Spg023728 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023728
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpeptide chain release factor PrfB2, chloroplastic
Locationscaffold13: 9659444 .. 9669296 (+)
RNA-Seq ExpressionSpg023728
SyntenySpg023728
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAGGCCGAGGCCGATCATTCAGCAGGCCGAGCCCGTTCGCTTCCGTTCGGTCCCTGCTGCCTCTAGCCTCCCCGGTTCTGCCTGGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGGTATTTAAACCCCTCTTCGCCATTGAAGAAGAGATCCCGAACTCTATTCTCGACTTCTCCTCTTGCTCTCTAGCTCTTCCTTCCGTTTTCTGACTTAAGCATCGGAGGCAGTGTGGCAAGCACCACACCTGTTTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCCTCTCAAACTAATTTACCGTTGGTGGCATGTGAAGGTCAGGTGAGTTCTACCCAACCAAATTTGACCATCAACTGTAGAGTGGAGATTTGATGATTTGATCTATAAATATAAAATTGTGAATGATGAATGAATTGTCTATTTGAGCATGACTCAATGAATAGAACTCCAAATTACAATTTAAAAGGTCATGATTCAATCCTCCACCCCGCAATTATTTAGGTCCCGTTTGATAACCATTTAGTTTTTGAAAATTATGCTTCCTTTCTTCCAAATTTCCTACAATGGTTTCCATATTTGTTAAGGATCCACTTGAATTCTTAGTCAAATTCTAAAAACAAAAACTAGTTTTTGAAAACTATTTTTTTTTCAAAATTTGACATGGTTTTTAAAGACAAGGAAGAAGGTAGATGCTAAAACAAAGAAACTTATAGATGGAAGTAGGTGTATATAGGCTTAATTTTCAAAAACCAAAAACCAAAAACCAAAAATCAAATGGTTATTAAACGGAGCCTTAACTAACAAAATAAATAAATAAATAATGAATGAAGTCAACCCATATTTGATTGGTAAGAAAGGGAAAAGTCAAGCTTATTGTATTGAGAGAAGACTAAGCAAAGTCTCCTAAAGTTGGAAGAAGTGGTTGCCCACTAAAATTAAATATATATAATGAAGGTGGACTTCATAATGTAGTAAAATTCAAGGCAATTATGTCACTAAATGACGTCATTTCTATTTATTTATTTATTTATGTATTGTTTTTAAAGTTTTTTTTTTTTTTTGAGGAAATGTTTTTAAAGTGTTGGTAGGCCACAAATTCACAATTATAAATGGAATTGGCCTTCTTCTTTTGTTCTTTTCTCTCCTTCTTTTCCACCTTCCTTCGTAAAAGTCAAGAAATTAGTTCATTAAGATAGGTAAGGAGTCTTTTTTTTCTTTTTAAATATTAGAGCTAAAAAGAAAACTATAGATTATTTATTTTGTCATTACCACTTTAGTCCCTAAACTTTTATGATTCGCGTCTTATGATTTGGTGAATTTTAAAAAGTATATAATTGATCTTTTGAACTTTTAAGTTCATGTCTAATGTTCGTGGAATTGAGTGTTTGATAATTTTTTACACTTTTAATTTTATATTTATAGACGATTCCTAATTTGTTAGACATTTTTAAAAATTCATATGCCTATTAGACACAAAATTGAAAAGTCAAATTCTTATTAGACAATAGACACAAAGTTTTTTTGTTATTTTTGTGTGTCTTGGTTCATGAATTTCTAAAAAAAAAAAAAATGTTAGGTAGGTTAGAAACCTATGAATACAAAATTGAAAGTTCAATGACTTATTAAACACTTTTAAGTTTAGTGACTTAGGTGTGTTTGGTTTAACTTTTCAAGTGTTTAATTTTTTTAAAAAAAAAACATTTTGAAAAAATTTCTAGTGTTTGACAACCACTAAAAATGACTTATTAGAAAAGTGAGATTGAGAAATAAACTATTTTATATAAAATGTTTTTTAAAAAATGCATTCTTGAAAAACATTTAAGGCAAAATGTTTTCCAAACGGACCCTTATTAGACACAAAATCGAAAGTTTAGGCCTAATTTAATAACTATTTGGTTTTTGAAAATTATGGTTATTTTCTTACCATTTCTTTGTCATGGTTTTTATCTTTCTTAAGAAAACATTTGAATTCTTAACCAAATTTTAAAAATAAAAACAAGTTCTTAAAAATGATTTTCTTTTAGTTTCCAAAACTTGGTTTGAATTGAAAACGTTTGTGAAAAATAGATAACAAAAAAAAAAAAAAAAAAAAAAAAAACTCATAAGTGTTTATAAGTTTAATTTTCAAAAACCAAAAACCAAAAATCAAATGGTCATCGAACGAGACTTTAAATATTTATTAGACAATTTTAAGAGTTCAGAATTTAGATATAACATTCAAAGTTCAAATACCAAAATTATAATTTAATCTTCCTTTTATACTATATATATTTTGAGTTTTCCTTTTTTTTTTTGAAAATATTTTGAGTTTAACAATTATGGGATGAAGAATCGAATATGGACCAAATTATATTCGAATCGAGAAAAATTAAAATTTTTAAGAGTTAGGTCGGTGCGAATGGTTAGGCCATAAAATAAATACTTAAGAAGACCCGAGTTAAAAATTTGAGGTCATTAGAATTGCATAAATTATTTATTAAATAAATATTATGAGATAGTGATTTTTTTTTTTTTGTTCTTGTTTAATAATTGTTTTTCCCTCAACAGGGATCACAACAAGGCAATTAGGCACTTTGTTGGGCATTTTTATTTTAATCCACTGCCTTGTCTTTTTCCTCAAATTCACGACATCAACATAGGTTTGCATAATTTTATATGGGCCACATATCTCTAAATAAAAGTTGATATACTTCTCGGAAAAAAAAAAAGAAAGAAAAAAAAAGAAGTTGATATATATATATATATATATATATATAGGCAAAGATAGAAATTCTATTTTTGCTAAAGACTAATTCACAATTATTGGCATTGTAGCCGCCTTTTGAATATAGCCGTGCACTGTGTTGCGAAGAGAGTTGCGAACCTTCCCCTTCCATGCGCGAGTTCTTCGTCTTCTGGGTTCGGTAGCAGGATCTCCCCTTCGCGGGAAACAGGGTATGTATTTTGGGCTCCTAATATTCCTTCTTGGCTTTTTCCCCTTATTTATGAGGGAAGTTGTAACGATGTTTTTTAGTTTTAATATTATTCCTGATTCAAAAAAAAAAATCACAATTATCTCTTGAGAGATAACATTTTCTTCTATGATTAATAGAATATAATACTAATCATTGTAGGTGGTGATCCAATTACAGATGAAACTTTTAAGAGATTGTAATTTTTTCAAATTGACTTTTGGTCTATTTGGAATACATTTTAGGTCGAGTGTTTTTCAACAATACTTTTCTTTTAACCAGTTGAGTTATGTTCTTGTTGACTTATAACAAAATACTTAGTGTGTTCTAAAACTACACATCTGGTAAAACAATTATTAATAAGCTTAATAGTTAAGTTAATTTGTGACATAGTTTTCCATGAATTTGAAAGATGAGATTATGAGATGAGAGTAAAAAGAAGAAAACATATGGGAGAGATGAGGGTTAGATAGTCTTAGGTGAACAATGTTAAGGAGATTGCTAAACCATGTCAGATTAATGAAGATAATCAGTTCAATTAAGTTTGGTTCTAGAAGCTTCTCTCCAACGATTTTTGTTACCAATATTCCTTCCAATGATTGGTTTCTCCGGTAATAATAGGACATCTGTCCTTTATTGTATTTATCATTATTTCATTATTTGATTGCTCTAAAGAGAATTGATGTATAAATATGGTTGTAGCCATTGCTAATATTCATTCAATACAGAAAGCAGAATTACCTCTCCATTTTCTACTCTGTTTAAAAGTTTAACTTGGTATCAGAGCCAAAATGGCCAACGCCTCGACGAATAGTGGAGTATCCTTGGGAATAAGTAGCCCAACTTCGTTCAGCTCACCGCCCCTCAATCAATTGTTGAATCAAATCACAACAATTAAGTTGGATCGAGGTAATTTCTTGCTGTGGAAAAATCTTGCCCTTCCGATTTTACGAAGTTACAAGTTAGAAGCCACTTGCTTGGAACCAAACCATGTCCACCGATGTTTTTCACTCAGACTGCTGAAGGTACTAATAATGGTGCTACGGGAACAACGAATATTGCTGAGGCATCAAGCTCAGAGGCACCTGGAAGTGGAGCATTAAGCTCAACACCTGCCGAGGTCATAAATCCATTATATGAAGCATGGGTTACTACAGATCAATTATTATTAGGATGGCTTCAAAATTCGATGACCTCAGAGGTCGCTACTCAAGTAATGGGTTTCTATAACGCCAAGGATCTCTAGGTAGCAGTTCAAAATCTTTTCGGATACAATCGAGAGCTGAAGAGGACTATCTTAGACAAATGTTTCAACAAACACGAAAAGGTACGTCTAAAATGGTTGATTATCTCAGACTAATGAAAACCCATGCTGATAATTTAGGGCAAGCTAGAAGTCCTGTTTCATCGAGAAATCTGATCTCTCAAGTCCTACTGGGGCTAGACGAAGAATATAATCCTGTTGTTGCAATGATCCACGAGAGAGGAGATATAACCTGGTCGGAAATGCAAGTCGAACTCCTAGTCTTTGAGAAGCAGCTGGAACTTCAAACAGCTCAGAAATCTATAGTTTCTTTCAGCCAAAGTGTGTCTGTCAATTTAGCTAATACCAAGGGGATACCTAATGCGAACAACAATACAAATAGAGGATGGAACTTCAACAATAATCAAAGAGGTCAGAACTCTAACAGTGGTCAGAAGGGTGGATCACAGTTCAACAACAATAGAGGTCGTGGAGGCCGAGGCAGAGGCTACTCCAATTGTGGCAATTATGACAATAACAACAATCGACCGGTATGTCAAGTTTGTGGTAAACCAAGTCATTCAGCTATTGTTTGTTATCATATGTTTGATAAGGAATTTACACCTAATCAGAATAGAAATGGTAGTTCCAATACCACTGTTATTCAATCAAATACTGGTCATTATGCTGGAAATTCATCACGTGCTACAGCTTTTTTGTAGCCAATTCAGGAAACCCGTTTTTAGCTAATCCTGAAACAGTGATCGACTCCAACTGGTATGCCGACAGTGGAACGTCAAATCATGTGACTGGCGATTACAATAATCTGGTTAATCCTAAAGAATATGGAGGTAATGAGCAAGTCATTATTGGTAATGGTACTAAATTACCAATTTCCTTTACTGGCAGTACATATTTGACTGATGGATCATGTGTTCTTAGCCTTGATAATATTTTGTTAGTGCCAAATATAGCCAAGAATTTAATTAGTGTGTCAAAGTTGGCACAAGACAATAATGTTTATGTTGAATTTCATGGCAATTTTTGTCTTATAAAGGACAAGGCTTCGGATCGGGTTCTGCTGAAAGGAATACTTAGAGACGGCTTGTATCAGCTTGAAAGTGTTCATCCATTGTCTGCAAATGATCCAAATCTACCTGCTCCAGTTTCACAGATAATTCTAGTCCATCAGTCTGTGTTGCTTCTTGTCAATCTGTTCATGTCTTTACTGCTGTTTCGAAAAATGTTTGGCATAGACGCCTTGGTCATCCAGTGCCCAAGGTTCTTGATTTTGTTATTAAAGATTGTAATCTCCCAGTTAAAGGAAATGAAAAAATTGAGTTTTGTGCTTCCTGTCAATTTGGTAAAGCTCATAATCTGCCTTTTCAGTTGTCTAACACTCGTGCAAAGCATCCTTTTGATTTGGTTCACTCAGACTTGTGGGGTCCTGCATCCGTAGAATCTCCTGATGGTTTCAAGTTTTATGTGTTGTTTTTGGATGATCACAACAGGTTTACATGGTTGTATCCTCTCAAACGGAAAAGTGATACTTTTCATGCCTTCCAACACTTTGCTCAGCTGGTTAAAAGACAATTTAACATATGTATCAAAGTTCTTCAGTCTGATAATGGGGGTGAATTTGTCCATATCCATCGGGAGTGTTACAAATTGGGGATTATCTCTCGGTACTCTTGTCCTTATACCTTAGCTCAAAATGGGAGGGCTGAGAGGAAGCACAGACATATCATCGAAACTGGTCTCACTCTTCTTGCTCAAGCCTCCATGCCGCTTATTTATTGGTGGGATGCGTTCCTTGCGGCTGTACAGTTGATAAATGGACTTCCATCTCCTGTTCTCCATGGTAAGTCCCCAATTGAGCTTTTGTTTCATAAGAGGCTTGATTTTTCTTCTTTACGTGTTTTTGGCAGCGTCTGCTATCCATGTCTTAGATCATATCAAAGCCACAAGTTCATGTTTCACTCTGAACGGTGTGTATATCTTGGCTTCAGTCCTGCTCATAAAGGCCACAAGTGCCTGAATGCCTCCGAGAGAATCTATATATCAAGAAATGTTCGGTTTAATGAGAATGACTTTCCATTCTCAACTGGTTTTGCCTCATCATCTGTCCCAAATACTACAACTAAGACTTGTCCACCTATTACACACTGTTTTCCAGCTCCTGTCATGTCCTTTCAGCCTCAACAACATACTTTACCTTCACCTATACAGTCTACACCTTTGCCTCAGATTGTGCACCAGCCTGTTCCACCTAACCCATCTACATCAGTCCAGCCTAATACTCTACCTCAGTCCTCTCAACAACCTTTGCAGTCGTCTGTTGCCTCACCCATTTTTCAGAATTTAACACCATCCTCGCAACCATGTAGCCCAACAGCAGCCTTTGAGAATCTCAACAACTTGTCCAGTCCCCAACCATCACATCCTACATCACCTATACTGCCCCAACCTCCTGTCCCACCTAATCCTACCAACTGTCCTACTCAGCCATCTCATCCAATGACTACTCGTGCCAAATCAGGCATATTCAAACCAAAAGCCTGGCTTACAAAGGCAATTACTGACCGGTCTCTCACTGAGCCAACCCGAGTGAAGGATGCTATTGCTACCCCTCAATGAAAACAAGCTATGGATCTTGAATATTCTGCCCTGATATCGAACAAAACATGGTGTTTGGTGCCTCCCTCGCCTGATATGAATGTCGTTGGTAACAAATGGGTGTTCCGAATTAAAAGAAATGCGATTCAACGCTATAAAGCTCGTTTAGTGGCGAAGGGATTTCATCAAAGCCCTGGGATAGACTTCTTCGAAACCTTCAGCCCTGTTGTTAAGGCATCAACTATTCGTGTGGTGCTTAGTCTTGCTGTCTCGAGAGGCTGGTCGATGAGGCAACTTGATTTTAATAACGCCTTCCTTAAATGATCATTGGATGAAAAGGTATTTATGTGTCAACCTCTTGGCTATATTGATCCTGCATTTCCCACCTATGTTTGCAAATTGAACAAGGATATATATGGCTTGAAACAAGCTCCTCGGGTGTGGACAAATACACTCAAATTTGCTCTTTTGTCTTGGGGTTTCCAGAATTCCAGGTCTGATACTTCCCTTTACTTTTATAAGCATGACAGGGATATTATTATACTCTTAGTCTATGTTGATGATGTTGTTATAACAGGGAGCAGTGACTCTTTAATTAACCAATTGGTAAAGAGTTTAGACAGTCGGTTTTCTTTAAAAGATTTGGGGTTGTTAAGTTACTTTTTGGGCATTCAAGTCAATTACTTACCTTCTGGTATTCTACTGACTCAAGAAAAGTATATTAATGATTTGTTACACAAGTTGGTATTCTCCCTGTGTTGTGGGTAAGCATTTGTCATTACATGAGGGAGAACCTCTTGCTGATCCGTTTGTGTATATAAGCACCATTGGTGCTCTTCAATATCTCACAACCGCCCGACCGGACATAGCCTATATAGTTAACCACCTCAGTCAGTTTCTCAAATCTCCAAGTGACATACACTAGCATGCTGTTAAAAGGGTTCTACGATATATCAGTGGCACAAAACACCTTGGTTTGCATCTTAACTCTGGCTCGAATATATGCATATCTGCCTTCTCGGATGCTGACTGGGCATCCAACATTGATGATCGCAAGTCTATTGCAGCCTACTGCGTGTTCCTTGGCGAAAACTTGGTGTCTTGGTCGTCAAAGAAGCAAACCGCTATTGCTCGCTCGAGCACAGAATCAGAATACCGAGCTTTGGCTCATGCCACAGTTGAAATTATGTGGCTTCAACAACTGTTGACTGAGATTGGTTGTTCCTCTTCTTCTAAACCAGTGTTATGGTGTGATAATTTATATGCAGGTGCTCTTGCTGTCAACCCCGTGTTTCATGCCCGCACTAAACATATCGAGATTGATGTTCATTTTGTTCGGGATCAAGTTCTCAAAGGATATTTAGACATTCGTTATGTCCCAACTTCGGATTAGCTCGCAGACTGCTTGACTAAGTCTCTCTCTCACTCTCCCTTCTCCTACTTACGCTCCAAACTCGGCATAGTAGAACTACCCACTCGTTTGAGGGGGAATGTTAAGGAGAATGCTAAACCATGTCAGATTAGTGAAGATAATCAGCTCAATTAAGTTTGGTTCCAGAAGCTTCTCTCTAACGATTTCTGTTATCAATATTCCTTTTAATGATTGGTTTCTCCTATAATAATAGGACATTTGTCCTTTATTGTATTTATCATTATTTCATTATTTGATTGCTCTAAAGAGAGCTGATGTATAAATATGGTCGTAGCCAATTGTTGATATTCATTCAATACAGAAAGCAGAATTACCTCTCCATTTTCTACTCTGTTTAAAAGTTTAACTAACAATACATAGAGTTTTCTATTATTTTCTGAAAAAAAAAAAAAAATTGCCACTAAAGCTGAAGATTGTTTTAGGAATGAGTATAAATAACTTAGGCCCCGTTTGATAACTAATTGGTTTTTGGTTTTTGAAAATTAAGCTTGTTTTCTCCCAAATTTCTTACCATTGTTTTCATTATTGTCAATGACACATTTGAATTCCTAGCCAAATTCCAAAAACAAAAACAAGTTTTTGGAAACTACTTTTTTTAGTTTTCAAAACTTGAGTTGGTTTTTGAAAACATGGGAAGATGGTAGAGAACAAAACAAAGAAACTTAGTAGTGGAAGTAATGTTTATAGGCTTAATTTTCAAAAACCAAAAATTAAAAACAAAATGGTTATCAAACGGGGCCTTAATTTTTTATTAAAAAAATTACTAATACATTAGTCAATTAGTTTAGGTTGATGTTTGTAAAAGTTTAAAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGTTTAGGTTTCGTTTTGGTCCCTGAGGTTTCAAACTCAACATTTTAGTCCCTGAGGTTTGCATTTAGTAGCATTTTAGTCCCTCCATCCAATTTTCTGTTAGATTTTAACAGATCTCTGACGTGGCATCCATTTTTTTTATTAAAAAAATATTTTTTCATTTGTTAAAATAAAAATAATAAAATATTAATTTTAAATATATTTTTATTTTTATTTTTAATTTTTTTTCTTTCTTCTTCTTCAACCCCTTCACCACCCACCCTCCTTATTCTTCTTCAACCTTCCTCACAGCTCACACCACCAATAGCCGCCGGGGACAACTTTTTTTTTCTTATGTTTTTTCTTCTTCCCCCTCCTCTCTTTTTCTTCCAACGAGCTACGGAGAGAGATAGATCTACCAGATCTGGTGACGACGGAGAGAGAGACGCTGGACACGGAGAGAGAGACAGCTGGAGATGGAGACGACGCCAGATCTAGGCTCGTTCCAGTCCGTTCGTGCTCCTCCCGCCGCCATCGCTGTCATAGCGAAGCTAATTCCACCGGAGCGACATGAGAGGGAGAGACGGTAAGATCTGGATGGCGGGCGTGCTCCTCACACAGGTGGCGATTGAGCCTTCAACAGCCGATGGGCTTACAGTCGAAGGAATAATTGGAAATCGATGGAGGATTCTTGATGAGAGCAAGAGCGATTGGAGGAGCCATGCTGCTACAAATGCCCAATCCATTCATCTGATCAAGTAG

mRNA sequence

ATGCCAAGGCCGAGGCCGATCATTCAGCAGGCCGAGCCCGTTCGCTTCCGTTCGGTCCCTGCTGCCTCTAGCCTCCCCGGTTCTGCCTGGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCAGTGTGGCAAGCACCACACCTGTTTGCAGCCGCCTTTTGAATATAGCCGTGCACTGTGTTGCGAAGAGAGTTGCGAACCTTCCCCTTCCATGCGCGAGTTCTTCGTCTTCTGGGTTCGGTAGCAGGATCTCCCCTTCGCGGGAAACAGGAGCCAAAATGGCCAACGCCTCGACGAATAGTGGAGTATCCTTGGGAATAAGTAGCCCAACTTCGTTCAGCTCACCGCCCCTCAATCAATTGTTGAATCAAATCACAACAATTAAGTTGGATCGAGGGCAAGCTAGAAGTCCTGTTTCATCGAGAAATCTGATCTCTCAAGTCCTACTGGGGCTAGACGAAGAATATAATCCTGTTGTTGCAATGATCCACGAGAGAGGAGATATAACCTGGTCGGAAATGCAAGTCGAACTCCTAGTCTTTGAGAAGCAGCTGGAACTTCAAACAGCTCAGAAATCTATAGTTTCTTTCAGCCAAAGTGTGTCTGTCAATTTAGCTAATACCAAGGGGATACCTAATGCGAACAACAATACAAATAGAGGATGGAACTTCAACAATAATCAAAGAGGTCAGAACTCTAACAGTGGTCAGAAGGGTGGATCACAGTTCAACAACAATAGAGGTCGTGGAGGCCGAGGCAGAGGCTACTCCAATTGTGGCAATTATGACAATAACAACAATCGACCGGTGGCGATTGAGCCTTCAACAGCCGATGGGCTTACAGTCGAAGGAATAATTGGAAATCGATGGAGGATTCTTGATGAGAGCAAGAGCGATTGGAGGAGCCATGCTGCTACAAATGCCCAATCCATTCATCTGATCAAGTAG

Coding sequence (CDS)

ATGCCAAGGCCGAGGCCGATCATTCAGCAGGCCGAGCCCGTTCGCTTCCGTTCGGTCCCTGCTGCCTCTAGCCTCCCCGGTTCTGCCTGGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCAGTGTGGCAAGCACCACACCTGTTTGCAGCCGCCTTTTGAATATAGCCGTGCACTGTGTTGCGAAGAGAGTTGCGAACCTTCCCCTTCCATGCGCGAGTTCTTCGTCTTCTGGGTTCGGTAGCAGGATCTCCCCTTCGCGGGAAACAGGAGCCAAAATGGCCAACGCCTCGACGAATAGTGGAGTATCCTTGGGAATAAGTAGCCCAACTTCGTTCAGCTCACCGCCCCTCAATCAATTGTTGAATCAAATCACAACAATTAAGTTGGATCGAGGGCAAGCTAGAAGTCCTGTTTCATCGAGAAATCTGATCTCTCAAGTCCTACTGGGGCTAGACGAAGAATATAATCCTGTTGTTGCAATGATCCACGAGAGAGGAGATATAACCTGGTCGGAAATGCAAGTCGAACTCCTAGTCTTTGAGAAGCAGCTGGAACTTCAAACAGCTCAGAAATCTATAGTTTCTTTCAGCCAAAGTGTGTCTGTCAATTTAGCTAATACCAAGGGGATACCTAATGCGAACAACAATACAAATAGAGGATGGAACTTCAACAATAATCAAAGAGGTCAGAACTCTAACAGTGGTCAGAAGGGTGGATCACAGTTCAACAACAATAGAGGTCGTGGAGGCCGAGGCAGAGGCTACTCCAATTGTGGCAATTATGACAATAACAACAATCGACCGGTGGCGATTGAGCCTTCAACAGCCGATGGGCTTACAGTCGAAGGAATAATTGGAAATCGATGGAGGATTCTTGATGAGAGCAAGAGCGATTGGAGGAGCCATGCTGCTACAAATGCCCAATCCATTCATCTGATCAAGTAG

Protein sequence

MPRPRPIIQQAEPVRFRSVPAASSLPGSAWFVPKRLRIPKNPRSMSSIGGSVASTTPVCSRLLNIAVHCVAKRVANLPLPCASSSSSGFGSRISPSRETGAKMANASTNSGVSLGISSPTSFSSPPLNQLLNQITTIKLDRGQARSPVSSRNLISQVLLGLDEEYNPVVAMIHERGDITWSEMQVELLVFEKQLELQTAQKSIVSFSQSVSVNLANTKGIPNANNNTNRGWNFNNNQRGQNSNSGQKGGSQFNNNRGRGGRGRGYSNCGNYDNNNNRPVAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAATNAQSIHLIK
Homology
[Close]
BLAST of Spg023728 vs. NCBI nr
Match: XP_038878326.1 (peptide chain release factor PrfB2, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-13
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 279 VAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAATNAQSIHLIK 325
           VA+EPST+DGLTVEGI+GNRW ILDES+SDWRSHAA  AQSIHLIK
Sbjct: 70  VAVEPSTSDGLTVEGILGNRWTILDESESDWRSHAAAIAQSIHLIK 115

[Close]
BLAST of Spg023728 vs. NCBI nr
Match: XP_038878322.1 (peptide chain release factor PrfB2, chloroplastic isoform X1 [Benincasa hispida] >XP_038878323.1 peptide chain release factor PrfB2, chloroplastic isoform X1 [Benincasa hispida] >XP_038878325.1 peptide chain release factor PrfB2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-13
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 279 VAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAATNAQSIHLIK 325
           VA+EPST+DGLTVEGI+GNRW ILDES+SDWRSHAA  AQSIHLIK
Sbjct: 70  VAVEPSTSDGLTVEGILGNRWTILDESESDWRSHAAAIAQSIHLIK 115

[Close]
BLAST of Spg023728 vs. NCBI nr
Match: XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida])

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-13
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 0 

Query: 143 QARSPVSSRNLISQVLLGLDEEYNPVVAMIHERGDITWSEMQVELLVFEKQLELQTAQKS 202
           QA SP+  R L+SQVLLGLDEEYN +VAMI  R D++W +MQ ELL++E++LE Q+ QK+
Sbjct: 130 QAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERRLEHQSNQKT 189

Query: 203 IVSFSQ--SVSVNLANTKGIPNANNNTNRGWNFNNNQRGQNSNSGQKGGSQFNNNRGRGG 262
            V F+Q  + SVN+ NT+ + N NN T        N   Q+   GQ+GG      RGRG 
Sbjct: 190 TVGFNQISNASVNMTNTRHV-NQNNKT--------NSSNQSIGGGQRGGGGHGRGRGRG- 246

Query: 263 RGRGYSNCGNYDNNNNRPV 280
                        NN +PV
Sbjct: 250 ------------RNNKKPV 246

[Close]
BLAST of Spg023728 vs. NCBI nr
Match: XP_016900916.1 (PREDICTED: peptide chain release factor PrfB2, chloroplastic [Cucumis melo] >XP_016900917.1 PREDICTED: peptide chain release factor PrfB2, chloroplastic [Cucumis melo] >KAA0050946.1 peptide chain release factor PrfB2 [Cucumis melo var. makuwa] >TYK10293.1 peptide chain release factor PrfB2 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-13
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 279 VAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAATNAQSIHLIK 325
           +A+EPST+DGLTVEGI+GNRW ILDES+SDWRSHAA  AQSIHLIK
Sbjct: 70  IALEPSTSDGLTVEGILGNRWTILDESESDWRSHAAAIAQSIHLIK 115

[Close]
BLAST of Spg023728 vs. NCBI nr
Match: XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida])

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-13
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 0 

Query: 143 QARSPVSSRNLISQVLLGLDEEYNPVVAMIHERGDITWSEMQVELLVFEKQLELQTAQKS 202
           QA SP+  R L+SQVLLGLDEEYN +VAMI  R D++W +MQ ELL++E++LE Q+ QK+
Sbjct: 130 QAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERRLEHQSNQKT 189

Query: 203 IVSFSQ--SVSVNLANTKGIPNANNNTNRGWNFNNNQRGQNSNSGQKGGSQFNNNRGRGG 262
            V F+Q  + SVN+ NT+ + N NN T        N   Q+   GQ+GG      RGRG 
Sbjct: 190 TVGFNQISNASVNMTNTRHV-NQNNKT--------NSSNQSIGGGQRGGGGHGRGRGRG- 246

Query: 263 RGRGYSNCGNYDNNNNRPV 280
                        NN +PV
Sbjct: 250 ------------RNNKKPV 246

[Close]
BLAST of Spg023728 vs. ExPASy Swiss-Prot
Match: F4I532 (Peptide chain release factor PrfB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRFB2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.7e-06
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 250 SQFNNNRGR----GGRGRGYSNCGNYDNNNNRPVAIE----PSTADGLTVEGIIGNRWRI 309
           S F  N G+      R   Y+  G+   ++ R ++ E     +T DGLTVE II N+W I
Sbjct: 48  SYFGFNYGKISNLNQRFGNYAYSGSSFASSTRSLSSEAVAVAATCDGLTVERIIANQWPI 107

Query: 310 LDESKSDWRSHAATNAQSIHLIK 325
           LDE++ DW+SHAA  AQSI +IK
Sbjct: 108 LDENEGDWKSHAAAIAQSIQVIK 130

[Close]
BLAST of Spg023728 vs. ExPASy TrEMBL
Match: A0A1S4DY60 (peptide chain release factor PrfB2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492513 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.4e-13
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 279 VAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAATNAQSIHLIK 325
           +A+EPST+DGLTVEGI+GNRW ILDES+SDWRSHAA  AQSIHLIK
Sbjct: 70  IALEPSTSDGLTVEGILGNRWTILDESESDWRSHAAAIAQSIHLIK 115

[Close]
BLAST of Spg023728 vs. ExPASy TrEMBL
Match: A0A5D3CEK4 (Peptide chain release factor PrfB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004440 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.4e-13
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 279 VAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAATNAQSIHLIK 325
           +A+EPST+DGLTVEGI+GNRW ILDES+SDWRSHAA  AQSIHLIK
Sbjct: 70  IALEPSTSDGLTVEGILGNRWTILDESESDWRSHAAAIAQSIHLIK 115

[Close]
BLAST of Spg023728 vs. ExPASy TrEMBL
Match: A0A6J1JP75 (peptide chain release factor PrfB2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486461 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 46/70 (65.71%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 267 NCGNYDNNN------------NRPVAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAA 325
           NCG  D  N            +  VAIEPSTADGLTVEGIIGNRW IL+ES+SDWRSHAA
Sbjct: 51  NCGVSDFKNISGFPFSTLRLFSTQVAIEPSTADGLTVEGIIGNRWTILEESESDWRSHAA 110

[Close]
BLAST of Spg023728 vs. ExPASy TrEMBL
Match: A0A6J1EUC0 (peptide chain release factor PrfB2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437810 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-13
Identity = 46/70 (65.71%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 267 NCGNYDNNN------------NRPVAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAA 325
           NCG  D  N            +  VAIEPSTADGLTVEGIIGNRW IL+ES+SDWRSHAA
Sbjct: 51  NCGVSDFKNISGFPFSTLRLFSTQVAIEPSTADGLTVEGIIGNRWTILEESESDWRSHAA 110

[Close]
BLAST of Spg023728 vs. ExPASy TrEMBL
Match: A0A6J1DZU3 (peptide chain release factor PrfB2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026124 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 9.9e-13
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = 0 

Query: 266 SNCGNYDNNNNRP----------VAIEPSTADGLTVEGIIGNRWRILDESKSDWRSHAAT 325
           S C N+   +  P          VA+EPST+DGLTV+GIIGNRW ILDES+SDWRSHAA 
Sbjct: 99  SGCANFKKISGFPFCSPRLFSTQVAVEPSTSDGLTVDGIIGNRWTILDESESDWRSHAAA 158

[Close]
BLAST of Spg023728 vs. TAIR 10
Match: AT1G56350.1 (Peptide chain release factor 2 )

HSP 1 Score: 52.8 bits (125), Expect = 6.2e-07
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 250 SQFNNNRGR----GGRGRGYSNCGNYDNNNNRPVAIE----PSTADGLTVEGIIGNRWRI 309
           S F  N G+      R   Y+  G+   ++ R ++ E     +T DGLTVE II N+W I
Sbjct: 48  SYFGFNYGKISNLNQRFGNYAYSGSSFASSTRSLSSEAVAVAATCDGLTVERIIANQWPI 107

Query: 310 LDESKSDWRSHAATNAQSIHLIK 325
           LDE++ DW+SHAA  AQSI +IK
Sbjct: 108 LDENEGDWKSHAAAIAQSIQVIK 130

The following BLAST results are available for this feature:
BLAST of Spg023728 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038878326.14.1e-1384.78peptide chain release factor PrfB2, chloroplastic isoform X2 [Benincasa hispida][more]
XP_038878322.14.1e-1384.78peptide chain release factor PrfB2, chloroplastic isoform X1 [Benincasa hispida]... [more]
XP_038905164.17.0e-1344.60uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida][more]
XP_016900916.17.0e-1382.61PREDICTED: peptide chain release factor PrfB2, chloroplastic [Cucumis melo] >XP_... [more]
XP_038905161.17.0e-1344.60uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida][more]
BLAST of Spg023728 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4I5328.7e-0643.37Peptide chain release factor PrfB2, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
BLAST of Spg023728 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DY603.4e-1382.61peptide chain release factor PrfB2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A5D3CEK43.4e-1382.61Peptide chain release factor PrfB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A6J1JP754.5e-1365.71peptide chain release factor PrfB2, chloroplastic OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1EUC04.5e-1365.71peptide chain release factor PrfB2, chloroplastic OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1DZU39.9e-1362.32peptide chain release factor PrfB2, chloroplastic isoform X1 OS=Momordica charan... [more]
BLAST of Spg023728 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G56350.16.2e-0743.37Peptide chain release factor 2 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..257

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023728.1Spg023728.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006415 translational termination
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016149 translation release factor activity, codon specific