Spg023782 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023782
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L11
Location	scaffold13: 8966081 .. 8968727 (-)
RNA-Seq Expression	Spg023782
Synteny	Spg023782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAACAACACCTCCGAACCTTCTGTGACCGACTGCACCAACCCCGTCGAAGAACCCACAACCTCGCTATCAGAGCACTCCAATGGAGCCTTTGAGGTCTTATCATCGTTTGCCTTTGTCACCTTATCACCTCTCCCATCGCCTCACTTGCGAATGCACAGGATTCTTAATTGGTGATTTTTTTCGCCATCGCTCACTGCTTGCATCACCAGGCCCAGTCGGTGGAATCGGTGCCAATCACAACAAGTCGGCTGGAGAAAAATCAATCTGTGCTAATCACAATCGGTGGCACAATCTCAGTCTTGCCGCAAAATTCCATAAGCATTTGGTGCTAAAAATCGGTGCCGCAACCTCGATGTACGACATGGTTGAAACTGGAAAGATCATCATTTGCGGCTGTCGGCACTTGTAATTCTAGGGATTCAACGATTTTTGAAGCAGATTGTGAGTTACATTTTTTTTTTTTTGTGCTTTCTTTTAATATTTTCTCTCTTTAATCTTTTCCTCTCCATTTCATTGATTTTTTCAATTAATATTGCTAACTTTTTCTCTGAATCTTTCAAATCTGTTTTAAACTCAACGCCTTAAAAAGAATGAACAATTTTTCTACTTCTTTTGTGGCTTTCCAAACCACCAACCAGTCAGAAAGTAGAAATTAAAGTTACCAATCAGTTTAGCTTCAAGGTAGTTCAAACACATCAATTCCACAATATGTAAGCTAGTGATCCGATGTTTCTATTACACTTTGAGTTTAGAGGCTAGTTTAACTTTAAAATAGATTTGGCTCATTAATCTTCAAACAAAAATTCCGTCGATTAGTTTAGTAGAAAAATGTTATAAATTTCAAGTTGCTTTACACTTTTAAAAGAACAAATTGAGTGATATGACTTTTGTTAATGAGTTGAGAATCTAAGCTTACTTAATTAGTAATAACTAATTGACTAAAGGGTATTTATAACAATGAACCACATGATTTAGAGTTGTTAGTAAAATCATGGATTTAGAGTTTGTTACATTTTAAGCATAGATTTAGATTTGTAGTGTTGGAAAATTTGTAAAGAAAAGATTGAAAGGTAAGTCAAAAAATTCTGGAAAAAAAAAGAGCATATGCTTGCTAGTTTGTTATGTACTAGTTTTGGAATTTGGATGAATCACATGTAATTAATTTTGCTTGAAAATAGACTAAAAATTAGAGTTTAGAAGGAATCAATTGGTTCAAATTTGTAGTATGAGAGTCCTGAATTTTTTATGTCCCAAATAGAGTTGAGACTTGTAGTTGGAGTTTTATGAGCATGGTTTTTATTTATCTTAGTCTTACCACTTGTTTCTTGTACCTTATTGATCCTATTGGCTCTCTTGGGTAGACCAAAGTTATCATTGCATATAAATTCTTAATAAATAGAACATACTAATCATGTGAATAACCTTCTTTTTGGCTGGTAGAGATTCTAGTGAGTTTTTTTTTTTTTTCCCTAATACTATTATATTTCAAACATGACAACTTTAGTTTTCATTTTCTTTTCTCCTTTCCCATCTTATAAATAAGTTGCTAACTAATTTCAATTTGTATAAATATAACTTCTTCTGAAATTACCCAATTGCATGTCTCTTCCTCTTGTAACATGGTTGTAGAAGATGAAATCCTCATGTTCACTGGTAAAGACTTCACCTTCTCATATAAATAATCGCTAAAGAAAATCCTAGAAATTAAACCATATTTCTTTCAATGAGTTTTTATTGATGAAACTACTATTATAGCACTTTCAGGCACAAGATTTCCTAGATAAAGTGAAAAAAAATTATTTTAATTGATGGTGAAGGGTTTGGAGCTTGGTGTTAGTATAAAACAATCCTAGTTGAAATTGAAACGTGGGGAAAAACGCAGGTTAGATTCCACTCATAGAAACTATTTGGACGAGTTCCTATTCCAATGATGAGTTTATGAGTTTATGTTTTCAAATTTAACTAAAGTTAATCTTTGAAAGATATAGCTTGATATTGGATGTAATATCCTATGTAATTGTTATGTGGCTTTTCTTTTGTTGTTATTGTGGTCAATAGCGAGATACACTGTATGTTCATTTGAAATTAGACGTAATGAGAAGATTACTTGCTATGTCATCGTTGAGGTGAGAAGGCGATGCAACTTTTGGAAAGTGGGTTGAAGGTTACGGAGTATGAGTTGCTTCGCAGGAACTTCAGTGACACTGGATGCTTTGACTTTGGTCTTCGGGACCACATTGATATTGGAATCAAGTAAGCCTTTATACTTTCGAATATCCTTTTAAGTTATGTTTCAAAATTTGTATGAAACTTACTGTTAAGTCTTCAATCTGTTTGGAGATTTATAATCTGTTTTTCTTAGGTGATTCGGTTTTGTATTGCGTATGAGTGTAGTTAACTTGAAATGAAACATTCATTGGGATGAGGTTTTCAGCACTAACTCTCTCTTTGAATGGGGATGGGTGATGCTTGATTATCTATAGCTGAAGAAGATATAGGGATTGATATTTTCTATGGAGTTGGGGTTGGGAACATGGATGGAGCTCTCAGGATCTGTCCTGAAGAGTTTTATCCCTATCTGCGACAATCTCTTGTGGGGATAAAAACTTTCTGTAGGATTGGGGATAAGGAGCCAGGGTAG

mRNA sequence

ATGCCCAACAACACCTCCGAACCTTCTGTGACCGACTGCACCAACCCCGTCGAAGAACCCACAACCTCGCTATCAGAGCACTCCAATGGAGCCTTTGAGGTCTTATCATCGTTTGCCTTTGTCACCTTATCACCTCTCCCATCGCCTCACTTGCGAATGCACAGGATTCTTAATTGGGATTCAACGATTTTTGAAGCAGATTGTGAGAAGGCGATGCAACTTTTGGAAAGTGGGTTGAAGGTTACGGAGTATGAGTTGCTTCGCAGGAACTTCAGTGACACTGGATGCTTTGACTTTGCTGAAGAAGATATAGGGATTGATATTTTCTATGGAGTTGGGGTTGGGAACATGGATGGAGCTCTCAGGATCTGTCCTGAAGAGTTTTATCCCTATCTGCGACAATCTCTTGTGGGGATAAAAACTTTCTGTAGGATTGGGGATAAGGAGCCAGGGTAG

Coding sequence (CDS)

ATGCCCAACAACACCTCCGAACCTTCTGTGACCGACTGCACCAACCCCGTCGAAGAACCCACAACCTCGCTATCAGAGCACTCCAATGGAGCCTTTGAGGTCTTATCATCGTTTGCCTTTGTCACCTTATCACCTCTCCCATCGCCTCACTTGCGAATGCACAGGATTCTTAATTGGGATTCAACGATTTTTGAAGCAGATTGTGAGAAGGCGATGCAACTTTTGGAAAGTGGGTTGAAGGTTACGGAGTATGAGTTGCTTCGCAGGAACTTCAGTGACACTGGATGCTTTGACTTTGCTGAAGAAGATATAGGGATTGATATTTTCTATGGAGTTGGGGTTGGGAACATGGATGGAGCTCTCAGGATCTGTCCTGAAGAGTTTTATCCCTATCTGCGACAATCTCTTGTGGGGATAAAAACTTTCTGTAGGATTGGGGATAAGGAGCCAGGGTAG

Protein sequence

MPNNTSEPSVTDCTNPVEEPTTSLSEHSNGAFEVLSSFAFVTLSPLPSPHLRMHRILNWDSTIFEADCEKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQSLVGIKTFCRIGDKEPG

Homology

[Close]

BLAST of Spg023782 vs. NCBI nr
Match: VDC60185.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 71.6 bits (174), Expect = 6.4e-09
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEF 128
           +KAMQLLESGLKV EYELLRRNFSDTGCF F  + I  D F G G+   D +  I   +F
Sbjct: 66  DKAMQLLESGLKVKEYELLRRNFSDTGCFGFGLDLIIYDDFTGFGLDWYDPSTGIYGMDF 125

Query: 129 YPYLRQ 135
           Y  L +
Sbjct: 126 YVVLER 131

[Close]

BLAST of Spg023782 vs. NCBI nr
Match: KAG5243721.1 (60S ribosomal protein [Salix suchowensis])

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-08
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICP 128
           +KAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD       
Sbjct: 76  DKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFM----- 135

Query: 129 EEFYPYLRQSLVGIKTFCR 145
             FY ++R+ ++ +   C+
Sbjct: 136 --FYVWIRRYVLAVAGRCK 147

[Close]

BLAST of Spg023782 vs. NCBI nr
Match: GEV60664.1 (60S ribosomal protein L11 [Tanacetum cinerariifolium])

HSP 1 Score: 68.2 bits (165), Expect = 7.1e-08
Identity = 35/53 (66.04%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFA---EEDIGIDIFYGVGVGNMD 119
           +KAMQLLESGLK+ EYELLRRNFSDTGCFDF    + D+GI      GV  MD
Sbjct: 225 DKAMQLLESGLKIKEYELLRRNFSDTGCFDFGIHEQIDLGIKYDPSTGVYGMD 277

[Close]

BLAST of Spg023782 vs. NCBI nr
Match: VDC90723.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 67.8 bits (164), Expect = 9.3e-08
Identity = 39/66 (59.09%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEF 128
           +KAMQLLESGLKV EYELLRRNFSDTGCF F  E I  D F G   G  D +  I   +F
Sbjct: 121 DKAMQLLESGLKVKEYELLRRNFSDTGCFGFDVELIKDDGFTGF-CGMYDPSTGIYGMDF 180

Query: 129 YPYLRQ 135
           Y  L +
Sbjct: 181 YVVLER 185

[Close]

BLAST of Spg023782 vs. NCBI nr
Match: XP_021306147.1 (60S ribosomal protein L11 [Sorghum bicolor])

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-07
Identity = 39/79 (49.37%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICP 128
           EKAMQLLESGLKV EYELLRRNFS+TGCF F  +   D+GI      G+  MD       
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMD------- 135

Query: 129 EEFYPYLRQSLVGIKTFCR 145
             FY  L ++   +   CR
Sbjct: 136 --FYVVLERAGYRVARRCR 145

[Close]

BLAST of Spg023782 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-10
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

[Close]

BLAST of Spg023782 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-10
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

[Close]

BLAST of Spg023782 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.0e-10
Identity = 34/53 (64.15%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           +KAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Sbjct: 76  DKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

[Close]

BLAST of Spg023782 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 7.9e-10
Identity = 34/53 (64.15%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFS+TGCF F  +   D+GI      G+  MD
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

[Close]

BLAST of Spg023782 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.9e-10
Identity = 34/53 (64.15%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFS+TGCF F  +   D+GI      G+  MD
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

[Close]

BLAST of Spg023782 vs. ExPASy TrEMBL
Match: M4DM59 (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEF 128
           +KAMQLLESGLKV EYELLRRNFSDTGCF F  + I  D F G G+   D +  I   +F
Sbjct: 66  DKAMQLLESGLKVKEYELLRRNFSDTGCFGFGLDLIIYDDFTGFGLDWYDPSTGIYGMDF 125

Query: 129 YPYLRQ 135
           Y  L +
Sbjct: 126 YVVLER 131

[Close]

BLAST of Spg023782 vs. ExPASy TrEMBL
Match: A0A3P5YBW7 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA09T37796Z PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEF 128
           +KAMQLLESGLKV EYELLRRNFSDTGCF F  + I  D F G G+   D +  I   +F
Sbjct: 66  DKAMQLLESGLKVKEYELLRRNFSDTGCFGFGLDLIIYDDFTGFGLDWYDPSTGIYGMDF 125

Query: 129 YPYLRQ 135
           Y  L +
Sbjct: 126 YVVLER 131

[Close]

BLAST of Spg023782 vs. ExPASy TrEMBL
Match: A0A3P6ASP0 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA02T07964Z PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.5e-08
Identity = 39/66 (59.09%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEF 128
           +KAMQLLESGLKV EYELLRRNFSDTGCF F  E I  D F G   G  D +  I   +F
Sbjct: 121 DKAMQLLESGLKVKEYELLRRNFSDTGCFGFDVELIKDDGFTGF-CGMYDPSTGIYGMDF 180

Query: 129 YPYLRQ 135
           Y  L +
Sbjct: 181 YVVLER 185

[Close]

BLAST of Spg023782 vs. ExPASy TrEMBL
Match: A0A1U7YW84 (60S ribosomal protein L11-1-like OS=Nelumbo nucifera OX=4432 GN=LOC104588491 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 7.6e-08
Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKA QLLESGLKV EYELLRRNFSDTGCF F+ +   D+GI+    +G+  MD
Sbjct: 78  EKAKQLLESGLKVKEYELLRRNFSDTGCFSFSIQEHIDLGINYDPSIGIYGMD 130

[Close]

BLAST of Spg023782 vs. ExPASy TrEMBL
Match: A0A194YJK4 (Uncharacterized protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G163100 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 7.6e-08
Identity = 39/79 (49.37%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICP 128
           EKAMQLLESGLKV EYELLRRNFS+TGCF F  +   D+GI      G+  MD       
Sbjct: 86  EKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMD------- 145

Query: 129 EEFYPYLRQSLVGIKTFCR 145
             FY  L ++   +   CR
Sbjct: 146 --FYVVLERAGYRVARRCR 155

[Close]

BLAST of Spg023782 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

[Close]

BLAST of Spg023782 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

[Close]

BLAST of Spg023782 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

[Close]

BLAST of Spg023782 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Sbjct: 66  EKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 118

[Close]

BLAST of Spg023782 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 35/53 (66.04%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 69  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD 119
           EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Sbjct: 76  EKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

The following BLAST results are available for this feature:

BLAST of Spg023782 vs. NCBI nr


Match Name	E-value	Identity	Description
VDC60185.1	6.4e-09	57.58	unnamed protein product [Brassica rapa]	[more]
KAG5243721.1	2.4e-08	48.10	60S ribosomal protein [Salix suchowensis]	[more]
GEV60664.1	7.1e-08	66.04	60S ribosomal protein L11 [Tanacetum cinerariifolium]	[more]
VDC90723.1	9.3e-08	59.09	unnamed protein product [Brassica rapa]	[more]
XP_021306147.1	1.6e-07	49.37	60S ribosomal protein L11 [Sorghum bicolor]	[more]

BLAST of Spg023782 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42795	2.7e-10	66.04	60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2	[more]
P42794	2.7e-10	66.04	60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2	[more]
P46287	6.0e-10	64.15	60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1	[more]
A2YDY2	7.9e-10	64.15	60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S...	[more]
Q0DK10	7.9e-10	64.15	60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2...	[more]

BLAST of Spg023782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M4DM59	3.1e-09	57.58	Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1	[more]
A0A3P5YBW7	3.1e-09	57.58	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA09T37796Z PE=3 SV=...	[more]
A0A3P6ASP0	4.5e-08	59.09	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA02T07964Z PE=3 SV=...	[more]
A0A1U7YW84	7.6e-08	64.15	60S ribosomal protein L11-1-like OS=Nelumbo nucifera OX=4432 GN=LOC104588491 PE=...	[more]
A0A194YJK4	7.6e-08	49.37	Uncharacterized protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G163100 PE=3 SV=...	[more]

BLAST of Spg023782 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42740.1	1.9e-11	66.04	ribosomal protein large subunit 16A	[more]
AT3G58700.1	1.9e-11	66.04	Ribosomal L5P family protein	[more]
AT4G18730.1	1.9e-11	66.04	ribosomal protein L16B	[more]
AT5G45775.1	1.9e-11	66.04	Ribosomal L5P family protein	[more]
AT5G45775.2	1.9e-11	66.04	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR11994:SF29	60S RIBOSOMAL PROTEIN L11	coord: 68..118
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 68..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023782.1	Spg023782.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome