Spg023787 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023787
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Dead box ATP-dependent RNA helicase, putative
Location	scaffold13: 1613217 .. 1622037 (+)
RNA-Seq Expression	Spg023787
Synteny	Spg023787

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTGTCGCCATATAATAGGCTGCTAAGAGCCGAAGAGAAAAACGTAGCCGTACGATTAGAACGAATCGATCGAGCAAGCGAACGAGCTCAGAGAATCCTCCGTTGTTCGTTTTTCGCCTTCACCCCAACAGGGACAGCTTCTTCTAAAACCCTTAAATTCCCACTTCCCATACCGTCTTTCCGGCGACCTCCGGCGCCATGAGTCGCTACGATAGCCGCTCCTCCGATCCCACTTCTTACCGCGACCGTAGAAGGTAGCTCCAACTTCATCCCTTTCCTCTTATCGCATTCCAATGCGGGTTTTGGTATTGATTTCTGTGGGATTTTAAGCTTTTCACTGCGCCTAGGTTTTGCGAGCTTGCTTAATTTTGCACGACAAAGAAGGTTTTCTCATTTTGGGTAATGGGGTTTAGCTGCTTGGATTTTCTTACGTCGTTGCTAATTGAATGTTATGGCTGTAGTGGTTTTTGTTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTCCTAGTGGCAAAAGGGTTCACTGGAATTAATTACAGAACACGAGTTGTTTTTGTAAAGGGTTTTGGCGGGGTACTCCTAGATGTTGCTAGAATTTTAGCTTGTGTAGTGGCAATGTTTCCTGCAAATGTTATACAAAACAGATTCTATTGCTTCTCTCTAGCCACAATTCCTAGAGCAAAGCTTTAATAACCGTATTCAAATTGAAAGTCTTTACTTGAAGATGCACTGTTTAAGAGTTGAGTTTGAAAGCTGTTTTTGGTTTTTAAAATAAAATGAAGGTTTTTTTCTCCTTCCCATGTCATTCGGAGTGGAAACGTATTTGGATGATTATTTATATATATTGTTTTCTCTTGTGGGTTTTTATTTTATTTTTCTTAATTTTATAATCGAAGTCATCTATTTTCCAAAATTATGGGCTAGTGAATGACTAATGTAAGTAGTAGGTCGTTTTTACAAGGAACTTGATTAATTTTTTAGATATAGCTTTCAGAAGCCGTTATGCCAAAAGCACACTTGGGAAAGATCATGAGAGATATTTGATAGGAGGAGGTGGAGGAGGGAAGTGGGTCTCATTTAGTGAGTTGGAGCTGTGTGAATACCTGTTGTGGAGGGTGGTTTAAGAAATAGAAGTTTGTGGAGCAAAAATGTAGCATTTCTCTTAAAATTGCTATGGTGGTCCTGTTTAGAACCTCAAGCTTTGTGGCATCTGGTGATTGTGTATAAGTATGGGTTTCATCTGAATGAATGAGATTTTGTTTTAGTTTCAAAGATATATAGAGACCGACATTTATGACCTTTGAATTCTAAGATCTTTCTCTTGTAACTTGTAAGTCGTTGTTTCTTTGCTTGGCTTTGTCTTCAGCCCCTTCACCTGTTTTATTGTTTTTCTTCTCCTTTTCAAAACTCAAAATTTTGAAGATTTTTTTTTTCTTTGTTAGTTGCCTTAGCCATTTATCAATACCACTGATGTTATGTAAAAAGCCTTCTCTCATGTTTAGGCTTGAACGTATGTGTTTTATGCTGGAGCGGGATAGAGGATTTTTATCAAATATTGTGGCTGTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAAGAAACAATTTCATTGATGTATGAAATATACAAAAGAGATACGAGATCCATCGAGATTACAAAAGACTCTCCCAACTATTAATGAGGGAGGCGTATCACCAAGAAATAGCATAGTAAATGACAGAATCGAAAAAAGCTTCGAAAGTGAGATCCTTGTCCAGGAAGATCCTTCTATTTCTTTCTTTCCATAGGTTCCAAAAGAAGGCTTTGCTGATATTCATCCATAAGAGAGCTTTGATGTTCTTGAAGGGGTGGCCTGTTAGAACCGATGCAAGGAGAAATCCATATTACCCGAGATAATAAGGGGCCATCCAAAAGTCTTTAAAATTCTGGACCAAAATCTCTGAGCAAAGGGGCAAAGGGCAAAAATGTGACCTTGAGATTCATTGTCATCTTTGCATAATAGGCATCTACCAGGCGAGAGAGACATAAAAGGCATGCGTCTTTGCAATACATCATTGGTATTGATGGCTTTGTGAGCTAGCTCCCATAAGAAAAATTTTATTTTCTTTGGGTAATTTTCCTTCCAGATGGTCTTGGCCATGGATGGGTCTAGGAGGTGTCTTGAGGCAGCCATGTCATTGATGAGAGATTTTGTTGTAAAGGATCCATTTAGGTTCAGGGACCATTTCCATATGTCTTCTGTGTGAGATAGAGTGATGACGTCAAGTTCAACACTGGGATCGGCCCATTCTGTTGCCTCGGTATCTTTTAAATTCCTTCCCAATTTGAGGTCCCAAAAGTTGTTTGATAAGTTCCAAACCTCTTTGACCAATGCATTTTTACAATGGGAGAGCTTGTAAAGAAGGGGGAACCTGTTTGCCAATGGGGCACTATTAATCCATGTATTGGTCCAAAAGAAGGTATCACCTCCGTTTCCAAGCTGATGATCAATGCGGCTGGTGATGAGGGTGTGATGCTTAGCAATATTCCTCCATGGGCCTTTGTATTTTGCTGTAGATTCCTTTTTCCGGTTTGTTGTGGCTGTGCCTTTTAATCATCTAAGTCTTCAAATTCTTCCCTCCAATCATTTGCTTGCTCATTAAATATCTTGTTTTTCTTTTCCTGCAAAGTATACCAAAGAATTGAGTTCACAGCACATGCCCAAAGCTACTTTGCTTTCCTCTTGAACAGATAACCACAAAGCATATGAAACACACTATCTTCCAACACATATTGAAAGTTCCTACTTCCTAGATAGACCAAAGATTGGAAAAGAGAATGCCATAACTCCTTACTGTGAAGACAATGAAAAACTAGATGATTCAAATCTTCACAAGCTCCCAAGCAGAGACCAAGAAATTTAAATCCATCATGGTACATCTCCTCTGAAGCCTATTTGATGTATTTAGGACTAAAAGAAAAGCTGAACAAACAAATACCATAATTTTTCTAGAACATTTCCCGTTCCAAATTTCCTTTGAAAAATCTGAAACAATGCAACTTCCAAAGAAAGTTTTCTGTAGAAACAGGGATTTGACTGTAAAGAAGCTTGAAAAGCGAAGATCCCTAGTCCTCTCAACACTTTTTTCCCCAACATGAATTTTTTCCAGCAGCTTCAAAAGATCGATAAACTTCCTAACTTCAATCTCCTCCATATTGCTCCTAGCCAGAAGATGCCAACTATTTACAAAATCACCCTAAAAACCAAAATCACATATTTCTTTTGGTTCCACAATTGCATAGACTAGAGAGCATCTCCTTTCAACCTACAAATTTTTGGAGTTATTAGAATATGGTTTAATCATACCAATCTTTTAAATTAGCCTGTTTATATGTTTTCTTTTTGTGATTGTAGCTTAGTATTCTTTTTTGGAAAAATGATGTATTGTCTTTCCTATGCTTTTAAGAGTAAACTGATTGGTGATTTATTTATTTATTTTCTTAAATAACGTGGCTCTCCCTCTCAACATGTTTTTTGGGCTGCTGCAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATAGCAGTTCAGTGCGATCCTCCTCTAGCAAGAGTGATTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTGCCTCATTTTGAGAAGAACTTCTACATTGAGGCGCCATCAGTGGCGGCAATGACGGAGAGAGAGGTTGAGGAGTATCGACAAAGGAGAGAAATTACTGTAGAAGGTCGCGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGGTACTTTTCTTGAGAAAGATATTTTTTTCTTCAAAACAAACTAAATTTTGACTTCTCTTATTATCATTCAACAGTTCTGCCACATTCCTTATATTTCATTTGTTGGTCATATTTTATAGTTTAAGCATCACTCTTGATATGTGCCAAGTTAATGCTTAGTTGTACAATTTTCTTTATAATTTATGCTAATGAAGACTTTTAACATATGACGTGTGTCAGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAATCCCAAGGATGGCCAATGGCACTTAGAGGTCGAGATCTCATTGGTATTGCTGAAACCGGGTCAGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCTCAGCCAATCCTCTGTAAGGAGATTATATGAAAATTATAAAATGTCTAGTTGGTATTGCCCAGTCATTATGTTCAAACTGACTGATTTCATGTTTTCATTTTATAATATTTCTCAGCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATACAACAAGAAGCTACAAAATTTGGTGCATCATCAAAGATTAAGAGCACATGCATATATGGTGGCGTCCCCAAAGGACCTCAAGTGCGTGATCTTCAGAAAGGTAGATGGTGAATTAAGTTCAAGATGTCCATACTCTTATCCTAACCAAAGTTTGAGGTGTCAATGAACACTTTCTTCTTACATTCATAGTTGATTAATTAAATATCATTTCTCCCCTGAATTTTATGATTACTACCATACCTAGTGTGATTATTCTTGTATTTTTTTTCTCTTTTTGATATTGGTGCTTACGATAGCAAGATGAATGACACCTTCTTAAAATAATAATACCAGGAGTTGAAATTGTAATTGCTACACCGGGGAGGTTGATTGATATGATGGAGTCACATCATACAAACTTGCGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATAAGAAAAATTGTTTCACAGGTTTAAGTTCTTGCGCTCTATATGTAATTACATTAATGTCATTACTGTATGTATTTATTCTTTTCATAGGTTTGATAGATCTAAGGTAAAAGTTTCAGAAAATATCAAGTAAAAACAGTAACTTTCTTGTAGTGTGGGACATTTGGTTTGTTCTAAAACTCCAGCTTTGGGCAATTTTGCAACCTGATTTTCATTTAGTCCTTTGTTCTCTTAATCTTTTTTTTGGCTTTTATACTACTGTACAATTGCTGTTGTTATACCCATTAATGTTGTTCAATACCCATTTTAGTGATTTTATCCCGAATGTCGGTATTCATTAAAAGGTTTATTAGTTATAACATTTTCCATCTCATTTCCACAGAGACATAAGTTGAAAAAATTCCTGGAATTAGATTCTGTATGATAATTTGACTCTAAATGAATCGGCTGTTCAGAAAAAAATTGTTAAAACTGAGTTGTATTTTCTTGGCTTGTGGTGCAGTCCTGGTTGATAGCCAGCTTTTGAGCCAGGCATATATGTGTGTTTTTGGTGGCTTTACTTGTGCTCATTTTTTATGGGTTAGTTGGTGTTGGCATTAAATTGTGTTGTGCTTCATTATTAAAATTTTCTTAAATGTATTTTATTTTCACTACAGATTCGGCCCGATCGACAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCCGGCAGTTTCTTTACAATCCATACAAGGTATAAACTCTTTAACTCATCCCTCTTAGGGGACGTCACTATGGTCTATGTTGCAGCATTTACTCTGTACTTTTTCTTTACAATCTAGCATGCCAGCAGCCAGTATGTATTTTACAGTTTTTCTATATGAAAGAATTCCACCATGAAATAAAGTTTTATTTTCCAGGACAACAGCTGAGGATGTTGATTTCGATTTGACTTTTTATTTTATTTTATTTTATTTGCACAGGTCATCATTGGTTCTCCTGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATTGTCTCTGAAAATCAGAAATATAACAAGTGAGAGTAGTTTGTGTGATCGTATGTCATTCACTTTTGTTTTTTGAGGGGACCATAATTTCCCAAAAGCCTGTCTGGGTATGATGAGAAGTAACTGGTACTGACTAGTTTTCCAGATTGGTGAAATTGCTAGAGGATATCATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGATGTGATCAAATTACCCGACAGCTTCGCATGGATGGTTGGCCTGCCCTTTCAATTCATGGTGATAAGAGTCAAGCAGAAAGAGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGTCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGGTATGATGTATTGTATATGAAAATTTTAAGGTGTGACTTTTTACGGTAGTTATTTGAGATCTGCTCGTGCATTTATTTTGAGAAGAAACAGAACTTCCATTAGGAACACATTTTTCCCTCCATTAGGAACAATTAGAACTTAAGACAAGGGACTCAACAAAAACCACCTTAAATTTATGATCTTACTTATCTGCAATCAGAAGCAGAGTAATATCTCAAAATAAGGAAGAAGTTGAAAGCCTGAAGAGAAAGTGTCGAATTGTCTAGCGCTTCAAATCTTCTCTCAACATGATCCTAAAACATGTGCCTTTAACTATCCAACCGGATATCTTGCAGAATAGCCTATATGCCCAAATCCCTCTATAACTTGTTTCTACCCTTAGGAGGACCGAACCGAAACACCAAGTGGGTTCATAGGTGAGAGGATGATAGAAAATGGTCCATAACGAGAGGAGACAGTGCAATATGGTAATAAGTGGCCGTGATGCTCAACTGCTTGTTTATTAAGAATGGAGCATTATTGACTCATCAAGGAAGAAGTCAATTAAATAGACCTCTGGATGAAGTCAATAGTATCGATTTCCCTAGGAGCTACTAACTGTATTTTCTTCAGCACCTTCATTTTCACAATCTCAAAAAAGAAAAAAAAAAGTATTGATGAAGGAGAAAAAGGAAGAAGGGAAAAGAGAAGGAAAAGCAGGAGAAAATCCCAAAAGGGCGCAAGGATCACATCTTTTTGTCCTCCATCAAGGGAGAAAGCACAATCTCGAAGGATCTGAAGAGAGTAGCCAACTCTGCCCTTTGTAAAGGCTCCTATAGAAAATAAGTTAGAGGGGAACCTGCATAAGAGGAGAAGAGAGCAGTAGCACGGGAGTCAAAAAGCCAGATGAAGGCGAGGGTAGGAGACTGGAAAAGGGATTTGCCTAATCCAATAATCATCTCAAAAGGCAAAAACAAATAAGCTACCCGTTCCCATCAAAGAATTTATAAAATACGAGAACTTGGGTAATGGGTAACCTGTCAGATGCATCATCTCCCTTCTTTGTTTTGTATATATTTTTCATGAAAGAAAAAGAATATACTTGCTTATTAGTGAAAGGCTAAGAGCTATAACAACTATAGATTTGCATGTACCAGAATGCATTTGAATTGTGCAACCCACAAAAATGTGTAGCTGAAGCTTTTGATGAACTTTTAATGCTCTCTTTAGTGTTTCGAAATAAAATAATGTCATTTGATTGCAGATGTGAAGGACGTCAAATATGTAATAAATTATGATTTTCCTGGATCTCTTGAGGATTATGTTCACCGAATTGGTAGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCCAGATTTGCAAAAGAACTTATAGCGATTCTTGAAGAAGCTGGACAGAAGGTCAGTCCCGAACTCGCAGCAATGGGACGTGGTGCACCTCCTCCTCCCTCAGGTTAGTTTTCACCATGCTAGTGAAATGGTGTTCTTGTTACTGCCAATACTTTTAAAAATCAATATAATCAAGAAGCTTGGTCCATTACTTGTATTTCTCTGGTGCATGCTCGTTGGAGTTCTCATACACATTCTTGAGTTTATCAACATTTCTTCTGTATGTTAATCAGGTCATGGGGGATTCCGAGATCGTGGAAGGGGTTATGGCGGTGGACGATCATGGAGTTGATTTTCAAACTTGATGACTTCAGACAGTTATTAGTCCTGCAATCACATGTTCGATAGATATTGCTTACATGCTTTGTGTCGCCATTGCAAAAGTAGGTATATGCTCAGTATTACCAGTTAACCCTTTGAACAGATCCATCTACTGCCACTCTTACTAACACATGACAGGAAGAAGGTGAAAGTTCTCTGGGATTTTGATGTACAAGAAAGAGTTTCATTTTTTCCCCAAAAGAAAAATATTAAAGTCAATGTGTATTTAGTAGACAAAAATTGTTCAAATATGCTGCAGTACTGTATTTATGATCTTGTCTAGTGTGTTAGAAAGTAAATCTCCTAATTATATCTGACCTCTCTCTGAGATACTGTCAAAGATCTAACAGGATCCGCTATCCCGATCATGATTTTCCTACCTCCAGAGGGAAAAGTCCTAATCTTTTTATCATTAAGAAAAGTCGAGCTGCGAAAACTCAGGAAACAGCTAGTCTCTAGATCAGCTGCAACTTTGGACCAACATAATCAGTCATTTATGTAATAATTTGTCTTTGAAACAAGGAAGGATGATTCATGTTTACTCTCAAACCCATCAGGAAAGAGAGAAATTATGATGAACGTGAAGAAAGATGAGAGTTTGACAAGATATCAGGGGCCTGTCTGATGCGTGAGCTTCTAGTGTCAATGAACTAAAGCTCTGTATTTGGTTGACAAAACATGAATTTGGTCAACTCAGTTCATCATTTTTTTCCACTTTAAAGTCTCCCCCTTTGACTCTCTTGTCGGCCTCATCAGCTAGCTTTAGAATTAGAACTCTTTGGAGGAGGTAACAGCTTCTTTGGCGCTGGTTTCTGTTTACTTTCTCGGTCAAAAAGCACTCTTGGTCCTCGA

mRNA sequence

ATGAGTCGCTACGATAGCCGCTCCTCCGATCCCACTTCTTACCGCGACCGTAGAAGGCATCTACCAGGCGAGAGAGACATAAAAGGCATGCGTCTTTGCAATACATCATTGATGGTCTTGGCCATGGATGGGTCTAGGAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATAGCAGTTCAGTGCGATCCTCCTCTAGCAAGAGTGATTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTGCCTCATTTTGAGAAGAACTTCTACATTGAGGCGCCATCAGTGGCGGCAATGACGGAGAGAGAGGTTGAGGAGTATCGACAAAGGAGAGAAATTACTGTAGAAGGTCGCGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAATCCCAAGGATGGCCAATGGCACTTAGAGGTCGAGATCTCATTGGTATTGCTGAAACCGGGTCAGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCTCAGCCAATCCTCTCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATACAACAAGAAGCTACAAAATTTGGTGCATCATCAAAGATTAAGAGCACATGCATATATGGTGGCGTCCCCAAAGGACCTCAAGTGCGTGATCTTCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGGAGGTTGATTGATATGATGGAGTCACATCATACAAACTTGCGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATAAGAAAAATTGTTTCACAGATTCGGCCCGATCGACAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCCGGCAGTTTCTTTACAATCCATACAAGGTCATCATTGGTTCTCCTGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATTGTCTCTGAAAATCAGAAATATAACAAATTGGTGAAATTGCTAGAGGATATCATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGATGTGATCAAATTACCCGACAGCTTCGCATGGATGGTTGGCCTGCCCTTTCAATTCATGGTGATAAGAGTCAAGCAGAAAGAGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGTCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGATGTGAAGGACGTCAAATATGTAATAAATTATGATTTTCCTGGATCTCTTGAGGATTATGTTCACCGAATTGGTAGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCCAGATTTGCAAAAGAACTTATAGCGATTCTTGAAGAAGCTGGACAGAAGGTCAGTCCCGAACTCGCAGCAATGGGACGTGGTGCACCTCCTCCTCCCTCAGGTCATGGGGGATTCCGAGATCGTGGAAGGGGTTATGGCGGTGGACGATCATGGAGTTGA

Coding sequence (CDS)

ATGAGTCGCTACGATAGCCGCTCCTCCGATCCCACTTCTTACCGCGACCGTAGAAGGCATCTACCAGGCGAGAGAGACATAAAAGGCATGCGTCTTTGCAATACATCATTGATGGTCTTGGCCATGGATGGGTCTAGGAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATAGCAGTTCAGTGCGATCCTCCTCTAGCAAGAGTGATTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTGCCTCATTTTGAGAAGAACTTCTACATTGAGGCGCCATCAGTGGCGGCAATGACGGAGAGAGAGGTTGAGGAGTATCGACAAAGGAGAGAAATTACTGTAGAAGGTCGCGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCTGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAATCCCAAGGATGGCCAATGGCACTTAGAGGTCGAGATCTCATTGGTATTGCTGAAACCGGGTCAGGGAAGACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCTCAGCCAATCCTCTCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATACAACAAGAAGCTACAAAATTTGGTGCATCATCAAAGATTAAGAGCACATGCATATATGGTGGCGTCCCCAAAGGACCTCAAGTGCGTGATCTTCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGGAGGTTGATTGATATGATGGAGTCACATCATACAAACTTGCGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATAAGAAAAATTGTTTCACAGATTCGGCCCGATCGACAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCCGGCAGTTTCTTTACAATCCATACAAGGTCATCATTGGTTCTCCTGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATTGTCTCTGAAAATCAGAAATATAACAAATTGGTGAAATTGCTAGAGGATATCATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGATGTGATCAAATTACCCGACAGCTTCGCATGGATGGTTGGCCTGCCCTTTCAATTCATGGTGATAAGAGTCAAGCAGAAAGAGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGTCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGATGTGAAGGACGTCAAATATGTAATAAATTATGATTTTCCTGGATCTCTTGAGGATTATGTTCACCGAATTGGTAGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCCAGATTTGCAAAAGAACTTATAGCGATTCTTGAAGAAGCTGGACAGAAGGTCAGTCCCGAACTCGCAGCAATGGGACGTGGTGCACCTCCTCCTCCCTCAGGTCATGGGGGATTCCGAGATCGTGGAAGGGGTTATGGCGGTGGACGATCATGGAGTTGA

Protein sequence

MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS

Homology

[Close]

BLAST of Spg023787 vs. NCBI nr
Match: XP_038903955.1 (DEAD-box ATP-dependent RNA helicase 20 [Benincasa hispida])

HSP 1 Score: 982.6 bits (2539), Expect = 1.3e-282
Identity = 500/533 (93.81%), Postives = 504/533 (94.56%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSRSSDPTSYRDR                            RSDSGFGGSTGYSSS
Sbjct: 1   MSRYDSRSSDPTSYRDR----------------------------RSDSGFGGSTGYSSS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           VRSSSSK+DY+ASE PKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR
Sbjct: 61  VRSSSSKNDYYASEGPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS
Sbjct: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Spg023787 vs. NCBI nr
Match: XP_004146825.1 (DEAD-box ATP-dependent RNA helicase 20 [Cucumis sativus] >KGN59824.1 hypothetical protein Csa_002637 [Cucumis sativus])

HSP 1 Score: 976.5 bits (2523), Expect = 9.4e-281
Identity = 495/533 (92.87%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSRSSDPTSYRDR                            RSDSG+GGSTGY  S
Sbjct: 1   MSRYDSRSSDPTSYRDR----------------------------RSDSGYGGSTGYGGS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           VRSSSSKSDY+ SEAPKK+DLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR
Sbjct: 61  VRSSSSKSDYYGSEAPKKLDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TC+YGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCVYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKELI ILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS
Sbjct: 481 ARFAKELIGILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Spg023787 vs. NCBI nr
Match: XP_008447604.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Cucumis melo])

HSP 1 Score: 975.3 bits (2520), Expect = 2.1e-280
Identity = 496/533 (93.06%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSRSSDPTSYRDR                            RSDSG+GGSTGYS S
Sbjct: 1   MSRYDSRSSDPTSYRDR----------------------------RSDSGYGGSTGYSGS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           VRSSSSK+DY+ SEA KKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR
Sbjct: 61  VRSSSSKNDYYGSEASKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKELI ILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS
Sbjct: 481 ARFAKELIGILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Spg023787 vs. NCBI nr
Match: XP_023525778.1 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 973.4 bits (2515), Expect = 7.9e-280
Identity = 495/533 (92.87%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSR+SDPTSYRDR                            RSDSGFGGSTGY +S
Sbjct: 1   MSRYDSRTSDPTSYRDR----------------------------RSDSGFGGSTGYGNS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEA SVA MTEREVEEYR RREITVEGR
Sbjct: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVAEMTEREVEEYRTRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRG+GGGRSWS
Sbjct: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGFGGGRSWS 505

[Close]

BLAST of Spg023787 vs. NCBI nr
Match: XP_022148206.1 (DEAD-box ATP-dependent RNA helicase 20 [Momordica charantia])

HSP 1 Score: 973.0 bits (2514), Expect = 1.0e-279
Identity = 494/533 (92.68%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYD RSSDPTSYRDR                            RSDSGFGGSTGYSSS
Sbjct: 1   MSRYDGRSSDPTSYRDR----------------------------RSDSGFGGSTGYSSS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           VRSSSSKSDY+ASEAP+KVDLDGLP FEKNFY+EAPSVAAMTEREVEEYRQRREIT+EGR
Sbjct: 61  VRSSSSKSDYYASEAPRKVDLDGLPPFEKNFYVEAPSVAAMTEREVEEYRQRREITIEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEIAKAGF EPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFAEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKELI+ILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGR WS
Sbjct: 481 ARFAKELISILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRPWS 505

[Close]

BLAST of Spg023787 vs. ExPASy Swiss-Prot
Match: Q5QMN3 (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0197200 PE=3 SV=2)

HSP 1 Score: 855.9 bits (2210), Expect = 2.4e-247
Identity = 441/533 (82.74%), Postives = 467/533 (87.62%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSR+D R++DP SYRDR                            RS+  FGG T     
Sbjct: 1   MSRFDGRAADPGSYRDR----------------------------RSEGAFGGGT----R 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
             + +SK+D  A+ A    DLDGLP FEKNFY+E+PSVA MTE EVE YR+RREITVEGR
Sbjct: 61  AFAPTSKADSAAAAA----DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPV+ FRDVGFP+YV+QEI KAGF EPTPIQSQGWPMALRGRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPIL+PGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDM+ESHHTNLRRVTYLVLDEADRMLDMGF+PQI+KIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLAR FL++PYKVIIGS +LKANHAI QHV+I+SE+QKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLV LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF+S
Sbjct: 361 KLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAK+LI ILEEAGQKVSPELA MGRGAPPP SGH   RDR RGYGGGRSWS
Sbjct: 481 ARFAKDLINILEEAGQKVSPELANMGRGAPPPSSGH---RDRYRGYGGGRSWS 494

[Close]

BLAST of Spg023787 vs. ExPASy Swiss-Prot
Match: Q9C718 (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1)

HSP 1 Score: 851.3 bits (2198), Expect = 6.0e-246
Identity = 431/533 (80.86%), Postives = 469/533 (87.99%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSR+ D TSYRDR                            RSDSGFGG++ Y SS
Sbjct: 1   MSRYDSRTGDSTSYRDR----------------------------RSDSGFGGTSSYGSS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
              +SSK D   +E+P+K+DLDGL  FEKNFY+E+P+VAAMT+ EVEEYR+ REITVEG+
Sbjct: 61  GSHTSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGK 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           D+PKPVKSFRDVGFPDYV++E+ KAGFTEPTPIQSQGWPMA++GRDLIGIAETGSGKTL+
Sbjct: 121 DIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLS 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQP+L+ GDGPIVLVLAPTRELAVQIQQEA+KFG+SSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMES++TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
            IRPDRQTLYWSATWPKEVEQL+++FLYNPYKVIIGS DLKAN AIRQ VD++SE+QKYN
Sbjct: 301 HIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT AN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKEL  IL+EAGQKVSPELA+MGR   PPP G GGFRDR    G  R WS
Sbjct: 481 ARFAKELTNILQEAGQKVSPELASMGRSTAPPPPGLGGFRDR----GSRRGWS 501

[Close]

BLAST of Spg023787 vs. ExPASy Swiss-Prot
Match: Q5N7W4 (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0911100 PE=2 SV=2)

HSP 1 Score: 694.9 bits (1792), Expect = 7.2e-199
Identity = 357/563 (63.41%), Postives = 424/563 (75.31%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAM------------------ 60
           M+ YD R +DP+SYRDRR  L G   +        +    A                   
Sbjct: 96  MNPYDLRYADPSSYRDRRSDLAGAPVLAASAPAAANPYAAAYAPAPAAPVAPAGGDFSRF 155

Query: 61  ------------DGSRSDSGFGGSTGYSSSVRSSSSKSDYHASEAPKKVDLDGLPHFEKN 120
                          R   G GG+ GY         +    +   PK  D   L  FEKN
Sbjct: 156 GGRGRGGGAGGGGWGRGGGGGGGAGGYRGGGGRGGGRDALDSLSLPKP-DFRSLIPFEKN 215

Query: 121 FYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEP 180
           FY+E P+V AM++ +V +YR++R+ITVEG DVPKPV+ F++  FPDY MQ IAK+GF EP
Sbjct: 216 FYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEP 275

Query: 181 TPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTR 240
           TPIQSQGWPMAL+GRD+IGIA+TGSGKTL+YLLP +VHV AQP L  GDGPIVL+LAPTR
Sbjct: 276 TPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTR 335

Query: 241 ELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHT 300
           ELAVQIQQE+ KFG+ S+ +STCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E  HT
Sbjct: 336 ELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHT 395

Query: 301 NLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNP 360
           NLRRVTYLVLDEADRMLDMGF+PQIRKIV+QIRPDRQTLYWSATWP+EVE LARQFL NP
Sbjct: 396 NLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNP 455

Query: 361 YKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITR 420
           YKVIIGSPDLKANH+I+Q ++++SE++KY +L KLL D+MDGSRILIF  TKK CD++TR
Sbjct: 456 YKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTR 515

Query: 421 QLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFP 480
           QLRMDGWPALSIHGDK+QAERD+VL+EF+SGKSPIM ATDVAARGLDVKD+K VIN+DFP
Sbjct: 516 QLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFDFP 575

Query: 481 GSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAP 534
            +LEDY+HRIGRTGRAGA GTA+TFFT +NA+F++ L+ IL EAGQ V+P L +M + A 
Sbjct: 576 TTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILREAGQVVNPALESMAKSA- 635

[Close]

BLAST of Spg023787 vs. ExPASy Swiss-Prot
Match: Q8W4R3 (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2)

HSP 1 Score: 677.9 bits (1748), Expect = 9.0e-194
Identity = 340/489 (69.53%), Postives = 405/489 (82.82%), Query Frame = 0


Query: 44  GSRSDSGFGGSTGYSSSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTE 103
           G   D   GG+ G     R  SSK +  +   PK+ +   L HFEKNFY+E+P+V AMTE
Sbjct: 84  GQYGDRNGGGNWG-GGGGRGGSSKRELDSVSLPKQ-NFGNLVHFEKNFYVESPTVQAMTE 143

Query: 104 REVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALR 163
           ++V  YR  R+I+VEGRDVPKP+K F+D  FPD +++ IAK GFTEPTPIQ+QGWPMAL+
Sbjct: 144 QDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALK 203

Query: 164 GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKF 223
           GRDLIGIAETGSGKTLAYLLPA+VHV+AQP L   DGPIVL+LAPTRELAVQIQ+E+ KF
Sbjct: 204 GRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKF 263

Query: 224 GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEA 283
           G  S ++STCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E  HTNL+RVTYLVLDEA
Sbjct: 264 GLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEA 323

Query: 284 DRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKAN 343
           DRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+EVE LARQFL +PYK IIGS DLKAN
Sbjct: 324 DRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKAN 383

Query: 344 HAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIH 403
            +I Q ++IV   +KYN+L+ LL+ +MDGS+ILIF++TK+GCDQ+TRQLRMDGWPAL+IH
Sbjct: 384 QSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIH 443

Query: 404 GDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRT 463
           GDK+Q+ERD VL+EF+SG+SPIMTATDVAARGLDVKD+K V+NYDFP +LEDY+HRIGRT
Sbjct: 444 GDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRT 503

Query: 464 GRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGG---FR 523
           GRAGAKG A+TFFT  NA+FA+EL+ IL+EAGQ V P L+A+ R +     G GG   FR
Sbjct: 504 GRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGSGYGGSGGGRNFR 563

Query: 524 DRGRGYGGG 530
            RG G GGG
Sbjct: 564 PRGGGRGGG 570

[Close]

BLAST of Spg023787 vs. ExPASy Swiss-Prot
Match: Q4X195 (ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=dbp2 PE=3 SV=2)

HSP 1 Score: 616.3 bits (1588), Expect = 3.2e-175
Identity = 313/491 (63.75%), Postives = 382/491 (77.80%), Query Frame = 0


Query: 44  GSRSDSGFGGSTGYSSSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTE 103
           G     G+GG  G           S+  A    +  DLD LP FEK+FY E P VAA +E
Sbjct: 38  GGGYGGGYGGGYGRGGGAAGGDRMSNLGAGLKKQDWDLDSLPKFEKSFYKEHPDVAARSE 97

Query: 104 REVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALR 163
           REVEE+R++ E+TV+GR+VP+PV++F + GFP YV+ E+   GF  PT IQSQGWPMAL 
Sbjct: 98  REVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALS 157

Query: 164 GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKF 223
           GRD++GIAETGSGKTL Y LPAIVH+NAQP+L+PGDGPIVL+LAPTRELAVQIQ E +KF
Sbjct: 158 GRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKF 217

Query: 224 GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEA 283
           G SS+I++TC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDM+E+  TNLRRVTYLVLDEA
Sbjct: 218 GKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEA 277

Query: 284 DRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKAN 343
           DRMLDMGF+PQIRKIVSQIRPDRQT  WSATWPKEV QLA  FL +  +V IGS DL AN
Sbjct: 278 DRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSAN 337

Query: 344 HAIRQHVDIVSENQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALS 403
           H I Q V++VS+ +K +K++K LE IM+   ++ LIF  TK+  D+ITR LR DGWPALS
Sbjct: 338 HRITQIVEVVSDFEKRDKMIKHLEKIMENRSNKCLIFTGTKRIADEITRFLRQDGWPALS 397

Query: 404 IHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIG 463
           IHGDK Q ERDWVL+EF++GKSPIM ATDVA+RG+DV+D+ +V+NYD+P + EDY+HRIG
Sbjct: 398 IHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIG 457

Query: 464 RTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGF-R 523
           RTGRAGAKGTA TFFT  N++ A++L+ IL EA Q++ P LA M R +     GHGG+ R
Sbjct: 458 RTGRAGAKGTAITFFTTENSKQARDLVTILTEAKQQIDPRLAEMARYS-GGGGGHGGYGR 517

Query: 524 DRGR-GYGGGR 531
             GR G GGGR
Sbjct: 518 WGGRGGRGGGR 527

[Close]

BLAST of Spg023787 vs. ExPASy TrEMBL
Match: A0A0A0LFT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848820 PE=3 SV=1)

HSP 1 Score: 976.5 bits (2523), Expect = 4.5e-281
Identity = 495/533 (92.87%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSRSSDPTSYRDR                            RSDSG+GGSTGY  S
Sbjct: 1   MSRYDSRSSDPTSYRDR----------------------------RSDSGYGGSTGYGGS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           VRSSSSKSDY+ SEAPKK+DLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR
Sbjct: 61  VRSSSSKSDYYGSEAPKKLDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TC+YGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCVYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKELI ILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS
Sbjct: 481 ARFAKELIGILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Spg023787 vs. ExPASy TrEMBL
Match: A0A1S3BHT9 (DEAD-box ATP-dependent RNA helicase 20 OS=Cucumis melo OX=3656 GN=LOC103490017 PE=3 SV=1)

HSP 1 Score: 975.3 bits (2520), Expect = 1.0e-280
Identity = 496/533 (93.06%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSRSSDPTSYRDR                            RSDSG+GGSTGYS S
Sbjct: 1   MSRYDSRSSDPTSYRDR----------------------------RSDSGYGGSTGYSGS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           VRSSSSK+DY+ SEA KKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR
Sbjct: 61  VRSSSSKNDYYGSEASKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKELI ILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS
Sbjct: 481 ARFAKELIGILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 505

[Close]

BLAST of Spg023787 vs. ExPASy TrEMBL
Match: A0A6J1D4P2 (DEAD-box ATP-dependent RNA helicase 20 OS=Momordica charantia OX=3673 GN=LOC111016931 PE=3 SV=1)

HSP 1 Score: 973.0 bits (2514), Expect = 5.0e-280
Identity = 494/533 (92.68%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYD RSSDPTSYRDR                            RSDSGFGGSTGYSSS
Sbjct: 1   MSRYDGRSSDPTSYRDR----------------------------RSDSGFGGSTGYSSS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           VRSSSSKSDY+ASEAP+KVDLDGLP FEKNFY+EAPSVAAMTEREVEEYRQRREIT+EGR
Sbjct: 61  VRSSSSKSDYYASEAPRKVDLDGLPPFEKNFYVEAPSVAAMTEREVEEYRQRREITIEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEIAKAGF EPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFAEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKELI+ILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGR WS
Sbjct: 481 ARFAKELISILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRPWS 505

[Close]

BLAST of Spg023787 vs. ExPASy TrEMBL
Match: A0A6J1IZQ3 (DEAD-box ATP-dependent RNA helicase 20 OS=Cucurbita maxima OX=3661 GN=LOC111479923 PE=3 SV=1)

HSP 1 Score: 970.7 bits (2508), Expect = 2.5e-279
Identity = 494/530 (93.21%), Postives = 502/530 (94.72%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSRSSDPTSYRDR                            RSDSGFGGSTGYSSS
Sbjct: 1   MSRYDSRSSDPTSYRDR----------------------------RSDSGFGGSTGYSSS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           V+SSSSKSD++ASEAP+KVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR
Sbjct: 61  VQSSSSKSDHYASEAPRKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEI+KAGFTEPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEISKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGR 531
           ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGR
Sbjct: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGR 502

[Close]

BLAST of Spg023787 vs. ExPASy TrEMBL
Match: A0A6J1GW12 (DEAD-box ATP-dependent RNA helicase 20 OS=Cucurbita moschata OX=3662 GN=LOC111458063 PE=3 SV=1)

HSP 1 Score: 969.5 bits (2505), Expect = 5.6e-279
Identity = 493/530 (93.02%), Postives = 502/530 (94.72%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSRSSDPTSYRDR                            RSDSGFGGSTGYSSS
Sbjct: 1   MSRYDSRSSDPTSYRDR----------------------------RSDSGFGGSTGYSSS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
           V+SSSSKSD++ASEAP+KVDLDGLPHFEKNFYIEAPSVAAMTEREV+EYRQRREITVEGR
Sbjct: 61  VQSSSSKSDHYASEAPRKVDLDGLPHFEKNFYIEAPSVAAMTEREVDEYRQRREITVEGR 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           DVPKPVKSFRDVGFPDYVMQEI+KAGFTEPTPIQSQGWPMAL+GRDLIGIAETGSGKTLA
Sbjct: 121 DVPKPVKSFRDVGFPDYVMQEISKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
           QIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN
Sbjct: 301 QIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGR 531
           ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGR
Sbjct: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGR 502

[Close]

BLAST of Spg023787 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 851.3 bits (2198), Expect = 4.2e-247
Identity = 431/533 (80.86%), Postives = 469/533 (87.99%), Query Frame = 0


Query: 1   MSRYDSRSSDPTSYRDRRRHLPGERDIKGMRLCNTSLMVLAMDGSRSDSGFGGSTGYSSS 60
           MSRYDSR+ D TSYRDR                            RSDSGFGG++ Y SS
Sbjct: 1   MSRYDSRTGDSTSYRDR----------------------------RSDSGFGGTSSYGSS 60

Query: 61  VRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGR 120
              +SSK D   +E+P+K+DLDGL  FEKNFY+E+P+VAAMT+ EVEEYR+ REITVEG+
Sbjct: 61  GSHTSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGK 120

Query: 121 DVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA 180
           D+PKPVKSFRDVGFPDYV++E+ KAGFTEPTPIQSQGWPMA++GRDLIGIAETGSGKTL+
Sbjct: 121 DIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLS 180

Query: 181 YLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPK 240
           YLLPAIVHVNAQP+L+ GDGPIVLVLAPTRELAVQIQQEA+KFG+SSKIK+TCIYGGVPK
Sbjct: 181 YLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPK 240

Query: 241 GPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300
           GPQVRDLQKGVEIVIATPGRLIDMMES++TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS
Sbjct: 241 GPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 300

Query: 301 QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYN 360
            IRPDRQTLYWSATWPKEVEQL+++FLYNPYKVIIGS DLKAN AIRQ VD++SE+QKYN
Sbjct: 301 HIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYN 360

Query: 361 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420
           KLVKLLEDIMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS
Sbjct: 361 KLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 420

Query: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 480
           GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT AN
Sbjct: 421 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVAN 480

Query: 481 ARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGGGRSWS 534
           ARFAKEL  IL+EAGQKVSPELA+MGR   PPP G GGFRDR    G  R WS
Sbjct: 481 ARFAKELTNILQEAGQKVSPELASMGRSTAPPPPGLGGFRDR----GSRRGWS 501

[Close]

BLAST of Spg023787 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 677.9 bits (1748), Expect = 6.4e-195
Identity = 340/489 (69.53%), Postives = 405/489 (82.82%), Query Frame = 0


Query: 44  GSRSDSGFGGSTGYSSSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTE 103
           G   D   GG+ G     R  SSK +  +   PK+ +   L HFEKNFY+E+P+V AMTE
Sbjct: 84  GQYGDRNGGGNWG-GGGGRGGSSKRELDSVSLPKQ-NFGNLVHFEKNFYVESPTVQAMTE 143

Query: 104 REVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALR 163
           ++V  YR  R+I+VEGRDVPKP+K F+D  FPD +++ IAK GFTEPTPIQ+QGWPMAL+
Sbjct: 144 QDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALK 203

Query: 164 GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKF 223
           GRDLIGIAETGSGKTLAYLLPA+VHV+AQP L   DGPIVL+LAPTRELAVQIQ+E+ KF
Sbjct: 204 GRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKF 263

Query: 224 GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEA 283
           G  S ++STCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E  HTNL+RVTYLVLDEA
Sbjct: 264 GLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEA 323

Query: 284 DRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKAN 343
           DRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+EVE LARQFL +PYK IIGS DLKAN
Sbjct: 324 DRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKAN 383

Query: 344 HAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIH 403
            +I Q ++IV   +KYN+L+ LL+ +MDGS+ILIF++TK+GCDQ+TRQLRMDGWPAL+IH
Sbjct: 384 QSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIH 443

Query: 404 GDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRT 463
           GDK+Q+ERD VL+EF+SG+SPIMTATDVAARGLDVKD+K V+NYDFP +LEDY+HRIGRT
Sbjct: 444 GDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRT 503

Query: 464 GRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGG---FR 523
           GRAGAKG A+TFFT  NA+FA+EL+ IL+EAGQ V P L+A+ R +     G GG   FR
Sbjct: 504 GRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGSGYGGSGGGRNFR 563

Query: 524 DRGRGYGGG 530
            RG G GGG
Sbjct: 564 PRGGGRGGG 570

[Close]

BLAST of Spg023787 vs. TAIR 10
Match: AT5G63120.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 568.2 bits (1463), Expect = 7.2e-162
Identity = 279/393 (70.99%), Postives = 332/393 (84.48%), Query Frame = 0


Query: 44  GSRSDSGFGGSTGYSSSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEAPSVAAMTE 103
           G   D   GG+ G     R  SSK +  +   PK+ +   L HFEKNFY+E+P+V AMTE
Sbjct: 84  GQYGDRNGGGNWG-GGGGRGGSSKRELDSVSLPKQ-NFGNLVHFEKNFYVESPTVQAMTE 143

Query: 104 REVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALR 163
           ++V  YR  R+I+VEGRDVPKP+K F+D  FPD +++ IAK GFTEPTPIQ+QGWPMAL+
Sbjct: 144 QDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALK 203

Query: 164 GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKF 223
           GRDLIGIAETGSGKTLAYLLPA+VHV+AQP L   DGPIVL+LAPTRELAVQIQ+E+ KF
Sbjct: 204 GRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKF 263

Query: 224 GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEA 283
           G  S ++STCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E  HTNL+RVTYLVLDEA
Sbjct: 264 GLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEA 323

Query: 284 DRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKAN 343
           DRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+EVE LARQFL +PYK IIGS DLKAN
Sbjct: 324 DRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKAN 383

Query: 344 HAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIH 403
            +I Q ++IV   +KYN+L+ LL+ +MDGS+ILIF++TK+GCDQ+TRQLRMDGWPAL+IH
Sbjct: 384 QSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIH 443

Query: 404 GDKSQAERDWVLSEFRSGKSPIMTATDVAARGL 437
           GDK+Q+ERD VL+EF+SG+SPIMTATDVAARGL
Sbjct: 444 GDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474

[Close]

BLAST of Spg023787 vs. TAIR 10
Match: AT3G01540.2 (DEAD box RNA helicase 1 )

HSP 1 Score: 466.1 bits (1198), Expect = 3.8e-131
Identity = 244/452 (53.98%), Postives = 323/452 (71.46%), Query Frame = 0


Query: 93  IEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTP 152
           +  PS A  +E   E Y +R EITV G  VP P+ SF   GFP  +++E+  AGF+ PTP
Sbjct: 124 VPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTP 183

Query: 153 IQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGD-GPIVLVLAPTRE 212
           IQ+Q WP+A++GRD++ IA+TGSGKTL YL+P  +H+  Q I +    GP +LVL+PTRE
Sbjct: 184 IQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRE 243

Query: 213 LAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTN 272
           LA QIQ+EA KFG SS+I  TC+YGG PKGPQ+RDL++G +IV+ATPGRL D++E    +
Sbjct: 244 LATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRIS 303

Query: 273 LRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPY 332
           LR+++YLVLDEADRMLDMGF+PQIRKIV +I   RQTL ++ATWPK V ++A   L NP 
Sbjct: 304 LRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPA 363

Query: 333 KVIIGSPD-LKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITR 392
           +V IG+ D L AN +I QH+++V+  +K  +L ++L     GS+++IF  TK+ CDQ+TR
Sbjct: 364 QVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTR 423

Query: 393 QLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFP 452
            L    + A +IHGDKSQ ERD VL++FRSG++P++ ATDVAARGLDVKD++ V+NYDFP
Sbjct: 424 NLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFP 483

Query: 453 GSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSP---ELAAMGR 512
             +EDYVHRIGRTGRAGA G A+TFF   +++ A +LI ILE A Q+V P   E+A  G 
Sbjct: 484 NGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG 543

Query: 513 GAP------PPPSGHGGFRDRGRGYGGGRSWS 534
           G         PPSG  G R    GYGG  S++
Sbjct: 544 GGMNKFSRWGPPSGGRG-RGGDSGYGGRGSFA 571

[Close]

BLAST of Spg023787 vs. TAIR 10
Match: AT3G01540.1 (DEAD box RNA helicase 1 )

HSP 1 Score: 466.1 bits (1198), Expect = 3.8e-131
Identity = 244/452 (53.98%), Postives = 323/452 (71.46%), Query Frame = 0


Query: 93  IEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTP 152
           +  PS A  +E   E Y +R EITV G  VP P+ SF   GFP  +++E+  AGF+ PTP
Sbjct: 124 VPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTP 183

Query: 153 IQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGD-GPIVLVLAPTRE 212
           IQ+Q WP+A++GRD++ IA+TGSGKTL YL+P  +H+  Q I +    GP +LVL+PTRE
Sbjct: 184 IQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRE 243

Query: 213 LAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTN 272
           LA QIQ+EA KFG SS+I  TC+YGG PKGPQ+RDL++G +IV+ATPGRL D++E    +
Sbjct: 244 LATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRIS 303

Query: 273 LRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPY 332
           LR+++YLVLDEADRMLDMGF+PQIRKIV +I   RQTL ++ATWPK V ++A   L NP 
Sbjct: 304 LRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPA 363

Query: 333 KVIIGSPD-LKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITR 392
           +V IG+ D L AN +I QH+++V+  +K  +L ++L     GS+++IF  TK+ CDQ+TR
Sbjct: 364 QVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTR 423

Query: 393 QLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFP 452
            L    + A +IHGDKSQ ERD VL++FRSG++P++ ATDVAARGLDVKD++ V+NYDFP
Sbjct: 424 NLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFP 483

Query: 453 GSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSP---ELAAMGR 512
             +EDYVHRIGRTGRAGA G A+TFF   +++ A +LI ILE A Q+V P   E+A  G 
Sbjct: 484 NGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG 543

Query: 513 GAP------PPPSGHGGFRDRGRGYGGGRSWS 534
           G         PPSG  G R    GYGG  S++
Sbjct: 544 GGMNKFSRWGPPSGGRG-RGGDSGYGGRGSFA 571

The following BLAST results are available for this feature:

BLAST of Spg023787 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903955.1	1.3e-282	93.81	DEAD-box ATP-dependent RNA helicase 20 [Benincasa hispida]	[more]
XP_004146825.1	9.4e-281	92.87	DEAD-box ATP-dependent RNA helicase 20 [Cucumis sativus] >KGN59824.1 hypothetica...	[more]
XP_008447604.1	2.1e-280	93.06	PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Cucumis melo]	[more]
XP_023525778.1	7.9e-280	92.87	DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022148206.1	1.0e-279	92.68	DEAD-box ATP-dependent RNA helicase 20 [Momordica charantia]	[more]

BLAST of Spg023787 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5QMN3	2.4e-247	82.74	DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9C718	6.0e-246	80.86	DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 P...	[more]
Q5N7W4	7.2e-199	63.41	DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8W4R3	9.0e-194	69.53	DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 P...	[more]
Q4X195	3.2e-175	63.75	ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / ...	[more]

BLAST of Spg023787 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFT6	4.5e-281	92.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848820 PE=3 SV=1	[more]
A0A1S3BHT9	1.0e-280	93.06	DEAD-box ATP-dependent RNA helicase 20 OS=Cucumis melo OX=3656 GN=LOC103490017 P...	[more]
A0A6J1D4P2	5.0e-280	92.68	DEAD-box ATP-dependent RNA helicase 20 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1IZQ3	2.5e-279	93.21	DEAD-box ATP-dependent RNA helicase 20 OS=Cucurbita maxima OX=3661 GN=LOC1114799...	[more]
A0A6J1GW12	5.6e-279	93.02	DEAD-box ATP-dependent RNA helicase 20 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Spg023787 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55150.1	4.2e-247	80.86	DEA(D/H)-box RNA helicase family protein	[more]
AT5G63120.2	6.4e-195	69.53	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.1	7.2e-162	70.99	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G01540.2	3.8e-131	53.98	DEAD box RNA helicase 1	[more]
AT3G01540.1	3.8e-131	53.98	DEAD box RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 386..467 e-value: 3.4E-34 score: 129.6
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 358..467 e-value: 6.1E-30 score: 103.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 361..506 score: 24.167423
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 146..349 e-value: 6.6E-68 score: 241.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 158..333 score: 33.143726
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 90..336 e-value: 5.0E-92 score: 309.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 337..507 e-value: 7.3E-60 score: 203.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 199..482
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 151..322 e-value: 1.3E-49 score: 168.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 505..533
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR47958:SF73	LD32873P	coord: 82..518
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 82..518
None	No IPR available	CDD	cd17966	DEADc_DDX5_DDX17	coord: 138..333 e-value: 5.12377E-143 score: 407.911
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 346..476 e-value: 1.13974E-61 score: 196.959
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 279..287
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 127..155 score: 11.888256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023787.1	Spg023787.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding