Spg023229 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023229
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Glucose-1-phosphate adenylyltransferase
Location	scaffold13: 2690472 .. 2691401 (-)
RNA-Seq Expression	Spg023229
Synteny	Spg023229

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGACGAGATGGTAGCCTGCGCCGATGGCCGAGTTTCGCTCTCGGCGGCTGCGAACTTGCACGGAGCAATGGCATTGCAGAAAATCAGGAACTCGAAGCTGCAGGTGAGGTTCAGTAATGGAGAATTTATGGGGAAGAAGCTAGTTGCATTGCAACGGAGGAAGCAAGATGTTACTGACATTCCAAATGCCAGACGGAAAGTTTGTATGTCTCTTATTGCCAATATAGCGGCTGAATCCAAGGCAAGCTAATAATGCAAGTCTCTTTCGAAATTTTTTGTTGAATATGTTTTTGGAAAAGAATCTGCGAACTTCTGGACTGGAATTTGAGGTTTTGGCGGTGGTTTAATGTGTAGTTGAGGGAATTGAACATGGAGAAACGTGACCCGAGGACGGTGGTGGCGGTTATATTGGGAGGTGGAGCTGGTACTCGTTTGTTCCCGCTCACGAAGCAGAGAGCTAAACCGGCGGTGATTATTGGCTCCTTTTGAATCTGTTCTTATCGGATTTGTTGATGTCTTCTCTTTGATTCTTTACGAATTGCAGGTTCCGATCGGCGGAGCTTACCGGCTGATTGATGTGCCGATGAGCAATTGCATAAACAGTGGAATCAACAAAGTTTACATACTCACGCAGTTCAATTCCGCATCGCTCAACAGGCATCTCGCTCGCGCGTACAACTTCGGTAGCGGAGTCACCTTAGGAGACGGTTTCGTTGAGGTCAGTTCTTAATTCTTTATGTCGATTCATCGTTTTGCATTTTCCAGGAAAACATAAGAACGGTGAAAGATTCAGATGAGATTCTTGTTATTATCCCCGCAGGTTCTCGCGGCGACTCAAACTCCGGGAGAGGCCGGGAAGCGGTGGTTCCAGGGGACTGCCGATGCCGTACGACAGTTCCATTGGCTTTTTGAGGTATTTAGAAATTAG

mRNA sequence

TCCGACGAGATGGTAGCCTGCGCCGATGGCCGAGTTTCGCTCTCGGCGGCTGCGAACTTGCACGGAGCAATGGCATTGCAGAAAATCAGGAACTCGAAGCTGCAGGTGAGGTTCAGTAATGGAGAATTTATGGGGAAGAAGCTAGTTGCATTGCAACGGAGGAAGCAAGATGTTACTGACATTCCAAATGCCAGACGGAAATTGAGGGAATTGAACATGGAGAAACGTGACCCGAGGACGGTGGTGGCGGTTATATTGGGAGGTGGAGCTGGTACTCGTTTGTTCCCGCTCACGAAGCAGAGAGCTAAACCGGCGGTTCCGATCGGCGGAGCTTACCGGCTGATTGATGTGCCGATGAGCAATTGCATAAACAGTGGAATCAACAAAGTTTACATACTCACGCAGTTCAATTCCGCATCGCTCAACAGGCATCTCGCTCGCGCGTACAACTTCGGTAGCGGAGTCACCTTAGGAGACGGTTTCGTTGAGGTTCTCGCGGCGACTCAAACTCCGGGAGAGGCCGGGAAGCGGTGGTTCCAGGGGACTGCCGATGCCGTACGACAGTTCCATTGGCTTTTTGAGGTATTTAGAAATTAG

Coding sequence (CDS)

TCCGACGAGATGGTAGCCTGCGCCGATGGCCGAGTTTCGCTCTCGGCGGCTGCGAACTTGCACGGAGCAATGGCATTGCAGAAAATCAGGAACTCGAAGCTGCAGGTGAGGTTCAGTAATGGAGAATTTATGGGGAAGAAGCTAGTTGCATTGCAACGGAGGAAGCAAGATGTTACTGACATTCCAAATGCCAGACGGAAATTGAGGGAATTGAACATGGAGAAACGTGACCCGAGGACGGTGGTGGCGGTTATATTGGGAGGTGGAGCTGGTACTCGTTTGTTCCCGCTCACGAAGCAGAGAGCTAAACCGGCGGTTCCGATCGGCGGAGCTTACCGGCTGATTGATGTGCCGATGAGCAATTGCATAAACAGTGGAATCAACAAAGTTTACATACTCACGCAGTTCAATTCCGCATCGCTCAACAGGCATCTCGCTCGCGCGTACAACTTCGGTAGCGGAGTCACCTTAGGAGACGGTTTCGTTGAGGTTCTCGCGGCGACTCAAACTCCGGGAGAGGCCGGGAAGCGGTGGTTCCAGGGGACTGCCGATGCCGTACGACAGTTCCATTGGCTTTTTGAGGTATTTAGAAATTAG

Protein sequence

SDEMVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTDIPNARRKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEVFRN

Homology

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BLAST of Spg023229 vs. NCBI nr
Match: XP_022138307.1 (glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like [Momordica charantia])

HSP 1 Score: 334.0 bits (855), Expect = 9.1e-88
Identity = 176/210 (83.81%), Postives = 184/210 (87.62%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTD-IP 63
           MVACADGRVSLSAAA+LH AMAL KI NSKLQVRF NGEFMG+KL  LQ+RKQ+ T+ IP
Sbjct: 1   MVACADGRVSLSAAAHLHAAMALPKITNSKLQVRFCNGEFMGRKL-TLQQRKQNFTNIIP 60

Query: 64  NARR--------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI 123
           N RR              KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI
Sbjct: 61  NVRRKVRMSLIANIAAESKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI 120

Query: 124 GGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAAT 183
           GGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFGSGVTLGDG++EVLAAT
Sbjct: 121 GGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGSGVTLGDGYIEVLAAT 180

Query: 184 QTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           QTPGEAGKRWFQGTADAVRQFHWLFE  R+
Sbjct: 181 QTPGEAGKRWFQGTADAVRQFHWLFEDARS 209

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BLAST of Spg023229 vs. NCBI nr
Match: KAG6575005.1 (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.0 bits (824), Expect = 3.6e-84
Identity = 169/211 (80.09%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTDIPN 63
           MVA  DGRVS S AA+LHGAMALQKIR+S LQVRF NGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 64  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 123
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 124 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAA 183
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 184 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           TQTPG+AGK+WFQGTADAVRQFHWLFEVF N
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEVFIN 210

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BLAST of Spg023229 vs. NCBI nr
Match: XP_023006436.1 (glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like [Cucurbita maxima])

HSP 1 Score: 318.9 bits (816), Expect = 3.0e-83
Identity = 168/211 (79.62%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTDIPN 63
           MVA  DGRVS SAAA+LHGAMALQKIR+S LQVRF NGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSAAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 64  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 123
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 124 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAA 183
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 184 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

[Close]

BLAST of Spg023229 vs. NCBI nr
Match: XP_023547369.1 (glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.4 bits (812), Expect = 8.8e-83
Identity = 167/211 (79.15%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTDIPN 63
           MVA  DGRVS S AA+LHGAMALQKIR+S LQVRF NGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 64  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 123
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 124 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAA 183
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 184 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

[Close]

BLAST of Spg023229 vs. NCBI nr
Match: XP_022959380.1 (glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like [Cucurbita moschata] >KAG7013576.1 Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.4 bits (812), Expect = 8.8e-83
Identity = 167/211 (79.15%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTDIPN 63
           MVA  DGRVS S AA+LHGAMALQKIR+S LQVRF NGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 64  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 123
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 124 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAA 183
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 184 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

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BLAST of Spg023229 vs. ExPASy Swiss-Prot
Match: P55229 (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADG2 PE=1 SV=3)

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-63
Identity = 137/209 (65.55%), Postives = 156/209 (74.64%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQR---RKQDVTD 63
           MV  AD R+SLSA + +  + +    R+ KL   F NGE MGKKL   Q    R +  T+
Sbjct: 1   MVVSADCRISLSAPSCIRSS-STGLTRHIKLG-SFCNGELMGKKLNLSQLPNIRLRSSTN 60

Query: 64  IPNAR-----------RKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIG 123
               R            K++EL  EKRDPRTV ++ILGGGAGTRLFPLTK+RAKPAVPIG
Sbjct: 61  FSQKRILMSLNSVAGESKVQELETEKRDPRTVASIILGGGAGTRLFPLTKRRAKPAVPIG 120

Query: 124 GAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQ 183
           GAYRLIDVPMSNCINSGINKVYILTQ+NSASLNRHLARAYN  +G+  GDG+VEVLAATQ
Sbjct: 121 GAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYN-SNGLGFGDGYVEVLAATQ 180

Query: 184 TPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           TPGE+GKRWFQGTADAVRQFHWLFE  R+
Sbjct: 181 TPGESGKRWFQGTADAVRQFHWLFEDARS 206

[Close]

BLAST of Spg023229 vs. ExPASy Swiss-Prot
Match: P55243 (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=AGPS3 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.0e-59
Identity = 114/141 (80.85%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 59  TDIPNARRKLRELNMEKR-DPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDV 118
           TDI     KL++L  +K+ D RTVVA+ILGGGAGTRLFPLTK+RAKPAVP+GGAYRLIDV
Sbjct: 27  TDIA-GEAKLKDLERQKKGDARTVVAIILGGGAGTRLFPLTKRRAKPAVPMGGAYRLIDV 86

Query: 119 PMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKR 178
           PMSNCINSGINKVYILTQFNSASLNRH+ARAYNFG+GVT   G+VEVLAATQTPGE GKR
Sbjct: 87  PMSNCINSGINKVYILTQFNSASLNRHIARAYNFGNGVTFESGYVEVLAATQTPGELGKR 146

Query: 179 WFQGTADAVRQFHWLFEVFRN 199
           WFQGTA AVRQFHWLFE  R+
Sbjct: 147 WFQGTAHAVRQFHWLFEDARS 166

[Close]

BLAST of Spg023229 vs. ExPASy Swiss-Prot
Match: Q6AVT2 (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica OX=39947 GN=AGPL1 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-58
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 73  MEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYI 132
           +E RD +TVVAVILGGGAGTRLFPLTK+RAKPAVPIGGAYRLIDVPMSNCINSGINKVYI
Sbjct: 70  LEARDSKTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYI 129

Query: 133 LTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFHWL 192
           LTQFNSASLNRHL+RAYNF +GV  GDGFVEVLAATQTPG  GKRWFQGTADAVRQF WL
Sbjct: 130 LTQFNSASLNRHLSRAYNFSNGVAFGDGFVEVLAATQTPGSEGKRWFQGTADAVRQFDWL 189

Query: 193 FE 195
           F+
Sbjct: 190 FD 191

[Close]

BLAST of Spg023229 vs. ExPASy Swiss-Prot
Match: P55233 (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris OX=161934 GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.1e-54
Identity = 110/179 (61.45%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 22  GAMALQKIRNSKLQVRFSNGEFMGKKL----VALQRRKQDVTDIPNARRKLRELNME--K 81
           G    Q ++   L+  FS  E  G+ +    VA      D         K      E  K
Sbjct: 24  GERISQSLKGKDLRALFSRTESKGRNVNKPGVAFSVLTSDFNQSVKESLKYEPALFESPK 83

Query: 82  RDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ 141
            DP+ V A++LGGGAGTRLFPLT +RAKPAVPIGG YRLIDVPMSNCINSGI K++ILTQ
Sbjct: 84  ADPKNVAAIVLGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQ 143

Query: 142 FNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFE 195
           FNS SLNRHLAR YNFG GV  GDGFVEV AATQTPGE+GK+WFQGTADAVRQF W FE
Sbjct: 144 FNSFSLNRHLARTYNFGDGVNFGDGFVEVFAATQTPGESGKKWFQGTADAVRQFFWAFE 202

[Close]

BLAST of Spg023229 vs. ExPASy Swiss-Prot
Match: P55230 (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APL2 PE=1 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 3.4e-53
Identity = 96/124 (77.42%), Postives = 109/124 (87.90%), Query Frame = 0


Query: 71  LNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKV 130
           L  +  DP+ V ++ILGGGAGTRLFPLT +RAKPAVPIGG YRLID+PMSNCINSGI K+
Sbjct: 75  LRTQNADPKNVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKI 134

Query: 131 YILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFH 190
           +ILTQFNS SLNRHL+R YNFG+GV  GDGFVEVLAATQT G+AGK+WFQGTADAVRQF 
Sbjct: 135 FILTQFNSFSLNRHLSRTYNFGNGVNFGDGFVEVLAATQTSGDAGKKWFQGTADAVRQFI 194

Query: 191 WLFE 195
           W+FE
Sbjct: 195 WVFE 198

[Close]

BLAST of Spg023229 vs. ExPASy TrEMBL
Match: A0A6J1CAQ7 (Glucose-1-phosphate adenylyltransferase OS=Momordica charantia OX=3673 GN=LOC111009522 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.4e-88
Identity = 176/210 (83.81%), Postives = 184/210 (87.62%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTD-IP 63
           MVACADGRVSLSAAA+LH AMAL KI NSKLQVRF NGEFMG+KL  LQ+RKQ+ T+ IP
Sbjct: 1   MVACADGRVSLSAAAHLHAAMALPKITNSKLQVRFCNGEFMGRKL-TLQQRKQNFTNIIP 60

Query: 64  NARR--------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI 123
           N RR              KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI
Sbjct: 61  NVRRKVRMSLIANIAAESKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPI 120

Query: 124 GGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAAT 183
           GGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFGSGVTLGDG++EVLAAT
Sbjct: 121 GGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGSGVTLGDGYIEVLAAT 180

Query: 184 QTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           QTPGEAGKRWFQGTADAVRQFHWLFE  R+
Sbjct: 181 QTPGEAGKRWFQGTADAVRQFHWLFEDARS 209

[Close]

BLAST of Spg023229 vs. ExPASy TrEMBL
Match: A0A6J1KXS2 (Glucose-1-phosphate adenylyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111499163 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 168/211 (79.62%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTDIPN 63
           MVA  DGRVS SAAA+LHGAMALQKIR+S LQVRF NGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSAAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 64  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 123
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 124 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAA 183
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 184 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

[Close]

BLAST of Spg023229 vs. ExPASy TrEMBL
Match: A0A6J1H645 (Glucose-1-phosphate adenylyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111460369 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.3e-83
Identity = 167/211 (79.15%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQRRKQDVTDIPN 63
           MVA  DGRVS S AA+LHGAMALQKIR+S LQVRF NGE MGKKL  LQ+RK  V  IPN
Sbjct: 1   MVAGVDGRVSFSTAAHLHGAMALQKIRSSILQVRFCNGELMGKKL-TLQQRKHAVNYIPN 60

Query: 64  ARR----------------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVP 123
           ARR                KL+ELNMEK DPRTVVA++LGGGAGTRLFPLTKQRAKPAVP
Sbjct: 61  ARRKVRVSSLLANIAESESKLKELNMEKPDPRTVVAIVLGGGAGTRLFPLTKQRAKPAVP 120

Query: 124 IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAA 183
           IGGAYRLIDVPMSNCINSGINKVYILTQFNS SLNRHLARAYNFG GVTLGDG+VEVLAA
Sbjct: 121 IGGAYRLIDVPMSNCINSGINKVYILTQFNSTSLNRHLARAYNFGGGVTLGDGYVEVLAA 180

Query: 184 TQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           TQTPG+AGK+WFQGTADAVRQFHWLFE  R+
Sbjct: 181 TQTPGKAGKQWFQGTADAVRQFHWLFEDARS 210

[Close]

BLAST of Spg023229 vs. ExPASy TrEMBL
Match: A0A0A0KEY8 (Glucose-1-phosphate adenylyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G153460 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.9e-79
Identity = 162/200 (81.00%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 15  SAAANLHGAMALQKIRNSK-LQVRFSNGEFMGKKLVALQRRKQDVTDIPNARR------- 74
           SAAA+LH AMAL K+ NS  LQVRF NGEFMGKKL   Q+RKQ++  IPN +R       
Sbjct: 4   SAAAHLHTAMALHKVTNSNMLQVRFCNGEFMGKKL-TFQQRKQNINYIPNLKRKLCISSL 63

Query: 75  --------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 134
                   KLR LNMEKRD RTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP
Sbjct: 64  IADIAAESKLRGLNMEKRDSRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 123

Query: 135 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRW 194
           MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRW
Sbjct: 124 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRW 183

Query: 195 FQGTADAVRQFHWLFEVFRN 199
           FQGTADAVRQFHWLFE  R+
Sbjct: 184 FQGTADAVRQFHWLFEDARS 202

[Close]

BLAST of Spg023229 vs. ExPASy TrEMBL
Match: A0A5A7STU9 (Glucose-1-phosphate adenylyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00680 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.1e-78
Identity = 161/200 (80.50%), Postives = 170/200 (85.00%), Query Frame = 0


Query: 15  SAAANLHGAMALQKIRNSK-LQVRFSNGEFMGKKLVALQRRKQDVTDIPNARR------- 74
           SAAA+L+ AMALQKI NS  LQVRF NGEFMGKKL  LQ+ KQ++  +PN +R       
Sbjct: 4   SAAAHLYTAMALQKITNSNMLQVRFCNGEFMGKKL-KLQQTKQNINCVPNLKRKLCVSSL 63

Query: 75  --------KLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 134
                   KLR LNMEKRD RTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP
Sbjct: 64  IANIAAESKLRGLNMEKRDSRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 123

Query: 135 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRW 194
           MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGK+W
Sbjct: 124 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKQW 183

Query: 195 FQGTADAVRQFHWLFEVFRN 199
           FQGTADAVRQFHWLFE  R+
Sbjct: 184 FQGTADAVRQFHWLFEDARS 202

[Close]

BLAST of Spg023229 vs. TAIR 10
Match: AT5G19220.1 (ADP glucose pyrophosphorylase large subunit 1 )

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-64
Identity = 137/209 (65.55%), Postives = 156/209 (74.64%), Query Frame = 0


Query: 4   MVACADGRVSLSAAANLHGAMALQKIRNSKLQVRFSNGEFMGKKLVALQR---RKQDVTD 63
           MV  AD R+SLSA + +  + +    R+ KL   F NGE MGKKL   Q    R +  T+
Sbjct: 1   MVVSADCRISLSAPSCIRSS-STGLTRHIKLG-SFCNGELMGKKLNLSQLPNIRLRSSTN 60

Query: 64  IPNAR-----------RKLRELNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIG 123
               R            K++EL  EKRDPRTV ++ILGGGAGTRLFPLTK+RAKPAVPIG
Sbjct: 61  FSQKRILMSLNSVAGESKVQELETEKRDPRTVASIILGGGAGTRLFPLTKRRAKPAVPIG 120

Query: 124 GAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQ 183
           GAYRLIDVPMSNCINSGINKVYILTQ+NSASLNRHLARAYN  +G+  GDG+VEVLAATQ
Sbjct: 121 GAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYN-SNGLGFGDGYVEVLAATQ 180

Query: 184 TPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           TPGE+GKRWFQGTADAVRQFHWLFE  R+
Sbjct: 181 TPGESGKRWFQGTADAVRQFHWLFEDARS 206

[Close]

BLAST of Spg023229 vs. TAIR 10
Match: AT1G27680.1 (ADPGLC-PPase large subunit )

HSP 1 Score: 209.5 bits (532), Expect = 2.4e-54
Identity = 96/124 (77.42%), Postives = 109/124 (87.90%), Query Frame = 0


Query: 71  LNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKV 130
           L  +  DP+ V ++ILGGGAGTRLFPLT +RAKPAVPIGG YRLID+PMSNCINSGI K+
Sbjct: 75  LRTQNADPKNVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKI 134

Query: 131 YILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFH 190
           +ILTQFNS SLNRHL+R YNFG+GV  GDGFVEVLAATQT G+AGK+WFQGTADAVRQF 
Sbjct: 135 FILTQFNSFSLNRHLSRTYNFGNGVNFGDGFVEVLAATQTSGDAGKKWFQGTADAVRQFI 194

Query: 191 WLFE 195
           W+FE
Sbjct: 195 WVFE 198

[Close]

BLAST of Spg023229 vs. TAIR 10
Match: AT4G39210.1 (Glucose-1-phosphate adenylyltransferase family protein )

HSP 1 Score: 198.4 bits (503), Expect = 5.5e-51
Identity = 94/140 (67.14%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 63  NARRKLRE----LNMEKRDPRTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVP 122
           NA+  L+         + DP+ V A+ILGGG G +LFPLTK+ A PAVP+GG YR+ID+P
Sbjct: 67  NAKEALKNQPSMFERRRADPKNVAAIILGGGDGAKLFPLTKRAATPAVPVGGCYRMIDIP 126

Query: 123 MSNCINSGINKVYILTQFNSASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRW 182
           MSNCINS INK+++LTQFNSASLNRHLAR Y FG+G+  GDGFVEVLAATQTPGEAGK+W
Sbjct: 127 MSNCINSCINKIFVLTQFNSASLNRHLARTY-FGNGINFGDGFVEVLAATQTPGEAGKKW 186

Query: 183 FQGTADAVRQFHWLFEVFRN 199
           FQGTADAVR+F W+FE  +N
Sbjct: 187 FQGTADAVRKFLWVFEDAKN 205

[Close]

BLAST of Spg023229 vs. TAIR 10
Match: AT2G21590.1 (Glucose-1-phosphate adenylyltransferase family protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-50
Identity = 105/180 (58.33%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 27  QKIRNSKLQVRFSNGEFMGKKLVALQRRKQDV------TDIPNARRKLRELNMEKR--DP 86
           +K  N+ L  RF  G  +G K    Q+ K  V      +D P     ++    E+R  DP
Sbjct: 31  EKNNNNGLCKRF--GSDLGSKKFRNQKFKHGVVYAVATSDNPKKAMTVKTSMFERRKVDP 90

Query: 87  RTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNS 146
           + V A+ILGGG G +LFPLT + A PAVP+GG YRLID+PMSNCINS INK+++LTQFNS
Sbjct: 91  QNVAAIILGGGNGAKLFPLTMRAATPAVPVGGCYRLIDIPMSNCINSCINKIFVLTQFNS 150

Query: 147 ASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           ASLNRHLAR Y FG+G+  G GFVEVLAATQTPGEAGK+WFQGTADAVR+F W+FE  +N
Sbjct: 151 ASLNRHLARTY-FGNGINFGGGFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKN 207

[Close]

BLAST of Spg023229 vs. TAIR 10
Match: AT2G21590.2 (Glucose-1-phosphate adenylyltransferase family protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-50
Identity = 105/180 (58.33%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 27  QKIRNSKLQVRFSNGEFMGKKLVALQRRKQDV------TDIPNARRKLRELNMEKR--DP 86
           +K  N+ L  RF  G  +G K    Q+ K  V      +D P     ++    E+R  DP
Sbjct: 31  EKNNNNGLCKRF--GSDLGSKKFRNQKFKHGVVYAVATSDNPKKAMTVKTSMFERRKVDP 90

Query: 87  RTVVAVILGGGAGTRLFPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNS 146
           + V A+ILGGG G +LFPLT + A PAVP+GG YRLID+PMSNCINS INK+++LTQFNS
Sbjct: 91  QNVAAIILGGGNGAKLFPLTMRAATPAVPVGGCYRLIDIPMSNCINSCINKIFVLTQFNS 150

Query: 147 ASLNRHLARAYNFGSGVTLGDGFVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEVFRN 199
           ASLNRHLAR Y FG+G+  G GFVEVLAATQTPGEAGK+WFQGTADAVR+F W+FE  +N
Sbjct: 151 ASLNRHLARTY-FGNGINFGGGFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKN 207

The following BLAST results are available for this feature:

BLAST of Spg023229 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138307.1	9.1e-88	83.81	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]
KAG6575005.1	3.6e-84	80.09	Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic, partial ...	[more]
XP_023006436.1	3.0e-83	79.62	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]
XP_023547369.1	8.8e-83	79.15	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]
XP_022959380.1	8.8e-83	79.15	glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]

BLAST of Spg023229 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55229	2.1e-63	65.55	Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabid...	[more]
P55243	7.0e-59	80.85	Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplas...	[more]
Q6AVT2	4.6e-58	88.52	Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplas...	[more]
P55233	3.1e-54	61.45	Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplasti...	[more]
P55230	3.4e-53	77.42	Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabid...	[more]

BLAST of Spg023229 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAQ7	4.4e-88	83.81	Glucose-1-phosphate adenylyltransferase OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KXS2	1.5e-83	79.62	Glucose-1-phosphate adenylyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]
A0A6J1H645	4.3e-83	79.15	Glucose-1-phosphate adenylyltransferase OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0KEY8	4.9e-79	81.00	Glucose-1-phosphate adenylyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G1534...	[more]
A0A5A7STU9	4.1e-78	80.50	Glucose-1-phosphate adenylyltransferase OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Spg023229 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19220.1	1.5e-64	65.55	ADP glucose pyrophosphorylase large subunit 1	[more]
AT1G27680.1	2.4e-54	77.42	ADPGLC-PPase large subunit	[more]
AT4G39210.1	5.5e-51	67.14	Glucose-1-phosphate adenylyltransferase family protein	[more]
AT2G21590.1	1.2e-50	58.33	Glucose-1-phosphate adenylyltransferase family protein	[more]
AT2G21590.2	1.2e-50	58.33	Glucose-1-phosphate adenylyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	coord: 64..196 e-value: 8.7E-37 score: 129.0
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 80..193
IPR005835	Nucleotidyl transferase domain	PFAM	PF00483	NTP_transferase	coord: 83..194 e-value: 4.7E-31 score: 108.3
IPR011831	Glucose-1-phosphate adenylyltransferase	PANTHER	PTHR43523	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	coord: 3..197
None	No IPR available	PANTHER	PTHR43523:SF19	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE	coord: 3..197
IPR005836	ADP-glucose pyrophosphorylase, conserved site	PROSITE	PS00808	ADP_GLC_PYROPHOSPH_1	coord: 87..106
IPR005836	ADP-glucose pyrophosphorylase, conserved site	PROSITE	PS00809	ADP_GLC_PYROPHOSPH_2	coord: 178..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023229.1	Spg023229.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005978	glycogen biosynthetic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008878	glucose-1-phosphate adenylyltransferase activity
molecular_function	GO:0016779	nucleotidyltransferase activity