Spg023410 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGATTCCCAAAACCTCTCAGTGTCTGGCTATGCGGATGATGCCTCCCCTTCATCGTCGGAGGTGGAAGGACCTCTCCGAGACGCCATTTCCTCCCTTAGTGAGGAAAATGAGAACCAAACCGAGGGAAAGCCAAGCCAAGACTCCATGGAAACAGAGGAGAATGAGGTCATCAACGTCGAGCAAACTCCCATGGCCGAACCTTCCATCTCCACAGCCAACCCTTCAGAGGTGCTCAATATTGCACCTCTGAACACTTCTACCTTCACCGTCCAACCCGTCACCCTCCAACCTGCCCAAAACATCTCCATCCCTCGAAACCTAACCCCATTTCCATCCCCATTCCCTTTGGTACCCCTCCTTCTTCCACCCCCAGATTCTTCAGCTTCTCTCGCATCAACCACCAACCCTTCATCTTCTTCCTCTTCGCCCGCAAACACTTCCCACCCACCATCCACCTCAGCGCAACCCACTTCGTCGCAGTTTTATGAGTGGGAAGTGGCCGCATGGAACTCCTTGATGGGAGAATTAGGCGAGGAAGGCGAAGCAATTCATCTGCGAGAAGAACAAGAAAAGGCTGCCGCAGAGGAAACCGCATGCAAGGCAGCCGCAGATGAAAAAGCAGCCAAAGAAAAAGAGGGCTCCAGCAAGTAGGCGAAAGATCCGGTCGCCGCAGAAGTTGCCGCATCCAACTTAGCAATCATTGCGGCAGCTCTAGACGTGGAAGCTTCTAATTCCGAGGATGAGCTCCCCCTAACTCCTTGCCGCAACATCCAGTCCACGGGGGTAATCATCCGAGAACCCTCTGAAAGACCTGCGGCAGTCCCAAACAAGAAACGGAAAGCGCCCACCGCATCCAAAAGCAAAGGAAAAGAAAAAGTGGGCGCAGGAAAAGAAAAAGTGGGCGAGGAATGGGGGAAGTTCCATGAAAAACGAGGTTTCAGCTGCACCCTCCGGCCAACGATGACCGAGTAGATCTCCCAGCGCAAATGGGAAATCGTTTGCCAAAACCCTCGCAACTATGCCCCTGCGTTAGTCCACGACTTCTACCCGACGCAGTGGTAAGAAGAAGTCGACGAAGTTTTAGTGAGACGTCACGCAGTCGCATTCTCCTTCGCACACATCAACAATGTATTCGAGCTGCGAGACATCCCAAATGCAGAAGGGAATGCGCTCCTCGACTATCTCGACGATGACTTACTGAGCGCAGTACTTCTTGCGGTGGCCCGACCTGGAGGCAAATGGGACGGCCACGGCACTGCGAGGACCCTGAAGTTGCAGCTGCTCGACTTCGAGGCCAATTGGTGGATGCATTGGGTGAAGAATCGCATCATGCTCACAACGCATGATGCCACATTGAGCCTCCAACGGGTAATTCTGGTTTATTGCATCATGAAGGGAACCCCAATCGACTTGGGCCAAATCCTCGTCAAAACATTGAGTCAGACTACCGCAAAACCTAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACTCGGTTATGTCGCGCATCTGGCCTCGTGCCCGCAACAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGTGCGCGTAACCAGCACCCGCGATAGGCGTTTGCAAGGAAGCACGCAGCAACCAGCTCCCGCATCCCAACCCACCGAACCTACAGCTCTTGCGCCTGAGAAGCCAAAGAAAAAAAGGCGCAAGCAAACTGTGGGCAGGAAAGCACTGTCTGCACCCAACCTCAGGGATCCTTGCCACCACAGCAAGAAAGCTTGCCACCGCCACCTCCGCCACCGCCACCTCCAATTGTCCAAAGCACACCTCCTCCGCAGCACAACAATGACTTGCGAACAGAGGAGATTTTTGAAGACTCATTGTCGAGCCCCACTCGCAATGATGAAGTTCCTGCGCCGAACCTCTCACCGCAAGCCACAGCTTCTGCGAGCACAACTCAGGTTGGGACTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGCTGCGGTGGATAATTCTAGAAAGTGTAGAGCCCCTACGCCGGCAGCAAGAAAGGATGTGCCAGCAACAAGAGTTGTTGCGCAAGCAACAAGACGAACTGTCGCAGTGGGTAAATGCTTTAGTCCTTTTTCTAATGCCATGGACTGAAGGTTTTGGCCGCTTGCCAGTCACGCCAAACTTGTTTGCACGACCTGCTGGGCAACAAAGACCCCCTAGCGCAGGCCCATCACAAGTACGCGGATCCATGCCTCCGCCTGCGCCGAGGGAGACAAGACCACCTCCACCACCACCACCGCAGGAGTAG ATGTCCGATTCCCAAAACCTCTCAGTGTCTGGCTATGCGGATGATGCCTCCCCTTCATCGTCGGAGGTGGAAGGACCTCTCCGAGACGCCATTTCCTCCCTTAGTGAGGAAAATGAGAACCAAACCGAGGGAAAGCCAAGCCAAGACTCCATGGAAACAGAGGAGAATGAGGTCATCAACGTCGAGCAAACTCCCATGGCCGAACCTTCCATCTCCACAGCCAACCCTTCAGAGGTGCTCAATATTGCACCTCTGAACACTTCTACCTTCACCGTCCAACCCGTCACCCTCCAACCTGCCCAAAACATCTCCATCCCTCGAAACCTAACCCCATTTCCATCCCCATTCCCTTTGGTACCCCTCCTTCTTCCACCCCCAGATTCTTCAGCTTCTCTCGCATCAACCACCAACCCTTCATCTTCTTCCTCTTCGCCCGCAAACACTTCCCACCCACCATCCACCTCAGCGCAACCCACTTCGTCGCAGTTTTATGAGTGGGAAGTGGCCGCATGGAACTCCTTGATGGGAGAATTAGGCGAGGAAGGCGAAGCAATTCATCTGCGAGAAGAACAAGAAAAGGCTGCCGCAGAGGAAACCGCATGCAAGGCAGCCGCAGATGAAAAAGCAGCCAAAGAAAAAGAGGGCTCCAGCAAACCTGCGGCAGTCCCAAACAAGAAACGGAAAGCGCCCACCGCATCCAAAAGCAAAGGAAAAGAAAAAGTGGGCGCAGGAAAAGAAAAAGTGGGCGAGGAATGGGGGAAGTTCCATGAAAAACGAGTCGCATTCTCCTTCGCACACATCAACAATGTATTCGAGCTGCGAGACATCCCAAATGCAGAAGGGAATGCGCTCCTCGACTATCTCGACGATGACTTACTGAGCGCAGTACTTCTTGCGGTGGCCCGACCTGGAGGCAAATGGGACGGCCACGGCACTGCGAGGACCCTGAAGTTGCAGCTGCTCGACTTCGAGGCCAATTGGTGGATGCATTGGGTGAAGAATCGCATCATGCTCACAACGCATGATGCCACATTGAGCCTCCAACGGGTAATTCTGGTTTATTGCATCATGAAGGGAACCCCAATCGACTTGGGCCAAATCCTCGTCAAAACATTGAGTCAGACTACCGCAAAACCTAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACTCGGTTATGTCGCGCATCTGGCCTCGTGCCCGCAACAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGTGCGCGTAACCAGCACCCGCGATAGGCGTTTGCAAGGAAGCACGCAGCAACCAGCTCCCGCATCCCAACCCACCGAACCTACAGCTCTTGCGCCTGAGAAGCCAAAGAAAAAAAGGCGCAAGCAAACTGTGGGCAGGAAAGCACTGTCTGCACCCAACCTCAGGGATCCTTGCCACCACAGCAAGAAAGCTTGCCACCGCCACCTCCGCCACCGCCACCTCCAATTCCCCACTCGCAATGATGAAGTTCCTGCGCCGAACCTCTCACCGCAAGCCACAGCTTCTGCGAGCACAACTCAGGTTGGGACTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGCTGCGGTGGATAATTCTAGAAAGTGTAGAGCCCCTACGCCGGCAGCAAGAAAGGATGTGCCAGCAACAAGAGTTGTTGCGCAAGCAACAAGACGAACTGTCGCAGTGGGTAAATGCTTTAGTCCTTTTTCTAATGCCATGGACTGAAGGTTTTGGCCGCTTGCCAGTCACGCCAAACTTGTTTGCACGACCTGCTGGGCAACAAAGACCCCCTAGCGCAGGCCCATCACAAGTACGCGGATCCATGCCTCCGCCTGCGCCGAGGGAGACAAGACCACCTCCACCACCACCACCGCAGGAGTAG ATGTCCGATTCCCAAAACCTCTCAGTGTCTGGCTATGCGGATGATGCCTCCCCTTCATCGTCGGAGGTGGAAGGACCTCTCCGAGACGCCATTTCCTCCCTTAGTGAGGAAAATGAGAACCAAACCGAGGGAAAGCCAAGCCAAGACTCCATGGAAACAGAGGAGAATGAGGTCATCAACGTCGAGCAAACTCCCATGGCCGAACCTTCCATCTCCACAGCCAACCCTTCAGAGGTGCTCAATATTGCACCTCTGAACACTTCTACCTTCACCGTCCAACCCGTCACCCTCCAACCTGCCCAAAACATCTCCATCCCTCGAAACCTAACCCCATTTCCATCCCCATTCCCTTTGGTACCCCTCCTTCTTCCACCCCCAGATTCTTCAGCTTCTCTCGCATCAACCACCAACCCTTCATCTTCTTCCTCTTCGCCCGCAAACACTTCCCACCCACCATCCACCTCAGCGCAACCCACTTCGTCGCAGTTTTATGAGTGGGAAGTGGCCGCATGGAACTCCTTGATGGGAGAATTAGGCGAGGAAGGCGAAGCAATTCATCTGCGAGAAGAACAAGAAAAGGCTGCCGCAGAGGAAACCGCATGCAAGGCAGCCGCAGATGAAAAAGCAGCCAAAGAAAAAGAGGGCTCCAGCAAACCTGCGGCAGTCCCAAACAAGAAACGGAAAGCGCCCACCGCATCCAAAAGCAAAGGAAAAGAAAAAGTGGGCGCAGGAAAAGAAAAAGTGGGCGAGGAATGGGGGAAGTTCCATGAAAAACGAGTCGCATTCTCCTTCGCACACATCAACAATGTATTCGAGCTGCGAGACATCCCAAATGCAGAAGGGAATGCGCTCCTCGACTATCTCGACGATGACTTACTGAGCGCAGTACTTCTTGCGGTGGCCCGACCTGGAGGCAAATGGGACGGCCACGGCACTGCGAGGACCCTGAAGTTGCAGCTGCTCGACTTCGAGGCCAATTGGTGGATGCATTGGGTGAAGAATCGCATCATGCTCACAACGCATGATGCCACATTGAGCCTCCAACGGGTAATTCTGGTTTATTGCATCATGAAGGGAACCCCAATCGACTTGGGCCAAATCCTCGTCAAAACATTGAGTCAGACTACCGCAAAACCTAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACTCGGTTATGTCGCGCATCTGGCCTCGTGCCCGCAACAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGTGCGCGTAACCAGCACCCGCGATAGGCGTTTGCAAGGAAGCACGCAGCAACCAGCTCCCGCATCCCAACCCACCGAACCTACAGCTCTTGCGCCTGAGAAGCCAAAGAAAAAAAGGCGCAAGCAAACTGTGGGCAGGAAAGCACTGTCTGCACCCAACCTCAGGGATCCTTGCCACCACAGCAAGAAAGCTTGCCACCGCCACCTCCGCCACCGCCACCTCCAATTCCCCACTCGCAATGATGAAGTTCCTGCGCCGAACCTCTCACCGCAAGCCACAGCTTCTGCGAGCACAACTCAGGTTGGGACTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGCTGCGGTGGATAATTCTAGAAAGTGTAGAGCCCCTACGCCGGCAGCAAGAAAGGATGTGCCAGCAACAAGAGTTGTTGCGCAAGCAACAAGACGAACTGTCGCAGTGGGTAAATGCTTTAGTCCTTTTTCTAATGCCATGGACTGAAGGTTTTGGCCGCTTGCCAGTCACGCCAAACTTGTTTGCACGACCTGCTGGGCAACAAAGACCCCCTAGCGCAGGCCCATCACAAGTACGCGGATCCATGCCTCCGCCTGCGCCGAGGGAGACAAGACCACCTCCACCACCACCACCGCAGGAGTAG MSDSQNLSVSGYADDASPSSSEVEGPLRDAISSLSEENENQTEGKPSQDSMETEENEVINVEQTPMAEPSISTANPSEVLNIAPLNTSTFTVQPVTLQPAQNISIPRNLTPFPSPFPLVPLLLPPPDSSASLASTTNPSSSSSSPANTSHPPSTSAQPTSSQFYEWEVAAWNSLMGELGEEGEAIHLREEQEKAAAEETACKAAADEKAAKEKEGSSKPAAVPNKKRKAPTASKSKGKEKVGAGKEKVGEEWGKFHEKRVAFSFAHINNVFELRDIPNAEGNALLDYLDDDLLSAVLLAVARPGGKWDGHGTARTLKLQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQTTAKPKGAMFCLGLVTRLCRASGLVPATDEEIRPMRKDFDDQWWVRVTSTRDRRLQGSTQQPAPASQPTEPTALAPEKPKKKRRKQTVGRKALSAPNLRDPCHHSKKACHRHLRHRHLQFPTRNDEVPAPNLSPQATASASTTQVGTDLLIDVDSALIFSELRWIILESVEPLRRQQERMCQQQELLRKQQDELSQWVNALVLFLMPWTEGFGRLPVTPNLFARPAGQQRPPSAGPSQVRGSMPPPAPRETRPPPPPPPQE Homology
BLAST of Spg023410 vs. NCBI nr
Match: KAE8661093.1 (hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]) HSP 1 Score: 81.6 bits (200), Expect = 2.6e-11 Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 0
BLAST of Spg023410 vs. NCBI nr
Match: MCH80834.1 (hypothetical protein [Trifolium medium]) HSP 1 Score: 81.6 bits (200), Expect = 2.6e-11 Identity = 46/152 (30.26%), Postives = 84/152 (55.26%), Query Frame = 0
BLAST of Spg023410 vs. NCBI nr
Match: XP_024995361.1 (formin-like protein 3 [Cynara cardunculus var. scolymus]) HSP 1 Score: 80.5 bits (197), Expect = 5.8e-11 Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 0
BLAST of Spg023410 vs. NCBI nr
Match: KAE8718449.1 (hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]) HSP 1 Score: 78.6 bits (192), Expect = 2.2e-10 Identity = 44/153 (28.76%), Postives = 85/153 (55.56%), Query Frame = 0
BLAST of Spg023410 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 76.3 bits (186), Expect = 1.1e-09 Identity = 65/208 (31.25%), Postives = 100/208 (48.08%), Query Frame = 0
BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A6A2WM54 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilonHSYRG00213 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-11 Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 0
BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A392M2J7 (Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001608 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-11 Identity = 46/152 (30.26%), Postives = 84/152 (55.26%), Query Frame = 0
BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A6A3BU96 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilonHSYRG00240 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-10 Identity = 44/153 (28.76%), Postives = 85/153 (55.56%), Query Frame = 0
BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A6A3ASF6 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110378pilonHSYRG00039 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-09 Identity = 43/153 (28.10%), Postives = 84/153 (54.90%), Query Frame = 0
BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A6A2YMQ9 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111372pilonHSYRG00020 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.4e-09 Identity = 42/152 (27.63%), Postives = 82/152 (53.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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