Spg023403 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023403
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 10639627 .. 10640823 (-)
RNA-Seq Expression	Spg023403
Synteny	Spg023403

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAAGGTTTCCGAACCGTCAACTAACCCTTCTCTATCTTGTAGGATCAAGCTCGTTGTTACTTACTGTGCAAGAAAGAGGAGCACGAAGAAAAATGTGCCTGAAAAACCGCTTGAGGTCAAGCCCCTCAAAACCGCAAGGATGCCTCCGGACATATTCGAAGGAATAATTCGCCAAGTAGTGGAAAAGACTCTTGCGATTGCTGAAGGGTACAAAGCTGAACAGGATGCTTTGAAAGAGATTGAGGATGAGAGAAAGATGGAAAATCAGAAAATGATTGAGGAAGACGAGCTTGCAAAGGAAAGAGACCGTGAAGAAAAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCAGGGTATGAAGAAAACCTCAAGAGGGCAGCCATGGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAAATAAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGATTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGCTGAAGCACTGCAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAAATTTAGAAAAAGAAAAAGAAAGAGAAGTAGAGGAAGAAGGACAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCGAGGCCACCGTTGATAAGCCAGCTGAAGAGGTTTTTGAGCCTCTATTCACGAATGACCCACCAGCTACTGATAGCACCTCTTCGGGAGAGAAGAGGGACGAAGAGGAAAAAGAAGATGAGGAGGCCGAGACCTCCACTGACTCTGATACAGAATTCGATTTAGAGATAAGGGAGCTAGATGGCGACCAAGTCCATATCTCTACAGCGTTAAGAAGAAAGAGGAAGAGAGAGATTAAGGTTGAGAGGAGGACGAAGAACAAGAATGACCCAATATTTGCCAAGAGGTCGAGGACGAGGTCCATGGACGCCTGTCCTGCAGTTCCTCCTACTATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAGAAAGCCATTCCTTGAGGTATTTAGTGATGTTAATTTTCAGGAACGGATGGAGATCATGAAGAAGAGAGATTTTCTCAATGAAAAGGGATTCTCTAACAAAGCTGGAGCACTGCTAGAGTTCGTAACAAGAGTTATATTTCAGTAA

mRNA sequence

ATGGGTAAGGTTTCCGAACCGTCAACTAACCCTTCTCTATCTTGTAGGATCAAGCTCGTTGTTACTTACTGTGCAAGAAAGAGGAGCACGAAGAAAAATGTGCCTGAAAAACCGCTTGAGGTCAAGCCCCTCAAAACCGCAAGGATGCCTCCGGACATATTCGAAGGAATAATTCGCCAAGTAGTGGAAAAGACTCTTGCGATTGCTGAAGGGTACAAAGCTGAACAGGATGCTTTGAAAGAGATTGAGGATGAGAGAAAGATGGAAAATCAGAAAATGATTGAGGAAGACGAGCTTGCAAAGGAAAGAGACCGTGAAGAAAAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCAGGGTATGAAGAAAACCTCAAGAGGGCAGCCATGGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAAATAAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGATTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGCTGAAGCACTGCAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAAATTTAGAAAAAGAAAAAGAAAGAGAAGTAGAGGAAGAAGGACAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCGAGGCCACCGTTGATAAGCCAGCTGAAGAGGTTTTTGAGCCTCTATTCACGAATGACCCACCAGCTACTGATAGCACCTCTTCGGGAGAGAAGAGGGACGAAGAGGAAAAAGAAGATGAGGAGGCCGAGACCTCCACTGACTCTGATACAGAATTCGATTTAGAGATAAGGGAGCTAGATGGCGACCAAGTCCATATCTCTACAGCGTTAAGAAGAAAGAGGAAGAGAGAGATTAAGGTTGAGAGGAGGACGAAGAACAAGAATGACCCAATATTTGCCAAGAGGTCGAGGACGAGGTCCATGGACGCCTGTCCTGCAGTTCCTCCTACTATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAGAAAGCCATTCCTTGAGGTATTTAGTGATGTTAATTTTCAGGAACGGATGGAGATCATGAAGAAGAGAGATTTTCTCAATGAAAAGGGATTCTCTAACAAAGCTGGAGCACTGCTAGAGTTCGTAACAAGAGTTATATTTCAGTAA

Coding sequence (CDS)

ATGGGTAAGGTTTCCGAACCGTCAACTAACCCTTCTCTATCTTGTAGGATCAAGCTCGTTGTTACTTACTGTGCAAGAAAGAGGAGCACGAAGAAAAATGTGCCTGAAAAACCGCTTGAGGTCAAGCCCCTCAAAACCGCAAGGATGCCTCCGGACATATTCGAAGGAATAATTCGCCAAGTAGTGGAAAAGACTCTTGCGATTGCTGAAGGGTACAAAGCTGAACAGGATGCTTTGAAAGAGATTGAGGATGAGAGAAAGATGGAAAATCAGAAAATGATTGAGGAAGACGAGCTTGCAAAGGAAAGAGACCGTGAAGAAAAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCAGGGTATGAAGAAAACCTCAAGAGGGCAGCCATGGATTTGCAGCTCCTTGAGGAAGAGAAAAAGAGAAGAGAAGAAATAAAAGAAGATGAAAAAAGAAGAAAGGAAGCTGAAGATTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAAGCTGAAGCACTGCAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAAATTTAGAAAAAGAAAAAGAAAGAGAAGTAGAGGAAGAAGGACAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCGAGGCCACCGTTGATAAGCCAGCTGAAGAGGTTTTTGAGCCTCTATTCACGAATGACCCACCAGCTACTGATAGCACCTCTTCGGGAGAGAAGAGGGACGAAGAGGAAAAAGAAGATGAGGAGGCCGAGACCTCCACTGACTCTGATACAGAATTCGATTTAGAGATAAGGGAGCTAGATGGCGACCAAGTCCATATCTCTACAGCGTTAAGAAGAAAGAGGAAGAGAGAGATTAAGGTTGAGAGGAGGACGAAGAACAAGAATGACCCAATATTTGCCAAGAGGTCGAGGACGAGGTCCATGGACGCCTGTCCTGCAGTTCCTCCTACTATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAGAAAGCCATTCCTTGAGGTATTTAGTGATGTTAATTTTCAGGAACGGATGGAGATCATGAAGAAGAGAGATTTTCTCAATGAAAAGGGATTCTCTAACAAAGCTGGAGCACTGCTAGAGTTCGTAACAAGAGTTATATTTCAGTAA

Protein sequence

MGKVSEPSTNPSLSCRIKLVVTYCARKRSTKKNVPEKPLEVKPLKTARMPPDIFEGIIRQVVEKTLAIAEGYKAEQDALKEIEDERKMENQKMIEEDELAKERDREEKKRRREEEQEAERALEAGYEENLKRAAMDLQLLEEEKKRREEIKEDEKRRKEAEDFLAAFEPLHKAQSEAEALQGRVEEEAQQGPTEENLEKEKEREVEEEGQNATASGPHSEEGLAEATVDKPAEEVFEPLFTNDPPATDSTSSGEKRDEEEKEDEEAETSTDSDTEFDLEIRELDGDQVHISTALRRKRKREIKVERRTKNKNDPIFAKRSRTRSMDACPAVPPTISPAKPKGKSPKAASPRKPFLEVFSDVNFQERMEIMKKRDFLNEKGFSNKAGALLEFVTRVIFQ

Homology

The following BLAST results are available for this feature:

BLAST of Spg023403 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023403 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023403 vs.


Match Name	E-value	Identity	Description

BLAST of Spg023403 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	COILS	Coil	Coil	coord: 72..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023403.1	Spg023403.1	mRNA