Spg022922 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022922
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	50S ribosomal protein L2, chloroplastic
Location	scaffold64: 102051 .. 103540 (+)
RNA-Seq Expression	Spg022922
Synteny	Spg022922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAGGTTTACGACGAAACCTAGAAATCGATCACTGATCCAATTTGAGTACCTCCACAGGATAGACCTCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTATTGACTCTAGAGATATAGTAATATGGAGAAGACTAAATTGTTTCAAGCACCGACAGAACCAGAAGCGTCCCCTGTTTCAAAGAGAGGAGGACGGGTTATTCACATTTCATTTGATGGTCAGAGGCAAATTGAAAGCTAAGCAGTGGTAATTCTAAGGATTCCCGAGGGGAAAAATAGAGATGTCTCCTACGTTACCCGTAATATGTGGAAGTATCGACGTAATTTCATAGAGTCATTCGGTCTGAATGCTACATGAAGAACATAAGCCAGATGAAGGAACGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTCGGCAGATTTGGATTCCTATATATCCACTCATGTGGTACTTCATTGTACGATATATATAAGATCCATATGTATAGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGTGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

mRNA sequence

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGTGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

Coding sequence (CDS)

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGTGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

Protein sequence

MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Homology

[Close]

BLAST of Spg022922 vs. NCBI nr
Match: TQD73878.1 (hypothetical protein C1H46_040580 [Malus baccata])

HSP 1 Score: 614.0 bits (1582), Expect = 7.1e-172
Identity = 306/308 (99.35%), Postives = 307/308 (99.68%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+A
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGKA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 308

[Close]

BLAST of Spg022922 vs. NCBI nr
Match: TXG46675.1 (hypothetical protein EZV62_027830 [Acer yangbiense])

HSP 1 Score: 610.9 bits (1574), Expect = 6.0e-171
Identity = 304/308 (98.70%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQK+ESTSTDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKDESTSTDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSA LKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSAALKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+PATPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKRPATPWGYPALGRRSRKRNKYSDN 300

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 308

[Close]

BLAST of Spg022922 vs. NCBI nr
Match: RVW36222.1 (50S ribosomal protein L2, chloroplastic [Vitis vinifera] >RVW71330.1 50S ribosomal protein L2, chloroplastic [Vitis vinifera])

HSP 1 Score: 610.5 bits (1573), Expect = 7.8e-171
Identity = 305/308 (99.03%), Postives = 305/308 (99.03%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPALGRRSRKRNKYSDN 300

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 308

[Close]

BLAST of Spg022922 vs. NCBI nr
Match: YP_009715437.1 (ribosomal protein L2 [Colvillea racemosa] >YP_009715457.1 ribosomal protein L2 [Colvillea racemosa] >YP_009715752.1 ribosomal protein L2 [Zenia insignis] >YP_009715772.1 ribosomal protein L2 [Zenia insignis] >QGL08549.1 ribosomal protein L2 [Colvillea racemosa] >QGL08570.1 ribosomal protein L2 [Colvillea racemosa] >QGL08864.1 ribosomal protein L2 [Zenia insignis] >QGL08885.1 ribosomal protein L2 [Zenia insignis])

HSP 1 Score: 610.5 bits (1573), Expect = 7.8e-171
Identity = 307/309 (99.35%), Postives = 307/309 (99.35%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSA-ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 180
           PIKMGNALPLSA ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT
Sbjct: 121 PIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 180

Query: 181 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR 240
           LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGR
Sbjct: 181 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGR 240

Query: 241 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 300
           AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD
Sbjct: 241 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 300

Query: 301 NLILRRRSK 309
           NLILRRRSK
Sbjct: 301 NLILRRRSK 309

[Close]

BLAST of Spg022922 vs. NCBI nr
Match: QQL04985.1 (ribosomal protein L2 [Ammopiptanthus nanus] >QQL05006.1 ribosomal protein L2 [Ammopiptanthus nanus])

HSP 1 Score: 608.2 bits (1567), Expect = 3.9e-170
Identity = 306/309 (99.03%), Postives = 306/309 (99.03%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPR NLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRKNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSA-ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 180
           PIKMGNALPLSA ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT
Sbjct: 121 PIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 180

Query: 181 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR 240
           LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGR
Sbjct: 181 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGR 240

Query: 241 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 300
           AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD
Sbjct: 241 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 300

Query: 301 NLILRRRSK 309
           NLILRRRSK
Sbjct: 301 NLILRRRSK 309

[Close]

BLAST of Spg022922 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 9.3e-151
Identity = 274/308 (88.96%), Postives = 274/308 (88.96%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPL                                  TDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPL----------------------------------TDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 274

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 274

[Close]

BLAST of Spg022922 vs. ExPASy Swiss-Prot
Match: Q09MB2 (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 3.9e-149
Identity = 270/308 (87.66%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPL                                  TDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPL----------------------------------TDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRA
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+PATPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKRPATPWGYPALGRRSRKRNKYSDN 274

Query: 301 LILRRRSK 309
           LILRRR+K
Sbjct: 301 LILRRRTK 274

[Close]

BLAST of Spg022922 vs. ExPASy Swiss-Prot
Match: Q0ZIX7 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 6.7e-149
Identity = 271/308 (87.99%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPL                                  TDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPL----------------------------------TDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPALGRRSRKRNKYSDN 274

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 274

[Close]

BLAST of Spg022922 vs. ExPASy Swiss-Prot
Match: Q2L944 (50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 1.5e-148
Identity = 270/308 (87.66%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTP TRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPGTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPL                                  TDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPL----------------------------------TDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           G+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 274

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 274

[Close]

BLAST of Spg022922 vs. ExPASy Swiss-Prot
Match: B1A976 (50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 1.9e-148
Identity = 271/308 (87.99%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPL                                  TDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPL----------------------------------TDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 274

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 274

[Close]

BLAST of Spg022922 vs. ExPASy TrEMBL
Match: A0A540KI38 (Ribosomal_L2_C domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_040580 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.4e-172
Identity = 306/308 (99.35%), Postives = 307/308 (99.68%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+A
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGKA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 308

[Close]

BLAST of Spg022922 vs. ExPASy TrEMBL
Match: A0A5C7GQ61 (50S ribosomal protein L2, chloroplastic OS=Acer yangbiense OX=1000413 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 2.9e-171
Identity = 304/308 (98.70%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQK+ESTSTDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKDESTSTDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSA LKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSAALKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+PATPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKRPATPWGYPALGRRSRKRNKYSDN 300

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 308

[Close]

BLAST of Spg022922 vs. ExPASy TrEMBL
Match: A0A438GGK8 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A_1 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 3.8e-171
Identity = 305/308 (99.03%), Postives = 305/308 (99.03%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRRSRKRNKYSDN
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPALGRRSRKRNKYSDN 300

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 308

[Close]

BLAST of Spg022922 vs. ExPASy TrEMBL
Match: A0A649X4M7 (50S ribosomal protein L2, chloroplastic OS=Colvillea racemosa OX=191917 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 3.8e-171
Identity = 307/309 (99.35%), Postives = 307/309 (99.35%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSA-ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 180
           PIKMGNALPLSA ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT
Sbjct: 121 PIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 180

Query: 181 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR 240
           LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGR
Sbjct: 181 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGR 240

Query: 241 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 300
           AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD
Sbjct: 241 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 300

Query: 301 NLILRRRSK 309
           NLILRRRSK
Sbjct: 301 NLILRRRSK 309

[Close]

BLAST of Spg022922 vs. ExPASy TrEMBL
Match: A0A649X5G9 (50S ribosomal protein L2, chloroplastic OS=Zenia insignis OX=162940 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 3.8e-171
Identity = 307/309 (99.35%), Postives = 307/309 (99.35%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSA-ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 180
           PIKMGNALPLSA ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT
Sbjct: 121 PIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT 180

Query: 181 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR 240
           LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGR
Sbjct: 181 LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGR 240

Query: 241 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 300
           AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD
Sbjct: 241 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSD 300

Query: 301 NLILRRRSK 309
           NLILRRRSK
Sbjct: 301 NLILRRRSK 309

[Close]

BLAST of Spg022922 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 511.9 bits (1317), Expect = 3.5e-145
Identity = 263/308 (85.39%), Postives = 266/308 (86.36%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPL                                  TDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPL----------------------------------TDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           G+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ 
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGYPALGRRTRKRKKYSET 274

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 274

[Close]

BLAST of Spg022922 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 511.9 bits (1317), Expect = 3.5e-145
Identity = 263/308 (85.39%), Postives = 266/308 (86.36%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 180
           PIKMGNALPL                                  TDMPLGTAIHNIEITL
Sbjct: 121 PIKMGNALPL----------------------------------TDMPLGTAIHNIEITL 180

Query: 181 GKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA 240
           G+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Sbjct: 181 GRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 240

Query: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDN 300
           GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ 
Sbjct: 241 GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGYPALGRRTRKRKKYSET 274

Query: 301 LILRRRSK 309
           LILRRRSK
Sbjct: 301 LILRRRSK 274

[Close]

BLAST of Spg022922 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 115.2 bits (287), Expect = 9.6e-26
Identity = 61/126 (48.41%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 167 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVG 226
           M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G
Sbjct: 68  MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127

Query: 227 QVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPAT---PW 286
            V N     K L +AG   WLG RP VRGV MNP DHPHGGGEG++     +  T   PW
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPW 187

Query: 287 GYPALG 289
           G P  G
Sbjct: 188 GKPCKG 193

[Close]

BLAST of Spg022922 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 115.2 bits (287), Expect = 9.6e-26
Identity = 61/126 (48.41%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 167 MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVG 226
           M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G
Sbjct: 68  MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127

Query: 227 QVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPAT---PW 286
            V N     K L +AG   WLG RP VRGV MNP DHPHGGGEG++     +  T   PW
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPW 187

Query: 287 GYPALG 289
           G P  G
Sbjct: 188 GKPCKG 193

[Close]

BLAST of Spg022922 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 93.2 bits (230), Expect = 3.9e-19
Identity = 81/266 (30.45%), Postives = 113/266 (42.48%), Query Frame = 0


Query: 51  HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHP 110
           HR G  K  +R +D+      + G +  I +DP R A +  + +        +K   +  
Sbjct: 23  HRKGPAK--FRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAA 82

Query: 111 RGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTST 170
            G   G  +  G +  + +GN LPL +I                                
Sbjct: 83  EGMYTGQYLYCGKKANLMVGNVLPLGSI-------------------------------- 142

Query: 171 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCSAT 230
             P G  I N+E+ +G  G LARA+G  A +IA   +S T  +KLPSG  +++   C A 
Sbjct: 143 --PEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAM 202

Query: 231 VGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE----GR 290
           +GQV   G  +K L +AG+          CW    PVVRGV MNPV+HPHGGG     G 
Sbjct: 203 IGQVAGGGRTEKPLLKAGNAYHKYKAKRNCW----PVVRGVAMNPVEHPHGGGNHQHIGH 248

Query: 291 APIGR--KKPATPWGYPALGRRSRKR 295
           A   R  K      G  A  R  R+R
Sbjct: 263 ASTVRRDKSAGAKVGQIAARRTGRRR 248

The following BLAST results are available for this feature:

BLAST of Spg022922 vs. NCBI nr


Match Name	E-value	Identity	Description
TQD73878.1	7.1e-172	99.35	hypothetical protein C1H46_040580 [Malus baccata]	[more]
TXG46675.1	6.0e-171	98.70	hypothetical protein EZV62_027830 [Acer yangbiense]	[more]
RVW36222.1	7.8e-171	99.03	50S ribosomal protein L2, chloroplastic [Vitis vinifera] >RVW71330.1 50S ribosom...	[more]
YP_009715437.1	7.8e-171	99.35	ribosomal protein L2 [Colvillea racemosa] >YP_009715457.1 ribosomal protein L2 [...	[more]
QQL04985.1	3.9e-170	99.03	ribosomal protein L2 [Ammopiptanthus nanus] >QQL05006.1 ribosomal protein L2 [Am...	[more]

BLAST of Spg022922 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZK5	9.3e-151	88.96	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=...	[more]
Q09MB2	3.9e-149	87.66	50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=...	[more]
Q0ZIX7	6.7e-149	87.99	50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=...	[more]
Q2L944	1.5e-148	87.66	50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl2-A ...	[more]
B1A976	1.9e-148	87.99	50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 ...	[more]

BLAST of Spg022922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A540KI38	3.4e-172	99.35	Ribosomal_L2_C domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_040...	[more]
A0A5C7GQ61	2.9e-171	98.70	50S ribosomal protein L2, chloroplastic OS=Acer yangbiense OX=1000413 GN=rpl2 PE...	[more]
A0A438GGK8	3.8e-171	99.03	50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A_1 P...	[more]
A0A649X4M7	3.8e-171	99.35	50S ribosomal protein L2, chloroplastic OS=Colvillea racemosa OX=191917 GN=rpl2 ...	[more]
A0A649X5G9	3.8e-171	99.35	50S ribosomal protein L2, chloroplastic OS=Zenia insignis OX=162940 GN=rpl2 PE=3...	[more]

BLAST of Spg022922 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00830.1	3.5e-145	85.39	ribosomal protein L2	[more]
ATCG01310.1	3.5e-145	85.39	ribosomal protein L2	[more]
AT2G44065.1	9.6e-26	48.41	Ribosomal protein L2 family	[more]
AT2G44065.2	9.6e-26	48.41	Ribosomal protein L2 family	[more]
AT3G51190.1	3.9e-19	30.45	Ribosomal protein L2 family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 122..285 e-value: 5.7E-73 score: 258.4
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 166..283 e-value: 8.1E-49 score: 165.0
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 40..116 e-value: 1.6E-35 score: 134.0
IPR002171	Ribosomal protein L2	PIRSF	PIRSF002158	RPL2p_RPL2a_RPL8e_RPL2o	coord: 163..308 e-value: 2.9E-52 score: 175.5 coord: 13..138 e-value: 2.2E-27 score: 94.0
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 3..138
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 165..306
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 40..116 e-value: 1.5E-29 score: 101.8
None	No IPR available	GENE3D	2.40.50.140		coord: 1..112 e-value: 2.5E-39 score: 136.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR13691:SF51	50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC	coord: 165..306
None	No IPR available	PANTHER	PTHR13691:SF51	50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC	coord: 3..138
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 228..307 e-value: 2.7E-34 score: 119.1
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 116..227 e-value: 9.4E-36 score: 123.6
IPR005880	Ribosomal protein L2, bacterial/organellar-type	TIGRFAM	TIGR01171	TIGR01171	coord: 165..307 e-value: 1.3E-63 score: 213.0
IPR005880	Ribosomal protein L2, bacterial/organellar-type	HAMAP	MF_01320_B	Ribosomal_L2_B	coord: 1..307 score: 43.061356
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 250..261
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 166..305
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 2..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022922.1	Spg022922.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003723	RNA binding