Spg023456 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023456
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING-type E3 ubiquitin transferase
Location	scaffold13: 861195 .. 862058 (-)
RNA-Seq Expression	Spg023456
Synteny	Spg023456

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACGAGTACAAGCTTCAACATTCCGGCGACTCAGTGCCCATCGAGCTCCCTGGAATGGTCATTGTCACCGCCATTTTAGTGTTCTTGTTGGTGCTCGTCTTCGTTCTTCTTCTCCAACTCTACGCCAGATGGTTATGGTCTCGCATTGAAGATCCCACCCCACTTCCTGTAGAAACTCGCCGCCGTCGCCGCCGCCGGTTCGAATTCTCCGTCGACCACGACCCCAATTCCGGAAGAGGCTTGGACCCCGCCGTCCTCCGGTCACTTCCTGTTCTGATATTCCACCCTGACAACTTCAAAGACGGGCTTGAATGTGCCGTTTGCCTCTCTGAGCTCGTCGAAGGTGAAAAGGCGAAGCTGCTTCATGATTGCTTCCATGGCTTCCATAGCGATTGTATAGATATGTGGTTTCAGTCACATTCCACCTGCCCTCTCTGCCGGAACCCCGTCACCGCCGCCGCAGAGTCCGGCGAGCTGCAGGATGAGGATTCTGCAACTGGGTTGTCCTCAGAATCTCCAACTTTCCCAACAAATGTATTGATTTGGGGAAATCAGGTCCAAATCACCTCCGCCGGAGTTTGTCTGGAAGTGGAAGAGGGCCCTTCTCAAAACCCTTTTCCGGCGGCTTCTTCATCGTCGGCGTCGGCATCGGCGTCGGCGTCGGCGAGTCACCCGGATGCAGAATTAGCTATAGATGTACAGAGTGATCTTGAATTTCCGCCACTGGCGCCTAATGAGGAGAGAAAGTTACCAGTTCCCACCAGATTGAGGTCATTGAAAAGGCTTTTGAGTAGGCAAAGAAGAGTGAATCCTTGTAATCCAAATTTAGCTAATGTTGAAATGGAACAATTGGCTTGA

mRNA sequence

ATGGAAGACGAGTACAAGCTTCAACATTCCGGCGACTCAGTGCCCATCGAGCTCCCTGGAATGGTCATTGTCACCGCCATTTTAGTGTTCTTGTTGGTGCTCGTCTTCGTTCTTCTTCTCCAACTCTACGCCAGATGGTTATGGTCTCGCATTGAAGATCCCACCCCACTTCCTGTAGAAACTCGCCGCCGTCGCCGCCGCCGGTTCGAATTCTCCGTCGACCACGACCCCAATTCCGGAAGAGGCTTGGACCCCGCCGTCCTCCGGTCACTTCCTGTTCTGATATTCCACCCTGACAACTTCAAAGACGGGCTTGAATGTGCCGTTTGCCTCTCTGAGCTCGTCGAAGGTGAAAAGGCGAAGCTGCTTCATGATTGCTTCCATGGCTTCCATAGCGATTGTATAGATATGTGGTTTCAGTCACATTCCACCTGCCCTCTCTGCCGGAACCCCGTCACCGCCGCCGCAGAGTCCGGCGAGCTGCAGGATGAGGATTCTGCAACTGGGTTGTCCTCAGAATCTCCAACTTTCCCAACAAATGTATTGATTTGGGGAAATCAGGTCCAAATCACCTCCGCCGGAGTTTGTCTGGAAGTGGAAGAGGGCCCTTCTCAAAACCCTTTTCCGGCGGCTTCTTCATCGTCGGCGTCGGCATCGGCGTCGGCGTCGGCGAGTCACCCGGATGCAGAATTAGCTATAGATGTACAGAGTGATCTTGAATTTCCGCCACTGGCGCCTAATGAGGAGAGAAAGTTACCAGTTCCCACCAGATTGAGGTCATTGAAAAGGCTTTTGAGTAGGCAAAGAAGAGTGAATCCTTGTAATCCAAATTTAGCTAATGTTGAAATGGAACAATTGGCTTGA

Coding sequence (CDS)

ATGGAAGACGAGTACAAGCTTCAACATTCCGGCGACTCAGTGCCCATCGAGCTCCCTGGAATGGTCATTGTCACCGCCATTTTAGTGTTCTTGTTGGTGCTCGTCTTCGTTCTTCTTCTCCAACTCTACGCCAGATGGTTATGGTCTCGCATTGAAGATCCCACCCCACTTCCTGTAGAAACTCGCCGCCGTCGCCGCCGCCGGTTCGAATTCTCCGTCGACCACGACCCCAATTCCGGAAGAGGCTTGGACCCCGCCGTCCTCCGGTCACTTCCTGTTCTGATATTCCACCCTGACAACTTCAAAGACGGGCTTGAATGTGCCGTTTGCCTCTCTGAGCTCGTCGAAGGTGAAAAGGCGAAGCTGCTTCATGATTGCTTCCATGGCTTCCATAGCGATTGTATAGATATGTGGTTTCAGTCACATTCCACCTGCCCTCTCTGCCGGAACCCCGTCACCGCCGCCGCAGAGTCCGGCGAGCTGCAGGATGAGGATTCTGCAACTGGGTTGTCCTCAGAATCTCCAACTTTCCCAACAAATGTATTGATTTGGGGAAATCAGGTCCAAATCACCTCCGCCGGAGTTTGTCTGGAAGTGGAAGAGGGCCCTTCTCAAAACCCTTTTCCGGCGGCTTCTTCATCGTCGGCGTCGGCATCGGCGTCGGCGTCGGCGAGTCACCCGGATGCAGAATTAGCTATAGATGTACAGAGTGATCTTGAATTTCCGCCACTGGCGCCTAATGAGGAGAGAAAGTTACCAGTTCCCACCAGATTGAGGTCATTGAAAAGGCTTTTGAGTAGGCAAAGAAGAGTGAATCCTTGTAATCCAAATTTAGCTAATGTTGAAATGGAACAATTGGCTTGA

Protein sequence

MEDEYKLQHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPVETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPTNVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDLEFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQLA

Homology

[Close]

BLAST of Spg023456 vs. NCBI nr
Match: XP_023527880.1 (RING-H2 finger protein ATL3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.0 bits (1281), Expect = 5.3e-137
Identity = 253/288 (87.85%), Postives = 266/288 (92.36%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDP+PLPV
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS  HDPNSGRGLDP +LRSLPVLIFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAIHDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAA+SGELQDEDSATGLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAADSGELQDEDSATGLSSESPTFPT 180

Query: 181 NVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDL 240
           NVLIWGNQ Q+TSAG CLEVEE  SQNPFPA SS       SAS+S+P AEL IDVQ+DL
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEESSSQNPFPATSS-------SASSSNPAAELVIDVQNDL 240

Query: 241 EFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQLA 288
           +FPPLAPNE+ KLPV TRLRSLKRLLSRQRRVNPC+PN ANVEMEQLA
Sbjct: 241 QFPPLAPNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

[Close]

BLAST of Spg023456 vs. NCBI nr
Match: KAG7018248.1 (RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494.6 bits (1272), Expect = 5.8e-136
Identity = 251/288 (87.15%), Postives = 266/288 (92.36%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDP+PLPV
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS   DPNSGRGLDP +LRSLPVLIFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           AKLLHDCFHGFHSDCIDMWF+SHSTCPLCRNPVTAAA+SGELQDEDSA+GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVTAAADSGELQDEDSASGLSSESPTFPT 180

Query: 181 NVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDL 240
           NVLIWGNQ Q+TSAG CLEVEEG SQNPFPA SS       SAS+S+P AEL IDVQ+DL
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSS-------SASSSNPAAELVIDVQNDL 240

Query: 241 EFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQLA 288
           +FPPLAPNE+ KLPV TRLRSLKRLLSRQRRVNPC+PN ANVEMEQLA
Sbjct: 241 QFPPLAPNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

[Close]

BLAST of Spg023456 vs. NCBI nr
Match: XP_022980687.1 (RING-H2 finger protein ATL60-like [Cucurbita maxima])

HSP 1 Score: 494.2 bits (1271), Expect = 7.6e-136
Identity = 252/288 (87.50%), Postives = 264/288 (91.67%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV
Sbjct: 1   MEDDYKLSQHSGDSVSIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS   DPNSGRGLDP +LRSLPVLIFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAA+SGELQDEDSATGLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAADSGELQDEDSATGLSSESPTFPT 180

Query: 181 NVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDL 240
           NVLIWGNQ Q+TSAG CLEVEEG SQNPFPA SS       SAS+S+  AEL IDVQ+DL
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSS-------SASSSNQAAELVIDVQNDL 240

Query: 241 EFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQLA 288
           +FPPLAPNE+ KLPV TRLRSLKRLLSRQRRVNPC+PN  NVEMEQLA
Sbjct: 241 QFPPLAPNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSGNVEMEQLA 281

[Close]

BLAST of Spg023456 vs. NCBI nr
Match: KAG6581797.1 (RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 491.9 bits (1265), Expect = 3.8e-135
Identity = 250/288 (86.81%), Postives = 265/288 (92.01%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDP+PLPV
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS   DPNSGRGLDP +LRSLPVLIFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           AKLLHDCFHGFHSDCIDMWF+SHSTCPLCRNPVTAAA+SG LQDEDSA+GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVTAAADSGGLQDEDSASGLSSESPTFPT 180

Query: 181 NVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDL 240
           NVLIWGNQ Q+TSAG CLEVEEG SQNPFPA SS       SAS+S+P AEL IDVQ+DL
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSS-------SASSSNPAAELVIDVQNDL 240

Query: 241 EFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQLA 288
           +FPPLAPNE+ KLPV TRLRSLKRLLSRQRRVNPC+PN ANVEMEQLA
Sbjct: 241 QFPPLAPNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

[Close]

BLAST of Spg023456 vs. NCBI nr
Match: XP_022955893.1 (RING-H2 finger protein ATL3-like [Cucurbita moschata])

HSP 1 Score: 491.1 bits (1263), Expect = 6.4e-135
Identity = 249/288 (86.46%), Postives = 265/288 (92.01%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDP+PLPV
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS   DPNSGRGLDP +LRSLPVLIFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           AKLLHDCFHGFHSDCIDMWF+SHSTCPLCRNPVTAAA+SGELQDEDSA+GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVTAAADSGELQDEDSASGLSSESPTFPT 180

Query: 181 NVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDL 240
           NVLIWGNQ Q+TSAG CLEV+EG SQNPFPAA S       SAS+S+P AEL IDVQ+DL
Sbjct: 181 NVLIWGNQEQVTSAGACLEVKEGSSQNPFPAACS-------SASSSNPAAELVIDVQNDL 240

Query: 241 EFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQLA 288
           +FPPL PNE+ KLPV TRLRSLKRLLSRQRRVNPC+PN ANVEMEQLA
Sbjct: 241 QFPPLTPNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

[Close]

BLAST of Spg023456 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.9e-46
Identity = 123/316 (38.92%), Postives = 168/316 (53.16%), Query Frame = 0


Query: 3   DEYKLQHS---GDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRI-------- 62
           D+ +  HS   GD    E+   +I+TAI+V  + ++FVL+L LYA+  W RI        
Sbjct: 2   DDNRSTHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQ 61

Query: 63  ---------EDPTPL-PVETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNF 122
                    ED + + P    RR+RRRF F    D  S  GL    L SLP++ F  D+ 
Sbjct: 62  QQQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSC 121

Query: 123 KDGLECAVCLSELVEGEKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGEL 182
           KDGLEC++CLSELV+G+KA+LL  C H FH +CIDMWFQSHSTCP+CRN V    ++   
Sbjct: 122 KDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSK 181

Query: 183 QDE----------------DSATGLSSESPTFPTNVLIWGNQVQITSAGVCLEV-EEGPS 242
           + E                D+ + LS+ SP FPTNVL+WG Q Q+++    +   E+G +
Sbjct: 182 RVEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQDQVSTGNTNVGTQEDGAA 241

Query: 243 QNPFPAASSSSASASASASASHPDAELAIDVQSDLEFPPLAPNEERKLPVPTRLRSLKRL 281
            N    AS S  +     S S           S + F  +   EE K P+ TRLRSL+R 
Sbjct: 242 GN---GASQSQEAVVLDISDSSSRNHNVSSSSSSMRF--IVEEEEAKSPMTTRLRSLRRF 301

[Close]

BLAST of Spg023456 vs. ExPASy Swiss-Prot
Match: P0C035 (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.9e-43
Identity = 121/292 (41.44%), Postives = 161/292 (55.14%), Query Frame = 0


Query: 17  ELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIE----------DPTPLPVETRRRRR 76
           E  G V++ +I+     ++F+LLL LYAR  W R+E          D     V  R  RR
Sbjct: 19  ETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRR 78

Query: 77  RRFEFS-VDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEKAKLLHD 136
           RRF F+    DP    GLD  +L+S+ V++F   +FKDGLECAVCLS+LV+G+KA++L  
Sbjct: 79  RRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPR 138

Query: 137 CFHGFHSDCIDMWFQSHSTCPLCRNPVTAAA----------------ESGE-------LQ 196
           C HGFH DCIDMWFQSHSTCPLCRN V +                  ESG         Q
Sbjct: 139 CNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHNPSQ 198

Query: 197 DEDSATGLSSESPTFPTNVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASA 256
           D+      S+E  +FPTNVL+WG+Q Q+ SAG+ +  EE PS N   AAS +     +S+
Sbjct: 199 DQSFVHEFSTEPLSFPTNVLVWGDQNQVRSAGLVV-TEESPSGN--FAASYNDHQQESSS 258

Query: 257 SASHPDAELAIDV--QSDLEFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVN 273
           + S     + +D+   S          EE K P+ TRLR LK +LSR++  N
Sbjct: 259 TRSQEVTAVVVDIPDNSSENLSERIDEEEPKSPMFTRLRLLKNVLSREKTNN 307

[Close]

BLAST of Spg023456 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 4.1e-23
Identity = 84/263 (31.94%), Postives = 123/263 (46.77%), Query Frame = 0


Query: 18  LPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPVETRRRRRRRFEFSVDHDP 77
           + G ++++AI++   V++ ++ L LYARW   R      L   +R RR     F+ D   
Sbjct: 26  MSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR-RRHLRRRSRNRRATMVFFTADPST 85

Query: 78  N-----SGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEKAKLLHDCFHGFHS 137
                 + RGLDP V++SLPV  F  +  KD +ECAVCLSE  E E  ++L +C H FH 
Sbjct: 86  AATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHV 145

Query: 138 DCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPTNVLIWGNQVQITS 197
           DCIDMWF SHSTCPLCR+ V            +S  G+ S +      V+I         
Sbjct: 146 DCIDMWFHSHSTCPLCRSLV------------ESLAGIESTAAAREREVVI------AVD 205

Query: 198 AGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDLEFPPL-----APN 257
           +   L +E   S         S +S      +    A + +  ++  EF        +P 
Sbjct: 206 SDPVLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPA 265

Query: 258 EERKLPVPTRLRSLKRLLSRQRR 271
            +      +R+ S  R+LSR RR
Sbjct: 266 SQSFRSPMSRMLSFTRMLSRDRR 269

[Close]

BLAST of Spg023456 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.5e-21
Identity = 59/163 (36.20%), Postives = 83/163 (50.92%), Query Frame = 0


Query: 22  VIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPVETRRRRRRR------------- 81
           V++ A++  LLV++FVLLL  YAR+ WS            RRRRRR              
Sbjct: 29  VLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRIIPS 88

Query: 82  -----FEFSVDHD----PNSGRGLDPAVLRSLPVLIFHPDNFKDG--LECAVCLSELVEG 141
                F+  V           +GLD +V+ S+P+ ++  +  ++    EC +CL     G
Sbjct: 89  LPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAG 148

Query: 142 EKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGE 161
           +  + L +C HGFH +CIDMW  SHSTCPLCR+PV AA    E
Sbjct: 149 DFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEE 191

[Close]

BLAST of Spg023456 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.3e-20
Identity = 59/165 (35.76%), Postives = 87/165 (52.73%), Query Frame = 0


Query: 18  LPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPVETRRRRRRRFEFSVDHDP 77
           L G +++++++V  + ++ +L    YARWL+ R           R RRR R         
Sbjct: 24  LNGKIMLSSVIVLFVAVIMILCFHSYARWLFRR--------HNRRIRRRIRSHLRTLSAS 83

Query: 78  NSGRGLDPAVLRSLPVLIF---HPDNFKDGLECAVCLSELVEGEKAKLLHDCFHGFHSDC 137
              + LD AVL  +P+ ++   +P   ++  EC+VCLSE  E ++ +LL  C H FH DC
Sbjct: 84  PRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDC 143

Query: 138 IDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           ID WF+S STCPLCR PV         Q  ++ +  SS   TFPT
Sbjct: 144 IDTWFRSRSTCPLCRAPV-----QPPFQVIETGSSSSSSPLTFPT 175

[Close]

BLAST of Spg023456 vs. ExPASy TrEMBL
Match: A0A6J1IRZ5 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111479984 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.7e-136
Identity = 252/288 (87.50%), Postives = 264/288 (91.67%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV
Sbjct: 1   MEDDYKLSQHSGDSVSIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS   DPNSGRGLDP +LRSLPVLIFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAA+SGELQDEDSATGLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAADSGELQDEDSATGLSSESPTFPT 180

Query: 181 NVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDL 240
           NVLIWGNQ Q+TSAG CLEVEEG SQNPFPA SS       SAS+S+  AEL IDVQ+DL
Sbjct: 181 NVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSS-------SASSSNQAAELVIDVQNDL 240

Query: 241 EFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQLA 288
           +FPPLAPNE+ KLPV TRLRSLKRLLSRQRRVNPC+PN  NVEMEQLA
Sbjct: 241 QFPPLAPNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSGNVEMEQLA 281

[Close]

BLAST of Spg023456 vs. ExPASy TrEMBL
Match: A0A6J1GV98 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111457742 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.1e-135
Identity = 249/288 (86.46%), Postives = 265/288 (92.01%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MED+YKL QHSGDSV IELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDP+PLPV
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS   DPNSGRGLDP +LRSLPVLIFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           AKLLHDCFHGFHSDCIDMWF+SHSTCPLCRNPVTAAA+SGELQDEDSA+GLSSESPTFPT
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVTAAADSGELQDEDSASGLSSESPTFPT 180

Query: 181 NVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDL 240
           NVLIWGNQ Q+TSAG CLEV+EG SQNPFPAA S       SAS+S+P AEL IDVQ+DL
Sbjct: 181 NVLIWGNQEQVTSAGACLEVKEGSSQNPFPAACS-------SASSSNPAAELVIDVQNDL 240

Query: 241 EFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQLA 288
           +FPPL PNE+ KLPV TRLRSLKRLLSRQRRVNPC+PN ANVEMEQLA
Sbjct: 241 QFPPLTPNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQLA 281

[Close]

BLAST of Spg023456 vs. ExPASy TrEMBL
Match: A0A5A7UJD5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G001230 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 6.3e-128
Identity = 238/288 (82.64%), Postives = 255/288 (88.54%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MEDEYKL QHSGDSV IELPGMVI+TAILVF LVLVFVLLLQLYA+WLWSRIEDPTPLP+
Sbjct: 1   MEDEYKLSQHSGDSVTIELPGMVIITAILVFFLVLVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS  HDPNS RGLDP VLRSLPV+IFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPV-TAAAESGELQDEDSATGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPV TA A++ EL DEDS +GLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAVADTAELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSD 240
           TNVLIWGNQ Q+TSAG  LEVEEGPSQN FPAASS       SAS ++PDAEL IDVQ++
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEEGPSQNHFPAASS-------SASTTYPDAELVIDVQNE 240

Query: 241 LEFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQL 287
           ++FPPL  NE+ KLPV TRLRSLKRLLSRQRRVNPCN N AN E EQL
Sbjct: 241 VQFPPLTTNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281

[Close]

BLAST of Spg023456 vs. ExPASy TrEMBL
Match: A0A1S3CCE4 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499208 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 6.3e-128
Identity = 238/288 (82.64%), Postives = 255/288 (88.54%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MEDEYKL QHSGDSV IELPGMVI+TAILVF LVLVFVLLLQLYA+WLWSRIEDPTPLP+
Sbjct: 1   MEDEYKLSQHSGDSVTIELPGMVIITAILVFFLVLVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS  HDPNS RGLDP VLRSLPV+IFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPV-TAAAESGELQDEDSATGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPV TA A++ EL DEDS +GLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAVADTAELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSD 240
           TNVLIWGNQ Q+TSAG  LEVEEGPSQN FPAASS       SAS ++PDAEL IDVQ++
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEEGPSQNHFPAASS-------SASTTYPDAELVIDVQNE 240

Query: 241 LEFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQL 287
           ++FPPL  NE+ KLPV TRLRSLKRLLSRQRRVNPCN N AN E EQL
Sbjct: 241 VQFPPLTTNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281

[Close]

BLAST of Spg023456 vs. ExPASy TrEMBL
Match: A0A0A0L962 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G646670 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.1e-124
Identity = 234/288 (81.25%), Postives = 251/288 (87.15%), Query Frame = 0


Query: 1   MEDEYKL-QHSGDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60
           MEDEYKL QHS DSV IELPGMVI+TAILVF L+LVFVLLLQLYA+WLWSRIEDPTPLP+
Sbjct: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120
           ETRRRRRRRFEFS  HDPNS RGLDP VLRSLPV+IFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPV-TAAAESGELQDEDSATGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPV TAAA++ EL DEDS +GLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSD 240
           TNVLIWGNQ Q+TSAG  LEVEE   QN FPAASS       SAS ++PDAEL IDVQ+D
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASS-------SASTAYPDAELVIDVQND 240

Query: 241 LEFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVNPCNPNLANVEMEQL 287
           ++F PL  NE+ KLPV TRLRSLKRLLSRQRRVNPCN N AN E EQL
Sbjct: 241 VQFSPLTTNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281

[Close]

BLAST of Spg023456 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 7.0e-47
Identity = 123/316 (38.92%), Postives = 168/316 (53.16%), Query Frame = 0


Query: 3   DEYKLQHS---GDSVPIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRI-------- 62
           D+ +  HS   GD    E+   +I+TAI+V  + ++FVL+L LYA+  W RI        
Sbjct: 2   DDNRSTHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQ 61

Query: 63  ---------EDPTPL-PVETRRRRRRRFEFSVDHDPNSGRGLDPAVLRSLPVLIFHPDNF 122
                    ED + + P    RR+RRRF F    D  S  GL    L SLP++ F  D+ 
Sbjct: 62  QQQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSC 121

Query: 123 KDGLECAVCLSELVEGEKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGEL 182
           KDGLEC++CLSELV+G+KA+LL  C H FH +CIDMWFQSHSTCP+CRN V    ++   
Sbjct: 122 KDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSK 181

Query: 183 QDE----------------DSATGLSSESPTFPTNVLIWGNQVQITSAGVCLEV-EEGPS 242
           + E                D+ + LS+ SP FPTNVL+WG Q Q+++    +   E+G +
Sbjct: 182 RVEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQDQVSTGNTNVGTQEDGAA 241

Query: 243 QNPFPAASSSSASASASASASHPDAELAIDVQSDLEFPPLAPNEERKLPVPTRLRSLKRL 281
            N    AS S  +     S S           S + F  +   EE K P+ TRLRSL+R 
Sbjct: 242 GN---GASQSQEAVVLDISDSSSRNHNVSSSSSSMRF--IVEEEEAKSPMTTRLRSLRRF 301

[Close]

BLAST of Spg023456 vs. TAIR 10
Match: AT1G53820.1 (RING/U-box superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 5.6e-44
Identity = 121/292 (41.44%), Postives = 161/292 (55.14%), Query Frame = 0


Query: 17  ELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIE----------DPTPLPVETRRRRR 76
           E  G V++ +I+     ++F+LLL LYAR  W R+E          D     V  R  RR
Sbjct: 19  ETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRR 78

Query: 77  RRFEFS-VDHDPNSGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEKAKLLHD 136
           RRF F+    DP    GLD  +L+S+ V++F   +FKDGLECAVCLS+LV+G+KA++L  
Sbjct: 79  RRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPR 138

Query: 137 CFHGFHSDCIDMWFQSHSTCPLCRNPVTAAA----------------ESGE-------LQ 196
           C HGFH DCIDMWFQSHSTCPLCRN V +                  ESG         Q
Sbjct: 139 CNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHNPSQ 198

Query: 197 DEDSATGLSSESPTFPTNVLIWGNQVQITSAGVCLEVEEGPSQNPFPAASSSSASASASA 256
           D+      S+E  +FPTNVL+WG+Q Q+ SAG+ +  EE PS N   AAS +     +S+
Sbjct: 199 DQSFVHEFSTEPLSFPTNVLVWGDQNQVRSAGLVV-TEESPSGN--FAASYNDHQQESSS 258

Query: 257 SASHPDAELAIDV--QSDLEFPPLAPNEERKLPVPTRLRSLKRLLSRQRRVN 273
           + S     + +D+   S          EE K P+ TRLR LK +LSR++  N
Sbjct: 259 TRSQEVTAVVVDIPDNSSENLSERIDEEEPKSPMFTRLRLLKNVLSREKTNN 307

[Close]

BLAST of Spg023456 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-24
Identity = 84/263 (31.94%), Postives = 123/263 (46.77%), Query Frame = 0


Query: 18  LPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPVETRRRRRRRFEFSVDHDP 77
           + G ++++AI++   V++ ++ L LYARW   R      L   +R RR     F+ D   
Sbjct: 26  MSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR-RRHLRRRSRNRRATMVFFTADPST 85

Query: 78  N-----SGRGLDPAVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEKAKLLHDCFHGFHS 137
                 + RGLDP V++SLPV  F  +  KD +ECAVCLSE  E E  ++L +C H FH 
Sbjct: 86  AATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHV 145

Query: 138 DCIDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPTNVLIWGNQVQITS 197
           DCIDMWF SHSTCPLCR+ V            +S  G+ S +      V+I         
Sbjct: 146 DCIDMWFHSHSTCPLCRSLV------------ESLAGIESTAAAREREVVI------AVD 205

Query: 198 AGVCLEVEEGPSQNPFPAASSSSASASASASASHPDAELAIDVQSDLEFPPL-----APN 257
           +   L +E   S         S +S      +    A + +  ++  EF        +P 
Sbjct: 206 SDPVLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPA 265

Query: 258 EERKLPVPTRLRSLKRLLSRQRR 271
            +      +R+ S  R+LSR RR
Sbjct: 266 SQSFRSPMSRMLSFTRMLSRDRR 269

[Close]

BLAST of Spg023456 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 102.8 bits (255), Expect = 4.6e-22
Identity = 59/163 (36.20%), Postives = 83/163 (50.92%), Query Frame = 0


Query: 22  VIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPVETRRRRRRR------------- 81
           V++ A++  LLV++FVLLL  YAR+ WS            RRRRRR              
Sbjct: 29  VLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRIIPS 88

Query: 82  -----FEFSVDHD----PNSGRGLDPAVLRSLPVLIFHPDNFKDG--LECAVCLSELVEG 141
                F+  V           +GLD +V+ S+P+ ++  +  ++    EC +CL     G
Sbjct: 89  LPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAG 148

Query: 142 EKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAESGE 161
           +  + L +C HGFH +CIDMW  SHSTCPLCR+PV AA    E
Sbjct: 149 DFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEE 191

[Close]

BLAST of Spg023456 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 6.6e-21
Identity = 59/165 (35.76%), Postives = 87/165 (52.73%), Query Frame = 0


Query: 18  LPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPVETRRRRRRRFEFSVDHDP 77
           L G +++++++V  + ++ +L    YARWL+ R           R RRR R         
Sbjct: 24  LNGKIMLSSVIVLFVAVIMILCFHSYARWLFRR--------HNRRIRRRIRSHLRTLSAS 83

Query: 78  NSGRGLDPAVLRSLPVLIF---HPDNFKDGLECAVCLSELVEGEKAKLLHDCFHGFHSDC 137
              + LD AVL  +P+ ++   +P   ++  EC+VCLSE  E ++ +LL  C H FH DC
Sbjct: 84  PRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDC 143

Query: 138 IDMWFQSHSTCPLCRNPVTAAAESGELQDEDSATGLSSESPTFPT 180
           ID WF+S STCPLCR PV         Q  ++ +  SS   TFPT
Sbjct: 144 IDTWFRSRSTCPLCRAPV-----QPPFQVIETGSSSSSSPLTFPT 175

The following BLAST results are available for this feature:

BLAST of Spg023456 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527880.1	5.3e-137	87.85	RING-H2 finger protein ATL3-like [Cucurbita pepo subsp. pepo]	[more]
KAG7018248.1	5.8e-136	87.15	RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022980687.1	7.6e-136	87.50	RING-H2 finger protein ATL60-like [Cucurbita maxima]	[more]
KAG6581797.1	3.8e-135	86.81	RING-H2 finger protein ATL3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022955893.1	6.4e-135	86.46	RING-H2 finger protein ATL3-like [Cucurbita moschata]	[more]

BLAST of Spg023456 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF63	9.9e-46	38.92	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1	[more]
P0C035	7.9e-43	41.44	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1	[more]
Q8L9T5	4.1e-23	31.94	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LUZ9	6.5e-21	36.20	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
O22255	9.3e-20	35.76	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]

BLAST of Spg023456 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IRZ5	3.7e-136	87.50	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111479984 P...	[more]
A0A6J1GV98	3.1e-135	86.46	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111457742...	[more]
A0A5A7UJD5	6.3e-128	82.64	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CCE4	6.3e-128	82.64	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499208 PE=3 ...	[more]
A0A0A0L962	1.1e-124	81.25	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G646670 PE...	[more]

BLAST of Spg023456 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72310.1	7.0e-47	38.92	RING/U-box superfamily protein	[more]
AT1G53820.1	5.6e-44	41.44	RING/U-box superfamily protein	[more]
AT3G16720.1	2.9e-24	31.94	TOXICOS EN LEVADURA 2	[more]
AT5G58580.1	4.6e-22	36.20	TOXICOS EN LEVADURA 63	[more]
AT2G47560.1	6.6e-21	35.76	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 107..148 e-value: 7.3E-6 score: 35.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 106..149 e-value: 5.3E-12 score: 45.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 107..149 score: 12.149959
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 86..158 e-value: 1.8E-18 score: 67.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..228
None	No IPR available	PANTHER	PTHR45676:SF132	RING-H2 FINGER PROTEIN ATL3	coord: 8..284
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 106..149 e-value: 1.5318E-16 score: 70.0315
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 87..154
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 8..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023456.1	Spg023456.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane