Spg023771 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023771
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ycf20-like protein
Location	scaffold13: 7267151 .. 7269451 (+)
RNA-Seq Expression	Spg023771
Synteny	Spg023771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGGCTAAAAGATGAACGACGATTGCCTATCCGATGTCCAAGGTACGGCGCCAAAATCCGCCCACATGGCTGAGCGCCGATTGATGGAAGAGACGAACAGTTCTTGCAGCCAAACCTCCATGGGAGCAGAGTGAAAGATAATCTGAGTGAGAGGTTGCTTGGGCTCGGATACTGATCAGTAAGCCGCTATTCAACCTATTTCATGATTTTGTGGTCAATATCAATTCAGATTTCTCCAATTTCCCCTCTCTGCGAACTGTTGTTTGATTGATAGAATTTTAATTAGGTTTGCTGAAAATTGGTTAAGGCCCTGCATATCGACGACTGAATCGTTATATTTCTGTGTAATTTAGAGTATGCATGAAGGATTGTGGCTAAAAGATTTATTGAAATTGAAAATTTTGATGTTAGGGAGGATTCTTTGTGAAGGAACTGTCAGCTTCAAATAGCAACTGAAAGCATATGAAACTCATTAAGCTTCCGTTCATCTTGTTATCCTCTCTTGGAAATAACCAAGGCCTGAAGGATTAGATGGTGATGATTTCGCTGATTGTAAGAAGATTATGTATAAATAAGCTTTGTTCATCAGTAAAATTACTTGAATGTTGCTTGCAGTTCAAGATAATGTAATGGCAACTCCAATGAGGTTGTTATGCACCCATCCACGAACTATTATTAAGCTTCAATCTCCAAAATATGTGAAAACAAGAGTTTCTGTTCCGGGCCTCGCAGCATGCTTTTACAACACTTATGTGTTCCATGGTCAACTTCACCATCAGTGTTGTTCCTTCTATGTAACCAAACCTTCAGTGCTAAAGAACTTCAAGTAAGTTACTGTGATGGTGGATATCCTATTGTTTACTTATGGTAGTTGTAGTTGCTAGGGTCTAGGTTAGTTATGCAATTCTTATTTGGCGTTAGGAGCATCGATATGTTGAATTTAACGCATCTGATGATTCCCCTCAATTTCAAAGTAGTTCAAGAATGCAAATGATAAAGTCAGTCATGCAGCTTCTTGTTTTCTGCATCTCTCAATCATTGTGCTTTGTGAATTGTACTCTGTAGTTTCCATACTTGGTAGAACACTTAAACTTCACAAGCTCATCACAAAGCATACATAAAAATGTTGTTGGGCCATTGGCAACACAAGGGAATTAATGATCGTATACTTAAGGATTCATTTCAAAGGGCAACGGTGATGGTCATATATGAAAGACAACAGATGGCATGATGTTGAACGAATATTCTCATAGCTCACCACAGGAGTGAACTTTTAAGCTATATTTAAGAATACTTGGATAGAAACTTCATTTTAAGATTAGTCTATGTTTGTAATTTGTTATTATTCTTTTTGGTACAGGAAGATGGCCTTGTCCATTAGGAGCAGTGTGGAAGGGAGTCCATTTGATCCTCCTTCAAATAGCTCCAATGGCAGAACGAGACTGATAAGGATTATTCAAGCTATTCAAACCAAGTTGAATGCGAGAATCAACGAGTTAAGGAAAAATCTTCCATTGAAGATACTCTTCTTCTTGGTTGGGTTTTACAGTGCAACTGCATTTGCAACTGTTATTGGTCAAACAGGTGACTGGGATGTTCTATCTGCTGCATTGGCTGTGGTTATTGTGGAGGGGATTGGGGCCCTCATGTATAGGGCTTCTCTTCCTCTTTTGAACAAGATTAAAGGCCTAATAACCATGTTCAATTATTGGAAGGCTGGGCTTTCCATGGGTCTTTTCTTGGATTCTTTTAAATATGAAATGGATGACATTTTTGGGTTACATAACCTCTTCCATTTATACTTAGAAAATGTATTTCATATATTTTTTTAACACATTCGTGGCTGTATATCTTCAAATTCCATTAACTTGGGTTTATTTTGTTCCAAGTTCTGAGTACAGAATCTACAGATGATTGGCACATCCAATTCATGGATCTGAAGCCCTGGGAAAAACATGGTCGCTGTTTGAAGGTTTTTCTAAGAACTGTGAGTAACTTAAGAAAGCTTTTGGATTCCCATTGTCAAACCAACTAGCTAGACCTTCTGACTTGTGAATTGTAGGGTCTTTGGTAAAATGCTGAAACTAAATACGATGGTTGGCGGGGGGGAGGGGAGAACTCTATAGTCTATCCGTTTAAACACTAGAACTTTCTCCCAGTATTTGAAAAGTCTGAACATTTTAGGTTTCTTTTTTTCCCATTCATCAAATTCAATCAGTTTCTTTTAGAAAGATATCCTACTCTTTTGCAAAATACTTATATTTTCTCTAATGTTCTGGTGTAGCCGACTGATGCTTAA

mRNA sequence

ATGTTGCTTGCAGTTCAAGATAATGTAATGGCAACTCCAATGAGGTTGTTATGCACCCATCCACGAACTATTATTAAGCTTCAATCTCCAAAATATGTGAAAACAAGAGTTTCTGTTCCGGGCCTCGCAGCATGCTTTTACAACACTTATGTGTTCCATGGTCAACTTCACCATCAGTGTTGTTCCTTCTATGTAACCAAACCTTCAGTGCTAAAGAACTTCAAGAAGATGGCCTTGTCCATTAGGAGCAGTGTGGAAGGGAGTCCATTTGATCCTCCTTCAAATAGCTCCAATGGCAGAACGAGACTGATAAGGATTATTCAAGCTATTCAAACCAAGTTGAATGCGAGAATCAACGAGTTAAGGAAAAATCTTCCATTGAAGATACTCTTCTTCTTGGTTGGGTTTTACAGTGCAACTGCATTTGCAACTGTTATTGGTCAAACAGGTGACTGGGATGTTCTATCTGCTGCATTGGCTGTGGTTATTGTGGAGGGGATTGGGGCCCTCATGTATAGGGCTTCTCTTCCTCTTTTGAACAAGATTAAAGGCCTAATAACCATGTTCAATTATTGGAAGGCTGGGCTTTCCATGGAATCTACAGATGATTGGCACATCCAATTCATGGATCTGAAGCCCTGGGAAAAACATGGTCGCTGTTTGAAGGTTTTTCTAAGAACTCCGACTGATGCTTAA

Coding sequence (CDS)

ATGTTGCTTGCAGTTCAAGATAATGTAATGGCAACTCCAATGAGGTTGTTATGCACCCATCCACGAACTATTATTAAGCTTCAATCTCCAAAATATGTGAAAACAAGAGTTTCTGTTCCGGGCCTCGCAGCATGCTTTTACAACACTTATGTGTTCCATGGTCAACTTCACCATCAGTGTTGTTCCTTCTATGTAACCAAACCTTCAGTGCTAAAGAACTTCAAGAAGATGGCCTTGTCCATTAGGAGCAGTGTGGAAGGGAGTCCATTTGATCCTCCTTCAAATAGCTCCAATGGCAGAACGAGACTGATAAGGATTATTCAAGCTATTCAAACCAAGTTGAATGCGAGAATCAACGAGTTAAGGAAAAATCTTCCATTGAAGATACTCTTCTTCTTGGTTGGGTTTTACAGTGCAACTGCATTTGCAACTGTTATTGGTCAAACAGGTGACTGGGATGTTCTATCTGCTGCATTGGCTGTGGTTATTGTGGAGGGGATTGGGGCCCTCATGTATAGGGCTTCTCTTCCTCTTTTGAACAAGATTAAAGGCCTAATAACCATGTTCAATTATTGGAAGGCTGGGCTTTCCATGGAATCTACAGATGATTGGCACATCCAATTCATGGATCTGAAGCCCTGGGAAAAACATGGTCGCTGTTTGAAGGTTTTTCTAAGAACTCCGACTGATGCTTAA

Protein sequence

MLLAVQDNVMATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPSVLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLSMESTDDWHIQFMDLKPWEKHGRCLKVFLRTPTDA

Homology

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BLAST of Spg023771 vs. NCBI nr
Match: KAG6574801.1 (Syntaxin-61, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 351.7 bits (901), Expect = 4.9e-93
Identity = 183/198 (92.42%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 1   MLLAVQDNVMATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQC 60
           +LLAVQDNVMA PMRLL T+PRT  KLQSPKY KTRVSVPGLAACFYNTYV HGQLHHQ 
Sbjct: 341 LLLAVQDNVMAFPMRLLSTYPRT-SKLQSPKYAKTRVSVPGLAACFYNTYVLHGQLHHQS 400

Query: 61  CSFYVTKPSVLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINE 120
            SFYVTKPSVLKNFKKMALSIRSSVE SPFDPPSNSSNGRTRL RII AIQTKLNARINE
Sbjct: 401 LSFYVTKPSVLKNFKKMALSIRSSVEESPFDPPSNSSNGRTRLTRIISAIQTKLNARINE 460

Query: 121 LRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLN 180
           LRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAV +VEGIGALMYRASLPLLN
Sbjct: 461 LRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVAVVEGIGALMYRASLPLLN 520

Query: 181 KIKGLITMFNYWKAGLSM 199
           KIKGLITMFNYWKAGLSM
Sbjct: 521 KIKGLITMFNYWKAGLSM 537

[Close]

BLAST of Spg023771 vs. NCBI nr
Match: XP_038875295.1 (uncharacterized protein LOC120067784 isoform X1 [Benincasa hispida])

HSP 1 Score: 337.8 bits (865), Expect = 7.3e-89
Identity = 176/196 (89.80%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 3   LAVQDNVMATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCS 62
           L VQDNVMA   RLL T+PRT  KLQSP Y KTR SV GL ACFY+TYV HGQLHHQ CS
Sbjct: 34  LRVQDNVMAISTRLLSTYPRT-SKLQSPNYAKTRGSVSGLVACFYDTYVLHGQLHHQYCS 93

Query: 63  FYVTKPSVLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELR 122
            YVTKPSVLKNFKKMALSIR SVEGSPFDPPSN+SNGRTRLIRIIQAIQTKLNARINELR
Sbjct: 94  CYVTKPSVLKNFKKMALSIRGSVEGSPFDPPSNNSNGRTRLIRIIQAIQTKLNARINELR 153

Query: 123 KNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKI 182
           KNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVV+VEGIGALMYRASLPLLNKI
Sbjct: 154 KNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVVVEGIGALMYRASLPLLNKI 213

Query: 183 KGLITMFNYWKAGLSM 199
           KGLITMFNYWKAGLSM
Sbjct: 214 KGLITMFNYWKAGLSM 228

[Close]

BLAST of Spg023771 vs. NCBI nr
Match: XP_022959269.1 (uncharacterized protein LOC111460299 [Cucurbita moschata])

HSP 1 Score: 337.0 bits (863), Expect = 1.3e-88
Identity = 175/189 (92.59%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 10  MATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPS 69
           MA PMRLL T+PRT  KLQSPKY KTRVSVPGLAACFYNTYV HGQLHHQ  SFYVTKPS
Sbjct: 1   MAFPMRLLSTYPRT-SKLQSPKYAKTRVSVPGLAACFYNTYVLHGQLHHQSLSFYVTKPS 60

Query: 70  VLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 129
           VLKNFKKMALSIRSSVE SPFDPPSNSSNGRTRL RII AIQTKLNARINELRKNLPLKI
Sbjct: 61  VLKNFKKMALSIRSSVEESPFDPPSNSSNGRTRLTRIISAIQTKLNARINELRKNLPLKI 120

Query: 130 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMF 189
           LFFLVGFYSATAFATVIGQTGDWDVLSAALAV +VEGIGALMYRASLPLLNKIKGLITMF
Sbjct: 121 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVAVVEGIGALMYRASLPLLNKIKGLITMF 180

Query: 190 NYWKAGLSM 199
           NYWKAGLSM
Sbjct: 181 NYWKAGLSM 188

[Close]

BLAST of Spg023771 vs. NCBI nr
Match: XP_004145006.1 (ycf20-like protein [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 6.2e-88
Identity = 170/189 (89.95%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 10  MATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPS 69
           MAT MRLL T+PRT  KLQSP Y +TRVSVPGL ACFY+TYV HG LHHQCCSFYVTKPS
Sbjct: 1   MATSMRLLSTYPRT-SKLQSPNYPRTRVSVPGLVACFYDTYVLHGHLHHQCCSFYVTKPS 60

Query: 70  VLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 129
           VLKNFKKMALSIR SVEG+PFDPPS++SNGRTRLIRIIQAIQTKLNARINELRKNLPLKI
Sbjct: 61  VLKNFKKMALSIRGSVEGNPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 120

Query: 130 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMF 189
           LFFLVGFYSATAFATVIGQTGDWD+LSAALAVV+VEGIGALMYRASLPLLNKIK LITMF
Sbjct: 121 LFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKDLITMF 180

Query: 190 NYWKAGLSM 199
           NYWKAGLSM
Sbjct: 181 NYWKAGLSM 188

[Close]

BLAST of Spg023771 vs. NCBI nr
Match: KGN46257.2 (hypothetical protein Csa_004976 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 6.2e-88
Identity = 170/189 (89.95%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 10  MATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPS 69
           MAT MRLL T+PRT  KLQSP Y +TRVSVPGL ACFY+TYV HG LHHQCCSFYVTKPS
Sbjct: 1   MATSMRLLSTYPRT-SKLQSPNYPRTRVSVPGLVACFYDTYVLHGHLHHQCCSFYVTKPS 60

Query: 70  VLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 129
           VLKNFKKMALSIR SVEG+PFDPPS++SNGRTRLIRIIQAIQTKLNARINELRKNLPLKI
Sbjct: 61  VLKNFKKMALSIRGSVEGNPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 120

Query: 130 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMF 189
           LFFLVGFYSATAFATVIGQTGDWD+LSAALAVV+VEGIGALMYRASLPLLNKIK LITMF
Sbjct: 121 LFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKDLITMF 180

Query: 190 NYWKAGLSM 199
           NYWKAGLSM
Sbjct: 181 NYWKAGLSM 188

[Close]

BLAST of Spg023771 vs. ExPASy Swiss-Prot
Match: O80813 (Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 2.2e-19
Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 62  SFYVTKPSVLKNFKKMALSIRSSVEGSPFDPPSNSSN----GRTRLIRIIQAIQTKLNAR 121
           SF + +P+    F   AL   SS+ G   +    + +    G TRL RI  A   +L  +
Sbjct: 47  SFQIRRPNRKIAF---ALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIAIAGGKQLLGK 106

Query: 122 INELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYR--AS 181
           IN  RKN P+KI   L+GFY+A A AT++GQTGDWDVL A + V  +EGIG LMY+  +S
Sbjct: 107 INSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSS 166

Query: 182 LPLLNKIKGLITMFNYWKAGLSM 199
                K++  +   N+WKAG+ +
Sbjct: 167 SMFSGKLQSFVVFMNFWKAGVCL 186

[Close]

BLAST of Spg023771 vs. ExPASy Swiss-Prot
Match: Q9MUL5 (Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 101 TRLIRIIQAIQTKLNARINELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALA 160
           TRL      I   L+++I     N P+KIL  L+GF+ AT  ATV GQTGDWDVL A + 
Sbjct: 4   TRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVAGIL 63

Query: 161 VVIVEGIGALMY 173
           V ++E +G  MY
Sbjct: 64  VAMIEILGNKMY 75

[Close]

BLAST of Spg023771 vs. ExPASy Swiss-Prot
Match: Q1XDS2 (Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 29/98 (29.59%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 100 RTRLIRIIQAIQTKLNARINELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAAL 159
           +TRL      +   LN ++      L   ++  L+GF+ +T  +T+ GQTGDW +++A+L
Sbjct: 3   KTRLSTFFAYLIKNLNNKLYYSLSELTTGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 160 AVVIVEGIGALMYRASLPLLNKIKGLITMFNYWKAGLS 198
            V   E    ++Y +   L  K    I +FN +K G++
Sbjct: 63  IVAATELTSKIVYSSHKQLNIK----INLFNNFKIGIT 96

[Close]

BLAST of Spg023771 vs. ExPASy Swiss-Prot
Match: P51214 (Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.4e-04
Identity = 28/87 (32.18%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 107 IQAIQTKLNARINELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEG 166
           +Q + ++L   +NEL   L    +  L+GF+ +T  +T+ GQTGDW +++A+L V  +E 
Sbjct: 14  VQNLSSRLYYSLNELTAGL----ISLLLGFFISTGLSTIPGQTGDWGIIAASLIVAAIEL 73

Query: 167 IGALMYR------ASLPLLNKIKGLIT 188
           +  ++Y         + LLN +K  IT
Sbjct: 74  VSKIVYSNKKKYGVRINLLNNLKIGIT 96

[Close]

BLAST of Spg023771 vs. ExPASy Swiss-Prot
Match: P72983 (Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1509 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.8e-04
Identity = 26/79 (32.91%), Postives = 40/79 (50.63%), Query Frame = 0


Query: 100 RTRLIRIIQAIQTKLNARINELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAAL 159
           RTRL  I++    +L+       + + L +L FL GF+  TA AT  GQ   WDV+ AA 
Sbjct: 3   RTRLNTIVEVRGQQLSQFFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAF 62

Query: 160 AVVIVEGIGALMYRASLPL 179
            ++  E +    YR  + +
Sbjct: 63  ILLFCELVNRWFYRRGVKM 81

[Close]

BLAST of Spg023771 vs. ExPASy TrEMBL
Match: A0A6J1H7K4 (uncharacterized protein LOC111460299 OS=Cucurbita moschata OX=3662 GN=LOC111460299 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 6.1e-89
Identity = 175/189 (92.59%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 10  MATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPS 69
           MA PMRLL T+PRT  KLQSPKY KTRVSVPGLAACFYNTYV HGQLHHQ  SFYVTKPS
Sbjct: 1   MAFPMRLLSTYPRT-SKLQSPKYAKTRVSVPGLAACFYNTYVLHGQLHHQSLSFYVTKPS 60

Query: 70  VLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 129
           VLKNFKKMALSIRSSVE SPFDPPSNSSNGRTRL RII AIQTKLNARINELRKNLPLKI
Sbjct: 61  VLKNFKKMALSIRSSVEESPFDPPSNSSNGRTRLTRIISAIQTKLNARINELRKNLPLKI 120

Query: 130 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMF 189
           LFFLVGFYSATAFATVIGQTGDWDVLSAALAV +VEGIGALMYRASLPLLNKIKGLITMF
Sbjct: 121 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVAVVEGIGALMYRASLPLLNKIKGLITMF 180

Query: 190 NYWKAGLSM 199
           NYWKAGLSM
Sbjct: 181 NYWKAGLSM 188

[Close]

BLAST of Spg023771 vs. ExPASy TrEMBL
Match: A0A0A0K9U0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077990 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.0e-88
Identity = 170/189 (89.95%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 10  MATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPS 69
           MAT MRLL T+PRT  KLQSP Y +TRVSVPGL ACFY+TYV HG LHHQCCSFYVTKPS
Sbjct: 1   MATSMRLLSTYPRT-SKLQSPNYPRTRVSVPGLVACFYDTYVLHGHLHHQCCSFYVTKPS 60

Query: 70  VLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 129
           VLKNFKKMALSIR SVEG+PFDPPS++SNGRTRLIRIIQAIQTKLNARINELRKNLPLKI
Sbjct: 61  VLKNFKKMALSIRGSVEGNPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 120

Query: 130 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMF 189
           LFFLVGFYSATAFATVIGQTGDWD+LSAALAVV+VEGIGALMYRASLPLLNKIK LITMF
Sbjct: 121 LFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKDLITMF 180

Query: 190 NYWKAGLSM 199
           NYWKAGLSM
Sbjct: 181 NYWKAGLSM 188

[Close]

BLAST of Spg023771 vs. ExPASy TrEMBL
Match: A0A6J1L1A0 (uncharacterized protein LOC111498957 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498957 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.5e-87
Identity = 173/189 (91.53%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 10  MATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPS 69
           MA PMRLL  +PRT  KLQSPKY KTRVSVPGLAACFYNTYV HGQLHH   SFYVTKPS
Sbjct: 1   MAFPMRLLSPYPRT-SKLQSPKYAKTRVSVPGLAACFYNTYVLHGQLHHHSFSFYVTKPS 60

Query: 70  VLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 129
           VLKNFKKMALSIRSSVE SPFDPPSNSSNGRTRL RII AIQTKLNARINELRKNLPLKI
Sbjct: 61  VLKNFKKMALSIRSSVEESPFDPPSNSSNGRTRLTRIISAIQTKLNARINELRKNLPLKI 120

Query: 130 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMF 189
           LFFLVGFYSATAFATVIGQTGDWDVLSAALAV +VEGIGALMYRASLPLLNKIKGLITMF
Sbjct: 121 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVAVVEGIGALMYRASLPLLNKIKGLITMF 180

Query: 190 NYWKAGLSM 199
           NYWKAGLSM
Sbjct: 181 NYWKAGLSM 188

[Close]

BLAST of Spg023771 vs. ExPASy TrEMBL
Match: A0A1S3CBS0 (ycf20-like protein OS=Cucumis melo OX=3656 GN=LOC103499014 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.4e-82
Identity = 165/189 (87.30%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 10  MATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPS 69
           MAT MRLL T+PRT  KLQSP Y +TRVSVPGL ACF+        LHHQCCSFYVTKPS
Sbjct: 1   MATSMRLLSTYPRT-SKLQSPNYQRTRVSVPGLVACFH--------LHHQCCSFYVTKPS 60

Query: 70  VLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 129
           VLKNFKKMALSIR SVEGSPFDPPS++SNGRTRLIRIIQAIQTKLNARINELRKNLP KI
Sbjct: 61  VLKNFKKMALSIRGSVEGSPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPFKI 120

Query: 130 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMF 189
           LFFLVGFYSATAFATVIGQTGDWD+LSAALAVV+VEGIGALMYRASLPLLNKIKGLITMF
Sbjct: 121 LFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKGLITMF 180

Query: 190 NYWKAGLSM 199
           NYWKAGLSM
Sbjct: 181 NYWKAGLSM 180

[Close]

BLAST of Spg023771 vs. ExPASy TrEMBL
Match: A0A6J1DQ25 (ycf20-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022766 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 6.1e-81
Identity = 164/189 (86.77%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 10  MATPMRLLCTHPRTIIKLQSPKYVKTRVSVPGLAACFYNTYVFHGQLHHQCCSFYVTKPS 69
           M TPMR L T+PRTI+ LQSPK V +R+SVPGLA CFY+T+VF G+ HHQC SF V KPS
Sbjct: 1   METPMR-LSTYPRTIM-LQSPKGVTSRLSVPGLAECFYDTHVFCGKHHHQCYSFSVAKPS 60

Query: 70  VLKNFKKMALSIRSSVEGSPFDPPSNSSNGRTRLIRIIQAIQTKLNARINELRKNLPLKI 129
           VLKNFKKMALSIRSSVEGSPFDPP NSSNG TRLIRIIQAIQTKL+A+INELRKNLPLKI
Sbjct: 61  VLKNFKKMALSIRSSVEGSPFDPPPNSSNGGTRLIRIIQAIQTKLDAKINELRKNLPLKI 120

Query: 130 LFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRASLPLLNKIKGLITMF 189
            FFLVGFYSATAFATVIGQTGDWDVLSAALAVV+VEGIGALMYRASLPLLNKIKGLITMF
Sbjct: 121 FFFLVGFYSATAFATVIGQTGDWDVLSAALAVVVVEGIGALMYRASLPLLNKIKGLITMF 180

Query: 190 NYWKAGLSM 199
           NYWKAGLSM
Sbjct: 181 NYWKAGLSM 187

[Close]

BLAST of Spg023771 vs. TAIR 10
Match: AT3G56830.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 79/144 (54.86%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 60  CCSFYVTKPSVLKNFKKMA-LSIRSSVEGSPFDPPSNSSNGRT----RLIRIIQAIQTKL 119
           C   +  +P ++++ ++M+  +I+SSV G  FDP S SS+  +    RLI+ IQ +++KL
Sbjct: 36  CHFLHPAQPLLVRHQRRMSWTTIKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKL 95

Query: 120 NARINELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRA 179
             +I E++K+LP K+ F LVGFYSATAF+T IGQTGDWDVLSA LAV++VE IGALMYRA
Sbjct: 96  LVKIQEIKKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRA 155

Query: 180 SLPLLNKIKGLITMFNYWKAGLSM 199
           S+PL+NK++  ITMFNYWK GL++
Sbjct: 156 SIPLINKMRSTITMFNYWKTGLAL 179

[Close]

BLAST of Spg023771 vs. TAIR 10
Match: AT3G56830.2 (Protein of unknown function (DUF565) )

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 79/144 (54.86%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 60  CCSFYVTKPSVLKNFKKMA-LSIRSSVEGSPFDPPSNSSNGRT----RLIRIIQAIQTKL 119
           C   +  +P ++++ ++M+  +I+SSV G  FDP S SS+  +    RLI+ IQ +++KL
Sbjct: 36  CHFLHPAQPLLVRHQRRMSWTTIKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKL 95

Query: 120 NARINELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRA 179
             +I E++K+LP K+ F LVGFYSATAF+T IGQTGDWDVLSA LAV++VE IGALMYRA
Sbjct: 96  LVKIQEIKKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRA 155

Query: 180 SLPLLNKIKGLITMFNYWKAGLSM 199
           S+PL+NK++  ITMFNYWK GL++
Sbjct: 156 SIPLINKMRSTITMFNYWKTGLAL 179

[Close]

BLAST of Spg023771 vs. TAIR 10
Match: AT3G56830.3 (Protein of unknown function (DUF565) )

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 79/144 (54.86%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 60  CCSFYVTKPSVLKNFKKMA-LSIRSSVEGSPFDPPSNSSNGRT----RLIRIIQAIQTKL 119
           C   +  +P ++++ ++M+  +I+SSV G  FDP S SS+  +    RLI+ IQ +++KL
Sbjct: 36  CHFLHPAQPLLVRHQRRMSWTTIKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKL 95

Query: 120 NARINELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYRA 179
             +I E++K+LP K+ F LVGFYSATAF+T IGQTGDWDVLSA LAV++VE IGALMYRA
Sbjct: 96  LVKIQEIKKDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRA 155

Query: 180 SLPLLNKIKGLITMFNYWKAGLSM 199
           S+PL+NK++  ITMFNYWK GL++
Sbjct: 156 SIPLINKMRSTITMFNYWKTGLAL 179

[Close]

BLAST of Spg023771 vs. TAIR 10
Match: AT1G65420.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-20
Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 62  SFYVTKPSVLKNFKKMALSIRSSVEGSPFDPPSNSSN----GRTRLIRIIQAIQTKLNAR 121
           SF + +P+    F   AL   SS+ G   +    + +    G TRL RI  A   +L  +
Sbjct: 47  SFQIRRPNRKIAF---ALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIAIAGGKQLLGK 106

Query: 122 INELRKNLPLKILFFLVGFYSATAFATVIGQTGDWDVLSAALAVVIVEGIGALMYR--AS 181
           IN  RKN P+KI   L+GFY+A A AT++GQTGDWDVL A + V  +EGIG LMY+  +S
Sbjct: 107 INSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSS 166

Query: 182 LPLLNKIKGLITMFNYWKAGLSM 199
                K++  +   N+WKAG+ +
Sbjct: 167 SMFSGKLQSFVVFMNFWKAGVCL 186

The following BLAST results are available for this feature:

BLAST of Spg023771 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574801.1	4.9e-93	92.42	Syntaxin-61, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038875295.1	7.3e-89	89.80	uncharacterized protein LOC120067784 isoform X1 [Benincasa hispida]	[more]
XP_022959269.1	1.3e-88	92.59	uncharacterized protein LOC111460299 [Cucurbita moschata]	[more]
XP_004145006.1	6.2e-88	89.95	ycf20-like protein [Cucumis sativus]	[more]
KGN46257.2	6.2e-88	89.95	hypothetical protein Csa_004976 [Cucumis sativus]	[more]

BLAST of Spg023771 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80813	2.2e-19	40.56	Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2	[more]
Q9MUL5	2.7e-09	47.22	Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1	[more]
Q1XDS2	1.2e-04	29.59	Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1	[more]
P51214	3.4e-04	32.18	Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1	[more]
P72983	5.8e-04	32.91	Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]

BLAST of Spg023771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7K4	6.1e-89	92.59	uncharacterized protein LOC111460299 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A0A0K9U0	3.0e-88	89.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077990 PE=3 SV=1	[more]
A0A6J1L1A0	1.5e-87	91.53	uncharacterized protein LOC111498957 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3CBS0	1.4e-82	87.30	ycf20-like protein OS=Cucumis melo OX=3656 GN=LOC103499014 PE=3 SV=1	[more]
A0A6J1DQ25	6.1e-81	86.77	ycf20-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022766 PE=...	[more]

BLAST of Spg023771 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56830.1	1.4e-37	54.86	Protein of unknown function (DUF565)	[more]
AT3G56830.2	1.4e-37	54.86	Protein of unknown function (DUF565)	[more]
AT3G56830.3	1.4e-37	54.86	Protein of unknown function (DUF565)	[more]
AT1G65420.1	1.6e-20	40.56	Protein of unknown function (DUF565)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007572	Uncharacterised protein family Ycf20	PFAM	PF04483	DUF565	coord: 148..196 e-value: 2.7E-11 score: 43.7
IPR007572	Uncharacterised protein family Ycf20	PANTHER	PTHR33787	FAMILY NOT NAMED	coord: 11..198
None	No IPR available	PANTHER	PTHR33787:SF3	YCF20-LIKE PROTEIN	coord: 11..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023771.1	Spg023771.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005516	calmodulin binding