Spg023314 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023314
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold13: 11636398 .. 11638234 (-)
RNA-Seq ExpressionSpg023314
SyntenySpg023314
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTCTCGTTTGCACGTCCGCGCCGCCGCCTCCTTCGCCTCCGTCGCCGCTGGTAACAGATTGCAGCCGTCCACAGTTCCTCTGCCGCCTCCGTCGTCTTGCCGCCGTGCCTCGTCGTGAGCCGCCGGTAATCTCTCTCTCTCTCTCTCTCTCTCTCGGTCTCACGTTTTTCCCCTCTCCCTCTCGTCTCTGTCTCTCTCTAACTCAGCTCACTCTCTCCGTCTGCAACACGCCTGTGCCGCCGCCGCCTTCTCTGAGCAGACCGCCGCCGCCACACATCGAAACGCCTCACGCCGCCGTCGCCCAGAACGCCGCGTCGCCGTCGTGTCTTGTTCTCCTTCGGTCAATCTCTCTCTCTCTAGTCTCTCTCTCTTTCGGCCTCACTCTCACAGTCTCCCTCTTTACTGCAGCAGCCACGAGCAACCACTACCGCCCTCGGTCTTGTCCGTTTTTCCAGATCTATGGTTGCCGTTGTTCAAGTCTGTTCGTCGCTTTTCAGATTTGTTCATTGCCTTTCAGATCTGTTCGTCGCCGCCGTTCGATTTTCAGCTTTGCTCCTAAAGAATTAGTTGGGTAAGAAACTTGGTTGGTTAAAGCTTTGGTGTTCTTGTTTTTGATTGTACTGTGTTGGGATTTGAGTTGCTGATTTAAATATTAGGAATTGTGGAATTCCTAGAAAGATCCGTGGGCCAAGCTGTTATACGGAGTTGTTAAGGTAAGTTAACTTGTTGAATTGGAATGAACTTTATGCATTGAAATGATAGTTGTAATTTTGGCATGAGATTTTATTATACGTTTGGGTTGAGACTGAGATGATATGATGCTTTTGTTTTCAAGAATATGGTTGCTGCATATTTGTACTGTGTGATATAAGCGAGTGTATGACTGTTATATTTTTTTTATGGCTGACTGGCAATGTATGTGGACAGTGAGGAGTGGTGGTTTCTGTGTTCTGAAGTGTGGAATGCCTGCTACGTTTCCCGTAGATGACTGAGTTGGGATGGAACATACTGGACTAGCCTGTTAGTAAATTTTGAGAGAATGAATCCCATCAGTTAGGTTGCAGTTAGGATTAACCTGCGTGCTAAGAGGCCTTAAAGGGAAAAGGAGTAAGAAAGGGAAAAGAATAGGCTAGTTGCTTTAGTAGGGGGTCGTGTCAATTAAACACCTAGGACTGAGATGTAATAGACTGAAATGAGGAGCTAAATGGGCGGAACTTGATTTCGCAGAGTAGGTGCCATTTACTAACTGTGGAAGTTAACTTCTGACTTAAAACCCATGGACGCCCCACTAGTGAAATGGTAGTTAAAGCGCTATGTGCACATTAGTGTCTTGATGGGTGAAACTTAGCTCCACTGACTAGGTGCCTTCTACTATCAGAAGCAGTAGAGATCTCCCAAAATGCCTACATGTGCACTTTCAGTGAGTTGGCAAATTATGTAGGTGATTTAAATTGATCACGAGCCCCATGCTATGGAATGAATGAAATGAAATGAACTAGAAAGAGATGACATTACCTTTGGGCCCTTAGCTCGTTTAACCTTTTGAAACCTTGGACGTTGCATGTTTAGCAGTAATGTTACTTACTGAGTATTTTTCTTAAATACTCATTCTTTTCCCTAACATGTAAATGCAGGTAAAGGCAAGGGTGTACAAAATGTGGGACAGAACTTTGATGGATGAGCCATGGAATCCCGTAGGATAGACTTCCGCTTTTACATGTTGAAACTCGTTTTATTTGCAGTTGTGATGTTATGTTTTGGTGTTGTTTCCGCTTTTAAGATGTTCAATTGAAATGGTGAAAGATTTTAGTTGTTTCTGTTTTAACTGGGATC

mRNA sequence

CTCTCTCTCGTTTGCACGTCCGCGCCGCCGCCTCCTTCGCCTCCGTCGCCGCTGGTAACAGATTGCAGCCGTCCACAGTTCCTCTGCCGCCTCCGTCGTCTTGCCGCCGTGCCTCGTCGTGAGCCGCCGCTCACTCTCTCCGTCTGCAACACGCCTGTGCCGCCGCCGCCTTCTCTGAGCAGACCGCCGCCGCCACACATCGAAACGCCTCACGCCGCCGTCGCCCAGAACGCCGCGTCGCCGTCGTGTCTTGTTCTCCTTCGATCTGTTCGTCGCCGCCGTTCGATTTTCAGCTTTGCTCCTAAAGAATTAGTTGGGAATTGTGGAATTCCTAGAAAGATCCGTGGGCCAAGCTGTTATACGGAGTTGTTAAGTGAGGAGTGGTGGTTTCTGTGTTCTGAAGTAAAGGCAAGGGTGTACAAAATGTGGGACAGAACTTTGATGGATGAGCCATGGAATCCCGTAGGATAG

Coding sequence (CDS)

CTCTCTCTCGTTTGCACGTCCGCGCCGCCGCCTCCTTCGCCTCCGTCGCCGCTGGTAACAGATTGCAGCCGTCCACAGTTCCTCTGCCGCCTCCGTCGTCTTGCCGCCGTGCCTCGTCGTGAGCCGCCGCTCACTCTCTCCGTCTGCAACACGCCTGTGCCGCCGCCGCCTTCTCTGAGCAGACCGCCGCCGCCACACATCGAAACGCCTCACGCCGCCGTCGCCCAGAACGCCGCGTCGCCGTCGTGTCTTGTTCTCCTTCGATCTGTTCGTCGCCGCCGTTCGATTTTCAGCTTTGCTCCTAAAGAATTAGTTGGGAATTGTGGAATTCCTAGAAAGATCCGTGGGCCAAGCTGTTATACGGAGTTGTTAAGTGAGGAGTGGTGGTTTCTGTGTTCTGAAGTAAAGGCAAGGGTGTACAAAATGTGGGACAGAACTTTGATGGATGAGCCATGGAATCCCGTAGGATAG

Protein sequence

LSLVCTSAPPPPSPPSPLVTDCSRPQFLCRLRRLAAVPRREPPLTLSVCNTPVPPPPSLSRPPPPHIETPHAAVAQNAASPSCLVLLRSVRRRRSIFSFAPKELVGNCGIPRKIRGPSCYTELLSEEWWFLCSEVKARVYKMWDRTLMDEPWNPVG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023314.1Spg023314.1mRNA