Spg023253 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023253
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Acyl carrier protein
Location	scaffold13: 2132945 .. 2137139 (+)
RNA-Seq Expression	Spg023253
Synteny	Spg023253

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGTCTTTGTGCTCTAAGCTTTCTTTCCCTTTCACCACATTTTTATCTCAAATCTCAGATCTCTCTGTAACTCTCTCCTAAACCAAAATGTTCTCCATTGCTGGATCTTCGGTTTCCATGTCTTCTCTCTCCGCCTCTTTCAAGCAGAGCCAGGTAAATCGTTTTCCTCTTCTTTTTAGTTCACTTCCAGGGCTTATCTGTTGTAAATTTAACCTACTTTTGCTTGAAACTTTGTAAAATTGGTTCTATGAATCTGTAGATTAGCTCTGCTTTACTTTTTGCGAAGTGATTTTCAGGATCCGGTTTGTTTTCTTGGAAAAGTTTTAGGAAATGTATGTGTTAGTTCCCTTCGATTAGAGTTACAGAATATTTTTGTTACTGTTTGGATTGTTTTTTTTCCAATTTCTTTCGACTGAGATTTCTGTTGAAATTGAACGAGTCAAGTTTAAAATTCTTGAGGATTCGACTAGATTGGATACGGTACTCGGAATTTTGAGCATGGACGGTGGTAGATCTGATTGCTTTAATTTAGCGTCCATGAGTTTTTTCCGTCGGATTTGATCGTAGAAACATATTTTGTTTGTTTGATATTGAGAAACCTTATCTAATTTACATATTCGTCATGTTATCTGTATTTTTAATGCTTCTGCTGGAAATTTCTTGCAGGTGTCTAGCGGAAGGATTTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGTAGGGCCAGTTTTCCCTTGCGAAGGAGCTTCAGGCAGAGAAGCCTTCAGGTTTGCAGTGCGGTAAGTGTTCTACTACTATATTTTTCGTGGTTTAATTTAAGTTTTTTCTTCCTCGGTTTATTGATATTGAGAGTTCCATGCATATTTGTTACTGCCTTTTAATCGTCAATGTCACTGTCCTTGTAAGTTCTTTGTGTCATTCGTACGTACTGTTTCAAAACTATTTCTGTTGGCTCATATTGCTCACTCTGAAATTGTTGCAACAAATTGACTGATAATAAATCAACTCAATTGAACTGAAAATTTTGGTTCTGTTTGTGCTCGCACCAGTCTTTGTATGGTTATATTGTGTGTGATTTTTCTTTTTTTGGTAGTTTTCTGTTTTCTGCAGATTATGATTGTGGGAGATGAGAAGATAAGACTTTCATATTCATTAAAAGATTTAGATATAGGTAGATGAAAAGTACTTGAACAAGTCTGCATATTGATATAGCTGCTTGGTTTTAGCTTTTCATCATCACAATTTGCATTGATTCCACACGTTTAAACTCAAGAGGGAATCCACACCATGAAATTGAATAGTTTCCAGAACTCATAATATTTTGGCCATCGTCGTGTGTTTTTTGTGAGTTTATGTCTCTAAAGTTCCGATGATTAGTATGGTTTTGTTGCTGTTGACTGTTGGTTTGTTTGTTTAACCTCCATTGTATTCAAATGGAGGATGGCTTTCTTTCTTGAATCCATACGACAATGTTAGTAGTTACAGAACTTGTGAAACACTTGGACAGGCTAAACCAGAGACCGTGGATAAGGTGGTTGAGATCGTGAGGAAACAGCTTGCTGTAGCTGCAGATTCTCAGATCTGTGGAGCAACAAAGTTTGCTGACCTCGGAGCTGATTCTCTTGATACGGTAACAAATATCTAACCAATATTGTGCCTTCATGTATTAATACTTGTTCGATATAATTTTAGGATGTTATGCCATTTTCATTGCTAAGTTATCATCCATCAATAGTAGCGTCCGCAAGTTAATTATTACGTATTATTTGGGTGCTGTTTGATTTCGTTTTCTGTGAAAATAGGATGGATTGAATTCGTTCAGTTTTCAAAAATGTTTTTGAAATGGTAAGCAAATTTTAAAACCGAAAAACAAGTTTTTAAGAATAATTTCTGTTATCCAAAATTCTACTTCTCCCCACATACAATCTTTCTCCCTTTATCATATATATGTTCTCTCAAACATTTCCTTTCCCAATTTACTTTTCTCTCTATATTCTTTTTTCCTTTAACTTTTCTCTCTCATACTCGTGTCTGTCTAAAGTTCCTCTTTTTCTCAAACTTTTTGAAATTTTCTCTCCATAACTGCTTTCCCTCTCTAATATTTCTTCTTCTCCATCAATTTTCTCTTTCTAACTTTGTAGAATCTCTCTCTCTGAAGCATATTTCCTCTCTCAAATATTTGTTTTATAAACGTGAATGTAAAACAAATATTAAAATAAGATCATTAAGATCATAAACTATTGACAAACATGTTTTGCTTGTCCATTTCTGAAGTAGTTATCTAGCATTTTTTGTTTTAAATAAACTGGAAATTAAACATAAAACATAATAACCGAAAATTAAAAGCAAAAAATGGTATGAAAAGCTTGTATGAGCTGTAACTATTTCAGTTGCCTTGATTGTTGTTGAACTAAAATAATAATAATAATAATAATCCTTATTTTAATGGAAGACGTGTTTAAAAAGAAATTTTATTTGGCGTGATGTTTCTTTAAAAGGTTTTCAATTTTATTTTATTTTTTTATACATATTTCATTTTCATCCCTCAAAATGGTCTTGTGTTCCTTGGATTATGTATGAATTTATTAAGTCATTATAGGTAATTTTTCATTTTTCATTTTAAATTCGTGTTGACTTACTGCATTTTAAATACAGGTCCACGTAGGATTTTTTAAAGAAAAAAAAATCAAAGAAAGCAATAAAAGTTGTTCTGACTAAGACGAATAGCTAATGTTAAAAGCAAAATTAAATACAATGACAAATGGTTTTTAGAACCAAAATAATAAACATGCAAATTTGAACACTAGAATCAGATTAAATTTTTTATTAAAAAAATAGTAGAAAAATAGGATCAGTATTTTTAACATTTTTATGAAAGTTGGAGATGTATTCTGAAAGTACATTTGAAAGGCCAGTAATCTTTGTGTGTATATTTCTGTCGAACTTTGACTTAGGTTGTTTTTTATTCAACAACAAAATGTTTTGGTAGAGCATATAATAAGCTTATTAACTAGTGAGCGGTCAACTTAGGTTTTATACTATTGAAGGCTAAAATTAAGTGTATCAATTTACACCCATTGTTGGATTTCTTTTGAAAAACATTAGATCACATGTGTAGATTCATAATGGTATCTATCAAACTCTTTGAACATTCATAAGTCAATTAATTTATAAATCAATTTATATCCTCAATTTAAAAATCATCCCTGTAGACTTTTTTTTGAAGAAATTTAGATTCTCTATTTGAAAATTGTCATGCGTTTGAAAATTTTAAAGAGTTTATTATATAATTGTAAGTTTGCACAATTTCATCCAGAATTTACCAAGAGGGTGTAAATTGGTACAATTAAAGTCCCGTTTGATAACCATTTCGTTTTTAGTTTTTAGTTTTTGAAAATTGTATTTTTTCTCTTAATCTTCTTACAATGGTTTTATTTTTGTCTTAATCCTCTTACAATAGTTTTCATTTTTGTCAAGAAGACATTTGAGTTCCTAACCAAATTTCAAAAACAAAAAACAAGTTTTTGAAAACTATTTTTTTTTTATTTTTTTAATTTGGCTTGGTTTTTGAAAATATGGGAAAGGATGTAGATAACCAACAAGTAAGTAGAAACAATGTTTATAAGCTTAATTTTCAAAAACAAAAAACAAAATTATTACCAAACGGAGTCTAAATTATTAGTTTATAATTTTAATTGATATAACCTTCAAAATTAGAGATGTAAATTAATTTTTGCCGTCGAATTAACAGAGTTGTTATTGTATTGAATGGATGTAGGTTGAGATTGTGATGGGACTGGAAGAGGAATTCCACATCTGTGTGGAAGAAGAGAGCGCCCAAAGCATCAGCACCGTCCAAGATGCTGCAGATCTCATCGAGTCTCTCATTGCCGAGGGAGCTCAGAAGCCCTCTGCTTAATTTGCAATTTTATTTGTAATTCAGTCCTTATTTTAGATTTCTTTTTTAGATCTCTCTCTCTCTCTCTCTTCCCTTCCGTTTGGATTTTGCTAGCTTCCTCCACCATCCTCATCTATTTCTTTGTTTTTCTTTTCCTTTTAAAAACTTTCTTAAATATCTAGAACAACAACATTTCTGCATGGCCTCATTTACACTCCAAAACTAAAGTCCCCGTGTGAGAATTTTGGATCAGTCATATTTATTTTCCTTATTATTAAACAAGTTTCTAGAATGTTCC

mRNA sequence

ATGTTCTCCATTGCTGGATCTTCGGTTTCCATGTCTTCTCTCTCCGCCTCTTTCAAGCAGAGCCAGGTGTCTAGCGGAAGGATTTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGTAGGGCCAGTTTTCCCTTGCGAAGGAGCTTCAGGCAGAGAAGCCTTCAGGTTTGCAGTGCGGCTAAACCAGAGACCGTGGATAAGGTGGTTGAGATCGTGAGGAAACAGCTTGCTGTAGCTGCAGATTCTCAGATCTGTGGAGCAACAAAGTTTGCTGACCTCGGAGCTGATTCTCTTGATACGGTTGAGATTGTGATGGGACTGGAAGAGGAATTCCACATCTGTGTGGAAGAAGAGAGCGCCCAAAGCATCAGCACCGTCCAAGATGCTGCAGATCTCATCGAGTCTCTCATTGCCGAGGGAGCTCAGAAGCCCTCTGCTTAA

Coding sequence (CDS)

ATGTTCTCCATTGCTGGATCTTCGGTTTCCATGTCTTCTCTCTCCGCCTCTTTCAAGCAGAGCCAGGTGTCTAGCGGAAGGATTTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGTAGGGCCAGTTTTCCCTTGCGAAGGAGCTTCAGGCAGAGAAGCCTTCAGGTTTGCAGTGCGGCTAAACCAGAGACCGTGGATAAGGTGGTTGAGATCGTGAGGAAACAGCTTGCTGTAGCTGCAGATTCTCAGATCTGTGGAGCAACAAAGTTTGCTGACCTCGGAGCTGATTCTCTTGATACGGTTGAGATTGTGATGGGACTGGAAGAGGAATTCCACATCTGTGTGGAAGAAGAGAGCGCCCAAAGCATCAGCACCGTCCAAGATGCTGCAGATCTCATCGAGTCTCTCATTGCCGAGGGAGCTCAGAAGCCCTCTGCTTAA

Protein sequence

MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAAKPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESAQSISTVQDAADLIESLIAEGAQKPSA

Homology

[Close]

BLAST of Spg023253 vs. NCBI nr
Match: XP_022138574.1 (acyl carrier protein 1, chloroplastic-like isoform X2 [Momordica charantia])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 113/146 (77.40%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFS+AGSSVSM SLSASFKQ Q SSGRIS LKLVS P GRAS+PL+RS+RQ  LQVC AA
Sbjct: 1   MFSVAGSSVSMPSLSASFKQIQASSGRISSLKLVSVPFGRASYPLQRSYRQGRLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETVDKVVEIVRKQLA+AADS + G +KF++LGADSLDTVEIVMGLEEEF I VEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAADSNVNGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSISTVQDAADLIESLIAEGAQKPSA 147
            +I+TVQDAADLIESL+A+     SA
Sbjct: 121 STITTVQDAADLIESLMAQDDDNKSA 146

[Close]

BLAST of Spg023253 vs. NCBI nr
Match: XP_023000274.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 197.2 bits (500), Expect = 9.8e-47
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFSIAGSSVSM SLS S K SQVSSGRISGLKLVSAP  RASFPLRRS+RQRSLQVC AA
Sbjct: 1   MFSIAGSSVSMPSLSTSLKHSQVSSGRISGLKLVSAPSSRASFPLRRSYRQRSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETV+KV  IVRKQLA++ DS++ G +KF++LGADSLDTVEIVMGLEEEF I VEEESA
Sbjct: 61  KPETVEKVAGIVRKQLALSEDSKVNGESKFSELGADSLDTVEIVMGLEEEFDISVEEESA 120

Query: 121 QSISTVQDAADLIESLIAE 140
           QSI+TVQ+AADLIE+LI++
Sbjct: 121 QSITTVQEAADLIETLISK 139

[Close]

BLAST of Spg023253 vs. NCBI nr
Match: XP_023547704.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6575046.1 Acyl carrier protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013622.1 Acyl carrier protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-46
Identity = 109/146 (74.66%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFSIAGSSVSM S+SASFK SQVS+GRISGLKLVSAPLG+A FPLRR+FRQ SLQVC AA
Sbjct: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPET+DKVV+IV+KQLA+  DS + G +KF++LGADSLDTVEIVMGLEE F I VEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QSISTVQDAADLIESLIAEGAQKPSA 147
           Q+I+TVQ+AAD+IE++I++   KP+A
Sbjct: 121 QTITTVQEAADMIETIISKDGPKPAA 146

[Close]

BLAST of Spg023253 vs. NCBI nr
Match: XP_008458496.1 (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo] >KAA0033459.1 acyl carrier protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-46
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFSIAGSSVSM SLSASF QSQV+SG+ISGLKLV APLG+A FPLRR++RQ SLQVC AA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETV+KVVEIVRKQLA+  DS++ G +KF DLGADSLDTVEIVMGLEEEF I VEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSISTVQDAADLIESLIAE 140
           QSI+TVQ+AADLIE LI++
Sbjct: 121 QSITTVQEAADLIEDLISK 139

[Close]

BLAST of Spg023253 vs. NCBI nr
Match: XP_022138573.1 (acyl carrier protein 1, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-46
Identity = 113/147 (76.87%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQ-SQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSA 60
           MFS+AGSSVSM SLSASFKQ  Q SSGRIS LKLVS P GRAS+PL+RS+RQ  LQVC A
Sbjct: 1   MFSVAGSSVSMPSLSASFKQIQQASSGRISSLKLVSVPFGRASYPLQRSYRQGRLQVCCA 60

Query: 61  AKPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEES 120
           AKPETVDKVVEIVRKQLA+AADS + G +KF++LGADSLDTVEIVMGLEEEF I VEEES
Sbjct: 61  AKPETVDKVVEIVRKQLALAADSNVNGESKFSELGADSLDTVEIVMGLEEEFKISVEEES 120

Query: 121 AQSISTVQDAADLIESLIAEGAQKPSA 147
           A +I+TVQDAADLIESL+A+     SA
Sbjct: 121 ASTITTVQDAADLIESLMAQDDDNKSA 147

[Close]

BLAST of Spg023253 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 85/138 (61.59%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPL-GRASFPLRRSFRQRSLQVCSA 60
           M S+ G+S+SM+S  AS   S     R+S L+ VS P+ G++  PLR   R     VC A
Sbjct: 1   MASVTGTSISMASFKASLAPS-----RVSNLRSVSLPIKGKSFAPLR--MRSARFVVCCA 60

Query: 61  AKPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEES 120
           AKPETV+KV  IV+KQLA+  DS + G +KFA LGADSLDTVEIVMGLEEEF I VEEES
Sbjct: 61  AKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEES 120

Query: 121 AQSISTVQDAADLIESLI 138
           AQSI+TVQDAADLIE LI
Sbjct: 121 AQSIATVQDAADLIEKLI 131

[Close]

BLAST of Spg023253 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.3e-29
Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 5   AGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAAKPET 64
           AG+S+ + S S     S ++ GRIS L+ VS P+ R SFP  RS +    +V   AKPET
Sbjct: 6   AGASICIKSASC----SPLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPET 65

Query: 65  VDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESAQSIS 124
           V KV  IV+KQLA+  DS++ G +KF+ LGADSLDTVEIVMGLEEEF I VEEESAQSI 
Sbjct: 66  VAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQ 125

Query: 125 TVQDAADLIESLI 138
           TVQDAADLIE L+
Sbjct: 126 TVQDAADLIEKLM 134

[Close]

BLAST of Spg023253 vs. ExPASy Swiss-Prot
Match: P52413 (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 82/135 (60.74%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 5   AGSS-VSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFR-QRSLQVCSAAKP 64
           AGSS + + S S S  ++QV SG +S L+ VS P+    FP  RS R   S +VC  AK 
Sbjct: 6   AGSSLICIKSASCSLNRAQVPSG-LSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQ 65

Query: 65  ETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESAQS 124
           ETV +V EIV+KQLA+  DS++ G +KF+ LGADSLDTVEIVMGLEEEF I VEEESAQS
Sbjct: 66  ETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQS 125

Query: 125 ISTVQDAADLIESLI 138
           I TVQDAADLIE L+
Sbjct: 126 IQTVQDAADLIEKLV 139

[Close]

BLAST of Spg023253 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-28
Identity = 82/134 (61.19%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 5   AGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFP-LRRSFRQRSLQVCSAAKPE 64
           A +  S+   SASF  S ++ GRIS L+ VS P+ R SFP L+ S    +L+V   AKPE
Sbjct: 4   AAAGASICIKSASF--SPLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPE 63

Query: 65  TVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESAQSI 124
           TV KV  IV+KQLA+  DS++ G +KF+ LGADSLDTVEIVMGLEEEF I VEEESAQSI
Sbjct: 64  TVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSI 123

Query: 125 STVQDAADLIESLI 138
            TVQDAADLIE L+
Sbjct: 124 QTVQDAADLIEKLM 135

[Close]

BLAST of Spg023253 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-27
Identity = 80/131 (61.07%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 7   SSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAAKPETVD 66
           SS+ + S S     S ++ GRIS L+ VS P+ R SF  RR     SL+V   AKPETV 
Sbjct: 8   SSICIKSASC----SALAPGRISSLRSVSLPVSRKSFFSRRG--SFSLRVNCQAKPETVT 67

Query: 67  KVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESAQSISTV 126
           KV  IV+KQLA+  DS + G +KF+ LGADSLDTVEIVMGLEEEF I VEEESAQSI TV
Sbjct: 68  KVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTV 127

Query: 127 QDAADLIESLI 138
           QDAADLIE L+
Sbjct: 128 QDAADLIEKLM 132

[Close]

BLAST of Spg023253 vs. ExPASy TrEMBL
Match: A0A6J1CAG9 (Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111009698 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.6e-48
Identity = 113/146 (77.40%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFS+AGSSVSM SLSASFKQ Q SSGRIS LKLVS P GRAS+PL+RS+RQ  LQVC AA
Sbjct: 1   MFSVAGSSVSMPSLSASFKQIQASSGRISSLKLVSVPFGRASYPLQRSYRQGRLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETVDKVVEIVRKQLA+AADS + G +KF++LGADSLDTVEIVMGLEEEF I VEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAADSNVNGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSISTVQDAADLIESLIAEGAQKPSA 147
            +I+TVQDAADLIESL+A+     SA
Sbjct: 121 STITTVQDAADLIESLMAQDDDNKSA 146

[Close]

BLAST of Spg023253 vs. ExPASy TrEMBL
Match: A0A6J1KJG2 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111494553 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.7e-47
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFSIAGSSVSM SLS S K SQVSSGRISGLKLVSAP  RASFPLRRS+RQRSLQVC AA
Sbjct: 1   MFSIAGSSVSMPSLSTSLKHSQVSSGRISGLKLVSAPSSRASFPLRRSYRQRSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETV+KV  IVRKQLA++ DS++ G +KF++LGADSLDTVEIVMGLEEEF I VEEESA
Sbjct: 61  KPETVEKVAGIVRKQLALSEDSKVNGESKFSELGADSLDTVEIVMGLEEEFDISVEEESA 120

Query: 121 QSISTVQDAADLIESLIAE 140
           QSI+TVQ+AADLIE+LI++
Sbjct: 121 QSITTVQEAADLIETLISK 139

[Close]

BLAST of Spg023253 vs. ExPASy TrEMBL
Match: A0A5A7SWA3 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001200 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.2e-47
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFSIAGSSVSM SLSASF QSQV+SG+ISGLKLV APLG+A FPLRR++RQ SLQVC AA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETV+KVVEIVRKQLA+  DS++ G +KF DLGADSLDTVEIVMGLEEEF I VEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSISTVQDAADLIESLIAE 140
           QSI+TVQ+AADLIE LI++
Sbjct: 121 QSITTVQEAADLIEDLISK 139

[Close]

BLAST of Spg023253 vs. ExPASy TrEMBL
Match: A0A1S3C7Z5 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103497888 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.2e-47
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFSIAGSSVSM SLSASF QSQV+SG+ISGLKLV APLG+A FPLRR++RQ SLQVC AA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETV+KVVEIVRKQLA+  DS++ G +KF DLGADSLDTVEIVMGLEEEF I VEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSISTVQDAADLIESLIAE 140
           QSI+TVQ+AADLIE LI++
Sbjct: 121 QSITTVQEAADLIEDLISK 139

[Close]

BLAST of Spg023253 vs. ExPASy TrEMBL
Match: A0A0A0K8V5 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_6G067970 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.1e-47
Identity = 111/139 (79.86%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           MFSIAGSSVSM SLSAS  +SQV+SGRISGLKLV APLG+A FPLRR++R  SLQVC AA
Sbjct: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETVDKVVEIVRKQLA+A DS++ G +KF DLGADSLDTVEIVMGLEEEF I VEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QSISTVQDAADLIESLIAE 140
           QSI+TVQ+AADLIE LI++
Sbjct: 121 QSITTVQEAADLIEDLISK 139

[Close]

BLAST of Spg023253 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 109.8 bits (273), Expect = 1.9e-24
Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 13  SLSASFKQSQVSSGRISGLK---LVSAPLGRASFPLRRSFRQRSLQVCSAAKPETVDKVV 72
           S S S + S +++ RIS  K   + +      SF LRRS   R L V  AAK ET++KV 
Sbjct: 6   SASVSLQTSCLATTRISFQKPALISNHGKTNLSFNLRRSIPSRRLSVSCAAKQETIEKVS 65

Query: 73  EIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESAQSISTVQDA 132
            IV+KQL++  D ++   TKFADLGADSLDTVEIVMGLEEEF+I + EE AQ I+TV+ A
Sbjct: 66  AIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQKIATVEQA 125

Query: 133 ADLIESLIAE 140
           A+LIE LI E
Sbjct: 126 AELIEELINE 135

[Close]

BLAST of Spg023253 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 101.3 bits (251), Expect = 6.8e-22
Identity = 59/98 (60.20%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 42  SFPLRRSFRQRSLQVCSAAKPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTV 101
           SF LRR    R L V  A K ETV+KV EIV+KQL++  D ++   TKF +LGADSLDTV
Sbjct: 40  SFSLRRLMPAR-LAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTV 99

Query: 102 EIVMGLEEEFHICVEEESAQSISTVQDAADLIESLIAE 140
           EIVMGLEEEF I + EE A+ I+TVQ AA+LIE L+ E
Sbjct: 100 EIVMGLEEEFGITMAEERAKEIATVQQAAELIEELVQE 136

[Close]

BLAST of Spg023253 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 65/137 (47.45%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 10  SMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAAKPETVDKVV 69
           S+S+ S SFK    +  ++  L+  S+           S +   LQ+  AAK ETV KV 
Sbjct: 3   SLSTTSLSFKAPSTTISQV--LRKASSSQSVTFGRFTSSTKSLRLQISCAAKAETVQKVS 62

Query: 70  EIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESAQSISTVQDA 129
           +IV++QLA+AAD  +   +KF+ LGADSLDTVEIVM LEE+F+I VEE  AQ+I+T+Q+A
Sbjct: 63  DIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQEA 122

Query: 130 ADLIESLIAEGAQKPSA 147
           ADLIE L+    +KP+A
Sbjct: 123 ADLIEDLV---QKKPAA 134

[Close]

BLAST of Spg023253 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 )

HSP 1 Score: 97.4 bits (241), Expect = 9.8e-21
Identity = 72/142 (50.70%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           M SIA S  +  SL A  +Q  +++ ++      +      SF LR+      L V  AA
Sbjct: 1   MASIAAS--ASISLQARPRQLAIAASQVKSFS--NGRRSSLSFNLRQ--LPTRLTVSCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETVDKV  +VRKQL++    +I  ATKFA LGADSLDTVEIVMGLEEEF I + EE A
Sbjct: 61  KPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKA 120

Query: 121 QSISTVQDAADLIESLIAEGAQ 143
           QSI+TV+ AA LIE L+ E A+
Sbjct: 121 QSIATVEQAAALIEELLFEKAK 136

[Close]

BLAST of Spg023253 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 )

HSP 1 Score: 97.4 bits (241), Expect = 9.8e-21
Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 1   MFSIAGSSVSMSSLSASFKQSQVSSGRISGLKLVSAPLGRASFPLRRSFRQRSLQVCSAA 60
           M SIA S  + +SL A  +Q  + + ++      S      SF LR+      L V  AA
Sbjct: 1   MASIATS--ASTSLQARPRQLVIGAKQVKSFSYGSR--SNLSFNLRQ--LPTRLTVYCAA 60

Query: 61  KPETVDKVVEIVRKQLAVAADSQICGATKFADLGADSLDTVEIVMGLEEEFHICVEEESA 120
           KPETVDKV  +VRKQL++    +I  ATKFA LGADSLDTVEIVMGLEEEF I + EE A
Sbjct: 61  KPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEKA 120

Query: 121 QSISTVQDAADLIESLIAEGAQ 143
           QSI+TV+ AA LIE L+ E A+
Sbjct: 121 QSIATVEQAAALIEELLLEKAK 136

The following BLAST results are available for this feature:

BLAST of Spg023253 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138574.1	1.2e-47	77.40	acyl carrier protein 1, chloroplastic-like isoform X2 [Momordica charantia]	[more]
XP_023000274.1	9.8e-47	79.86	acyl carrier protein 1, chloroplastic-like [Cucurbita maxima]	[more]
XP_023547704.1	1.3e-46	74.66	acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6575...	[more]
XP_008458496.1	1.3e-46	79.86	PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo] >KAA0033459...	[more]
XP_022138573.1	1.7e-46	76.87	acyl carrier protein 1, chloroplastic-like isoform X1 [Momordica charantia]	[more]

BLAST of Spg023253 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93092	1.7e-30	61.59	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
P52414	3.3e-29	60.15	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]
P52413	1.2e-28	60.74	Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=...	[more]
P52411	2.1e-28	61.19	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
P52412	2.4e-27	61.07	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]

BLAST of Spg023253 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAG9	5.6e-48	77.40	Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111009698 PE=3 SV=1	[more]
A0A6J1KJG2	4.7e-47	79.86	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111494553 PE=3 SV=1	[more]
A0A5A7SWA3	6.2e-47	79.86	Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111...	[more]
A0A1S3C7Z5	6.2e-47	79.86	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103497888 PE=3 SV=1	[more]
A0A0A0K8V5	8.1e-47	79.86	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_6G067970 PE=3 SV=1	[more]

BLAST of Spg023253 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05020.1	1.9e-24	53.85	acyl carrier protein 1	[more]
AT5G27200.1	6.8e-22	60.20	acyl carrier protein 5	[more]
AT4G25050.1	1.5e-21	47.45	acyl carrier protein 4	[more]
AT1G54580.1	9.8e-21	50.70	acyl carrier protein 2	[more]
AT1G54630.1	9.8e-21	51.41	acyl carrier protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 60..139 e-value: 4.1E-23 score: 83.3
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 61..141
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 66..133 e-value: 5.2E-9 score: 36.3
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 62..137 score: 20.445688
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 63..135 e-value: 3.5E-24 score: 82.5
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 63..137 score: 16.563692
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 7..139
None	No IPR available	PANTHER	PTHR46153:SF20	ACYL CARRIER PROTEIN 2, CHLOROPLASTIC-RELATED	coord: 7..139
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 92..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023253.1	Spg023253.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0031177	phosphopantetheine binding