Spg023628 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023628
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 11050452 .. 11053536 (-)
RNA-Seq Expression	Spg023628
Synteny	Spg023628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGGGACGAGAGGCGTGAGACCAACGAGTTTTTCGCCAGTTGTTGTGGAACGAAGCACCAACGTTCAAACTCCTTCATCCTCGACAATGTCGGCCACTTCAAGGGAGAATCCGAGTGGTTCTTGTCAAAGAAGATCCATGCCCACCGATTCTCTCCACAAAACCCAAAAACTTGCGAGCCAACAATTGAGAAAACGCTCGAGGGAGTGGTTTGCTATGATCTGTGAGATGGGAGCTCAAAGGCCTGCAACTCTTGAGGAGAAAGCAAGGTTGCATGATGCTGAAGAATCCGCCAAAGTGGGAGAAAGTTCTTGGGAAAGAGAGACTCCATTGGGTAACGTCTCCAAACCTTCTACTAATCCAACTTCTTCTTGTAGGGAAAGGCCCTTTGTGACTTACAGTGCAAGGAAGAAAGATTTCAAGAAGGCTGAACCCGAAAAGCCTCTGATCATTGAGCCCCTTAAAGTAGTGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTAGTTTTATAGTGTTTTGTGTGTCATTTGTGCTAAATTGGGTTGCTTTTACATGAATATTATATGTTTTAACCCATTTGAGAGAATGGATGCTTTGGAAGTTATTTTGTGCAGAATATATTGTTGAGCGACTTGAGGGAGCAAAATCTGTGATCCAGCAAAGCAAGAAGCAAAATTTCCACGTCACAGCTCGTTATCCATTTTAATGAGTTGAAGTTTGTTGAGCTATTTTCGGATTTAAGAAGCTTGGAAAGCCTGCCACGTGTCCAATTTGACCTAATTAGGGCTTGCTATCACTCTATAAAAGGAAGAGTCGTCTCAAGTCAAAAGCATTCCTTTCTTGGGAGGAACATTCCACTCTTCGAAAGTTCATTTCCACTTTTGGGAGCCGAATAGAGGAGGAAAGATTGGAGACTCAAGAAGACCATCAACTACGAGTTTCTTCGAGGGAATTTACTTTTTCTTGTAATTTCTTGTAGTTATGGATGCACATACTCAGATTGTAGCGTGTGTTATCATGAGCTTTATGAACTTAATCTACTTAGGTGTTGGTTAGGAAGTATGTAATTGTCGTGCTTACTCTCTATGCAATATATGTTGATTTGAGCATCTTGATTAATTGTTGTGCATATTTCTATTTTGTGCCCGCCTGGCTAGCCGGTATGAATACCACTTCTTAGTTTCAGGGATGATTTGAGAAGTGTGTGGCATTTAATCACACTAGATCATTGTGTATTGGTGAACACCAGTGGCTGAGTTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTAGAGCGTTGTTGGAGTTGAAACACATTCCAAAAAATCCAGAGTTCTGGGAGGATCCTGCTAATAAAACTGCAAGAGTTTTGCCTGATCAATAATATTGCTAGAGCATCTTTTAAAACAATTACTAAATCCTGACCAATGCCTATTTCTAATCTGTCTGCTTTATTTGTTTACTTTTTGTTCTGTCATTTCTTTCGCTTTAGCATTATACCAAAATCAATCATTTTAACCACTTTTGAAACCATTAAAGAGTTATACAAAATAGATAAAGTGAGAGCTATTCAGCCCCGTGGATTCGATAAATACTTATTACTTGTTGCAGATTGTGTATGCTTACACAGTGTTCTGGAGTCTATTTTTACCATATTTCTATCCACTCTGGAAACCCAACAAGTAGCTAGAATGCCACCGGATGTGTTCGAAGAGATGATCCGACAGGCGCACAAGCCCTCATTATTGCTGAAGGTTACAGGACTAAACAAGATGCACTTAGGGAAATAAGGACTGAAAAGGAAAGGGAAAATCAAAGTATGAGGGATGAAGATGAATTTGCAAGAAAAAAAGACTTGGAAGAAGAAAAGGAAGCTGAGAAAAAGAAAGAAGAAGAAAGACAAGAGGCCAAGAGGGCCATACAAGCTCAGAAAGAGAGAAAAGAAGACGAAGAACTCAGGAGGTTGGCAGATGAACTCCAACTCCTGGAGAAAGAAAAAGAAATAAGAGAAAATTTGAGAGAAAAAGAAGAAAGAAGAAAAGAGGTTGAAGATTTTCTTGCAACCTTTGAGCCACTGCATAAGGCTCAAAGTGAGGCTGAGCAACTGCAAGAGATTGAAGAAGAGGCCTTTGAAGGGCCAAGTAAAGAAAAGGCAGAAAAAGAAAAAGAAGAAGAATCTAGTGAAGGCCAGAATGCGACCACATTTGGGCCGCATTCTGAGGTAGGCCAGGAAAAGGCCACTAAAGAGAACCAAACTGATGAGGCCCTTGATCCACTGCTTGAATATGACATTAGAGGACCTCCACCAGTTGCTAATAACACCTCTTCAGGAGAGAAAAAGGATGAAGAGCAAATTGAAGAAGAAGAGGCCGAGACCTCTAGTGATACCGAAACCGAATCAGATTCTGAGATAAAGAAATTGGACGATGATCAAGTGCAAATTTCTGTAGCTTTGAGGAAGAAAAGAAGAAGAGAACTTAGGGCCAAGAGGAGGACAAAGAATAAGAATGACCCTATTTTTTCCGAGAACCGAGGACAAGGTCCATGAACGCCTCTGCTAGAGTTCCTTCTACCTCCACACCTGTCAAACCGAAAGTCAAATCGCCAAAAGCTCCATCACTAAATAATTCGTTCCCAGAAGTCTTCAAGGATGTCAATTTCCAGGAGAAGATGGAGATTATGAGAAAAAGAGACTTCTTGAACGAGAAAGGATTCTCAAACACAACAGGGACTTTGCCAGACTTTGTAACCTAGGTCATCTCACAGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCCGTAGTGCCTCTAATTCGAGAGTTCTATGCTGGTTTGAGGGAAGAGAGCATGAGCATGACAATGGTGATAGGTAAAATGGTCAGTTTTTCTTCGGTTGACATCAACAGGGTGTACCGGATCAAGGCACCCCTGCATCCAAGAGGGAATGATGCGATTAAGAACCCCTCGGCCAAACAGATAAAAGAAGCATCGAAGATGGTGGCCAACAAGGGAGTTCAGTGGAAGGAGTCTCAAACAAAGGTGAAAACATTAGTGCCCAGTGATCTCAAGCCATAA

mRNA sequence

ATGCACGGGACGAGAGGCGTGAGACCAACGAGTTTTTCGCCAGTTGTTGTGGAACGAAGCACCAACGTTCAAACTCCTTCATCCTCGACAATGTCGGCCACTTCAAGGGAGAATCCGAGTGGTTCTTGTCAAAGAAGATCCATGCCCACCGATTCTCTCCACAAAACCCAAAAACTTGCGAGCCAACAATTGAGAAAACGCTCGAGGGAGTGGTTTGCTATGATCTGTGAGATGGGAGCTCAAAGGCCTGCAACTCTTGAGGAGAAAGCAAGGTTGCATGATGCTGAAGAATCCGCCAAAGTGGGAGAAAGTTCTTGGGAAAGAGAGACTCCATTGGGTAACGTCTCCAAACCTTCTACTAATCCAACTTCTTCTTGTAGGGAAAGGCCCTTTGTGACTTACAGTGCAAGGAAGAAAGATTTCAAGAAGGCTGAACCCGAAAAGCCTCTGATCATTGAGCCCCTTAAAGTGTTGGTTAGGAAGTATGTAATTGTCGTGCTTACTCTCTATGCAATATATGTTGATTTGAGCATCTTGATTAATTGTTGTGCATATTTCTATTTTGTGCCCGCCTGGCTAGCCGGCGCACAAGCCCTCATTATTGCTGAAGGTTACAGGACTAAACAAGATGCACTTAGGGAAATAAGGACTGAAAAGGAAAGGGAAAATCAAAGTATGAGGGATGAAGATGAATTTGCAAGAAAAAAAGACTTGGAAGAAGAAAAGGAAGCTGAGAAAAAGAAAGAAGAAGAAAGACAAGAGGCCAAGAGGGCCATACAAGCTCAGAAAGAGAGAAAAGAAGACGAAGAACTCAGGAGGTTGGCAGATGAACTCCAACTCCTGGAGAAAGAAAAAGAAATAAGAGAAAATTTGAGAGAAAAAGAAGAAAGAAGAAAAGAGGTTGAAGATTTTCTTGCAACCTTTGAGCCACTGCATAAGGCTCAAAGTGAGGCTGAGCAACTGCAAGAGATTGAAGAAGAGGCCTTTGAAGGGCCAAGTAAAGAAAAGGCAGAAAAAGAAAAAGAAGAAGAATCTAGTGAAGGCCAGAATGCGACCACATTTGGGCCGCATTCTGAGGTAGGCCAGGAAAAGGCCACTAAAGAGAACCAAACTGATGAGGCCCTTGATCCACTGCTTGAATATGACATTAGAGGACCTCCACCAGTTGCTAATAACACCTCTTCAGGAGAGAAAAAGGATGAAGAGCAAATTGAAGAAGAAGAGGCCGAGACCTCTAGTGATACCGAAACCGAATCAGATTCTGAGATAAAGAAATTGGACGATGATCAAGTCATCTCACAGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCCGTAGTGCCTCTAATTCGAGAGTTCTATGCTGGTTTGAGGGAAGAGAGCATGAGCATGACAATGGTGATAGGTAAAATGGTCAGTTTTTCTTCGGTTGACATCAACAGGGTGTACCGGATCAAGGCACCCCTGCATCCAAGAGGGAATGATGCGATTAAGAACCCCTCGGCCAAACAGATAAAAGAAGCATCGAAGATGGTGGCCAACAAGGGAGTTCAGTGGAAGGAGTCTCAAACAAAGGTGAAAACATTAGTGCCCAGTGATCTCAAGCCATAA

Coding sequence (CDS)

ATGCACGGGACGAGAGGCGTGAGACCAACGAGTTTTTCGCCAGTTGTTGTGGAACGAAGCACCAACGTTCAAACTCCTTCATCCTCGACAATGTCGGCCACTTCAAGGGAGAATCCGAGTGGTTCTTGTCAAAGAAGATCCATGCCCACCGATTCTCTCCACAAAACCCAAAAACTTGCGAGCCAACAATTGAGAAAACGCTCGAGGGAGTGGTTTGCTATGATCTGTGAGATGGGAGCTCAAAGGCCTGCAACTCTTGAGGAGAAAGCAAGGTTGCATGATGCTGAAGAATCCGCCAAAGTGGGAGAAAGTTCTTGGGAAAGAGAGACTCCATTGGGTAACGTCTCCAAACCTTCTACTAATCCAACTTCTTCTTGTAGGGAAAGGCCCTTTGTGACTTACAGTGCAAGGAAGAAAGATTTCAAGAAGGCTGAACCCGAAAAGCCTCTGATCATTGAGCCCCTTAAAGTGTTGGTTAGGAAGTATGTAATTGTCGTGCTTACTCTCTATGCAATATATGTTGATTTGAGCATCTTGATTAATTGTTGTGCATATTTCTATTTTGTGCCCGCCTGGCTAGCCGGCGCACAAGCCCTCATTATTGCTGAAGGTTACAGGACTAAACAAGATGCACTTAGGGAAATAAGGACTGAAAAGGAAAGGGAAAATCAAAGTATGAGGGATGAAGATGAATTTGCAAGAAAAAAAGACTTGGAAGAAGAAAAGGAAGCTGAGAAAAAGAAAGAAGAAGAAAGACAAGAGGCCAAGAGGGCCATACAAGCTCAGAAAGAGAGAAAAGAAGACGAAGAACTCAGGAGGTTGGCAGATGAACTCCAACTCCTGGAGAAAGAAAAAGAAATAAGAGAAAATTTGAGAGAAAAAGAAGAAAGAAGAAAAGAGGTTGAAGATTTTCTTGCAACCTTTGAGCCACTGCATAAGGCTCAAAGTGAGGCTGAGCAACTGCAAGAGATTGAAGAAGAGGCCTTTGAAGGGCCAAGTAAAGAAAAGGCAGAAAAAGAAAAAGAAGAAGAATCTAGTGAAGGCCAGAATGCGACCACATTTGGGCCGCATTCTGAGGTAGGCCAGGAAAAGGCCACTAAAGAGAACCAAACTGATGAGGCCCTTGATCCACTGCTTGAATATGACATTAGAGGACCTCCACCAGTTGCTAATAACACCTCTTCAGGAGAGAAAAAGGATGAAGAGCAAATTGAAGAAGAAGAGGCCGAGACCTCTAGTGATACCGAAACCGAATCAGATTCTGAGATAAAGAAATTGGACGATGATCAAGTCATCTCACAGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCCGTAGTGCCTCTAATTCGAGAGTTCTATGCTGGTTTGAGGGAAGAGAGCATGAGCATGACAATGGTGATAGGTAAAATGGTCAGTTTTTCTTCGGTTGACATCAACAGGGTGTACCGGATCAAGGCACCCCTGCATCCAAGAGGGAATGATGCGATTAAGAACCCCTCGGCCAAACAGATAAAAGAAGCATCGAAGATGGTGGCCAACAAGGGAGTTCAGTGGAAGGAGTCTCAAACAAAGGTGAAAACATTAGTGCCCAGTGATCTCAAGCCATAA

Protein sequence

MHGTRGVRPTSFSPVVVERSTNVQTPSSSTMSATSRENPSGSCQRRSMPTDSLHKTQKLASQQLRKRSREWFAMICEMGAQRPATLEEKARLHDAEESAKVGESSWERETPLGNVSKPSTNPTSSCRERPFVTYSARKKDFKKAEPEKPLIIEPLKVLVRKYVIVVLTLYAIYVDLSILINCCAYFYFVPAWLAGAQALIIAEGYRTKQDALREIRTEKERENQSMRDEDEFARKKDLEEEKEAEKKKEEERQEAKRAIQAQKERKEDEELRRLADELQLLEKEKEIRENLREKEERRKEVEDFLATFEPLHKAQSEAEQLQEIEEEAFEGPSKEKAEKEKEEESSEGQNATTFGPHSEVGQEKATKENQTDEALDPLLEYDIRGPPPVANNTSSGEKKDEEQIEEEEAETSSDTETESDSEIKKLDDDQVISQYKWQEFCAHPQEAVVPLIREFYAGLREESMSMTMVIGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSAKQIKEASKMVANKGVQWKESQTKVKTLVPSDLKP

Homology

The following BLAST results are available for this feature:

BLAST of Spg023628 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023628 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023628 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023628 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 209..229
None	No IPR available	COILS	Coil	Coil	coord: 232..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..426

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023628.1	Spg023628.1	mRNA