTGTGGTGGATACAATATGGCTAGTAAAAGCCAGGGCCAACCAAATAAAAGATGAGTTATGGGCTGAAAAGAAAAGAAAGAAGAAGGAGGCCAAGAGAAAGCAAAGGGAAGAAGAAGAAAATGATGCACCTGATTTTGTAGCCTCGTGCCTCAAGGACTCAGTGGATGCCACTGAGAAAGAAGAAAAAGAAGAGATTGTGCCTGCTTTAGAGAGCCAATCTAAAGAATACGCAGAGAAGTTTGCAGCTGCAAGCACGACGCAAACAGGGCAAGAACCAGAAAATGCGCCAGTTCCTGAGGTGCAGAAGCAGTTATCCCCACCACCACAAGAGGAAGAAAATGTGCTCGAGGACCTGTTCAAGCACCAGAATGATGAAATTTTTTAGGACCTGTTCGGGCATGTGGAAGAAAAAGATGAAGAGGAGCAACAGGCTCCTGTAGACGAAGATGAGGTCCAAGAGATTACTAAGGACCAGATGCCCAAAAGGGGCAGAGAAGAGGAAGATAGTGAGGCCGAAGGGAAGACTGAAAAGAAGAAAAAGACCAACATTTCCCTCAGAAGGCCAAACACTAGGGGAGCGACTTCTGTGCTTCCCTGAGCCCAGACACCACCACCACCACAGGCTGCAAAAAGAGAACCCTCCACTCCTCGGCCGAAGAAGACTCCTACCAAGAAGTCGAGAGTGGAAATATAGGTGGTATCCCATCCAGACACTCATATACGCCTGATCATTATGAAGAAACGAGTTCTGATGTGTGAGAAGGCCTTCTCCACCAAGACAGGACCTCTCCCAGCCTTCATCGAGAATATTGTGCAGGTATGGTTGGGACTGACGAAGCAAGGAACCGAAAGCAGCTTTCATCCCCTGGTACATGAGTTTTATGCCCAGATTGGGAAAGAGATGGAAACAACAATGCTTCTAAGAGGTCGAATGGTGGAGTTCTCGGTGAAAAAATCAATCAGGTCTTCCGATTGCCATCCCTTAGATATCCAGTTGGCAACATGACTATTGAAGAGCCTACATCAGAGCAGCTGGTAGAGGCCCTTTCCATGGTGGCCCATGAGGGAGTAAAGTGGCAAAGTCCAGGACTGGGATCAGGACTCTGTTATTTGGAGATTTAAAGCCAGAGACAGCGATCTGGCTATATGTGATCAAGAATCGAATCATGCCTACAACGTATGACACGACCATTTCTCAAGAACGTGTCATGTTGTTGTACAGCATGTACAAGGGCTTGGATCTCAACCTCGACCGAATCATCTGGACCGAGATCCTTGCCTGTGGGCACAAAAATGTCGGGAGGTTTTTCTTCCCAACATTGATCACAAAACTGTGTAGGCTTGCTGGAGTTGAGCGAGAAGAGAAAGAAGAGAAGGAGGCTGATAGAACCAAAATAGTCCTATTTTATTACCTCTAATCTAGACTTGTTAGAGGAATTTTATGTTTTATTTGTCTTATTTACAGGTACTTCGAGCTTAGGTGATGTCGGGAGCCAACCACGCAAATTGGTGTTAATTCGGGCCAATTATGGAGTTTTGGAGCCATCTGGGTGTTCTTGGACGGCGAGGAGGTGA

mRNA sequence

ATGGCAGAAGAGGAGGAAGAAGAAGAGGAAACACCCCTTGTCCTTAAACCAAAAGCTATCCGAATCAAGGAAAGGGAGGAGGAAGAAAAGAAAGTGGGAGTAAAGTATGTGCGAAGGAAGAAGAAAGATGAAGCTGAGCCAAGCACTCAAGTTGCGGCCACAAATGTTGAGCAACCTGAAAGTTTGACTGAAGGTCAACCTGAAATTGCGACTGCAAATATAGCTCCCACACAGGCAACTACTGATCCATCTAAGCCAAAAGCCAAACGACCATCAAGATGGGGTCCAAAGTTGGAGCAGCTGCTAGAGCAAAAAGATTGGAATAAAGTTGTGGTGGATACAATATGGCTAGTAAAAGCCAGGGCCAACCAAATAAAAGATGAGTTATGGGCTGAAAAGAAAAGAAAGAAGAAGGAGGCCAAGAGAAAGCAAAGGGAAGAAGAAGAAAATGATGCACCTGATTTTGTAGCCTCGTGCCTCAAGGACTCAGTGGATGCCACTGAGAAAGAAGAAAAAGAAGAGATTGTGCCTGCTTTAGAGAGCCAATCTAAAGAATACGCAGAGAAGTTTGCAGCTGCAAGCACGACGCAAACAGGGCAAGAACCAGAAAATGCGCCAGTTCCTGAGGACCTGTTCGGGCATGTGGAAGAAAAAGATGAAGAGGAGCAACAGGCTCCTGTAGACGAAGATGAGGTCCAAGAGATTACTAAGGACCAGATGCCCAAAAGGGGCAGAGAAGAGGAAGATAGTGAGGCCGAAGGGAAGACTGAAAAGAAGAAAAAGACCAACATTTCCCTCAGAAGGCCAAACACTAGGGGAGCGACTTCTGTGGTATCCCATCCAGACACTCATATACGCCTGATCATTATGAAGAAACGAGTTCTGATGTGTGAGAAGGCCTTCTCCACCAAGACAGGACCTCTCCCAGCCTTCATCGAGAATATTGTGCAGGTCTTCCGATTGCCATCCCTTAGATATCCAGTTGGCAACATGACTATTGAAGAGCCTACATCAGAGCAGCTGGTAGAGGCCCTTTCCATGGTGGCCCATGAGGGAGTAAAGTGGCAAAGTCCAGGACTGGGATCAGGACTCTGTACTTCGAGCTTAGGTGATGTCGGGAGCCAACCACGCAAATTGGTGTTAATTCGGGCCAATTATGGAGTTTTGGAGCCATCTGGGTGTTCTTGGACGGCGAGGAGGTGA

Coding sequence (CDS)

ATGGCAGAAGAGGAGGAAGAAGAAGAGGAAACACCCCTTGTCCTTAAACCAAAAGCTATCCGAATCAAGGAAAGGGAGGAGGAAGAAAAGAAAGTGGGAGTAAAGTATGTGCGAAGGAAGAAGAAAGATGAAGCTGAGCCAAGCACTCAAGTTGCGGCCACAAATGTTGAGCAACCTGAAAGTTTGACTGAAGGTCAACCTGAAATTGCGACTGCAAATATAGCTCCCACACAGGCAACTACTGATCCATCTAAGCCAAAAGCCAAACGACCATCAAGATGGGGTCCAAAGTTGGAGCAGCTGCTAGAGCAAAAAGATTGGAATAAAGTTGTGGTGGATACAATATGGCTAGTAAAAGCCAGGGCCAACCAAATAAAAGATGAGTTATGGGCTGAAAAGAAAAGAAAGAAGAAGGAGGCCAAGAGAAAGCAAAGGGAAGAAGAAGAAAATGATGCACCTGATTTTGTAGCCTCGTGCCTCAAGGACTCAGTGGATGCCACTGAGAAAGAAGAAAAAGAAGAGATTGTGCCTGCTTTAGAGAGCCAATCTAAAGAATACGCAGAGAAGTTTGCAGCTGCAAGCACGACGCAAACAGGGCAAGAACCAGAAAATGCGCCAGTTCCTGAGGACCTGTTCGGGCATGTGGAAGAAAAAGATGAAGAGGAGCAACAGGCTCCTGTAGACGAAGATGAGGTCCAAGAGATTACTAAGGACCAGATGCCCAAAAGGGGCAGAGAAGAGGAAGATAGTGAGGCCGAAGGGAAGACTGAAAAGAAGAAAAAGACCAACATTTCCCTCAGAAGGCCAAACACTAGGGGAGCGACTTCTGTGGTATCCCATCCAGACACTCATATACGCCTGATCATTATGAAGAAACGAGTTCTGATGTGTGAGAAGGCCTTCTCCACCAAGACAGGACCTCTCCCAGCCTTCATCGAGAATATTGTGCAGGTCTTCCGATTGCCATCCCTTAGATATCCAGTTGGCAACATGACTATTGAAGAGCCTACATCAGAGCAGCTGGTAGAGGCCCTTTCCATGGTGGCCCATGAGGGAGTAAAGTGGCAAAGTCCAGGACTGGGATCAGGACTCTGTACTTCGAGCTTAGGTGATGTCGGGAGCCAACCACGCAAATTGGTGTTAATTCGGGCCAATTATGGAGTTTTGGAGCCATCTGGGTGTTCTTGGACGGCGAGGAGGTGA

Protein sequence

MAEEEEEEEETPLVLKPKAIRIKEREEEEKKVGVKYVRRKKKDEAEPSTQVAATNVEQPESLTEGQPEIATANIAPTQATTDPSKPKAKRPSRWGPKLEQLLEQKDWNKVVVDTIWLVKARANQIKDELWAEKKRKKKEAKRKQREEEENDAPDFVASCLKDSVDATEKEEKEEIVPALESQSKEYAEKFAAASTTQTGQEPENAPVPEDLFGHVEEKDEEEQQAPVDEDEVQEITKDQMPKRGREEEDSEAEGKTEKKKKTNISLRRPNTRGATSVVSHPDTHIRLIIMKKRVLMCEKAFSTKTGPLPAFIENIVQVFRLPSLRYPVGNMTIEEPTSEQLVEALSMVAHEGVKWQSPGLGSGLCTSSLGDVGSQPRKLVLIRANYGVLEPSGCSWTARR

Homology

The following BLAST results are available for this feature:

BLAST of Spg023863 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023863 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023863 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023863 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023863.1	Spg023863.1	mRNA