Spg023410 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023410
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Locationscaffold13: 11451641 .. 11453949 (-)
RNA-Seq ExpressionSpg023410
SyntenySpg023410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGATTCCCAAAACCTCTCAGTGTCTGGCTATGCGGATGATGCCTCCCCTTCATCGTCGGAGGTGGAAGGACCTCTCCGAGACGCCATTTCCTCCCTTAGTGAGGAAAATGAGAACCAAACCGAGGGAAAGCCAAGCCAAGACTCCATGGAAACAGAGGAGAATGAGGTCATCAACGTCGAGCAAACTCCCATGGCCGAACCTTCCATCTCCACAGCCAACCCTTCAGAGGTGCTCAATATTGCACCTCTGAACACTTCTACCTTCACCGTCCAACCCGTCACCCTCCAACCTGCCCAAAACATCTCCATCCCTCGAAACCTAACCCCATTTCCATCCCCATTCCCTTTGGTACCCCTCCTTCTTCCACCCCCAGATTCTTCAGCTTCTCTCGCATCAACCACCAACCCTTCATCTTCTTCCTCTTCGCCCGCAAACACTTCCCACCCACCATCCACCTCAGCGCAACCCACTTCGTCGCAGTTTTATGAGTGGGAAGTGGCCGCATGGAACTCCTTGATGGGAGAATTAGGCGAGGAAGGCGAAGCAATTCATCTGCGAGAAGAACAAGAAAAGGCTGCCGCAGAGGAAACCGCATGCAAGGCAGCCGCAGATGAAAAAGCAGCCAAAGAAAAAGAGGGCTCCAGCAAGTAGGCGAAAGATCCGGTCGCCGCAGAAGTTGCCGCATCCAACTTAGCAATCATTGCGGCAGCTCTAGACGTGGAAGCTTCTAATTCCGAGGATGAGCTCCCCCTAACTCCTTGCCGCAACATCCAGTCCACGGGGGTAATCATCCGAGAACCCTCTGAAAGACCTGCGGCAGTCCCAAACAAGAAACGGAAAGCGCCCACCGCATCCAAAAGCAAAGGAAAAGAAAAAGTGGGCGCAGGAAAAGAAAAAGTGGGCGAGGAATGGGGGAAGTTCCATGAAAAACGAGGTTTCAGCTGCACCCTCCGGCCAACGATGACCGAGTAGATCTCCCAGCGCAAATGGGAAATCGTTTGCCAAAACCCTCGCAACTATGCCCCTGCGTTAGTCCACGACTTCTACCCGACGCAGTGGTAAGAAGAAGTCGACGAAGTTTTAGTGAGACGTCACGCAGTCGCATTCTCCTTCGCACACATCAACAATGTATTCGAGCTGCGAGACATCCCAAATGCAGAAGGGAATGCGCTCCTCGACTATCTCGACGATGACTTACTGAGCGCAGTACTTCTTGCGGTGGCCCGACCTGGAGGCAAATGGGACGGCCACGGCACTGCGAGGACCCTGAAGTTGCAGCTGCTCGACTTCGAGGCCAATTGGTGGATGCATTGGGTGAAGAATCGCATCATGCTCACAACGCATGATGCCACATTGAGCCTCCAACGGGTAATTCTGGTTTATTGCATCATGAAGGGAACCCCAATCGACTTGGGCCAAATCCTCGTCAAAACATTGAGTCAGACTACCGCAAAACCTAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACTCGGTTATGTCGCGCATCTGGCCTCGTGCCCGCAACAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGTGCGCGTAACCAGCACCCGCGATAGGCGTTTGCAAGGAAGCACGCAGCAACCAGCTCCCGCATCCCAACCCACCGAACCTACAGCTCTTGCGCCTGAGAAGCCAAAGAAAAAAAGGCGCAAGCAAACTGTGGGCAGGAAAGCACTGTCTGCACCCAACCTCAGGGATCCTTGCCACCACAGCAAGAAAGCTTGCCACCGCCACCTCCGCCACCGCCACCTCCAATTGTCCAAAGCACACCTCCTCCGCAGCACAACAATGACTTGCGAACAGAGGAGATTTTTGAAGACTCATTGTCGAGCCCCACTCGCAATGATGAAGTTCCTGCGCCGAACCTCTCACCGCAAGCCACAGCTTCTGCGAGCACAACTCAGGTTGGGACTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGCTGCGGTGGATAATTCTAGAAAGTGTAGAGCCCCTACGCCGGCAGCAAGAAAGGATGTGCCAGCAACAAGAGTTGTTGCGCAAGCAACAAGACGAACTGTCGCAGTGGGTAAATGCTTTAGTCCTTTTTCTAATGCCATGGACTGAAGGTTTTGGCCGCTTGCCAGTCACGCCAAACTTGTTTGCACGACCTGCTGGGCAACAAAGACCCCCTAGCGCAGGCCCATCACAAGTACGCGGATCCATGCCTCCGCCTGCGCCGAGGGAGACAAGACCACCTCCACCACCACCACCGCAGGAGTAG

mRNA sequence

ATGTCCGATTCCCAAAACCTCTCAGTGTCTGGCTATGCGGATGATGCCTCCCCTTCATCGTCGGAGGTGGAAGGACCTCTCCGAGACGCCATTTCCTCCCTTAGTGAGGAAAATGAGAACCAAACCGAGGGAAAGCCAAGCCAAGACTCCATGGAAACAGAGGAGAATGAGGTCATCAACGTCGAGCAAACTCCCATGGCCGAACCTTCCATCTCCACAGCCAACCCTTCAGAGGTGCTCAATATTGCACCTCTGAACACTTCTACCTTCACCGTCCAACCCGTCACCCTCCAACCTGCCCAAAACATCTCCATCCCTCGAAACCTAACCCCATTTCCATCCCCATTCCCTTTGGTACCCCTCCTTCTTCCACCCCCAGATTCTTCAGCTTCTCTCGCATCAACCACCAACCCTTCATCTTCTTCCTCTTCGCCCGCAAACACTTCCCACCCACCATCCACCTCAGCGCAACCCACTTCGTCGCAGTTTTATGAGTGGGAAGTGGCCGCATGGAACTCCTTGATGGGAGAATTAGGCGAGGAAGGCGAAGCAATTCATCTGCGAGAAGAACAAGAAAAGGCTGCCGCAGAGGAAACCGCATGCAAGGCAGCCGCAGATGAAAAAGCAGCCAAAGAAAAAGAGGGCTCCAGCAAACCTGCGGCAGTCCCAAACAAGAAACGGAAAGCGCCCACCGCATCCAAAAGCAAAGGAAAAGAAAAAGTGGGCGCAGGAAAAGAAAAAGTGGGCGAGGAATGGGGGAAGTTCCATGAAAAACGAGTCGCATTCTCCTTCGCACACATCAACAATGTATTCGAGCTGCGAGACATCCCAAATGCAGAAGGGAATGCGCTCCTCGACTATCTCGACGATGACTTACTGAGCGCAGTACTTCTTGCGGTGGCCCGACCTGGAGGCAAATGGGACGGCCACGGCACTGCGAGGACCCTGAAGTTGCAGCTGCTCGACTTCGAGGCCAATTGGTGGATGCATTGGGTGAAGAATCGCATCATGCTCACAACGCATGATGCCACATTGAGCCTCCAACGGGTAATTCTGGTTTATTGCATCATGAAGGGAACCCCAATCGACTTGGGCCAAATCCTCGTCAAAACATTGAGTCAGACTACCGCAAAACCTAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACTCGGTTATGTCGCGCATCTGGCCTCGTGCCCGCAACAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGTGCGCGTAACCAGCACCCGCGATAGGCGTTTGCAAGGAAGCACGCAGCAACCAGCTCCCGCATCCCAACCCACCGAACCTACAGCTCTTGCGCCTGAGAAGCCAAAGAAAAAAAGGCGCAAGCAAACTGTGGGCAGGAAAGCACTGTCTGCACCCAACCTCAGGGATCCTTGCCACCACAGCAAGAAAGCTTGCCACCGCCACCTCCGCCACCGCCACCTCCAATTCCCCACTCGCAATGATGAAGTTCCTGCGCCGAACCTCTCACCGCAAGCCACAGCTTCTGCGAGCACAACTCAGGTTGGGACTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGCTGCGGTGGATAATTCTAGAAAGTGTAGAGCCCCTACGCCGGCAGCAAGAAAGGATGTGCCAGCAACAAGAGTTGTTGCGCAAGCAACAAGACGAACTGTCGCAGTGGGTAAATGCTTTAGTCCTTTTTCTAATGCCATGGACTGAAGGTTTTGGCCGCTTGCCAGTCACGCCAAACTTGTTTGCACGACCTGCTGGGCAACAAAGACCCCCTAGCGCAGGCCCATCACAAGTACGCGGATCCATGCCTCCGCCTGCGCCGAGGGAGACAAGACCACCTCCACCACCACCACCGCAGGAGTAG

Coding sequence (CDS)

ATGTCCGATTCCCAAAACCTCTCAGTGTCTGGCTATGCGGATGATGCCTCCCCTTCATCGTCGGAGGTGGAAGGACCTCTCCGAGACGCCATTTCCTCCCTTAGTGAGGAAAATGAGAACCAAACCGAGGGAAAGCCAAGCCAAGACTCCATGGAAACAGAGGAGAATGAGGTCATCAACGTCGAGCAAACTCCCATGGCCGAACCTTCCATCTCCACAGCCAACCCTTCAGAGGTGCTCAATATTGCACCTCTGAACACTTCTACCTTCACCGTCCAACCCGTCACCCTCCAACCTGCCCAAAACATCTCCATCCCTCGAAACCTAACCCCATTTCCATCCCCATTCCCTTTGGTACCCCTCCTTCTTCCACCCCCAGATTCTTCAGCTTCTCTCGCATCAACCACCAACCCTTCATCTTCTTCCTCTTCGCCCGCAAACACTTCCCACCCACCATCCACCTCAGCGCAACCCACTTCGTCGCAGTTTTATGAGTGGGAAGTGGCCGCATGGAACTCCTTGATGGGAGAATTAGGCGAGGAAGGCGAAGCAATTCATCTGCGAGAAGAACAAGAAAAGGCTGCCGCAGAGGAAACCGCATGCAAGGCAGCCGCAGATGAAAAAGCAGCCAAAGAAAAAGAGGGCTCCAGCAAACCTGCGGCAGTCCCAAACAAGAAACGGAAAGCGCCCACCGCATCCAAAAGCAAAGGAAAAGAAAAAGTGGGCGCAGGAAAAGAAAAAGTGGGCGAGGAATGGGGGAAGTTCCATGAAAAACGAGTCGCATTCTCCTTCGCACACATCAACAATGTATTCGAGCTGCGAGACATCCCAAATGCAGAAGGGAATGCGCTCCTCGACTATCTCGACGATGACTTACTGAGCGCAGTACTTCTTGCGGTGGCCCGACCTGGAGGCAAATGGGACGGCCACGGCACTGCGAGGACCCTGAAGTTGCAGCTGCTCGACTTCGAGGCCAATTGGTGGATGCATTGGGTGAAGAATCGCATCATGCTCACAACGCATGATGCCACATTGAGCCTCCAACGGGTAATTCTGGTTTATTGCATCATGAAGGGAACCCCAATCGACTTGGGCCAAATCCTCGTCAAAACATTGAGTCAGACTACCGCAAAACCTAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACTCGGTTATGTCGCGCATCTGGCCTCGTGCCCGCAACAGATGAAGAAATCCGACCCATGCGGAAGGATTTTGACGACCAATGGTGGGTGCGCGTAACCAGCACCCGCGATAGGCGTTTGCAAGGAAGCACGCAGCAACCAGCTCCCGCATCCCAACCCACCGAACCTACAGCTCTTGCGCCTGAGAAGCCAAAGAAAAAAAGGCGCAAGCAAACTGTGGGCAGGAAAGCACTGTCTGCACCCAACCTCAGGGATCCTTGCCACCACAGCAAGAAAGCTTGCCACCGCCACCTCCGCCACCGCCACCTCCAATTCCCCACTCGCAATGATGAAGTTCCTGCGCCGAACCTCTCACCGCAAGCCACAGCTTCTGCGAGCACAACTCAGGTTGGGACTGATCTACTGATTGATGTGGATTCAGCCCTTATCTTTTCAGAGCTGCGGTGGATAATTCTAGAAAGTGTAGAGCCCCTACGCCGGCAGCAAGAAAGGATGTGCCAGCAACAAGAGTTGTTGCGCAAGCAACAAGACGAACTGTCGCAGTGGGTAAATGCTTTAGTCCTTTTTCTAATGCCATGGACTGAAGGTTTTGGCCGCTTGCCAGTCACGCCAAACTTGTTTGCACGACCTGCTGGGCAACAAAGACCCCCTAGCGCAGGCCCATCACAAGTACGCGGATCCATGCCTCCGCCTGCGCCGAGGGAGACAAGACCACCTCCACCACCACCACCGCAGGAGTAG

Protein sequence

MSDSQNLSVSGYADDASPSSSEVEGPLRDAISSLSEENENQTEGKPSQDSMETEENEVINVEQTPMAEPSISTANPSEVLNIAPLNTSTFTVQPVTLQPAQNISIPRNLTPFPSPFPLVPLLLPPPDSSASLASTTNPSSSSSSPANTSHPPSTSAQPTSSQFYEWEVAAWNSLMGELGEEGEAIHLREEQEKAAAEETACKAAADEKAAKEKEGSSKPAAVPNKKRKAPTASKSKGKEKVGAGKEKVGEEWGKFHEKRVAFSFAHINNVFELRDIPNAEGNALLDYLDDDLLSAVLLAVARPGGKWDGHGTARTLKLQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQTTAKPKGAMFCLGLVTRLCRASGLVPATDEEIRPMRKDFDDQWWVRVTSTRDRRLQGSTQQPAPASQPTEPTALAPEKPKKKRRKQTVGRKALSAPNLRDPCHHSKKACHRHLRHRHLQFPTRNDEVPAPNLSPQATASASTTQVGTDLLIDVDSALIFSELRWIILESVEPLRRQQERMCQQQELLRKQQDELSQWVNALVLFLMPWTEGFGRLPVTPNLFARPAGQQRPPSAGPSQVRGSMPPPAPRETRPPPPPPPQE
Homology
BLAST of Spg023410 vs. NCBI nr
Match: KAE8661093.1 (hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus])

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-11
Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 0

Query: 258 KRVAFSFAHINNVFELRDIPNAEGNALLDYLDDDLLSAVLLAVARPGGKWDGHGTAR-TL 317
           K++ F+   IN+ F L+D+ +       +  D +    VL  +     +W+G  T+R ++
Sbjct: 98  KKIRFTSTAINHYFHLQDVVDNHA-TFEEEADSNKYDGVLEDLCFENTEWNGRQTSRYSV 157

Query: 318 KLQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQTT 377
             + L   A  W H++KN++M T+H+ T+SL R++L++ IM   PID+G I+V+ +    
Sbjct: 158 NRERLQPRAKLWNHFLKNKLMPTSHNTTVSLSRLLLLHSIMVSRPIDVGCIIVQQVHDCL 217

Query: 378 AKPKGAMFCLGLVTRLCRASGLVPATDEEIRP 409
            K   A+    L+T LCR   +     +EI P
Sbjct: 218 GKKASALVFPNLITTLCRKKKVEENAFDEILP 248

BLAST of Spg023410 vs. NCBI nr
Match: MCH80834.1 (hypothetical protein [Trifolium medium])

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-11
Identity = 46/152 (30.26%), Postives = 84/152 (55.26%), Query Frame = 0

Query: 260 VAFSFAHINNVFELRDIPNAEGNALLDYLDDDLLSAVLLAVARPGGKWDGHGTAR--TLK 319
           + +S A+INN + L+     E   L+D + D+ L+AV+  +  PG +W          +K
Sbjct: 109 ILYSAANINNHYGLK-ADEDEYQTLMDNISDEELTAVMRNLTEPGTEWSMKNNVNEWCIK 168

Query: 320 LQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQTTA 379
              L  E   W   +K+ I+ TTH+ T++  R++L++CIM+  PI++G+I+ + +   + 
Sbjct: 169 RMSLKPEVRVWYQLLKHTILPTTHNETVNKARIVLLHCIMEEIPINVGRIICQEIGSCST 228

Query: 380 KPKGAMFCLGLVTRLCRASGLVP-ATDEEIRP 409
           + +G ++   L+T LC+A  +   ATDE   P
Sbjct: 229 RLEGMLYFPCLITALCKAVKVEEFATDEAFPP 259

BLAST of Spg023410 vs. NCBI nr
Match: XP_024995361.1 (formin-like protein 3 [Cynara cardunculus var. scolymus])

HSP 1 Score: 80.5 bits (197), Expect = 5.8e-11
Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 0

Query: 260 VAFSFAHINNVFELRDIPNAEGNALLDYLDDDLLSAVLLAVARPGGKWDGHGTARTLKLQ 319
           V++S   IN++ EL     ++ + L     D+ L  +L  VA  G  W   G AR LK Q
Sbjct: 371 VSYSPNAINDLLELIPPSYSKLDRLTAGCTDEELDLILAKVANEGVVWSFKGRARLLKTQ 430

Query: 320 LLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQTTAKP 379
            L  EAN W +++++ I   +HD  L L+RV+++YCI++  P D+G+++   +     + 
Sbjct: 431 YLKPEANIWCYFMRHTIHPMSHDTNLCLERVLILYCILEARPFDVGRMICSNIKACVERT 490

Query: 380 KGAMFCLGLVTRLCRASGLVPATDEEIRPMRKDFDDQWWVRVTSTRDRRLQGSTQQPAPA 439
            G +    L+ RL + + ++ A  +++  M K   D    +    R  R+  + Q  AP 
Sbjct: 491 NGKLLYPSLIHRLMQKAQVL-ALPKDVMSMEKTSID----KKNLDRLMRVNANVQPDAPT 546

Query: 440 S 441
           S
Sbjct: 551 S 546

BLAST of Spg023410 vs. NCBI nr
Match: KAE8718449.1 (hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus])

HSP 1 Score: 78.6 bits (192), Expect = 2.2e-10
Identity = 44/153 (28.76%), Postives = 85/153 (55.56%), Query Frame = 0

Query: 258 KRVAFSFAHINNVFELRDIPNAEGNALL-DYLDDDLLSAVLLAVARPGGKWDGHGTAR-T 317
           K++ F+   IN  F L+++   +G+A+  +  D +    VL  +     +W+G  T+R +
Sbjct: 98  KQIRFTSIAINRYFHLQEV--VDGHAMFEEEADSNKYDGVLEDLCFENTEWNGRQTSRYS 157

Query: 318 LKLQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQT 377
           +  + L   A  W H++K+++M T+H+ T+SL R++L++ ++   PID+G+I+V+ +   
Sbjct: 158 VNRERLQPRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSMIVSRPIDVGRIIVQQVHDC 217

Query: 378 TAKPKGAMFCLGLVTRLCRASGLVPATDEEIRP 409
             K   A+    L+T LCR   +     +EI P
Sbjct: 218 LGKKASALVFPNLITALCRKKKVEENAFDEILP 248

BLAST of Spg023410 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida])

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-09
Identity = 65/208 (31.25%), Postives = 100/208 (48.08%), Query Frame = 0

Query: 180 EEGEAIHLREEQEKAAAEETAC--KAAADEKAAKEKEGSSKPAAVPNKKRKAPTASKSKG 239
           +E E   L+EE+EK       C  K    E A +EKE   K      ++      +K KG
Sbjct: 205 KEEEERRLKEEKEKKCEANRRCLQKKKGKELAEREKEEQRKEREKKQRQAARLALAKEKG 264

Query: 240 K--EKVGAGKEKVGEEW-GKFHEKR---------VAFSFAHINNVFELRDIPNAEGNALL 299
           K  EK       V + + G+ H  R         V+FS   IN +++++D P A GN ++
Sbjct: 265 KSIEKSSKPASVVRDFYRGRLHGTRDAVTLKRETVSFSARDINEIYQMKDNPYASGNKII 324

Query: 300 DYLDDDLLSAVLLAVARPGGKWD-GHGTARTLKLQLLDFEANWWMHWVKNRIMLTTHDAT 359
           D   +  +   L  + + G KW        TL  + L  E   W++ VK R++ TTHD T
Sbjct: 325 DDPTEQQMEDALQVLMQLGMKWSVSLKGVSTLASKSLLLEGRLWVYLVKKRLISTTHDKT 384

Query: 360 LSLQRVILVYCIMKGTPIDLGQILVKTL 373
           +S  RV+  YCI++  PID+GQ++ + L
Sbjct: 385 VSRDRVMATYCIVRSIPIDVGQLIARQL 412

BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A6A2WM54 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilonHSYRG00213 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-11
Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 0

Query: 258 KRVAFSFAHINNVFELRDIPNAEGNALLDYLDDDLLSAVLLAVARPGGKWDGHGTAR-TL 317
           K++ F+   IN+ F L+D+ +       +  D +    VL  +     +W+G  T+R ++
Sbjct: 98  KKIRFTSTAINHYFHLQDVVDNHA-TFEEEADSNKYDGVLEDLCFENTEWNGRQTSRYSV 157

Query: 318 KLQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQTT 377
             + L   A  W H++KN++M T+H+ T+SL R++L++ IM   PID+G I+V+ +    
Sbjct: 158 NRERLQPRAKLWNHFLKNKLMPTSHNTTVSLSRLLLLHSIMVSRPIDVGCIIVQQVHDCL 217

Query: 378 AKPKGAMFCLGLVTRLCRASGLVPATDEEIRP 409
            K   A+    L+T LCR   +     +EI P
Sbjct: 218 GKKASALVFPNLITTLCRKKKVEENAFDEILP 248

BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A392M2J7 (Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001608 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-11
Identity = 46/152 (30.26%), Postives = 84/152 (55.26%), Query Frame = 0

Query: 260 VAFSFAHINNVFELRDIPNAEGNALLDYLDDDLLSAVLLAVARPGGKWDGHGTAR--TLK 319
           + +S A+INN + L+     E   L+D + D+ L+AV+  +  PG +W          +K
Sbjct: 109 ILYSAANINNHYGLK-ADEDEYQTLMDNISDEELTAVMRNLTEPGTEWSMKNNVNEWCIK 168

Query: 320 LQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQTTA 379
              L  E   W   +K+ I+ TTH+ T++  R++L++CIM+  PI++G+I+ + +   + 
Sbjct: 169 RMSLKPEVRVWYQLLKHTILPTTHNETVNKARIVLLHCIMEEIPINVGRIICQEIGSCST 228

Query: 380 KPKGAMFCLGLVTRLCRASGLVP-ATDEEIRP 409
           + +G ++   L+T LC+A  +   ATDE   P
Sbjct: 229 RLEGMLYFPCLITALCKAVKVEEFATDEAFPP 259

BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A6A3BU96 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilonHSYRG00240 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-10
Identity = 44/153 (28.76%), Postives = 85/153 (55.56%), Query Frame = 0

Query: 258 KRVAFSFAHINNVFELRDIPNAEGNALL-DYLDDDLLSAVLLAVARPGGKWDGHGTAR-T 317
           K++ F+   IN  F L+++   +G+A+  +  D +    VL  +     +W+G  T+R +
Sbjct: 98  KQIRFTSIAINRYFHLQEV--VDGHAMFEEEADSNKYDGVLEDLCFENTEWNGRQTSRYS 157

Query: 318 LKLQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQT 377
           +  + L   A  W H++K+++M T+H+ T+SL R++L++ ++   PID+G+I+V+ +   
Sbjct: 158 VNRERLQPRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSMIVSRPIDVGRIIVQQVHDC 217

Query: 378 TAKPKGAMFCLGLVTRLCRASGLVPATDEEIRP 409
             K   A+    L+T LCR   +     +EI P
Sbjct: 218 LGKKASALVFPNLITALCRKKKVEENAFDEILP 248

BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A6A3ASF6 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110378pilonHSYRG00039 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-09
Identity = 43/153 (28.10%), Postives = 84/153 (54.90%), Query Frame = 0

Query: 258 KRVAFSFAHINNVFELRDIPNAEGNALL-DYLDDDLLSAVLLAVARPGGKWDGHGTAR-T 317
           K++ F+   IN  F L+++   +G+A+L +  D +    VL  +     +W+G  T+R +
Sbjct: 93  KQIHFTSTAINCYFHLQEV--VDGHAMLEEEADSNTYDGVLEDLCFENTEWNGRQTSRYS 152

Query: 318 LKLQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQT 377
           +  + L   A  W H++K+++M T+H+  +SL R++L++ ++   PID+G+I+V+ +   
Sbjct: 153 VNRERLQPRAKLWNHFLKHKLMPTSHNTIVSLSRLLLLHSMIVSRPIDVGRIIVQQVHDC 212

Query: 378 TAKPKGAMFCLGLVTRLCRASGLVPATDEEIRP 409
             K   A+    L+T LC    +     +EI P
Sbjct: 213 LGKKASALVFPNLITALCHKKKVEENAFDEILP 243

BLAST of Spg023410 vs. ExPASy TrEMBL
Match: A0A6A2YMQ9 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111372pilonHSYRG00020 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-09
Identity = 42/152 (27.63%), Postives = 82/152 (53.95%), Query Frame = 0

Query: 258 KRVAFSFAHINNVFELRDIPNAEGNALLDYLDDDLLSAVLLAVARPGGKWDGHGTAR-TL 317
           K++ F+ + I   F L+D+ +       +  D +    VL  +     +W+G  T+R ++
Sbjct: 98  KQIHFTPSAIIRYFHLQDVVDNHAK-FEEEADSNTYDRVLEDLCFENTEWNGRQTSRYSV 157

Query: 318 KLQLLDFEANWWMHWVKNRIMLTTHDATLSLQRVILVYCIMKGTPIDLGQILVKTLSQTT 377
             + L   A  W H++K+++M T+++ T+SL R++L++ I +  PID+G+I+V+ ++   
Sbjct: 158 NRERLQPRAKLWNHFLKHKLMPTSYNTTVSLSRLLLLHSIKESCPIDVGRIIVQQVNDCL 217

Query: 378 AKPKGAMFCLGLVTRLCRASGLVPATDEEIRP 409
            K   A+    L+T LCR   +     +EI P
Sbjct: 218 GKKASALVFPNLITALCRKKKVKENAFDEILP 248

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8661093.12.6e-1130.26hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus][more]
MCH80834.12.6e-1130.26hypothetical protein [Trifolium medium][more]
XP_024995361.15.8e-1128.73formin-like protein 3 [Cynara cardunculus var. scolymus][more]
KAE8718449.12.2e-1028.76hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus][more]
XP_038876674.11.1e-0931.25chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6A2WM541.3e-1130.26Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilon... [more]
A0A392M2J71.3e-1130.26Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001608... [more]
A0A6A3BU961.1e-1028.76Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilon... [more]
A0A6A3ASF61.2e-0928.10Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110378pilon... [more]
A0A6A2YMQ93.4e-0927.63Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111372pilon... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..635

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023410.1Spg023410.1mRNA