Spg023377 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023377
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold13: 5538572 .. 5542936 (+)
RNA-Seq Expression	Spg023377
Synteny	Spg023377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGGGTCACGTAGGTTCAAGAGACTCGACTACGGGATGTGACTGCTCTGCAGATCGATCATTCATTCGAGATGTGACTGCAAATGGGATGTGACTGTTGCAGCATTCGGGAGGATGGGTGGAAAATTGAAATATGTTTTTATTTTTTTTTTTTTGGATAATTGTAATGGGTGGCAACATGAGGGTAAATAATGACAAATATAACAATTTTTAAAAATATTTGCAAATATGACAAAAAATTTTAATTAATTTTTTATATTTCCTGAATTGCCCCTGCATTGGCGCGTGCATCTTCTTCTTCCTCGTTAGTCGGTTTTTTTTTAAATTGAAATTTTCTATCACTGATAGAAAGTATTTCTATCACTGATAGATTCTATCCGTGGTAGAAAAATTTTCTATCACTGATAGAAAGTTCCTATCACTGATAGAAAGTTCCTATCACTGATAGAATAAAGTTTCTATCACTGATAGAAAGTCTTTCTATCACTGATAGATTCTATCAATGGTAGAAACATTTTCTATCAGTGATAGAAGATTTCTATCACTGATAGAAACTTTTTCTATCACTGATAGAATCTATCAGTGAAAGAAAAACTGATTGGCGCGTGCATCTTCTTCTTCCTCGTCAATTTATATATATATATTGATAGAAATCTTTTATGATAGAAAATTTTTCTACCACTGATAGATTCTATCAGTGGTAGAAAAAATTTCTATCATCTATCACTGATAGAAAATTTTTCTATCAGTGATGAACATTTTAGTAATTTTACTTTTCAGATGGTTTTTGCCATTTTTGCAAATATTTCTGCGGACTTCTACTTTTGCAATTAGTTTGGGCCATTTTGCTACTTTTGCAACCGGTCCTTTTTTTTTTGCAAGGGATGTGCATGGTTTAAAGTTTAAACCTACCGATTTTATTTTTAAATTTTTTGGGAAAAATTCATTTTTAACCCTGAATTTTGGGGTTGTATCAATTTTAACCCTGAACTTTCAATTTCATCAATTTGAACCCTAAACTTAACAAGTTGTGTCAATTTTAACCCTCAACTTTGAATTTCATCAAATTGAACCTCAAACTTATCAGATCATATCGATTTTAACCTCAAACTTGCATAAGTCTAAGAATGTATACCTTTGGTAAACTTTCTGTTTGAACCACTGTACATAACTAATTATTTATTCTTTTTTCTTAATTCACATTGCACCTGGAGTGGTTTCTTATAAATAAAATATTGGAGAAATTTTTATTTTAGATGACTTTTTCTTGTTGTTGAGAACTTTAATTGTAAAGGTTTTTTTCGCTGCAATTTAAGATTACGAAGACAAAGAAACTTTGGAGGTTTTTTATCTTCAAATGTTTGCTGGTTTTTTTTTTTTTTTGTTGCTAAGAACTTTGTGGGATTTTTTTTTCTTCTTTTACAGTTTTTTTTTCCTTGTTAATTAGAAGAATGTACAAATGTAGGAAACAAAAATAAATAAATTTCGAGTTTTTTATTTCTCATATTTGCTGGATTTTTCTTGTTGCCAATAACTTTGTAATTCTTTTTTGGATAATAATGACAAAAAATAGTCTAAGGTATTTGATTTCTTCTAGTTTTTCCAAAAAAAAAATTGTTACAAAACACTAACGGGTGCAATGTGAATTAAAAAACGCAAAAGAAAATTGTCAATTACATGTTTTGATAGCAATTCAAATGAAAAGTTGACCAAAGGTCTACATTGCAACATTTATGCAAGTTTGAGGTTCAAGTTGATACGATTTGTTAAGTTTAGGGTTCAATTTGATGAAATTGAAAGTTTAGGGTTAAAATTGATATAACCTGCTAAGTTCAGGGGTCAAAATTGATTTTTTCCAAAAATCTTTTTTAGGGAAAAAATCAATTTTGACCCCTGAACTTTGCACGTTTTGTATCAATTTTAACCCTAAACTTTCAATTTTAGCAAAGTGAACCCCAAACTTAGCAAATTGTATCAATTTGAACCTCCAACTTGCTGTTATAGGCAATTTTGGACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCTGGCTGGAAGATGGACCAAGGAGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCTCCACAGCCTCTGGCTGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAACTCTACTCTCTATTCTCTGCTTTCTCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGTTTGCTGACTTAAGCATCGGAGCCGGTGTGGCGAGCACCACACCGGTGTGCAGGTTTTCTGTCTTGCAGGCCACGTCTTCCCCCCTCAACTAAAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCCTGTTAATCTGCACATCGGTTATTCCATGAGTAAGGGTATGGAGAAGAAAGACCAAGACGTAAACATAGAGAATTCAGATGGTGACCGCCACCAGCGGAGGTCACGTGACGATGACAGCATCTGGGGGTCACCGAGACAAGCAGGCCGAGGCCGAGCAGAGGATGCCGACACCAAAATTGCCGCCCTTGAGGATGAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAAGTCCATGAGGGGAGCTTGATTAGAAACCCGAGGAAGGGGAAGGAGCCTATGGAGCACACTGCAGAGTCAGGGACGAGGTCAAAAGGAAAGAAGACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCCACTGATCGCACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCGTCACTACACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTAATCGTTGAGAAGGGCAGAAGTGCCAAAACTGCCGAGTCCGAGGCCAAAGCCGCCAAAGCTGAAGCCCGGGCTGCCGAGGCTGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAAAAAGACGACCTCCCTTGGAAGACCGAGCTTCTAAATGCACTAAAGGAGCTCGGAAATCCTCAGGGAGACCAGCAGAAGTCAAAGAACCTTGGAGATCAAAACTTGGAAGAACTAGCCGACCAAGTCGATCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCTCAGAAGTTTAAGGTACCCACGTTCAAACAGTACGATGGTAAGAAAGACCCCGTGCAACATCTAAACGCATACAGAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGCCGGGCATTCTTTTTCACCCTGACAGGATCAGCCAGGCACTGGTTTGAGAGGCTGAAAAGGAGATCCATCAGCTGTTTCAAAGAATTGGCCCAAGCATTCCTTGCACAGTTCATGAGAGCCAGAGAGTAGTGCAAGCCTCACATCAACCTCTTGACGGTCAAACAACAGCCAGGTGAGAGCTTGCGTGATTATATAACTCGTTTTAGTGACGAGGCACTACAGGTTGAGGGGTACAGCGAGGGAGCAGCCCTGGTAGCCATAACAGCCGGACTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCGGAGTTCGTCTCCCGGGCACAGAAGTATATGAGCGCAGAAGAGTTACTGAAGTCAAAGAGGTCAGAACGAGAGTACAAGAGGTTTTCTTCATCTAACTACGACAGTAAAAAGGATAAAAGGCAGCGGACCGACGAGGGAGGCCAGGGCCGAGCAGACCATGGCCGAGGCCGACCAGACAATGGCCGAGGCCGACCAGACCAAGGGGACTACTTGAAGAAATTTGAAAAGTACACCCCTACTTCAGTCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACAAACCTCCTCAGCGCACCCTGGAAGCTGAAGTCAAATCCTGACCACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCGACCAGGAACTGCATTCAGCTGAAAGACGAGATCGAAGCGTTGATCCAAAACGGATACCTGAAGGAATTCACCGCAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCGACAAGAGATGACCCGGGCAAAGATGGTGGTGGACCTCTTCTGGAAATCCGTTGA

mRNA sequence

ATGGTGTTGGGTCACGTAGGTTCAAGAGACTCGACTACGGGATGTGACTGCTCTGCAGATCGATCATTCATTCGAGATGTGACTGCAAATGGGATGCAATTTTGGACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCTGGCTGGAAGATGGACCAAGGAGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCTCCACAGCCTCTGGCTGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAACTCTACTCTCTATTCTCTGCTTTCTCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGTTTGCTGACTTAAGCATCGGAGCCGGTGTGGCGAGCACCACACCGGTGTGCAGGTCAGGTGAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCCTGTTAATCTGCACATCGGTTATTCCATGAGTAAGGGTATGGAGAAGAAAGACCAAGACGTAAACATAGAGAATTCAGATGGTGACCGCCACCAGCGGAGGTCACGTGACGATGACAGCATCTGGGGGTCACCGAGACAAGCAGGCCGAGGCCGAGCAGAGGATGCCGACACCAAAATTGCCGCCCTTGAGGATGAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAAGTCCATGAGGGGAGCTTGATTAGAAACCCGAGGAAGGGGAAGGAGCCTATGGAGCACACTGCAGAGTCAGGGACGAGGTCAAAAGGAAAGAAGACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCCACTGATCGCACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCGTCACTACACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTAATCGTTGAGAAGGGCAGAAGTGCCAAAACTGCCGAGTCCGAGGCCAAAGCCGCCAAAGCTGAAGCCCGGGCTGCCGAGGCTGAGGCCAGAGCAGCCGAGGCCGAGGCTAGCCAACCTCGAACCTATGCGGAGTTCGTCTCCCGGGCACAGAAGTATATGAGCGCAGAAGAGTTACTGAAGTCAAAGAGGTCAGAACGAGAGTACAAGAGGTTTTCTTCATCTAACTACGACAGTAAAAAGGATAAAAGGCAGCGGACCGACGAGGGAGGCCAGGGCCGAGCAGACCATGGCCGAGGCCGACCAGACAATGGCCGAGGCCGACCAGACCAAGGGGACTACTTGAAGAAATTTGAAAAGTACACCCCTACTTCAGTCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACAAACCTCCTCAGCGCACCCTGGAAGCTGAAGTCAAATCCTGACCACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCGACCAGGAACTGCATTCAGCTGAAAGACGAGATCGAAGCGTTGATCCAAAACGGATACCTGAAGGAATTCACCGCAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCGACAAGAGATGACCCGGGCAAAGATGGTGGTGGACCTCTTCTGGAAATCCGTTGA

Coding sequence (CDS)

ATGGTGTTGGGTCACGTAGGTTCAAGAGACTCGACTACGGGATGTGACTGCTCTGCAGATCGATCATTCATTCGAGATGTGACTGCAAATGGGATGCAATTTTGGACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCTGGCTGGAAGATGGACCAAGGAGGCAAAACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCCGCTCGCGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCTCCACAGCCTCTGGCTGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGAGGGGATCCCGAATTCTATCCCTAAACTCTACTCTCTATTCTCTGCTTTCTCCTCTTGCTCTTACTTTTCCACGCCCTACCGTTCTGTTTGCTGACTTAAGCATCGGAGCCGGTGTGGCGAGCACCACACCGGTGTGCAGGTCAGGTGAGATCCTCTGGCCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCCTGTTAATCTGCACATCGGTTATTCCATGAGTAAGGGTATGGAGAAGAAAGACCAAGACGTAAACATAGAGAATTCAGATGGTGACCGCCACCAGCGGAGGTCACGTGACGATGACAGCATCTGGGGGTCACCGAGACAAGCAGGCCGAGGCCGAGCAGAGGATGCCGACACCAAAATTGCCGCCCTTGAGGATGAGGTGAAGGGAATGAATCGGAGTTTGTCCAGAATACTCCAAATCCTGGATAAACCCGGCCCTAGCACCAAAGTCCATGAGGGGAGCTTGATTAGAAACCCGAGGAAGGGGAAGGAGCCTATGGAGCACACTGCAGAGTCAGGGACGAGGTCAAAAGGAAAGAAGACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAAACCCACTGATCGCACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCGTCACTACACAGTTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTAATCGTTGAGAAGGGCAGAAGTGCCAAAACTGCCGAGTCCGAGGCCAAAGCCGCCAAAGCTGAAGCCCGGGCTGCCGAGGCTGAGGCCAGAGCAGCCGAGGCCGAGGCTAGCCAACCTCGAACCTATGCGGAGTTCGTCTCCCGGGCACAGAAGTATATGAGCGCAGAAGAGTTACTGAAGTCAAAGAGGTCAGAACGAGAGTACAAGAGGTTTTCTTCATCTAACTACGACAGTAAAAAGGATAAAAGGCAGCGGACCGACGAGGGAGGCCAGGGCCGAGCAGACCATGGCCGAGGCCGACCAGACAATGGCCGAGGCCGACCAGACCAAGGGGACTACTTGAAGAAATTTGAAAAGTACACCCCTACTTCAGTCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACAAACCTCCTCAGCGCACCCTGGAAGCTGAAGTCAAATCCTGACCACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCGACCAGGAACTGCATTCAGCTGAAAGACGAGATCGAAGCGTTGATCCAAAACGGATACCTGAAGGAATTCACCGCAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCGACAAGAGATGACCCGGGCAAAGATGGTGGTGGACCTCTTCTGGAAATCCGTTGA

Protein sequence

MVLGHVGSRDSTTGCDCSADRSFIRDVTANGMQFWTTPIYKELTRTTGEKSGWKMDQGGKTGKWDGPRPKGSGFWPDPLLGPLARAEPVRSRLVSTASGCPGFAWFDLKRLRIPKNPRRMSRYLYPSSPLKRGSRILSLNSTLYSLLSPLALTFPRPTVLFADLSIGAGVASTTPVCRSGEILWPKSTINSWRRLWGRKPVNLHIGYSMSKGMEKKDQDVNIENSDGDRHQRRSRDDDSIWGSPRQAGRGRAEDADTKIAALEDEVKGMNRSLSRILQILDKPGPSTKVHEGSLIRNPRKGKEPMEHTAESGTRSKGKKTDSMTSKVRGLKPTDRTILRSPESSTLKGRHYTVSTPSYGHTKTDLRNLIVEKGRSAKTAESEAKAAKAEARAAEAEARAAEAEASQPRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLLEIR

Homology

[Close]

BLAST of Spg023377 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 6.6e-25
Identity = 79/189 (41.80%), Postives = 107/189 (56.61%), Query Frame = 0


Query: 407 PRTYAEFVSRAQKYMSAEEL------LKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQG 466
           P T+AE +SRAQKYMSAEE       L+ KR++++ +R       SK +K+ R       
Sbjct: 18  PSTFAEALSRAQKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRV------ 77

Query: 467 RADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDH 526
                            Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P  +K+ P+ 
Sbjct: 78  ---------------VGQKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNK 137

Query: 527 RDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKD 586
           R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+    +A      P R++   D
Sbjct: 138 RSKGRYCLFHRDHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKA-----TPNREN---D 177

Query: 587 GGGPLLEIR 590
              P  EIR
Sbjct: 198 NKSPTREIR 177

[Close]

BLAST of Spg023377 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 126.3 bits (316), Expect = 8.6e-25
Identity = 78/183 (42.62%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 407 PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGR 466
           P T++E +SRAQ+YMSA E   SKR             D K     RTD   +   D  +
Sbjct: 334 PNTFSEALSRAQRYMSAGEFFYSKREP-----------DGK-----RTDPKRERSGDKPQ 393

Query: 467 GRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQY 526
           G     R R  Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P ++K++   R K +Y
Sbjct: 394 GSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRY 453

Query: 527 CLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLL 586
           CLFHRDHGH+T++C  LK+E+E LI+ GYLKE+  + +A Q          G+    P  
Sbjct: 454 CLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQN---------GESDKSPAR 491

Query: 587 EIR 590
           EIR
Sbjct: 514 EIR 491

[Close]

BLAST of Spg023377 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-22
Identity = 74/183 (40.44%), Postives = 101/183 (55.19%), Query Frame = 0


Query: 407 PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGR 466
           P T++E +SRAQ+YMSA E   SKR                +   +RTD+  +   D  +
Sbjct: 159 PSTFSEALSRAQRYMSAGEFFYSKR----------------ESNGKRTDQKRERSGDKPQ 218

Query: 467 GRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQY 526
           G     R R  Q D  +KFEKYT T+VP EQ+LMEI+N  LL  P ++ ++   R K +Y
Sbjct: 219 GSRWEKRDRSCQKDPPQKFEKYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRY 278

Query: 527 CLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLL 586
           CLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  
Sbjct: 279 CLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPKATQN---------GESDKSPAR 316

Query: 587 EIR 590
           EIR
Sbjct: 339 EIR 316

[Close]

BLAST of Spg023377 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 117.1 bits (292), Expect = 5.2e-22
Identity = 75/183 (40.98%), Postives = 101/183 (55.19%), Query Frame = 0


Query: 407 PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGR 466
           P T++E +SRAQ+YMSA E   SKR             D K     RTD+  +   D  +
Sbjct: 118 PSTFSETLSRAQRYMSAGEFFYSKREP-----------DGK-----RTDQKRERSGDKPQ 177

Query: 467 GRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQY 526
           G     R R  Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P ++K     R K +Y
Sbjct: 178 GSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRY 237

Query: 527 CLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLL 586
           CLFHRDH H+T++   LK+E+E LI+ GYL+E+  + +A Q          G+    P  
Sbjct: 238 CLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQN---------GESEKSPAR 275

Query: 587 EIR 590
           EIR
Sbjct: 298 EIR 275

[Close]

BLAST of Spg023377 vs. NCBI nr
Match: XP_024024960.1 (uncharacterized protein LOC112092617 [Morus notabilis])

HSP 1 Score: 111.7 bits (278), Expect = 2.2e-20
Identity = 72/190 (37.89%), Postives = 108/190 (56.84%), Query Frame = 0


Query: 406 QPRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHG 465
           QP+T+A+ V RAQK+++AEE ++++R +       S    SK D +++ +EG +G    G
Sbjct: 9   QPKTFADLVIRAQKFINAEEYMRNRRGQ-------SQTDQSKNDGKRKVEEGSKG----G 68

Query: 466 RGRPDNGRGRPDQGD----YLKKFE---------KYTPTSVPQEQILMEIRNTNLLSAPW 525
            G+      + D         +KF+          YTP +    QILM+I++ NLL+ P 
Sbjct: 69  EGKKQKSEAQQDMNKSKTALTQKFQAYAPPDTTRAYTPLNTTVAQILMQIQHQNLLTPPA 128

Query: 526 KLKSNPDHRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRP 583
            +K +P+ RDKS+YC FH+DHGH T +  QLK +IEALIQ G L+EF  +  A++R   P
Sbjct: 129 PMKGDPNKRDKSKYCYFHKDHGHETSSYFQLKGQIEALIQQGQLQEFVDRVIAERRIALP 185

[Close]

BLAST of Spg023377 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.2e-25
Identity = 79/189 (41.80%), Postives = 107/189 (56.61%), Query Frame = 0


Query: 407 PRTYAEFVSRAQKYMSAEEL------LKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQG 466
           P T+AE +SRAQKYMSAEE       L+ KR++++ +R       SK +K+ R       
Sbjct: 18  PSTFAEALSRAQKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRV------ 77

Query: 467 RADHGRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDH 526
                            Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P  +K+ P+ 
Sbjct: 78  ---------------VGQKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNK 137

Query: 527 RDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKD 586
           R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+    +A      P R++   D
Sbjct: 138 RSKGRYCLFHRDHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKA-----TPNREN---D 177

Query: 587 GGGPLLEIR 590
              P  EIR
Sbjct: 198 NKSPTREIR 177

[Close]

BLAST of Spg023377 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.1e-25
Identity = 78/183 (42.62%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 407 PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGR 466
           P T++E +SRAQ+YMSA E   SKR             D K     RTD   +   D  +
Sbjct: 334 PNTFSEALSRAQRYMSAGEFFYSKREP-----------DGK-----RTDPKRERSGDKPQ 393

Query: 467 GRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQY 526
           G     R R  Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P ++K++   R K +Y
Sbjct: 394 GSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRY 453

Query: 527 CLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLL 586
           CLFHRDHGH+T++C  LK+E+E LI+ GYLKE+  + +A Q          G+    P  
Sbjct: 454 CLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQN---------GESDKSPAR 491

Query: 587 EIR 590
           EIR
Sbjct: 514 EIR 491

[Close]

BLAST of Spg023377 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.6e-23
Identity = 74/183 (40.44%), Postives = 101/183 (55.19%), Query Frame = 0


Query: 407 PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGR 466
           P T++E +SRAQ+YMSA E   SKR                +   +RTD+  +   D  +
Sbjct: 159 PSTFSEALSRAQRYMSAGEFFYSKR----------------ESNGKRTDQKRERSGDKPQ 218

Query: 467 GRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQY 526
           G     R R  Q D  +KFEKYT T+VP EQ+LMEI+N  LL  P ++ ++   R K +Y
Sbjct: 219 GSRWEKRDRSCQKDPPQKFEKYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRY 278

Query: 527 CLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLL 586
           CLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q          G+    P  
Sbjct: 279 CLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPKATQN---------GESDKSPAR 316

Query: 587 EIR 590
           EIR
Sbjct: 339 EIR 316

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BLAST of Spg023377 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-22
Identity = 75/183 (40.98%), Postives = 101/183 (55.19%), Query Frame = 0


Query: 407 PRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADHGR 466
           P T++E +SRAQ+YMSA E   SKR             D K     RTD+  +   D  +
Sbjct: 118 PSTFSETLSRAQRYMSAGEFFYSKREP-----------DGK-----RTDQKRERSGDKPQ 177

Query: 467 GRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKSQY 526
           G     R R  Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P ++K     R K +Y
Sbjct: 178 GSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRY 237

Query: 527 CLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQRWPRPTRDDPGKDGGGPLL 586
           CLFHRDH H+T++   LK+E+E LI+ GYL+E+  + +A Q          G+    P  
Sbjct: 238 CLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQN---------GESEKSPAR 275

Query: 587 EIR 590
           EIR
Sbjct: 298 EIR 275

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BLAST of Spg023377 vs. ExPASy TrEMBL
Match: A0A7N2LNH8 (Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-18
Identity = 66/163 (40.49%), Postives = 95/163 (58.28%), Query Frame = 0


Query: 405 SQPRTYAEFVSRAQKYMSAEELLKSKRSEREYKRFSSSNYDSKKDKRQRTDEGGQGRADH 464
           + P+T +E + RA KYM+AE+ L S R +R  KR      DS++D+ ++    G  R D 
Sbjct: 290 NDPKTMSEVLYRATKYMNAEDALLS-REDRPKKR--DRQEDSRQDQGRKKGRMGDRREDR 349

Query: 465 GRGRPDNGRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLSAPWKLKSNPDHRDKS 524
            R +P  GR           F  +TP + P +Q+LM+I++   L+ P KLKS+P  R + 
Sbjct: 350 -RPKPMGGR-----------FASFTPLNAPIDQVLMQIKDEGSLTFPGKLKSDPSKRPRD 409

Query: 525 QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTAKAEADQ 568
           +YC FHRDHGH T +C  LK +IEALI+ G L++F  K   DQ
Sbjct: 410 KYCRFHRDHGHDTADCYDLKQQIEALIRQGKLQKFVNKGRTDQ 437

The following BLAST results are available for this feature:

BLAST of Spg023377 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159192.1	6.6e-25	41.80	uncharacterized protein LOC111025612 [Momordica charantia]	[more]
XP_022158830.1	8.6e-25	42.62	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022142767.1	1.8e-22	40.44	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022159368.1	5.2e-22	40.98	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_024024960.1	2.2e-20	37.89	uncharacterized protein LOC112092617 [Morus notabilis]	[more]

BLAST of Spg023377 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg023377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZ52	3.2e-25	41.80	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DWY0	4.1e-25	42.62	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	8.6e-23	40.44	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DYL6	2.5e-22	40.98	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A7N2LNH8	1.7e-18	40.49	Ribonuclease H OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Spg023377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 376..405
None	No IPR available	COILS	Coil	Coil	coord: 252..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..589
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..582
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..482
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..398

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023377.1	Spg023377.1	mRNA