Spg023225 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023225
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	peroxisomal membrane protein PMP22
Location	scaffold13: 4443916 .. 4446065 (+)
RNA-Seq Expression	Spg023225
Synteny	Spg023225

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGATCCGCCGAGACAAAGACAGAGAGAGGGGTTGCGTCTGGGTCTTCCGGCGATCAAAGTCAAACACAGCCCCTTTTTGTATTTAATTTCGTTAATCCCACAGCTTTATTCTTCAAATCCCAATTTTCCATTCCAACAATTTCATCCTAAAATCTGAGAAAACCCCAAAACTCATCAAAGCTTCGATAAAAAATGTCCGATATAGTCACTGAAGCCTGGAAAGGATATCTCCTGCAACTTCGGAAGCACCCTCTCAGAACCAAGGTCAGTTCCATCTAATCAATCTCATCGAGTTTTTGTTGATTTCTAGTTAGATTATAACTTGTTCTTTTTGTAATTTAGGCAATCACTGCTGGGGTTTTGGCTGGTTGCAGCGATGCAGTGGCTCAGAAGATTTCTGGGGTTAAAAAGCTTCAATTGAGAAGATTACTTCTTTTAATGGTTGGTATTGTTCCATCGGTTATGATTTGGGGTTGATTCTCTGTTTTCATTCCCCCTTGTTTATAGTTGATCTAGAGGGGAATTGTTTCTTTCTCTGATGTTTAGTGTTTCTAAGATCCAAACAGGGGAGAAGTAGTGGTTGGTGGGAAGTGTTTGGCAATGATGTTTATTTGGTATGATTTTGAAGTTTTGAGTTATTGTTGTGTAGCTCTATGGCTTTGCTTATTCTGGACCATTTGGGCATTTTCTGCATAAGTTGATGGATAGAATTTTCAGGGGAAAGAAAGGCAACACAACTGTTGCAAAGAAGGTATGTTTTTCTTTGTAATTTCTGTCTGAGTTGTTTTCTGTGGTTTTATTGATGGGTGGAAGTAATTTGTTTCTTAGGTTTTATTGGAGCAATTGACTAGCTCTCCTTGGAACAATATGCTTTTCATGATGTACTATGGTTTGGTAGTTGAAGGTAAGACTTCGTTTGAGAACCATTTGGTTTTTTGGTTTTTGAAAATCATGCTTGTATCCCTACAATTTCCTTACAATGATTTTCAACTTTGTCAAAGACACGTTTGAGTTCCTAGCCAAATTCCAAAAACAAAAACAAGTTTTTGAAAACTACTCGTTTTAGTTTTCAAAACTTGACTTGGTTTTTTAAAATATGGAAAGAAGGTAGGTAGCAAAACAAAGAAACTTATTGGTAGAAGTAGTGTTTATAGGCATAATTTTCAAGAACCCAAAAACAAAAAACAAAATGGTTTTCAAAAGGGTCCTAAGCAATTCTACATTTTCTCTCTCTTTTTATCTTTCAGTTTTAATTACAGATGTTCTTTTCTGTTGTTGATGTTGTTGTTTATCTTCAACTTTGAATCCTGACTATCTCTTGAGCTGATGAGCTAATGTCTCTTAAACTAATTCAAGATTTCTGTACTTTTTTTGGTATGGTATCAGTCCAGTATGTACAAAAAAGATTTCAGCCAAATCTCAAAATTTTAAAACTGTAGTTTTATTTGAGCAAAACAATAGTTCATAAATGTCACGTTGACTAAAATGTTGGTTGGTAAGTCTTCAATGAACACATTGACAATAAGTCTCTAATTTCAGGAAGATCATGGAGTTTAGTCAAAAACAAACTTCGAAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGGTATGGAAAACAATTTTCTTTTCCTTTTCTTTAACTGTTAGAAATGAAGAAAGGCTATTAAATTAAATTAGATAACAAGAATGAGATGCTTATGACTTGCAGTTCTGGCCTATAGTTGGTTGGGTGAATTACCAGTACATGCCTCTGCAGTTTCGAGTGTTATTCCACAGCTTTGTTGCTTCATGCTGGTGAGATCATTCATCTTTTCTTTTTCCAACTGCCACCTTCATTACTTTTCAACTATTCCTGCAACAAAAAGGAGTTCAGAAAATCAAGAAAACAAAGATTGTATACACATAATCTGAGCATTAGAATTTAAACCATCTGACTTGATCATGTCACTTGTATAATGTCCATCCTAAATTGGAATCAGAGAAAAGAGAAACCGCTAACTCGTTGAACAGTCTTATCGATTGTAAAGATTTCGATCTTACGGGAAAATGAGGATCGTCAAAGCGATGTTGTTTGGGAAAATGTTGTGATTTGATCTTCTTAGTGCAGATCTAGTCTAACAATTGTGCTTTCTGGTTTCAGGGCA

mRNA sequence

ATGTCCGATATAGTCACTGAAGCCTGGAAAGGATATCTCCTGCAACTTCGGAAGCACCCTCTCAGAACCAAGGCAATCACTGCTGGGGTTTTGGCTGGTTGCAGCGATGCAGTGGCTCAGAAGATTTCTGGGGTTAAAAAGCTTCAATTGAGAAGATTACTTCTTTTAATGCTCTATGGCTTTGCTTATTCTGGACCATTTGGGCATTTTCTGCATAAGTTGATGGATAGAATTTTCAGGGGAAAGAAAGGCAACACAACTGTTGCAAAGAAGGTTTTATTGGAGCAATTGACTAGCTCTCCTTGGAACAATATGCTTTTCATGATGTACTATGGTTTGGTAGTTGAAGGAAGATCATGGAGTTTAGTCAAAAACAAACTTCGAAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGTTCTGGCCTATAGTTGGTTGGGTGAATTACCAGTACATGCCTCTGCAGTTTCGAGTGTTATTCCACAGCTTTGTTGCTTCATGCTGGTGA

Coding sequence (CDS)

ATGTCCGATATAGTCACTGAAGCCTGGAAAGGATATCTCCTGCAACTTCGGAAGCACCCTCTCAGAACCAAGGCAATCACTGCTGGGGTTTTGGCTGGTTGCAGCGATGCAGTGGCTCAGAAGATTTCTGGGGTTAAAAAGCTTCAATTGAGAAGATTACTTCTTTTAATGCTCTATGGCTTTGCTTATTCTGGACCATTTGGGCATTTTCTGCATAAGTTGATGGATAGAATTTTCAGGGGAAAGAAAGGCAACACAACTGTTGCAAAGAAGGTTTTATTGGAGCAATTGACTAGCTCTCCTTGGAACAATATGCTTTTCATGATGTACTATGGTTTGGTAGTTGAAGGAAGATCATGGAGTTTAGTCAAAAACAAACTTCGAAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGTTCTGGCCTATAGTTGGTTGGGTGAATTACCAGTACATGCCTCTGCAGTTTCGAGTGTTATTCCACAGCTTTGTTGCTTCATGCTGGTGA

Protein sequence

MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYGFAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSWSLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW

Homology

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BLAST of Spg023225 vs. NCBI nr
Match: XP_022138396.1 (peroxisomal membrane protein PMP22 [Momordica charantia])

HSP 1 Score: 335.9 bits (860), Expect = 2.0e-88
Identity = 155/169 (91.72%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MSD+V EAWKGYLLQL+KHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLL+LYG
Sbjct: 1   MSDVVNEAWKGYLLQLQKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLVLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAYSGPFGHFLHKLMD+IF+GKKGNTTVAKKVLLEQLTSSPWNN+LFM+YYGLVVEGRSW
Sbjct: 61  FAYSGPFGHFLHKLMDKIFKGKKGNTTVAKKVLLEQLTSSPWNNILFMIYYGLVVEGRSW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVKNK+RKDYPTIQL AWRFWP+VGWVNYQYMP+QFRV+FHSFV SCW
Sbjct: 121 SLVKNKVRKDYPTIQLAAWRFWPMVGWVNYQYMPMQFRVIFHSFVGSCW 169

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BLAST of Spg023225 vs. NCBI nr
Match: XP_038906760.1 (peroxisomal membrane protein PMP22 [Benincasa hispida])

HSP 1 Score: 330.9 bits (847), Expect = 6.6e-87
Identity = 154/169 (91.12%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MS IVT+AWKGYLLQL+KHPLRTKAITAGVLAG SD+VAQKISG+KKLQ RRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKHPLRTKAITAGVLAGVSDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY+GPFGHFLHKLMDRIF+GKKGNTTVAKKVLLEQLTSSPWNN+ FMMYYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVK K+RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRV+FHSFVASCW
Sbjct: 121 SLVKTKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCW 169

[Close]

BLAST of Spg023225 vs. NCBI nr
Match: XP_023006319.1 (peroxisomal membrane protein PMP22 [Cucurbita maxima])

HSP 1 Score: 328.2 bits (840), Expect = 4.3e-86
Identity = 151/169 (89.35%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MS IVT+AWKGYLLQL+K+PLRTKAITAGVLAGCSD VAQKISG+KKLQ+RRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLLMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY+GPFGHFLHKLMD+IF+GKKGNTTVAKKV+LEQLTSSPWNN+ FM+YYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVK K+RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRV+FHSFVASCW
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCW 169

[Close]

BLAST of Spg023225 vs. NCBI nr
Match: XP_022959090.1 (peroxisomal membrane protein PMP22 [Cucurbita moschata] >XP_023547635.1 peroxisomal membrane protein PMP22 [Cucurbita pepo subsp. pepo] >KAG6574905.1 Peroxisomal membrane protein PMP22, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013476.1 Peroxisomal membrane protein PMP22 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.0 bits (837), Expect = 9.5e-86
Identity = 150/169 (88.76%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MS IVT+AWKGYLLQL+K+PLRTKAITAGVLAGCSD VAQKISG+KKLQ+RRLLL+MLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLVMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY+GPFGHFLHKLMD+IF+GKKGNTTVAKKV+LEQLTSSPWNN+ FM+YYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVK K+RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRV+FHSFVASCW
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCW 169

[Close]

BLAST of Spg023225 vs. NCBI nr
Match: XP_008460659.1 (PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo] >KAA0050714.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa] >TYK01447.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa])

HSP 1 Score: 327.0 bits (837), Expect = 9.5e-86
Identity = 153/169 (90.53%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MS IVTEAW+GYLLQL+K+PLRTKAITAGVLAG SD+VAQKISG+KKLQ RRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY+GPFGHFLHKLMDRIF+GKKGNTTVAKKVLLEQLTSSPWNN+ FMMYYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVK K+RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRV+FHSFVASCW
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCW 169

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BLAST of Spg023225 vs. ExPASy Swiss-Prot
Match: Q9ZS51 (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-55
Identity = 95/158 (60.13%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 12  YLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYGFAYSGPFGHFL 71
           YL QL++HPLRTKAITAGVL+G SD V+QK+SG++K+QLRR+LL +++   + GP GHF 
Sbjct: 14  YLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFF 73

Query: 72  HKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSWSLVKNKLRKDY 131
           H  +D+ F+GKK   TVAKKV+LEQLT SP N++LFM+YYG+V+E   W+LV+ +++K Y
Sbjct: 74  HTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKKTY 133

Query: 132 PTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           PT+QLTAW F+P+VGW+NY+Y+PL FRV+ HS VA  W
Sbjct: 134 PTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFW 171

[Close]

BLAST of Spg023225 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-18
Identity = 50/169 (29.59%), Postives = 95/169 (56.21%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           ++D VT  W  Y+ +L+  P++TKA+T+  L+  S  VAQK    KK+    ++   ++G
Sbjct: 9   LTDAVT-TW--YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWG 68

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
              S P  H+ H ++DR+F+  K       K++++QL  +P+ N+ F      +++G+  
Sbjct: 69  L-ISSPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLA-ILDGKPK 128

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           S++       +PT++  +W+ WP+   +N++++P   RVLF + V  CW
Sbjct: 129 SILFKLYFDLFPTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCW 171

[Close]

BLAST of Spg023225 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.3e-17
Identity = 55/162 (33.95%), Postives = 87/162 (53.70%), Query Frame = 0


Query: 12  YLLQLRKHPLRTKAITAGVLAGCSDAVAQKI----SGVKKLQLRRLLLLMLYGFAYSGPF 71
           YL QL K+P+ TKA+T+G L   SD++ Q I       KK   +R + + ++GFA +GP 
Sbjct: 15  YLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPL 74

Query: 72  GHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSWSLVKNKL 131
            H+  K +D+ F  KK       K+ ++Q+  SP  N LF    G ++EG+S   +  KL
Sbjct: 75  FHYWFKYLDKHF-PKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKSKDDIVEKL 134

Query: 132 RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           +KD+ T  ++    WP + +VN+ Y+    RV F +     W
Sbjct: 135 KKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGW 174

[Close]

BLAST of Spg023225 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 9.7e-17
Identity = 54/164 (32.93%), Postives = 95/164 (57.93%), Query Frame = 0


Query: 12  YLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKK-----LQLRRLLLLMLYGFAYSGP 71
           YLL L+ +P+ TKA+++G+L+   + +AQ I   ++     L++  LL  ++YG   +GP
Sbjct: 25  YLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTGP 84

Query: 72  FGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSWSLVKNK 131
             H+L+  M+     +    +V K++LL++L  +P   +LF     L +EG++ S+   K
Sbjct: 85  LSHYLYLFMEYSVPPEVPWASV-KRLLLDRLFFAPTFLLLFFFVMNL-LEGKNVSVFVAK 144

Query: 132 LRKDY-PTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           +R  + P +Q+  WR W  + ++N  Y+PLQFRVLF +  A  W
Sbjct: 145 MRSGFWPALQMN-WRMWTPLQFININYVPLQFRVLFANMAALFW 185

[Close]

BLAST of Spg023225 vs. ExPASy Swiss-Prot
Match: Q07066 (Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-16
Identity = 55/164 (33.54%), Postives = 94/164 (57.32%), Query Frame = 0


Query: 12  YLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKK-----LQLRRLLLLMLYGFAYSGP 71
           YLL L+ +P+ TKA+++G+L+   + +AQ I   +K     L++  LL  ++YG   +GP
Sbjct: 25  YLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLVYGLFVTGP 84

Query: 72  FGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSWSLVKNK 131
             H+L+  M+     +     V K++LL++L  +P   +LF     L +EG++ S+   K
Sbjct: 85  LSHYLYLFMEYWVPPEVPWARV-KRLLLDRLFFAPTFLLLFFFVMNL-LEGKNISVFVAK 144

Query: 132 LRKDY-PTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           +R  + P +Q+  WR W  + ++N  Y+PLQFRVLF +  A  W
Sbjct: 145 MRSGFWPALQMN-WRMWTPLQFININYVPLQFRVLFANMAALFW 185

[Close]

BLAST of Spg023225 vs. ExPASy TrEMBL
Match: A0A6J1C9K7 (peroxisomal membrane protein PMP22 OS=Momordica charantia OX=3673 GN=LOC111009580 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 9.9e-89
Identity = 155/169 (91.72%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MSD+V EAWKGYLLQL+KHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLL+LYG
Sbjct: 1   MSDVVNEAWKGYLLQLQKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLVLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAYSGPFGHFLHKLMD+IF+GKKGNTTVAKKVLLEQLTSSPWNN+LFM+YYGLVVEGRSW
Sbjct: 61  FAYSGPFGHFLHKLMDKIFKGKKGNTTVAKKVLLEQLTSSPWNNILFMIYYGLVVEGRSW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVKNK+RKDYPTIQL AWRFWP+VGWVNYQYMP+QFRV+FHSFV SCW
Sbjct: 121 SLVKNKVRKDYPTIQLAAWRFWPMVGWVNYQYMPMQFRVIFHSFVGSCW 169

[Close]

BLAST of Spg023225 vs. ExPASy TrEMBL
Match: A0A6J1L1V0 (peroxisomal membrane protein PMP22 OS=Cucurbita maxima OX=3661 GN=LOC111499089 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.1e-86
Identity = 151/169 (89.35%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MS IVT+AWKGYLLQL+K+PLRTKAITAGVLAGCSD VAQKISG+KKLQ+RRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLLMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY+GPFGHFLHKLMD+IF+GKKGNTTVAKKV+LEQLTSSPWNN+ FM+YYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVK K+RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRV+FHSFVASCW
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCW 169

[Close]

BLAST of Spg023225 vs. ExPASy TrEMBL
Match: A0A5D3BQ13 (Peroxisomal membrane protein PMP22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00350 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86
Identity = 153/169 (90.53%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MS IVTEAW+GYLLQL+K+PLRTKAITAGVLAG SD+VAQKISG+KKLQ RRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY+GPFGHFLHKLMDRIF+GKKGNTTVAKKVLLEQLTSSPWNN+ FMMYYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVK K+RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRV+FHSFVASCW
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCW 169

[Close]

BLAST of Spg023225 vs. ExPASy TrEMBL
Match: A0A6J1H5B2 (peroxisomal membrane protein PMP22 OS=Cucurbita moschata OX=3662 GN=LOC111460189 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86
Identity = 150/169 (88.76%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MS IVT+AWKGYLLQL+K+PLRTKAITAGVLAGCSD VAQKISG+KKLQ+RRLLL+MLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLVMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY+GPFGHFLHKLMD+IF+GKKGNTTVAKKV+LEQLTSSPWNN+ FM+YYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVK K+RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRV+FHSFVASCW
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCW 169

[Close]

BLAST of Spg023225 vs. ExPASy TrEMBL
Match: A0A1S3CDE7 (peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103499432 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86
Identity = 153/169 (90.53%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MS IVTEAW+GYLLQL+K+PLRTKAITAGVLAG SD+VAQKISG+KKLQ RRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY+GPFGHFLHKLMDRIF+GKKGNTTVAKKVLLEQLTSSPWNN+ FMMYYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           SLVK K+RKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRV+FHSFVASCW
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCW 169

[Close]

BLAST of Spg023225 vs. TAIR 10
Match: AT4G14305.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 308.9 bits (790), Expect = 2.5e-84
Identity = 142/169 (84.02%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MSDIVTEAWKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYG 60
           MSD+  +AW+ YL+QL+ HPLRTKAITAGVLAGCSDA+AQKISGVK++Q RRLLLLMLYG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  FAYSGPFGHFLHKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSW 120
           FAY GPFGHF HKLMD IF+GKKGN+TVAKKVLLEQLTSSPWNN LFM YYGLVVEGR W
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 121 SLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
            LVK+KL KDYPTIQLTAW+FWPIVGWVNYQY+PLQFRVLF SFVASCW
Sbjct: 121 KLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCW 169

[Close]

BLAST of Spg023225 vs. TAIR 10
Match: AT4G14305.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 266.2 bits (679), Expect = 1.8e-71
Identity = 123/141 (87.23%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 29  GVLAGCSDAVAQKISGVKKLQLRRLLLLMLYGFAYSGPFGHFLHKLMDRIFRGKKGNTTV 88
           GVLAGCSDA+AQKISGVK++Q RRLLLLMLYGFAY GPFGHF HKLMD IF+GKKGN+TV
Sbjct: 17  GVLAGCSDAIAQKISGVKRIQFRRLLLLMLYGFAYGGPFGHFFHKLMDTIFKGKKGNSTV 76

Query: 89  AKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSWSLVKNKLRKDYPTIQLTAWRFWPIVGWV 148
           AKKVLLEQLTSSPWNN LFM YYGLVVEGR W LVK+KL KDYPTIQLTAW+FWPIVGWV
Sbjct: 77  AKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPIVGWV 136

Query: 149 NYQYMPLQFRVLFHSFVASCW 170
           NYQY+PLQFRVLF SFVASCW
Sbjct: 137 NYQYVPLQFRVLFSSFVASCW 157

[Close]

BLAST of Spg023225 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 217.2 bits (552), Expect = 9.9e-57
Identity = 95/158 (60.13%), Postives = 129/158 (81.65%), Query Frame = 0


Query: 12  YLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLLMLYGFAYSGPFGHFL 71
           YL QL++HPLRTKAITAGVL+G SD V+QK+SG++K+QLRR+LL +++   + GP GHF 
Sbjct: 14  YLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFF 73

Query: 72  HKLMDRIFRGKKGNTTVAKKVLLEQLTSSPWNNMLFMMYYGLVVEGRSWSLVKNKLRKDY 131
           H  +D+ F+GKK   TVAKKV+LEQLT SP N++LFM+YYG+V+E   W+LV+ +++K Y
Sbjct: 74  HTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKKTY 133

Query: 132 PTIQLTAWRFWPIVGWVNYQYMPLQFRVLFHSFVASCW 170
           PT+QLTAW F+P+VGW+NY+Y+PL FRV+ HS VA  W
Sbjct: 134 PTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFW 171

[Close]

BLAST of Spg023225 vs. TAIR 10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 74.7 bits (182), Expect = 7.9e-14
Identity = 49/189 (25.93%), Postives = 89/189 (47.09%), Query Frame = 0


Query: 9   WKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKIS------------------------G 68
           W+ Y   L  HP++T+ I++G L G  D  AQ I+                         
Sbjct: 5   WRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIK 64

Query: 69  VK-------KLQLRRLLLLMLYGFAYSGPFGHFLHKLMDRIFRGK-----KGNTTVAKKV 128
           VK       K+  +R+ +  ++GF + GP GHF ++ +D+  + K     K    VA KV
Sbjct: 65  VKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKV 124

Query: 129 LLEQLTSSPWNNMLFMMYYGLVVEGRSWSLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQY 162
            ++ L   P + ++F  Y G    G++ + VK  L++D+          WP++   N++Y
Sbjct: 125 AMDGLIFGPVDLLVFFTYMGFAT-GKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRY 184

[Close]

BLAST of Spg023225 vs. TAIR 10
Match: AT3G24570.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.2e-07
Identity = 44/178 (24.72%), Postives = 80/178 (44.94%), Query Frame = 0


Query: 9   WKGYLLQLRKHPLRTKAITAGVLAGCSDAVAQKISGVKKLQLRRLLLL------------ 68
           W+ Y   L  HP++T+ I++G L G  D  AQ I+       RRLL L            
Sbjct: 5   WRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYIT--HSTAKRRLLRLTETNKDADADAE 64

Query: 69  MLYGFAYSGPFG--------HFLHKLMDRIFRGK-----KGNTTVAKKVLLEQLTSSPWN 128
           +   +     F           +++ +D+  + K     K    VA KV ++ L   P +
Sbjct: 65  IKVKWKQDAEFKVNWKRVAITSMYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLIFGPVD 124

Query: 129 NMLFMMYYGLVVEGRSWSLVKNKLRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVLF 162
            ++F  Y G    G++ + VK  L++D+          WP++   N++Y+P+Q+++L+
Sbjct: 125 LLVFFTYMGFAT-GKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQLLY 179

The following BLAST results are available for this feature:

BLAST of Spg023225 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138396.1	2.0e-88	91.72	peroxisomal membrane protein PMP22 [Momordica charantia]	[more]
XP_038906760.1	6.6e-87	91.12	peroxisomal membrane protein PMP22 [Benincasa hispida]	[more]
XP_023006319.1	4.3e-86	89.35	peroxisomal membrane protein PMP22 [Cucurbita maxima]	[more]
XP_022959090.1	9.5e-86	88.76	peroxisomal membrane protein PMP22 [Cucurbita moschata] >XP_023547635.1 peroxiso...	[more]
XP_008460659.1	9.5e-86	90.53	PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo] >KAA0050714.1 perox...	[more]

BLAST of Spg023225 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZS51	1.4e-55	60.13	Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1...	[more]
Q54GD8	3.0e-18	29.59	PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE...	[more]
Q54FR4	3.3e-17	33.95	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]
P42925	9.7e-17	32.93	Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2	[more]
Q07066	2.2e-16	33.54	Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2	[more]

BLAST of Spg023225 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C9K7	9.9e-89	91.72	peroxisomal membrane protein PMP22 OS=Momordica charantia OX=3673 GN=LOC11100958...	[more]
A0A6J1L1V0	2.1e-86	89.35	peroxisomal membrane protein PMP22 OS=Cucurbita maxima OX=3661 GN=LOC111499089 P...	[more]
A0A5D3BQ13	4.6e-86	90.53	Peroxisomal membrane protein PMP22 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1H5B2	4.6e-86	88.76	peroxisomal membrane protein PMP22 OS=Cucurbita moschata OX=3662 GN=LOC111460189...	[more]
A0A1S3CDE7	4.6e-86	90.53	peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103499432 PE=3 ...	[more]

BLAST of Spg023225 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14305.1	2.5e-84	84.02	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G14305.2	1.8e-71	87.23	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G04470.1	9.9e-57	60.13	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT3G24570.1	7.9e-14	25.93	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT3G24570.2	3.2e-07	24.72	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 114..169 e-value: 1.9E-16 score: 60.0
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 1..169
None	No IPR available	PANTHER	PTHR11266:SF46	OS08G0566900 PROTEIN	coord: 1..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023225.1	Spg023225.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane