Spg023085 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023085
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RNase H domain-containing protein
Location	scaffold12: 30010861 .. 30012688 (-)
RNA-Seq Expression	Spg023085
Synteny	Spg023085

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCGAGGAAGATGGAGAAGTGACGGCAAAGACAACGTTGGCGTGAAGGAGGTGACGATGGAAGAGAGGGAGAGTGAATGGAGGAGCGGAAGCGACGCGACTGGGCGAATGGTGTAAGCGGAGAAGGGGAGCGCGGCTGGGTGTTTTCTATCGAGAGAGAGGAGAAAGAGAGGGCGAGAGTTCTGAGGGTTAAAAAAAACTTATACATTTCTTTTTTTTTTCTAAACAACCGGCTGCTACAAAGGAAATGGATGGTCTCGATGCCGGGATGGAATCATAAGTCCACTACACAGTTAAGCTTAAGCCTTTGTTCTCTTTGCTCCAGCTCACTCAACACCAAGTTTTATGAAAATCCCTTCAATCTTTGCTACCTCAAAGGAAATCCATCAAAGGCAATCTCTAGCAGCCTTTTCTTCTATTTTTGGATAGTTAGGATTAGTCGAATCCTTATTTAACTTTTTATAGTTTGGATTAGCCGAATCCTTTTTAAATTTTTTGTTTACTTACATATGTATTATTGCAGTCAATTCTTCATGAAGGGAAGTATTAAGCTGTGTCTCTCTATTACTGTTGAACATTTATTTTCTTTTAGCTCATTTTGTCTTTTGTGTAACAGAATATTCGCAGCTTGCTTTGCAAGTTGGGACTGAATTTTGCTGATTTTTTAAGTGCAATTGAATTGGAACCAATCCCTCCCTAACCTGGTGCAGTATTCTTTGGGGAAGAGATTTGTTTAAAAAAGGATATAGATGGAGGATAGGGAACGGGCAGCAGGTGACCATAGACCAAGATCCGTGGCTCCCCTCCAATGGGGCAATAACTCCTATTCTCACAAAAGATATCCTAAAAGGCAGGAAAGTCCAGGACATTATGGACTCCCAAGGAGCATGGAAGGAAGATGTTATCAAAGAAAATTTTACAGCTATTGATGCATCAACAATCCTCAATTCAATCTCAGGGGGCCCAAATCAGAAGGACGAAATCATATGTAATGGAGAAAAAAAAAGGAGCCTTTACGGTCAAAAGTGCATACCATCTCGCAGTCCAAATTGACTCAAATCAAAAGGCAGCCCCGTCTAACAATCATGCCCATGACCCTATGTGGAGGAAATTCTGGAATATAAAGGCTATTCCCAAAGCCAAGATTTGTGTGTGGCGCAACATTCAGAACTCACTCCCTACGGGCTCAAACATTAATCTCAAGGGCATTTACACTAACCCAATTTGTTTTTGGTGCAGGAAACACACGGAATCAGTGGAGCATATCTTTTGGGGTTGTAAGTTCTCTAAATTCGCTTGGAGAAAAATTATCCCCCTAATGGATGGCTTGTTTTCGTTAAACAGGGGTCAGTGGACAGCGCGAGACCATTGGAGGTGGATGGAAGAAAATCTCGGAACTGAAGATCTGGAGAAAGCGACCTTAGTTCTATGGAGTTTATGGAACCAGAGAAACCAATCAATCCAGTCGAATCAAGATCCCGATTTCAAATATCTAACAAGGGCGGTTAATGCAAACATCAAGGAGGAGAAAAAGAGAGTTTCCGCTAACCTGTTCAGCCTTTCGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTCATGCATCGTGGGAGCCGCCCCCAGCAGGTGTGTGGAAGCTTAACGTGGATGCTTCTCGGTCGGAAATGTCCCAAACGAGCGGTCTCGGGTGGATTTTGCGTGACTCTACAGGATCTCCAATCTGTGGAGGATTGAAGAGGATCAACTCAAGCTGGTCCATCAAAATGCTGGAGATGAAGGCTATTCTAGAAGGGCTGAAGAGTTTACAGTCCAAGTCGATTTGA

mRNA sequence

ATGGAAGAAAATCTCGGAACTGAAGATCTGGAGAAAGCGACCTTAGTTCTATGGAGTTTATGGAACCAGAGAAACCAATCAATCCAGTCGAATCAAGATCCCGATTTCAAATATCTAACAAGGGCGGTTAATGCAAACATCAAGGAGGAGAAAAAGAGAGTTTCCGCTAACCTGTTCAGCCTTTCGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTCATGCATCGTGGGAGCCGCCCCCAGCAGGTGTGTGGAAGCTTAACGTGGATGCTTCTCGGTCGGAAATGTCCCAAACGAGCGGTCTCGGGTGGATTTTGCGTGACTCTACAGGATCTCCAATCTGTGGAGGATTGAAGAGGATCAACTCAAGCTGGTCCATCAAAATGCTGGAGATGAAGGCTATTCTAGAAGGGCTGAAGAGTTTACAGTCCAAGTCGATTTGA

Coding sequence (CDS)

ATGGAAGAAAATCTCGGAACTGAAGATCTGGAGAAAGCGACCTTAGTTCTATGGAGTTTATGGAACCAGAGAAACCAATCAATCCAGTCGAATCAAGATCCCGATTTCAAATATCTAACAAGGGCGGTTAATGCAAACATCAAGGAGGAGAAAAAGAGAGTTTCCGCTAACCTGTTCAGCCTTTCGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTCATGCATCGTGGGAGCCGCCCCCAGCAGGTGTGTGGAAGCTTAACGTGGATGCTTCTCGGTCGGAAATGTCCCAAACGAGCGGTCTCGGGTGGATTTTGCGTGACTCTACAGGATCTCCAATCTGTGGAGGATTGAAGAGGATCAACTCAAGCTGGTCCATCAAAATGCTGGAGATGAAGGCTATTCTAGAAGGGCTGAAGAGTTTACAGTCCAAGTCGATTTGA

Protein sequence

MEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKAILEGLKSLQSKSI

Homology

[Close]

BLAST of Spg023085 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 84.3 bits (207), Expect = 9.4e-13
Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = 0


Query: 1   MEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFS 60
           M +    EDL+   +  W +WN RN  I   +   F  + + +   + E   +   +L  
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSM 60

Query: 61  LSCLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLK 120
           L        ++L++   WEPPP  +W LN DAS S+ +   G+GWI+R   G  +  G +
Sbjct: 61  L-------HKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNR 120

Query: 121 RINSSWSIKMLEMKAILEGLKSLQSKSI 149
            + +  ++K+LE  AILEGL++L +  +
Sbjct: 121 FVEACNNVKLLEASAILEGLRNLTNLGV 141

[Close]

BLAST of Spg023085 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10
Identity = 51/155 (32.90%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 5   LGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRA----VNANIKE-----EKKRVS 64
           L  E++  + ++ W +W  RN+SI   +  D + L R+    +N+NI +     + +R  
Sbjct: 26  LSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSNIDKGTCISQTRRSQ 85

Query: 65  ANLFSLSCLNPSGSESLSS-HASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSP 124
            N   L    P G E+L+     W  PP   WKLN DAS SE  +  G+GWIL D  G  
Sbjct: 86  QNDGYL----PRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEI 145

Query: 125 ICGGLKRINSSWSIKMLEMKAILEGLK--SLQSKS 148
           +  G  +I     I  LE+  I+ GL+  ++QS+S
Sbjct: 146 VLAGNCKIREKKEINALELMTIIRGLQFINMQSRS 176

[Close]

BLAST of Spg023085 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-10
Identity = 41/152 (26.97%), Postives = 75/152 (49.34%), Query Frame = 0


Query: 3   ENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDF--------KYLTRAVNANIKEEKKRV 62
           +  G E+  ++ ++ W +W  RN+SI     P+         +Y+  +   N   + K  
Sbjct: 2   DKAGEEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKST 61

Query: 63  SANLFSLSCLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSP 122
           + +L  +  +        ++ A W+PP +  WKLN +A+    + T G+GWILRD  G  
Sbjct: 62  NKDLHLIRRIED------NTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEV 121

Query: 123 ICGGLKRINSSWSIKMLEMKAILEGLKSLQSK 147
           I    + I +  +I  LE+ AI EGL++++ +
Sbjct: 122 IKASCRIIRAERNITYLEVMAICEGLRAIRQE 147

[Close]

BLAST of Spg023085 vs. NCBI nr
Match: XP_021854581.1 (uncharacterized protein LOC110793955 [Spinacia oleracea])

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-09
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 11  EKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSE 70
           ++   +LW  WN+RN  + +N+D     +   VN  ++E+ K      +S    N   + 
Sbjct: 48  KRGAALLWWTWNRRNDKVFNNKDIPHLLVRERVNRLVEEQGK------YSNRIYNRISNT 107

Query: 71  SLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKM 130
           S  S  +W+PPP+G  K+N DAS +E     GLG   RDS G+ I  G +R+   W  ++
Sbjct: 108 SPISPRTWKPPPSGFVKVNCDASLTEQGWI-GLGATARDSQGAIIFAGTRRVRGRWPPEI 167

Query: 131 LEMKAILEGLK 142
            E KAIL  +K
Sbjct: 168 AECKAILFAVK 171

[Close]

BLAST of Spg023085 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-09
Identity = 40/144 (27.78%), Postives = 72/144 (50.00%), Query Frame = 0


Query: 3   ENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLS 62
           +  G E+  ++ ++   +W  RN+SI      + + +  A++  I     + +       
Sbjct: 180 DKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSK 239

Query: 63  CLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRI 122
             +P      ++ A W+PP +  WKLN DA+    + T G+GWILRD  G  I  G + I
Sbjct: 240 DFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRII 299

Query: 123 NSSWSIKMLEMKAILEGLKSLQSK 147
            +  +I  LE+ AI EGL++++ +
Sbjct: 300 RAERNITYLEVMAICEGLRAIRQE 323

[Close]

BLAST of Spg023085 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.5e-13
Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = 0


Query: 1   MEENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFS 60
           M +    EDL+   +  W +WN RN  I   +   F  + + +   + E   +   +L  
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSM 60

Query: 61  LSCLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLK 120
           L        ++L++   WEPPP  +W LN DAS S+ +   G+GWI+R   G  +  G +
Sbjct: 61  L-------HKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNR 120

Query: 121 RINSSWSIKMLEMKAILEGLKSLQSKSI 149
            + +  ++K+LE  AILEGL++L +  +
Sbjct: 121 FVEACNNVKLLEASAILEGLRNLTNLGV 141

[Close]

BLAST of Spg023085 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 7.2e-11
Identity = 51/155 (32.90%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 5   LGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRA----VNANIKE-----EKKRVS 64
           L  E++  + ++ W +W  RN+SI   +  D + L R+    +N+NI +     + +R  
Sbjct: 26  LSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSNIDKGTCISQTRRSQ 85

Query: 65  ANLFSLSCLNPSGSESLSS-HASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSP 124
            N   L    P G E+L+     W  PP   WKLN DAS SE  +  G+GWIL D  G  
Sbjct: 86  QNDGYL----PRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEI 145

Query: 125 ICGGLKRINSSWSIKMLEMKAILEGLK--SLQSKS 148
           +  G  +I     I  LE+  I+ GL+  ++QS+S
Sbjct: 146 VLAGNCKIREKKEINALELMTIIRGLQFINMQSRS 176

[Close]

BLAST of Spg023085 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-10
Identity = 41/152 (26.97%), Postives = 75/152 (49.34%), Query Frame = 0


Query: 3   ENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDF--------KYLTRAVNANIKEEKKRV 62
           +  G E+  ++ ++ W +W  RN+SI     P+         +Y+  +   N   + K  
Sbjct: 2   DKAGEEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKST 61

Query: 63  SANLFSLSCLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSP 122
           + +L  +  +        ++ A W+PP +  WKLN +A+    + T G+GWILRD  G  
Sbjct: 62  NKDLHLIRRIED------NTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEV 121

Query: 123 ICGGLKRINSSWSIKMLEMKAILEGLKSLQSK 147
           I    + I +  +I  LE+ AI EGL++++ +
Sbjct: 122 IKASCRIIRAERNITYLEVMAICEGLRAIRQE 147

[Close]

BLAST of Spg023085 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.0e-09
Identity = 40/144 (27.78%), Postives = 72/144 (50.00%), Query Frame = 0


Query: 3   ENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLS 62
           +  G E+  ++ ++   +W  RN+SI      + + +  A++  I     + +       
Sbjct: 180 DKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSK 239

Query: 63  CLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRI 122
             +P      ++ A W+PP +  WKLN DA+    + T G+GWILRD  G  I  G + I
Sbjct: 240 DFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRII 299

Query: 123 NSSWSIKMLEMKAILEGLKSLQSK 147
            +  +I  LE+ AI EGL++++ +
Sbjct: 300 RAERNITYLEVMAICEGLRAIRQE 323

[Close]

BLAST of Spg023085 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.0e-09
Identity = 40/144 (27.78%), Postives = 72/144 (50.00%), Query Frame = 0


Query: 3   ENLGTEDLEKATLVLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLS 62
           +  G E+  ++ ++   +W  RN+SI      + + +  A++  I     + +       
Sbjct: 145 DKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSK 204

Query: 63  CLNPSGSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRI 122
             +P      ++ A W+PP +  WKLN DA+    + T G+GWILRD  G  I  G + I
Sbjct: 205 DFHPIRRIGDNTRARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRII 264

Query: 123 NSSWSIKMLEMKAILEGLKSLQSK 147
            +  +I  LE+ AI EGL++++ +
Sbjct: 265 RAERNITYLEVMAICEGLRAIRQE 288

[Close]

BLAST of Spg023085 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-06
Identity = 31/127 (24.41%), Postives = 54/127 (42.52%), Query Frame = 0


Query: 16  VLWSLWNQRNQSIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSCLNPSGSESLSSH 75
           ++W +W   N  + ++    F+        + KE       N       N + +   S +
Sbjct: 47  LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTN----EQQNGNRNADPSRN 106

Query: 76  ASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGSPICGGLKRINSSWSIKMLEMKA 135
             W PP     K N DAS  E +  SGLGWILR+S G+ I  G+ +     + +  E   
Sbjct: 107 TKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECST 166

Query: 136 ILEGLKS 143
           ++  +++
Sbjct: 167 LIWAIQA 169

[Close]

BLAST of Spg023085 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 5.3e-06
Identity = 36/122 (29.51%), Postives = 54/122 (44.26%), Query Frame = 0


Query: 16  VLWSLWNQRNQSI--QSNQDPDFKY------LTRAVNANIKEEKKRVSANLFSLSCLNPS 75
           ++W LW  RN  +  Q  Q PD++        T  +NAN   E   V          NP 
Sbjct: 143 IMWRLWKSRNVFLFQQKCQSPDYEARKGIQDATEWLNANETTENTNVHV------ATNPI 202

Query: 76  GSESLSSHASWEPPPAGVWKLNVDASRSEMSQTSGLGWILRDSTGS-PICGGLKRINSSW 129
            +    S + W PPP G  K N D+  ++ S  +  GW +R+  G   +CG  K  +S+ 
Sbjct: 203 QTSRRDS-SQWNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTC 257

The following BLAST results are available for this feature:

BLAST of Spg023085 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155262.1	9.4e-13	29.73	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022143317.1	1.5e-10	32.90	uncharacterized protein LOC111013216 [Momordica charantia]	[more]
XP_022143535.1	3.3e-10	26.97	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
XP_021854581.1	2.2e-09	33.59	uncharacterized protein LOC110793955 [Spinacia oleracea]	[more]
XP_022154990.1	6.3e-09	27.78	uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]	[more]

BLAST of Spg023085 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg023085 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNV9	4.5e-13	29.73	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CQG0	7.2e-11	32.90	uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1CP26	1.6e-10	26.97	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DL64	3.0e-09	27.78	uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DQC9	3.0e-09	27.78	uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Spg023085 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65005.1	2.4e-06	24.41	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G02650.1	5.3e-06	29.51	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 89..144 e-value: 4.7E-8 score: 32.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023085.1	Spg023085.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity