Spg023357 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023357
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionActin-related protein 2/3 complex subunit 4
Locationscaffold13: 5770363 .. 5780828 (+)
RNA-Seq ExpressionSpg023357
SyntenySpg023357
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGGAGCTGGATACGGAGCGACCATCACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGGTATACGGCTCCTAAAGCGTATGAATATTTCTTCTACTTGTGTTCTTTCTAACTCCCTCTCAGCGATGAAAATGATCCAAGGGGAATTGGAATTAACAATCCATGTGCATCATTGGATTACCCAAATCCAAAGGATGATACCTTCTTTTCAGAATATATCATTCAGTCATATTTCTAGGGAAGGGAATATGAGAGTTGATTATCTAGCTAAGGATGCTTTAGCTAATAGTTGATCTATGCTTTGGCTAGAGGATTGTCCACAGTGGCTTACGTCAATGAGTAATTTTATTCATTGCAAATGTCACCTTCGATGTACTTGTTCAAATTATTGAAATGAAAGGTCTTTGTTATAAAAAAATATATATATAACAAAAAAAAATCTCAAATAGCTCATTTACCAAGATTTCTCTTTTTTTTTTTTTTATTTATTGAAAGCAAGCATGATTTTTGAAAAGTTATTCATATTTTCTTGTTTGCTTCTTTCACTTTTTGAATTACTTCTAAAATACTTAAAACTATTAGTAGATTTATTCTATGATCTTGCTTAGTATCGAATGCATTTTTAATAATTTTCTTTTTTAAAAAAAAAGACTTGTAATATTCATTTTCAGTTTTTAGAATATGCATTTTTATGGGTAAGTATTGAAATGTCAATTCCAAATATTATTGGAATTTTTTCATGTCAAAATAAATAGGACCATTAATTAAGTAGTCTTTATAAAAAAAAATGTTGAATTTTTTTTTTAATGTTGCAATTTTTAGTTTAAACTTGATTAAGTTTTAATTTTTATCCCTTTGACAATTAGAAATGTTGATGAAAATTCTCTTAGGTGCATTTTAATGTTGGTACTATATATATATATATATATATTTTTGTGACAATTTTGCAATTTTTACTTTGAACTTGATTAATGGTTCATTTTTATCCCTTTGAAAAACTCATTTAAAAATATTGATGAAAATATTCTCACGTACGTTTCATGAATATTAAGTTCCAAATAAAAACAATGCTAGAGTTGTTTTTATTTTTACTTTTTTTTGTTGAAATCTATAAGTTTTGAAAGATTTGTACAATCAATAGTCTTGTGCATTAATCAAACTTAATTTTGTGCAATGATTCATTTTGATTCAAATTAGTAAGTTTGAGTGATTTTTTCTATATTTTTTGCAAAAATTAATAGGTAAGTTTTGTGGAAATCGCATATAAAGTAAAAATTACATCACATATTTAAGTTAAAGCTCATATGAAATGGAAAGTTTACTAGAAAAATTGATTCAAAAATAAATAATAATTTTATTTTTTGGAAAAAAAATAATACATATTTTGTATTATATATATCTAATGCGATTACATTTCAATAGTTCGACCTTAGCTCATTTGGTAGAGCAGACGCCTGTATGAGAAAGCAGCTTCAATAATTAGGTCGCTGGTTCGAATCCGTTATGTCGGATTTTTTCTCTCATTTTTTAAATTTTAATTTTCTAATTAAGTTTTTGTTTTTTTTTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTAATTTTAAAAGAAGCGTTCTTTCCTAAGTTTCCTTTGCCTTTTTGCTTTCTCCGGCGTCGGATTTTTGGAGCCTGGAGCGCATTCTACCTATAATCCCGTACTCTTGCGAGCTCACTGCACGATCCAGCCATTTTTCTCCATCCAAGTTTTCAGTACAGCGCGGGAATTTTGATCTCCGGAACGTACTCTCTCGAATTCAGAAATGGTTCGTAACGAACAATTCTTCTCACCGTTGATCTTTGCTTCGTTTGAATTTGTCTATCTGAGTCGTGTTAATCTGCTGCCTGAATGATGAGAAGATCGTTGCGAGTGAAGTTCGTTTGTTTTACTTAGCAATGTCCGATTTAACTCGTATTCCTAATGAAATTGATGGTGTTAATGGACAAAGTCGCTTCTGGATTCGAAAACGTTTTCCGATTCCTTCTTAGTATTGAGATGGCTTGTGGAGGAAGCAAGCTTCTTTTTTCCATTTCTCTTCCTACCTAATTTTCCGTCTGTATATGCAAACTCAGGCAAGTGCTTTACGCTTGTATTTGACATGCATACGGAACACTCTTGAAGCCGCGATGTGCCTTCAGGAATACTTTTTCCATTTCTCTTCCTACCTAATTTTCCGTCTGCCTTCATCGTTAACGTGTTGCTGTTATTTCAATTCAATTTCGTTTGAGTGGTGACTTTTGCAGTTGGATATATTATTTCTGGAATCGAACTTATTAGGTTCTGTAAAATAGTTCGTTCTTGATTATATGAGAGTTATGTTAGCTGACTTTTCGTTCTACGGTTTATTGGCTTTACGAACCTGAAGAATGCAATGTGTAAGTGCGAGTGGAAATACTTCTTTACGCATTTCTAGGTTTTCTTAATTTCTGTCCAGAAGGACGTTTGTAAGAGGAAATTAATTTATTAACTCTTTAATTTGTGACGATAAATCTAGAGAGTGCTGTGCTTTTAGAATTGTGTCTTGAAGAAGTCGAAATACTTTCTAATGCATACTCCTAGTTGAAAGAGAAAGAAGTCCTTGAACATTGATGTTGTTTTCGTTTTCCCGCATGGTTAATTCATTTTACCTCTTGGCCAAACTTTATAAACAGTTAGGTGACTCAAGTAGCCGAACTTGAATATCCCTCCAGGTCAACCATATATGTGTTAAGCGTAGTGAATATATGTGTTCTTCTGTAGTGCATTGAGTTGAGAGTGAATGAAGCTTACACCTTGCATGACTAGTTAAATTTGCGTATGGTATTCCTCCCTGATACTTTTTGAAACCATTTGTTTACTCTGTATATTTGCATTTTCTAATACAAATCTCCCTGCCTTGTCGGGCTTACTTTCACATGTTTATGGTCTTTGATTTGTCAATTTTTTCCCCACATGATTGCAGAATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTGAAGTATGCTTATGTCTTCAACATCTTAAAACTTCTTGCTGTATTTATTTTAGATTTATCATCTTTCGTGAGCCACTGATGACCTGAGTTGCTTGGTTAATGATTTTATTAATAAGCTCCATGTCAATTATTCACTGAAAAACCCTCACCCTGCCTTTTGAAGTTTATTGAAAAGCAATTGAACTAGGAAACTTTAGTCTTTGCCTTTGGGATGTCTGATAGCTATTCTCATATCAATATTGCATAGAGGTATAACATTGTGATCATTATTCTATTATTAAATCATATTTGGTTACTGCTTAGCTTTCTTGTTGGTTAGCTTATTTTAGCCAACCTCAGCTTGTATTGGTTAGTTGAATTTGAATATGCTGTTGATAGCTGGTAACAGCTACCTGTCTTAATAACTTGTATAAATACCTGCCGTGCTAATTAGCAGGCAGATAAATAATAACTATTCAGAAAGGCTGTTTATCCCATTCTCCAAGTATTATTAGTTTCTTGCTTGCACCATAATAATTGAATCTTCACATGGAAAGGAACAATGAAAATATGCTAATTTATGCCTCTTCTCCTTTTCTTGTTTTTTTCCCCTTCCAGGACCAGCTCGGAACTTCTTCTCAATCCTGTAAGATCATGTCATAAGTTTAAATAATGAGTATTCCACCATTGACCATTTAGTTAGTTTAAACTATTAGTAGTGATAGTGAGAAACATCAAGCATTTATGACACCTTTGACTTTCAGACTAGAACCTCATTATGCCTCATGGTGTGTAACTGTTTTCTGTGAAGGAATGTTGAATTTCCCACAATGGATCAATTTTTTTCTGCTGCAAATTGCTATTAAATAAATGTCAGCCAATGAACATGTAATTTTAGTTAAACGTTTTTTTTCGTGTCTTTTCCTTTTAAATTTGAGAATCATGTTCATGCAAAGAACATCCTTGGGAGTTGGGAGTAGCTGAGGGAATGGCTTTTTATGTTTATATAACTGTGAGGGAATGGCTTTTTATGTTTATATAACTGTGATATGTTGATGAACATCTATGATCTCCCATTAATGTTTTGCTCTTGCAGATCTTAATCTGTCGAAATGAGTCAGAGAAGTGTTTGATCGAGACATCTATAAATTCACTTCGCATCAGTCTCAAGGTGATTTTATTTTCTATTTAATTTTAATTTATGGGCTCAAGGTAAATTTTGATGAATTCTGTTTATATGCTTTGCTGATATTGATTAGGCACAAAGAGATGGGTACCTAAGTCCTGTGGACCATTTTAACTGCTTAAAGTGCTTCTTTGAATTGGAGCTAGTGCTTTAGGATTTTCTCATGGATTGAGTTGAATTCTTAATATTGGAGTCAGTATCTGGATTCTCAACTGAACCGCTAGGTTATGCATATGTGCAAGTGTAAAAGCAGATTTTAGCAGCTAAGAAGGGTAGTTGTATATTATTGGTTTTTGGTCAGTTTTTTAACAGTCAACTATCCGTCAGGTTTGTCCAGAAGGTTTAATTTCAACTTCTCGTTGGGATTTATTTGAGGTCTAGGCCATCTTCGGTCTGGGTTCTGTAGTTTTATGTTTGTGCAGTTTTATGTTGGCAATTTGAAAGGAGTAGCAGTTTTTTAGAGAACTTTGGAGAGTTTCGTTCATTAAGGAAAAGGTCAAAAAGGGCGTGGCTTCTTATTGGACTGCTAGTTTAAAGTTTGTTCGCTGGGAATCCTTTTCTTTACTGAAATACGTGGGAAGATATAATGTATGTTTGCGGAGTATTGTTTTTCTATTCTCCATATGCTTCTTTTTATGGTTTTTTCCCTCTTAAATTTTCTTTTATCATTATGTTTATTGTGCGTTATCCTTGGATTGGATCTCCTCCCGTAAACATTTCGTTTTTTTTTAAATAAAAAGGGTAGGTGTAGATGAAGGTGCTATATTTATGGTTGCAATTACAGCACAAATCTAACTTCAACCTTGAAGGCCTATGTACTGCCATTAGTCACTTTCCATCTATTCCATTACTTAAGGCTAACTCCTTTTACCCTTTCTAGCTTACCTGAAGAAAATCTGCTGAACGTATGAGATATAACATCACAAATTAACTTCAACTTGTTCGCAATTATTTTAGGGAACTCTTCTTGTGCATAGGTTAAGCAGACAGATGAACTGGAGAACATCCTGACTAAAAAGTTTCTTCGTTTTTATCAACGAGGGCAGAAGCTTTCCAGGTTCTGAGAAGAAAACCCGTACAAACCGACAACCGACCAGAGTTTTTTACACCCCTACAGTGCTTATTATCAGACCGAAACAACAAAAAACTGAATCTATAATTACATATCTATTTTACAACTATTTGTGTCTGCGTAACTCTGGTTGCCGTGGTTCTGGAAATGACCTACAAATAACTTTATTTCCTTTTGGTTTCATTTGACAGGGATATGACATTAGCTTTCTCATAACAAACTATCACTGTGAGGATATGCAGAAGCAAAAACTCATTGATTTTATTGTACAGTTCATGGCGGTAAGAACTTTATTTTCACTACCACAAATCAGTATTCTGTTAATTACTAGATTTCATTCTATGCAACTTAAATTTCTCTCTGGCCTAACATGTTGCTCGTTTTTTCTTATTTTTTTAATTTTTATTCTTACTTAGAAAGGTCAATTTTATTGAAGTTTAACAAAGACTCAACTACATAGACTCAATCACTAGGATTATTAAAAAAAAAAAAAAAAAACTCAAATGACTCACTCAGAAATTGACCTCAAATGACTCAGACTCAGAAATTGACCTCAAATCACTCGACTCAGATATTGACCTTCTTCTTCATTCCTTTTTTTGTTCGTCCCCTTCTTCTTTCCTTTCTTCTTCTTTCATTTCTTCTTCTTTCTCAAACCTTGATATTCTCGCTTGTCTCCTTTTCCAGGCTGCTTCCAGTGCTTCGGTCTTAGCTTTTTTCATCACTTCCCGCCGTCGGTTGGCTCTGTCCTCTCCGACTGGTTTAAAGCTACCCAGTTTATCTTTTCCGATCATTTTTAGCAGTTGGGTTACTTCAGTTTGAGCATCAATTGTTTTCTCCCCTTCTTCCGCCAATTTCACCGTCAAAACCTGTATCTGGATATCCAAATCTGAAATATCTTCTTCGGTTTGGATGTATTGCTCAAGTTGAACAATTGCTCCATTTAAGCTCCCTGTAAGACTTCTTAGGCGTTGAAGGGCATCCATTTTCTTTTTTTTTTTTGGGAATGATTTGGGCTTTTTCTGGCTTTTGAATGCTTTTGAATGGTTTAGGGGTTATTTATAATCATTTTACATCAACCTCTAAAACGGAATCAGTTGGTTTGTATTCATGTTAATTACACCTGTGTGAAATGCCATTTCCCCCTTCTCATGCAAATACACAGTGTGAAATGCCATTTCCCCCTTCTCATGCAAATACACAGTGTGAAATGCCATTTCCCCCTTCTCATGCAAATACACAGGTTTTCAATTCATCTCCTCCTTCCTTAAAACCTATTTTAATTGTTGGTTTCTTCTTTGATACCTTGATATTTTTTCTTATTCTGAATCTATCTTCATACTGTATTTAGTTTCGAATCTAAATCCAATGAATTGATAAATTCAAATACAACGTAAATGTAGGATGGAATCTAGAATTTACATTTTAATTTAACGCCACATTAAAAATCAATCAAATTCAAATTAACAAAGATACATTGAAACAAATAAATAGAAGTTATCTTAATCTATAAATTATTAATGAATTTTAAAATTGAGAAATATAATAATAATAATCTCATGTTTTAGGGAGGAGAAATAGGGGTGAATTAAGGAAATAAACTATATTCAGAAGCAAAACACTCACCTAGGAAAGCTACAATTTCAACATCAGTGTGGACTTAAAGTATGCAATTTAATTGAAGCACATCAAATCAATTTAATGGTTTCATCTGGTTTTTTGGTTTTTGAAAATTAAGCTTAAAAATATTACTTCCACCCTTAAGTTTCTTGTTTTTGTTTACCTTGTTCCCATGTTTTCAAAAACCAAGTCAAGTTTTGAAAACTAAAAAAAAAAATAGTTTTCAAAAACTTGTTTTTGTTTTTGAAATTTGACTAGGAATTCAAATGTGCCTTCAACAAAGATGAAAACCACGATAAAGAAATTGATAGAAGATAAACTTAATTTTTAAAAACCAAATGGTTATCAAATATAATGGAGCCTAAATGGTTATCATAATCACCTTTTTTTATCAGAAGAGAATTTTTTCTCAGTTGTGCAACCCTCTAATCTTCCTCCTCCATCTATTAAACAAAGACGTTAGAGTAGAAAAATGCTTCTTTATTTAATACATTATAAAACGTTTGAAGATAATAGTTTCATATATAAACCTTAAAGATTGCATATGAGTAAGTCATTGTGTCATCCAAGAATAGAGAAAATAGTTCATTGCTCTAAAACACAATAATGGTGAATCCAAATACTTGTTAGCCAAATTGAGAAAAAATAATGTAAAATAAAAACATATAGAATTATTCTTTTTGAATTCCCTTGTGAATTCATCATAGCTAATCATGAAAATGGAAAATATCAAATGCAAAACTAAAATAATCAGAAGAAAAAGGAAAGAAGGCAAGTAAAACTGAAAAACTCATACAATAACCATATTGTAATTAGGCTAAGTATATATGTTTTAGTTCCCATTATTTGAGATTTTTTTTTTAAAATTATTCCCTATTATTTAAAAGTTTCAATTTATTTCCCAATATATCAACATTTTTAATTTAGTCACTCACTGTTGGAGAATATTAAAATTGGTTGATGATTACATAACTTAAGTATCATGTCAGGTATGTTTATTATCAACCAACTTTAACATTTATTGACAGTGAGAGACAAAACTGAAAAGTATTCAAACATAAGAAATTAAATCGAATTTTTTTAAACAATAGAGACTAAATTGAAAAACATGATTTGGACATTTGGAACTAAAATATATATTTAGTCAATAATTAATACTAGATCATAATGACGAGAGATGTTCCTTCGAGCTTGTGTTAGAGTGTTTTGTCTTAAAGTATGTTGAAAAAAATACTTTGCGCACAATACTAGCTGTGAATAATGGAGGTGTCCACCATCCCCCGAAAAAGTGAGTGTATATTTAATTAGTAGCTTGATAAAAAGAATATAGATGGATGTGTGTGTACCTTTTCTTCTTTAGTTTTGCAACAGAGGAGTTTACTGAGAAGTTTACTAAGGACTTGTTTGGAATGACTTTCTAAATGTTTATAAGTGCAAAATAGTGTTTTCAAACACTTAGAAAGTTCCTTTCAAATAGGCAGTAACACTTCAAAGTAATAAATGAAAACGAATCATCAAAATAGATGAAGTTTATCATAACAAGATTAAGAAGACCTTCCTCTTTATCGGCAAAAGAAAAATTCCCCTAAAATAATGTGAGGTATTTGAAACTAAAAAAATAGAAAATTTTAGAGCATACAAAACTTATCCAACCAGAGCATTCTAAACATAAAGCAGACAAAGTGATCAACACAACTAGAACATTCTTCATAATCTAAGCGTTTGATACTTTTGAACCAACACTATATTCAGAGTATACCATTCAGACCAAATGCACCTAATCGGGATGTTCAGTAACACCAGAACACACATAATCCAACATCTCATAACCCAAACCATACATGAACAACAATTCATATAAGTACTCCCAGCCTAGTCAAGACCATCAAATTAGTAAGGTTACTTACCTAGGCCAAACAATATTTAAATTGGCTTACCCTCGATTGAGAAAAACCTGAAAAGAGAGTTCTTTGTCATTTGTCTTATATCTTTGTGATAGAGAGATAAGAGACCCCAAATTCTTTTATTTAATTCTGCTTATTATCAGACCGAAACAACAAAAAACTGAATCTATATTACATATTGAGAAACTCTTTTACAACTATTTGTGTATGCGTAACTTTGGTTGCCGTGGTTCTGGAAATGACCTACAAATAACTTTATTTCCTTTTGGTTTCATTTGACAGGGATATGACATTAGCTTTCTCATAACAAACTATCACTGTGAGGATATGCAGAAGCAAAAACTCATTGATTTTATTGTACAATTCATGGAGGCAAGAACTTTATTTTCACTACCACAAATCAGTATTCTGTTACTTACTTGATTTCATTCCCATGCAACTTAAATTTCTCCCTGGCCTACACTTGGTCATCCTACTACCCCATCTGCTCTTCAATTTAATCATTTGAACAAATCTTCCTTAGCTGCTGGTCTAGTAGGTAATTTAACTGAATTTTATGCTCGCTTTTCTCTATTCTGACCCATCAACGGACATACACTATTTCACAAACTTTCTTTAACTAGGTTTTGTGGAACAGAAAAATGAGCAGCAAAAATCACTTGGTTAATTGACTCTTACCTGCTGAAGTTGTCATGCTTGAATTAATATTTAGAGAGAATATTTTTAGTTCACTTTTGGATTCGTGCTTCTTCTTCTTTTTACTTCTTGGTATCATTGTTTTAATGAATGAACTGACAAATTTAATGAGTTGAGAACATATTGAATTAGAATTTTTTTTTCCATGTGCAGGATATTGATAAAGAGATAAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTTTTTAAAGCAATTCATATGATGCCTAGTACATACTATCTAGGTAAACTGGACTTTCCCAAAGTCTTTTCTTCGAGATTATTCTATTGCTGCTTGTTGTGTATATCCTTGTACAACTAACGAGATTTTGAAACTTCATTGTTCCGTTTTTGTTTTTGTAGTAGCACTTAATGGTCGTATAGCTTACATGGATTTGGATTTGATCCAGAAATATACATCGTGGGTGGAGTAGGCTATTAAGTAGTCGTCACTGCAAATTGTTGGTAACCTTAAAACTTAACCATATATTTGTCATACAAAATCGTGATTTATGCATTCTTCCCCAATTTTGAATCGCCTTTTCTTTTGGAAAAAATTTATAATCTCTCTTTAAATGAAGGCTTGCCTTCAATCTCTCTTTTGTTCTATTAGTTAAACACCAACGCAATTTTTGAACTCCATCACTCATCGTGCTATTGGCATTAAACCTACGCATTATAGTTAGATTATGATGCTCAAAACAAGTGGCATTATAGTCGATTAAACTTCCGGAGGCTCTTCTTTGTTAGTTTTTGAAGAGGGTTATCTCTACCTCTTGCTCTTAGGGGAAAAATTTCTAGTACTACGGTAGTA

mRNA sequence

ATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGGAGCTGGATACGGAGCGACCATCACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGAATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTGAAGACCAGCTCGGAACTTCTTCTCAATCCTATCTTAATCTGTCGAAATGAGTCAGAGAAGTGTTTGATCGAGACATCTATAAATTCACTTCGCATCAGTCTCAAGGTGATTTTATTTTCTATTTAA

Coding sequence (CDS)

ATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGGAGCTGGATACGGAGCGACCATCACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGAATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTGAAGACCAGCTCGGAACTTCTTCTCAATCCTATCTTAATCTGTCGAAATGAGTCAGAGAAGTGTTTGATCGAGACATCTATAAATTCACTTCGCATCAGTCTCAAGGTGATTTTATTTTCTATTTAA

Protein sequence

MFSFKERSSQPREDIVRLHTYASVDPRRGGAGYGATITYLDGIICGALEFKDPTHLSPLAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVILFSI
Homology
[Close]
BLAST of Spg023357 vs. NCBI nr
Match: XP_008457157.1 (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-20
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. NCBI nr
Match: XP_008456149.1 (PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456150.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456151.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456152.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456153.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456154.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_008456156.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_016901908.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_016901909.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-20
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. NCBI nr
Match: XP_011651239.1 (actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_031738460.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_031738461.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_031738462.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_031738463.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_031738464.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_031738465.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_031738466.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-20
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. NCBI nr
Match: OMO88611.1 (ARP2/3 complex, 20kDa subunit (P20-Arc) [Corchorus olitorius])

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-20
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 64  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV 120
           KF+NFPCQEVERHNKPEVELKTS+ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Sbjct: 265 KFINFPCQEVERHNKPEVELKTSTELLLNPVLICRNEAEKCLIETSINSLRISLKV 320

[Close]
BLAST of Spg023357 vs. NCBI nr
Match: XP_011649071.1 (actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_038907196.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Benincasa hispida] >KGN61430.1 hypothetical protein Csa_006614 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-20
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. ExPASy Swiss-Prot
Match: F4JUL9 (Actin-related protein 2/3 complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=ARPC4 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.3e-22
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. ExPASy Swiss-Prot
Match: O96625 (Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=arcD PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.3e-14
Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NF  Q VERHNKPEVE+KTS EL+LNP++I RN++E+ LIETSINS+RIS+ 
Sbjct: 16  LTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNERVLIETSINSIRISVS 75

Query: 119 V 120
           +
Sbjct: 76  I 76

[Close]
BLAST of Spg023357 vs. ExPASy Swiss-Prot
Match: Q641G7 (Actin-related protein 2/3 complex subunit 4 OS=Xenopus laevis OX=8355 GN=arpc4 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-12
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NF  Q VERHNKPEVE+++S ELLL P++I RNE EK LIE SINS+R+S+ 
Sbjct: 16  LQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVVISRNEKEKVLIEGSINSVRVSIA 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. ExPASy Swiss-Prot
Match: Q148J6 (Actin-related protein 2/3 complex subunit 4 OS=Bos taurus OX=9913 GN=ARPC4 PE=1 SV=3)

HSP 1 Score: 72.0 bits (175), Expect = 5.3e-12
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ 
Sbjct: 16  LQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIA 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. ExPASy Swiss-Prot
Match: P59998 (Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens OX=9606 GN=ARPC4 PE=1 SV=3)

HSP 1 Score: 72.0 bits (175), Expect = 5.3e-12
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ 
Sbjct: 16  LQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIA 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. ExPASy TrEMBL
Match: A0A1S3C2N8 (Actin-related protein 2/3 complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496175 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. ExPASy TrEMBL
Match: A0A1R3J1B1 (ARP2/3 complex, 20kDa subunit (P20-Arc) OS=Corchorus olitorius OX=93759 GN=COLO4_20174 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 64  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKV 120
           KF+NFPCQEVERHNKPEVELKTS+ELLLNP+LICRNE+EKCLIETSINSLRISLKV
Sbjct: 265 KFINFPCQEVERHNKPEVELKTSTELLLNPVLICRNEAEKCLIETSINSLRISLKV 320

[Close]
BLAST of Spg023357 vs. ExPASy TrEMBL
Match: A0A0A0LHM5 (Actin-related protein 2/3 complex subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_2G120960 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. ExPASy TrEMBL
Match: A0A1S3C5J1 (Actin-related protein 2/3 complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496896 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. ExPASy TrEMBL
Match: A0A6J1H2P7 (Actin-related protein 2/3 complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111459934 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTSSEL+LNPILICRNESEKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSSELILNPILICRNESEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. TAIR 10
Match: AT4G14147.1 (protein binding )

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-23
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

[Close]
BLAST of Spg023357 vs. TAIR 10
Match: AT4G14147.2 (protein binding )

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-23
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0 

Query: 59  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK 118
           L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLK
Sbjct: 16  LEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKCLIETSINSLRISLK 75

Query: 119 V 120
           V
Sbjct: 76  V 76

The following BLAST results are available for this feature:
BLAST of Spg023357 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008457157.13.0e-2090.16PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo][more]
XP_008456149.13.0e-2090.16PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo] >XP_0... [more]
XP_011651239.13.0e-2090.16actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_031... [more]
OMO88611.13.0e-2092.86ARP2/3 complex, 20kDa subunit (P20-Arc) [Corchorus olitorius][more]
XP_011649071.13.0e-2090.16actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus] >XP_038... [more]
BLAST of Spg023357 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JUL94.3e-2285.25Actin-related protein 2/3 complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=A... [more]
O966254.3e-1462.30Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum OX=44689... [more]
Q641G73.1e-1260.66Actin-related protein 2/3 complex subunit 4 OS=Xenopus laevis OX=8355 GN=arpc4 P... [more]
Q148J65.3e-1260.66Actin-related protein 2/3 complex subunit 4 OS=Bos taurus OX=9913 GN=ARPC4 PE=1 ... [more]
P599985.3e-1260.66Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens OX=9606 GN=ARPC4 PE=... [more]
BLAST of Spg023357 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C2N81.4e-2090.16Actin-related protein 2/3 complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
A0A1R3J1B11.4e-2092.86ARP2/3 complex, 20kDa subunit (P20-Arc) OS=Corchorus olitorius OX=93759 GN=COLO4... [more]
A0A0A0LHM51.4e-2090.16Actin-related protein 2/3 complex subunit 4 OS=Cucumis sativus OX=3659 GN=Csa_2G... [more]
A0A1S3C5J11.4e-2090.16Actin-related protein 2/3 complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
A0A6J1H2P72.5e-2088.52Actin-related protein 2/3 complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of Spg023357 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G14147.13.1e-2385.25protein binding [more]
AT4G14147.23.1e-2385.25protein binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008384Actin-related protein 2/3 complex subunit 4PFAMPF05856ARPC4coord: 59..119
e-value: 5.5E-20
score: 71.6
IPR008384Actin-related protein 2/3 complex subunit 4PANTHERPTHR22629ARP2/3 COMPLEX 20 KD SUBUNITcoord: 59..119
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 56..121
e-value: 1.7E-23
score: 85.0
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 58..119
NoneNo IPR availablePANTHERPTHR22629:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 4coord: 59..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023357.1Spg023357.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0030833 regulation of actin filament polymerization
biological_process GO:0030041 actin filament polymerization
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015629 actin cytoskeleton
molecular_function GO:0051015 actin filament binding