Spg023407 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023407
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribosomal protein L34e superfamily protein
Location	scaffold13: 2511848 .. 2516188 (-)
RNA-Seq Expression	Spg023407
Synteny	Spg023407

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCACTTCGCTAACATGCGCCATCCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTTTTTTTTTACAGTTAGATCCCTAATTTTGCCCTAACTGTAACCTCCATTATTGCGAAGCTCTCTCTATAACATGCGCAATCTTCTGGTTCCGACCACCGCTATGCCTCCGTCCTCAATTCTCACCTCCTCGTCGTCAATTTCCAAATCCAAGGCTTCTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCGGCAACCCTTGACCTTCTTATCCTCATTCTCGTTCTATTTTCTGGTACTTTTCTTGTAACGTCATACTTCTCTTACATTTTCAACTCTCTGTCGATTCTCTTGTCGCATTCGGCCCCGCAGCTCCCTCAATTTCCCTTTCCGTTTATTGTTGGGTTCTTGCTGTTTTTCTGTGTGACTATTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAGACGGAGGAGTGTGTCAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCCGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGAGTTTGTATTTTATTCGATACAGTGCCACTGAATCTTTTTTTTTTTTTTGGGTTTGGTTTTTGCTCTGATCATTCAAAGGCTTGTGATTCTGGAATTGGGTGCTACAGAAATTATTACGATCTCCTTCCCCCTAACAGAACCCCAAAACTTAGAATTGATAAAGGAAAAGGGTGTATCTGAACTTAGATAACATTTGTTTAAGACTTTTATGGCATTTATGGAACTTTTGAAAAACCTTAGGATCAAATTTAAGTTCAGAATTGGGGAGAAATTTCTTCCCTGCCTAATATTGCGGTTCTTATGAACAATTTTATGGGAGTGGGATTATGGAAGTTGAAGACTGTATTTTATTCAGATTGGTAGATCAAAATATATATTATACATGATCCTTTCTGTATCTTGATGTTTTTTTTTTAAAAAAATTGTTGAGTAGACCAATTCCCTTTTATTGGAATCAAAATTTTTATGCACTTACAGAGTGCATCATATTCCTGTACTGAATTATTGAAAGAAACCAATTCTATATCTATCCTTGCCACTTGGACTCGGGTTGATATTGTCAAGTATCTGTTTGTTTTCTTGAATTTTGACCTCTTTCTTCATGGAATTATAACTAATTCCTCGGGACCTGAGACTGAAGGTAGATGTTCGAAATTCAATTTTGTACCTTTTCTGTTGACTAATTTATAGATGCTGAACTCTGAATAATGTGACTGATGTGAGTTACAAGAGGGGCTTGTAGGTCTGGATTGTATTGATTTAGATTTTAACAAGTCTCAACTTTCCCTGTTTTGTTTCTGAGCTCATATGTTAATTCATACAGTGTTCATTTGGTATAATACGTATCTTCTGTTTTTCCCCCTCTTTGACATCTTTGTGTGTTAAGACTTTCGACAAATTGTAGAGTTTATGTAGACTTACTATGTATCTTGTTCTTGCTGATGCAATTGTAAAATTCTTTGGGTAGGTTTTACATTTATTAAAGTTAAGAGTCTAAAGTTAAAATAATAATAATAATGAAAACAATTATGGGTCTGCAGCATGTGAGGTTTATTTTCCTCTCGTTTTTTCCCCTTGTGTGTATCTCTTCTTTGCCCACATTTTTTTTTTTTTTTTTATCATGGAGATAGCACCTTGTTTCATGTTTTGATCTACTGAAGATGTTTACTTCTTTTTTACCCATTTTAAATGATGCAAGTTCTCCTCACTCTTGGGTCCACTCTTCAAATTAGTTAATTTATTTTTCAGTGGGAAGCTATGCAAGCAAGTTTCAGGGGCTCGGTTAGCATACCCCAAGTAATTTGTTTCTGGTGAGCAATCATTGGCTAGGTTGAAGAACTGATATTCTGTACTCCTAGCTACTAAGTACTAAATTTTATGCATTCATGGTGTTCTTCAGCTCTAATAGGTGCTTAATTTACTTAATGTTGCTAACTTTGTCCCAATTTTTCTTTAACTGTCATATATGTGATTTACCTTCTAGCAATATCTAATTGCTTTCATTGGACCCTTGCATTGGTATATGATGTATTTTTTTACCTCTTATCCAAGAGAGTATGTTATATCTTCATCTCTTACATAACCTTCATTAGTTTATTATTGTTGTTGTCGTCGTCCTCATTATTTGAAACTGAAAACATCATCATAAACAAAGAATGTGAGAGAACAGGCTAGGGGGCAGGGTAAAGAAAACCCCCTCCCAAAGGACTACAAAGTAAGAGCCTCCTAATTGCAAAAAAAAATTGTGATTGGATTTTGGAGCACCACCTGAGGGGTGAGCTATACACTACTGCGAATATATTCTGATGAAAACCCATCTTTCTTAAAAAAATCATTTGGTCTTCTCTTCTAAATTAGCCAAGGAAGTGCTCCTGCTAGACATTCCATAAAACCTTAGTAGCCTTGCTTTTAAACCTCCTCCTTTTAGGAACTTATTTTGGATTGTTATTTGACCTACACCGTGGTGCTGTAGCTTTATTTTGTTTCTGCAAAAACCATACAAATGGTGAATTTATTGTCTATGTTTCCAAATAATCAACCACTTGCACAAAATAATTAACCCTATTCATTGATCATGATGCTTTTGTTCAACTTTTATCACTGTTCTGTATATGCATGTAGCCTTTCTTTCCTGGCAACCTAATTATGCTAATCTAATTATATAGTTGTATGTTGGATGCTTGACGAGTGACATGACCTCCATCGTATTTTACTTTACTGTTTTCAGTGTCTCTAAACATGTGGAAGCATGAACATTACGTGCAGGATCTGTGGATTAGTAGTTTTGTCCTAATATCTGGTTAACCCCTCGTGGGGTAATGGATTGGGAAGACTGAACTATTCAATCCCAATCCTGGCACGTTACTTTCTAGCAACTACAGAACAAGCATCCATGGCTGTAGATTATAGTGTCAATCTTGTTTCAGCTTTTGTCCTGACGTCCTTCCACAAGCTCACGTCAAACTACATTAGATATGAACTCATGAATTTCATGTGAAGTTAAATCAAATATAAGTTCTTGGTTTCATAAAACAAACAATAGGGAATTATTCTGTCCCCGTCTAAATCAAGCACTCAAATCTTCAAAACATGTTTGTTCGTTAATTTGCAAGATTTTAAGAATGGTTTCCCTGGAAATTGTTTGCATCTGATGATATATATTTACAGGGATGGATTCAGCCTTACTTGAAACCTATAAGAACGTAACTGAATATTTCAGTCTTGAAAGTAAGATTTTCGAACTGTTATGGGTGTGTATCTAACCTGTAGTCCTCAGAAAGGTTCCAAATTCCTATTTCTGATGAACTGGGAAGCTTTTTAGCACATCTTACATTTACAATAAAGACCTTCATATTGCTTACTCAGTGTTGATTGTTAAAATTGCAACTGGTTTACAAGGGACTTCACTAGGACTGGAAAACATGTTCTCACTGATGAACAATCTCACATACTTCTTTCTTACCTTGTGATTTGGCCTATGAAATCCTTATGGTTTATTTTTGGATCACAATAGTAATCATCTCAATTCTGCCATTTATTTTGCAGGGCTCTGGCTACGCTGGGAATTACTGGGGGAGGAGACCATTGCTGATCATCAATGGCAACTTCGTTATCGATCGGGAGGACCTTCCATATATCTTACTTTCCCTTCCCATCATTTTACTTATTATTGGATGCTCTTTGTGAAACATATGAGAATGACTAGAGCTTTCTTTCATAAGAATACTATAACACAGTGATATTCATTGTCAGAAACAGGCTTCCCCCATCCCTGCTGCATTCTCCCTCGCCCATGGAAATGGAAATATACACCAAACTTACTGCAAATAAAACGATAGACAATGATATTTATGTCTCCTGGTCCATCTTGTTAGTGTAATGGGATATTTAACTTTCTGGGTTTGTTTCTCTTTTTTATATTTTACCTCTTTGGATTGGATCTATTTGGTTCTGCGAGACTTTTCTGAACACGTATATCATATGGGGTAAATCCACTTGTTCTTGTAATAGTCCACTGGCTCTTGTAAGTGTATTATAAACTTATAATCTTGATATGTATAGCTCACGTACTTGGATCTT

mRNA sequence

ATGCGCAATCTTCTGGTTCCGACCACCGCTATGCCTCCGTCCTCAATTCTCACCTCCTCGTCGTCAATTTCCAAATCCAAGGCTTCTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCGGCAACCCTTGACCTTCTTATCCTCATTCTCGTTCTATTTTCTGGTACTTTTCTTGTAACGTCATACTTCTCTTACATTTTCAACTCTCTGTCGATTCTCTTGTCGCATTCGGCCCCGCAGCTCCCTCAATTTCCCTTTCCGTTTATTGTTGGGTTCTTGCTGTTTTTCTGTGTGACTATTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAGACGGAGGAGTGTGTCAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCCGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGGACTTCACTAGGACTGGAAAACATGTTCTCACTGATGAACAATCTCACATACTTCTTTCTTACCTTGGCTCTGGCTACGCTGGGAATTACTGGGGGAGGAGACCATTGCTGATCATCAATGGCAACTTCGTTATCGATCGGGAGGACCTTCCATATATCTTACTTTCCCTTCCCATCATTTTACTTATTATTGGATGCTCTTTGTGA

Coding sequence (CDS)

ATGCGCAATCTTCTGGTTCCGACCACCGCTATGCCTCCGTCCTCAATTCTCACCTCCTCGTCGTCAATTTCCAAATCCAAGGCTTCTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCGGCAACCCTTGACCTTCTTATCCTCATTCTCGTTCTATTTTCTGGTACTTTTCTTGTAACGTCATACTTCTCTTACATTTTCAACTCTCTGTCGATTCTCTTGTCGCATTCGGCCCCGCAGCTCCCTCAATTTCCCTTTCCGTTTATTGTTGGGTTCTTGCTGTTTTTCTGTGTGACTATTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAGACGGAGGAGTGTGTCAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCCGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGGACTTCACTAGGACTGGAAAACATGTTCTCACTGATGAACAATCTCACATACTTCTTTCTTACCTTGGCTCTGGCTACGCTGGGAATTACTGGGGGAGGAGACCATTGCTGATCATCAATGGCAACTTCGTTATCGATCGGGAGGACCTTCCATATATCTTACTTTCCCTTCCCATCATTTTACTTATTATTGGATGCTCTTTGTGA

Protein sequence

MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKKDFTRTGKHVLTDEQSHILLSYLGSGYAGNYWGRRPLLIINGNFVIDREDLPYILLSLPIILLIIGCSL

Homology

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BLAST of Spg023407 vs. NCBI nr
Match: XP_038876271.1 (uncharacterized protein At5g19025-like isoform X2 [Benincasa hispida])

HSP 1 Score: 406.4 bits (1043), Expect = 2.0e-109
Identity = 206/216 (95.37%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILTSSSSISKSK S NPSPSNS LCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTSTNPSPSNSFLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFI  FLLFFCVTIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIAAFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKDFTRTG 217
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKK     G
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKALATLG 216

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BLAST of Spg023407 vs. NCBI nr
Match: XP_011657203.1 (uncharacterized protein At5g19025 isoform X2 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 3.4e-109
Identity = 206/216 (95.37%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSISKSK S NPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPF FI GFLLFFCVTIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKDFTRTG 217
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKK     G
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKALATLG 216

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BLAST of Spg023407 vs. NCBI nr
Match: KAG7013591.1 (hypothetical protein SDJN02_23758 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404.8 bits (1039), Expect = 5.9e-109
Identity = 215/263 (81.75%), Postives = 226/263 (85.93%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSI KSK SANP+PSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSIPKSKTSANPNPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQ PQFPFPFI GFLLFFCVTIG+FEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQRPQFPFPFIAGFLLFFCVTIGMFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVK+GSKEIDKLPWKGG+ ANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKNGSKEIDKLPWKGGNVANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKDFTRTGKHVLTDEQSHILLSY--------- 240
           RAVLLFRARCGCPIAKLEGWGTKRGRRHK      GK  L  + S   L+Y         
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHK-----NGK--LCKQVSGTRLAYPNNLQCCHF 240

Query: 241 -LGSGYAGNYWGRRPLLIINGNF 254
             GSG  G+  GRR  LI++ +F
Sbjct: 241 PQGSGNTGSQRGRRSSLIVDSDF 256

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BLAST of Spg023407 vs. NCBI nr
Match: XP_008458550.1 (PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis melo])

HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 205/216 (94.91%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSISKSK S NPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPF FI GFLLFFC TIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKDFTRTG 217
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKK     G
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKALATLG 216

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BLAST of Spg023407 vs. NCBI nr
Match: XP_038876270.1 (uncharacterized protein At5g19025-like isoform X1 [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 204/209 (97.61%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILTSSSSISKSK S NPSPSNS LCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTSTNPSPSNSFLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFI  FLLFFCVTIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIAAFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHK 210
           RAVLLFRARCGCPIAKLEGWGTKRGRRHK
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHK 209

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BLAST of Spg023407 vs. ExPASy Swiss-Prot
Match: P0C8Q9 (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 253.8 bits (647), Expect = 2.2e-66
Identity = 142/236 (60.17%), Postives = 165/236 (69.92%), Query Frame = 0


Query: 8   TTAMPPSSILTSSSSISKSKASANPSPSNSL-LCKHSPSATLDLLILILVLFSGTFLVTS 67
           +T MPPS           S+++AN + S+SL LCKHSPSATLDLLILILVLFSGTFL++S
Sbjct: 21  STTMPPS-----------SRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSS 80

Query: 68  YFSYIFNSLSILLSH----------SAPQLPQF---------------------PFPFIV 127
           YFSY+ +SLS+L SH            P L  F                     P  F  
Sbjct: 81  YFSYLIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFF 140

Query: 128 GFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGS-KEIDKLP 187
            F +FF  +I   ++CCG+RSRKC  P CKG+KKAMEFDLQLQTEECVKSGS KEID+LP
Sbjct: 141 AFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLP 200

Query: 188 WKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKK 211
           WKGGSE+NPDYECLR+ELRKMAP NGRAVL+FR++CGCPIAKLEGWG KR RRHKK
Sbjct: 201 WKGGSESNPDYECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

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BLAST of Spg023407 vs. ExPASy TrEMBL
Match: A0A1S3C8P6 (uncharacterized protein At5g19025 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497920 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 6.3e-109
Identity = 205/216 (94.91%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSISKSK S NPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPF FI GFLLFFC TIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKDFTRTG 217
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKK     G
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKKALATLG 216

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BLAST of Spg023407 vs. ExPASy TrEMBL
Match: A0A0A0KEK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G238650 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 204/209 (97.61%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSISKSK S NPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPF FI GFLLFFCVTIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHK 210
           RAVLLFRARCGCPIAKLEGWGTKRGRRHK
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHK 209

[Close]

BLAST of Spg023407 vs. ExPASy TrEMBL
Match: A0A6J1C956 (uncharacterized protein At5g19025-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009538 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.4e-108
Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MRNLLVPTT--AMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLF 60
           MRNLLVPTT  AMPP+SIL SSSSISKSK SANPSPSNSLLCKHSPSATLDLLILILVLF
Sbjct: 1   MRNLLVPTTAAAMPPTSILASSSSISKSKTSANPSPSNSLLCKHSPSATLDLLILILVLF 60

Query: 61  SGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRK 120
           SGTFLVTSYFSYIFNSLS+L SHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRK
Sbjct: 61  SGTFLVTSYFSYIFNSLSLLFSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRK 120

Query: 121 CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP 180
           CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP
Sbjct: 121 CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP 180

Query: 181 NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKK 211
           NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKK
Sbjct: 181 NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKK 212

[Close]

BLAST of Spg023407 vs. ExPASy TrEMBL
Match: A0A6J1H6R0 (uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC111460126 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 4.1e-108
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSI KSK SANP+PSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSIPKSKTSANPNPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFI GFLLFFCVTIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIAGFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVK+GSKEIDKLPWKGG+ ANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKNGSKEIDKLPWKGGNVANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKK 211
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKK
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKK 210

[Close]

BLAST of Spg023407 vs. ExPASy TrEMBL
Match: A0A1S3C841 (uncharacterized protein At5g19025 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497920 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 4.1e-108
Identity = 203/209 (97.13%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSISKSK S NPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPF FI GFLLFFC TIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHK 210
           RAVLLFRARCGCPIAKLEGWGTKRGRRHK
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHK 209

[Close]

BLAST of Spg023407 vs. TAIR 10
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 1.8e-71
Identity = 142/216 (65.74%), Postives = 166/216 (76.85%), Query Frame = 0


Query: 8   TTAMPPSSILTSSSSISKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSY 67
           T +MPPSS  ++S S S   +S++ S S+  LCKHSPSATLDLLILILVLFSG FL++SY
Sbjct: 15  TNSMPPSS--SASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSY 74

Query: 68  FSYIFNSLSILLSHSAPQLPQF------------PFPFIVGFLLFFCVTIGVFEICCGAR 127
           FSY+F+S S+L SH  P L               P  +   F +FF  +I   ++CCG R
Sbjct: 75  FSYLFHSFSLLSSH-FPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCCGPR 134

Query: 128 SRKCAKPGCKGLKKAMEFDLQLQTEECVKSG-SKEIDKLPWKGGSEANPDYECLRSELRK 187
           SRKC  P CKGLKKAMEFDLQLQTEECVKSG +KEID+LPWKGGSE+NPDYECLR+ELR+
Sbjct: 135 SRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYECLRAELRR 194

Query: 188 MAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKK 211
           MAPPNGRAVLLFR+RCGCP+AKLEGWG KRGRRHKK
Sbjct: 195 MAPPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKK 227

[Close]

BLAST of Spg023407 vs. TAIR 10
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 253.8 bits (647), Expect = 1.6e-67
Identity = 142/236 (60.17%), Postives = 165/236 (69.92%), Query Frame = 0


Query: 8   TTAMPPSSILTSSSSISKSKASANPSPSNSL-LCKHSPSATLDLLILILVLFSGTFLVTS 67
           +T MPPS           S+++AN + S+SL LCKHSPSATLDLLILILVLFSGTFL++S
Sbjct: 21  STTMPPS-----------SRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSS 80

Query: 68  YFSYIFNSLSILLSH----------SAPQLPQF---------------------PFPFIV 127
           YFSY+ +SLS+L SH            P L  F                     P  F  
Sbjct: 81  YFSYLIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFF 140

Query: 128 GFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGS-KEIDKLP 187
            F +FF  +I   ++CCG+RSRKC  P CKG+KKAMEFDLQLQTEECVKSGS KEID+LP
Sbjct: 141 AFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLP 200

Query: 188 WKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKK 211
           WKGGSE+NPDYECLR+ELRKMAP NGRAVL+FR++CGCPIAKLEGWG KR RRHKK
Sbjct: 201 WKGGSESNPDYECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

[Close]

BLAST of Spg023407 vs. TAIR 10
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 5.1e-26
Identity = 77/196 (39.29%), Postives = 115/196 (58.67%), Query Frame = 0


Query: 24  SKSKASANPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYI-------FNSLS 83
           +++K+S++P+ S   +C  S SA +D++ILI V+ +  FL   Y   I       F+ LS
Sbjct: 29  TRNKSSSSPTCSKFPVCDGSQSAAIDVVILIAVITACGFLFFPYVKLITLKSIEVFSDLS 88

Query: 84  ILLSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQ 143
           +L+     ++ Q P  +    L  FC  I  + +      ++C KP CKGL+KA+EFD+Q
Sbjct: 89  LLVKQ---EILQNPIVYGSLALSIFCAAISTWLVILLCTMQRCGKPNCKGLRKAVEFDIQ 148

Query: 144 LQTEECVKSGSKE--IDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPI 203
           L+TEECVKS S +  + +LP          +  L +EL+KMAPPNGRAVL+FRARCGC +
Sbjct: 149 LETEECVKSSSNKRGMFELP-------RVHHRELEAELKKMAPPNGRAVLVFRARCGCSV 208

Query: 204 AKLEGWGTKRGRRHKK 211
            +L   G K+ +R  K
Sbjct: 209 RRLVVSGPKKQQRKIK 214

[Close]

BLAST of Spg023407 vs. TAIR 10
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-24
Identity = 84/201 (41.79%), Postives = 118/201 (58.71%), Query Frame = 0


Query: 19  SSSSISKSKASANPSPSN-SLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY------- 78
           S +S S  K+S++   SN S+ C  S SA +D++ILI V+ S  FL+  Y  +       
Sbjct: 30  SRTSSSNRKSSSSSCSSNFSVCCDGSRSAAIDVVILIAVITSSGFLIFPYIKFITIKSVE 89

Query: 79  IFNSLSILLSHSAPQLPQFPFPFIVGF--LLFFCVTIGVFEICCGARSR-KCAKPGCKGL 138
           IF+ LS L+     ++ + P P + G   L   C  +  + I     SR +C KP CKGL
Sbjct: 90  IFSELSCLVKE---EILRNPDPIVYGLIALSISCTALSAWMIVILLCSRHRCGKPNCKGL 149

Query: 139 KKA-MEFDLQLQTEECVKSGS--KEIDKLPWKGGSEANPDYEC-LRSELRKMAPPNGRAV 198
           +KA  EFD+QL+TE+CVKS +  K + K   KG  E   D+   L +EL+KMAPPNGRAV
Sbjct: 150 RKANAEFDIQLETEDCVKSSNSGKSVSK---KGLFELPRDHHRELEAELKKMAPPNGRAV 209

Query: 199 LLFRARCGCPIAKLEGWGTKR 205
           L+FRA+CGC + +LE  G K+
Sbjct: 210 LVFRAKCGCSVGRLEVPGPKK 224

The following BLAST results are available for this feature:

BLAST of Spg023407 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876271.1	2.0e-109	95.37	uncharacterized protein At5g19025-like isoform X2 [Benincasa hispida]	[more]
XP_011657203.1	3.4e-109	95.37	uncharacterized protein At5g19025 isoform X2 [Cucumis sativus]	[more]
KAG7013591.1	5.9e-109	81.75	hypothetical protein SDJN02_23758 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008458550.1	1.3e-108	94.91	PREDICTED: uncharacterized protein At5g19025 isoform X2 [Cucumis melo]	[more]
XP_038876270.1	1.3e-108	97.61	uncharacterized protein At5g19025-like isoform X1 [Benincasa hispida]	[more]

BLAST of Spg023407 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q9	2.2e-66	60.17	Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 P...	[more]

BLAST of Spg023407 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8P6	6.3e-109	94.91	uncharacterized protein At5g19025 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0KEK4	1.1e-108	97.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G238650 PE=4 SV=1	[more]
A0A6J1C956	2.4e-108	96.70	uncharacterized protein At5g19025-like isoform X2 OS=Momordica charantia OX=3673...	[more]
A0A6J1H6R0	4.1e-108	96.19	uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A1S3C841	4.1e-108	97.13	uncharacterized protein At5g19025 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

BLAST of Spg023407 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06180.1	1.8e-71	65.74	Ribosomal protein L34e superfamily protein	[more]
AT5G19025.1	1.6e-67	60.17	Ribosomal protein L34e superfamily protein	[more]
AT3G01170.1	5.1e-26	39.29	Ribosomal protein L34e superfamily protein	[more]
AT5G15260.1	1.6e-24	41.79	Ribosomal protein L34e superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..36
None	No IPR available	PANTHER	PTHR47479:SF2	OS05G0393200 PROTEIN	coord: 1..214
IPR044196	Uncharacterized protein At5g19025-like	PANTHER	PTHR47479	OS05G0393200 PROTEIN	coord: 1..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023407.1	Spg023407.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane