Spg023054 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGCGACGGCGACGGACGGCGGCTTCTCCATCCTCCCCCGAATCCTCCCTTTCTTTCTTTCCCTTTCTTTCTCCCTCTCTTCTCTCCCCTCCTCCCACGAACTCCCTCTCTCCCTTCTGGTTCTCTTCCCCTCTCTCTCCTCTTCTCTTTCTCTCTTCTCCCTCGCCCACCCTTCCCTTTCCCTCGTCTACGAGTACGGCCTCGCCTTAGCCCACAACGAGCTCGAACACGAAGGCATCGTCTACTTCAACTATGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCTCGCAAGGACCACGCCCTCCTCCATCCCCGTCCCATCACTCGCCTCCTCCTCGCCATCAAGCGGACCCGGTGCTGTTTTGCCAAGCTCCTCCGAATTTCACTCACCACAGCGAATACGAAGGCAAAGCCCTAGTCCTTGTCCCCAAATCCACCTACGTTGGCAAATTGCTCAAGAGGAACAAGTTATTGATTTCTAAAAAATTCTCATGCGTTTCTTAACAAATTCACTTGTGGATTTCACTTTCTGCTTTGGATTTTCCCCAATTTTGTTTGGTTTAGGGTTAATTTCATGGTGAGGGATGGGTTTTTGTGTTCTTCCACTAGTAGATGGATTAGGTTTGGGAATTGGGAATGCTTTATTTTTTTTCTTTTTTTTTAATCGTGGGTCAAGCTTTAGAAACAAGGGTCTGATTCAAAATCATGATTGGGTGGGTAAGAAGAAGAGAGGTGGAGGGCAGCGCGGCGGCTATCACCGGCGAGAAAGGGAAGGGTGGGGAAGAGAGAAGAGGAGGGAGAGGGGAAGAAAACCTGAACAGAGAGAAGGAGTTCGAAGATAGGGAGAGAGAAGGAGGGAGGAAGATTTTTTTTTTAATTTTTTTTTAATTTTTGTATTATTTTTTAATTTTTATTATTTAATTATTATTTTTTTATTATTTTAATTCAAAAATTAATATTTTAATATTTTAAACGTGCCACGTCAGCACCGTTAAAAAGATTAACGGTGGAGGGACTTAATAGAAGTATTTTCGAAACAGTAGGGACTTGATTGTTCGATTTTGAAACCTAGGGACCTATTGGAAACGAACCTGAAACATGAGGGACCAAAAAGGTATTTTACCCAAGATATTTAAATAGTATTTTTCTTAGGAGAGACATTGATTTAGTTATTGAAATCATTTAATTAGATTTTATTCAAATAATTTTCTATCTAATAAAACTATCTTTCTAAAAATAGATTATTAGAAGATTTTTACCATTGATCACTGTTCCAGCAAGAAGGCAAGGTAGGCTTACCAATGGTTTTACTGCGCTTCAACGCGTCTTACGACCTGGAGCACCAACCGCAACAGTCCTTCGCAGCAGTCCGTCTCAGTGA ATGGACGCGACGGCGACGGACGGCGGCTTCTCCATCCTCCCCCGAATCCTCCCTTTCTTTCTTTCCCTTTCTTTCTCCCTCTCTTCTCTCCCCTCCTCCCACGAACTCCCTCTCTCCCTTCTGGTTCTCTTCCCCTCTCTCTCCTCTTCTCTTTCTCTCTTCTCCCTCGCCCACCCTTCCCTTTCCCTCGTCTACGAGTACGGCCTCGCCTTAGCCCACAACGAGCTCGAACACGAAGGCATCGTCTACTTCAACTATGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCTCGCAAGGACCACGCCCTCCTCCATCCCCGTCCCATCACTCGCCTCCTCCTCGCCATCAAGCGGACCCGGTGCTCAAGAAGGCAAGGTAGGCTTACCAATGGTTTTACTGCGCTTCAACGCGTCTTACGACCTGGAGCACCAACCGCAACAGTCCTTCGCAGCAGTCCGTCTCAGTGA ATGGACGCGACGGCGACGGACGGCGGCTTCTCCATCCTCCCCCGAATCCTCCCTTTCTTTCTTTCCCTTTCTTTCTCCCTCTCTTCTCTCCCCTCCTCCCACGAACTCCCTCTCTCCCTTCTGGTTCTCTTCCCCTCTCTCTCCTCTTCTCTTTCTCTCTTCTCCCTCGCCCACCCTTCCCTTTCCCTCGTCTACGAGTACGGCCTCGCCTTAGCCCACAACGAGCTCGAACACGAAGGCATCGTCTACTTCAACTATGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCTCGCAAGGACCACGCCCTCCTCCATCCCCGTCCCATCACTCGCCTCCTCCTCGCCATCAAGCGGACCCGGTGCTCAAGAAGGCAAGGTAGGCTTACCAATGGTTTTACTGCGCTTCAACGCGTCTTACGACCTGGAGCACCAACCGCAACAGTCCTTCGCAGCAGTCCGTCTCAGTGA MDATATDGGFSILPRILPFFLSLSFSLSSLPSSHELPLSLLVLFPSLSSSLSLFSLAHPSLSLVYEYGLALAHNELEHEGIVYFNYEFLQSIGISIAKHRLEILKLARKDHALLHPRPITRLLLAIKRTRCSRRQGRLTNGFTALQRVLRPGAPTATVLRSSPSQ Homology
BLAST of Spg023054 vs. NCBI nr
Match: XP_038900622.1 (uncharacterized protein LOC120087790 [Benincasa hispida]) HSP 1 Score: 119.0 bits (297), Expect = 3.8e-23 Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Spg023054 vs. NCBI nr
Match: XP_022948497.1 (uncharacterized protein LOC111452156 [Cucurbita moschata]) HSP 1 Score: 115.9 bits (289), Expect = 3.2e-22 Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023054 vs. NCBI nr
Match: XP_023525324.1 (uncharacterized protein LOC111788960 [Cucurbita pepo subsp. pepo] >KAG7036525.1 hypothetical protein SDJN02_00143, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115.9 bits (289), Expect = 3.2e-22 Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023054 vs. NCBI nr
Match: XP_022998747.1 (uncharacterized protein LOC111493318 [Cucurbita maxima]) HSP 1 Score: 115.9 bits (289), Expect = 3.2e-22 Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023054 vs. NCBI nr
Match: KAG6606819.1 (hypothetical protein SDJN03_00161, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.8 bits (281), Expect = 2.7e-21 Identity = 69/98 (70.41%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of Spg023054 vs. ExPASy TrEMBL
Match: A0A6J1K8U0 (uncharacterized protein LOC111493318 OS=Cucurbita maxima OX=3661 GN=LOC111493318 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22 Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023054 vs. ExPASy TrEMBL
Match: A0A6J1G9F1 (uncharacterized protein LOC111452156 OS=Cucurbita moschata OX=3662 GN=LOC111452156 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22 Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023054 vs. ExPASy TrEMBL
Match: A0A6J1DIZ2 (uncharacterized protein LOC111020921 OS=Momordica charantia OX=3673 GN=LOC111020921 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.7e-21 Identity = 58/69 (84.06%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of Spg023054 vs. ExPASy TrEMBL
Match: A0A0A0KVK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006310 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.9e-21 Identity = 72/114 (63.16%), Postives = 82/114 (71.93%), Query Frame = 0
BLAST of Spg023054 vs. ExPASy TrEMBL
Match: A0A5A7TQT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002020 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 5.0e-21 Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 0
BLAST of Spg023054 vs. TAIR 10
Match: AT1G80520.1 (Sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 87.8 bits (216), Expect = 8.8e-18 Identity = 49/80 (61.25%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of Spg023054 vs. TAIR 10
Match: AT1G15760.1 (Sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 86.3 bits (212), Expect = 2.6e-17 Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of Spg023054 vs. TAIR 10
Match: AT2G12462.1 (BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-08 Identity = 36/96 (37.50%), Postives = 60/96 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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