Spg023166 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg023166
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold13: 13699721 .. 13701924 (+)
RNA-Seq ExpressionSpg023166
SyntenySpg023166
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATACAGTGCAAGAGAGGGTTGATGAGGCTTCGTAGAGATCAAAGAAAAGAAGAAGAGGTCTAAGAGAGAAAAAAAAAGTAAGAACCCCTACCCCAACCCTTTCTCCTGACCATTTGTTTCTGAAAAAGAAAAGCCAGAAGAGGAAAAAGAAGATAAGAGGAATGAAGTTGAGACTGAAATAGAACTGAGTGAAGAAGTTGAGCTTGATGAAAGATTTCAGAGGTTCATTAATGAAGATGAAGCGAAATGTTCTAATGGAGCGCGGCTTCAATGATGGCAAAGAGTTTGCACATTTTCCTTGAGCGAACATCACTAATCACAGTTGGAAACGGCTGTGCGCAAAGCCGAAGCCCACTGTTGATCAACTAGAATGGGAGTTCTACGCCAACATTGATGAAAATGAAGGATTATTGGTTATTGTTCGTAGAGTTGTTGTCGACTGGAGCTTTGGAGTGAGTAATTCTCTATTTAACTTGAAAGACGTCACCCACACTGTTTTCAATAAAATATTAGTTGCTTCATCAAACGAGCAACTGAATGCCTAGTGGAGGTTGTCTAAAATGAGGGCAAGAATATTCCAGTCAACATACCTGTAGAGTAAGGCTACTACTTGGCTCGACTTTATGAAGAAGAGATTATTGCTTACAGCGTACGACTTCACTGTCTCCCGTGATCGACTGCACTTGAAGGTTCAGAGTCCCAAAATGTTCCAGTGAAATAAAGTTGTTTGACAAGAGGATTATTGACACTACTAGACTTCAGAGAGGTGAGACGTGCTAAGGTGGTTTGTTGTGTTGTGTCCATAGGGTGCTAGAGCAATTTGAGATGGTGCTCAGTAGGCTAGAATTCACTGCGAGACAACTTCGAACCTACTAGAGCTATGCTGATAAAAGGGACACCACACTAAAGAGGGCTATGCAAGCGAATTTTTCTAAGCCATATCAAGCCTTCCTAATTTTCATTGATGATCTTATGAACCCTTGCATTCCACCCCCGTCCATCATTTGAGAGGAAGAAGAAAACCAGAGCCTGAACATAAAGAAGAATTACAGGGAAGTTTTAGTTTCTTCGAGCAAATATTTTGATGAATGATTTTATGTGCTCGTCTTGCTTGTGTTTTGTTCTTTCTGCTTATGTTATGTTCTATTTCTTTGTTTTTATCTAATGCTTTAAAATCTATCTCTTTCATGATTACGTAAATCTGTGATCTTGATCTTTAAAGAAATCAAATATTGTTTTGTTTGGCACATCTGAGTGTCTAACTTAATTTTCTTCTGAATTTTTGAAGCTTGGACTAGTTAGCTTAATTAGATCACGATGTTCTGATCTCTAGAAAAACCTTTTGCTTGAGCATTCCTTCTAGCCTAGTCATGAGTGCAACAAAAGTTCTGAGGTAGCATTGACTTATTGGATCCACCTTAGGCTTAATTCTAGTCTCACGCTTAGTTTAAAATTCAGATAGAAAATTTTAAGTTTGGGGGTATAATTTAACATGATAATAATTCATTGACAATGAATAATTTAAGTTTAGGGGACTTTTAGCTACTCCTCTTGTTTTGTCCGAGCATTCCTCTCCTTCATAATAATTTTTCTAGGTTGTTGAGTAACCAGGGACATTTGTGACACCCACAGTTTGTCTTTGCATCAAAAAATGACCTAGGAGAATATATAAAAAAAAAATGATAAAAATAATTGCTGAAAAGAAAAATTTTGAAAAATTTTGCTGAGAAAATTCATAGAGCAAAAGTTTTGAAGGATGAATGATAATCTAGCAGTTTTCTGTCTCACAAGGCTTAGGTGAGCTTCATCATAAAATGTCGCCATTCTGAGAAGCAAGGGATAGAATAACTAAGGATTTTTGGGTTTAACAATGAGTATTTAGCCTAATTGGTGATAAGTTTGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCTCATGCTTAAAAGCTTATGACTGTAAGGCTGCTTTAAGTCTGAAGAACAAAAGAATAAATCCCCTAAAATATGTGTTCAAATATGTCTGATAATAGAGCTAAGCTGTGGTAAGTTCTTAGGATTGAGTTAAAGGTGGTGATTATTTGTTCAAAGCTAAAAGAATTATTTTGCTGCAGCAGTGCTTGGTTTTGCAGGATGCTCGGGTAAAGGTTGAAGGTAGTGTTGGAATATCTGTTTTGATTGAGTTGTGCTATGACTAA

mRNA sequence

ATGAAGATACAGTGCAAGAGAGGGTTGATGAGGCTTCGTAGAGATCAAAGAAAAGAAGAAGAGCCAGAAGAGGAAAAAGAAGATAAGAGGAATGAAGTTGAGACTGAAATAGAACTGAGTGAAGAAGTTGAGCTTGATGAAAGATTTCAGAGTTGGAAACGGCTGTGCGCAAAGCCGAAGCCCACTGTTGATCAACTAGAATGGGAGTTCTACGCCAACATTGATGAAAATGAAGGATTATTGGTTATTGTTCGTAGAGTTGTTGTCGACTGGAGCTTTGGAAGTAAGGCTACTACTTGGCTCGACTTTATGAAGAAGAGATTATTGCTTACAGCGTACGACTTCACTGTCTCCCGTGATCGACTGCACTTGAAGGATGCTCGGGTAAAGGTTGAAGGTAGTGTTGGAATATCTGTTTTGATTGAGTTGTGCTATGACTAA

Coding sequence (CDS)

ATGAAGATACAGTGCAAGAGAGGGTTGATGAGGCTTCGTAGAGATCAAAGAAAAGAAGAAGAGCCAGAAGAGGAAAAAGAAGATAAGAGGAATGAAGTTGAGACTGAAATAGAACTGAGTGAAGAAGTTGAGCTTGATGAAAGATTTCAGAGTTGGAAACGGCTGTGCGCAAAGCCGAAGCCCACTGTTGATCAACTAGAATGGGAGTTCTACGCCAACATTGATGAAAATGAAGGATTATTGGTTATTGTTCGTAGAGTTGTTGTCGACTGGAGCTTTGGAAGTAAGGCTACTACTTGGCTCGACTTTATGAAGAAGAGATTATTGCTTACAGCGTACGACTTCACTGTCTCCCGTGATCGACTGCACTTGAAGGATGCTCGGGTAAAGGTTGAAGGTAGTGTTGGAATATCTGTTTTGATTGAGTTGTGCTATGACTAA

Protein sequence

MKIQCKRGLMRLRRDQRKEEEPEEEKEDKRNEVETEIELSEEVELDERFQSWKRLCAKPKPTVDQLEWEFYANIDENEGLLVIVRRVVVDWSFGSKATTWLDFMKKRLLLTAYDFTVSRDRLHLKDARVKVEGSVGISVLIELCYD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg023166.1Spg023166.1mRNA