Spg022904 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022904
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Autophagy-related protein
Location	scaffold64: 84196 .. 88557 (-)
RNA-Seq Expression	Spg022904
Synteny	Spg022904

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGTGGGTCTCCGAGATCCTTTCGATGACCTATGTTGTGTTGAAGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAACGGAACCGGGGAAAGTATACAGAAAAGACAGTTCTTTTCTATTCTATTAGTATTAGATTAGTATTAGTTAGTGATCTCGGCTCAGTGAGTCCTTTCTTCCGTGATGAACTGTTGGCACCAGTCCTCCATTTTGTCTCTGTGGATCGAGGAGAAAGGGGGCTCGGCGGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGGTCAACCTCTTTCAAATATACAACATGGATTCTGGCAATGCAATGTAGTTGGACTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGGTAGGACATGTATTTCTATTACTATGAAATTCATAAATGAAGTAGTTAATGGTGGGGTTACCATTATCCTTTTTGCAATGACGAATCTTGTATGTGTTCCGAAGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAAGAGATGTAACTCCAGTTCCTTCGGAAATGGTAAGATCTTTGGCACAAGAAGAAGGGGTTGATCCGTATCATCTTGACTGGGTTCTGATTTCTCTATTTTTTTTTAATAATACCGAGTTGGGTTCTTTTCCTACCCGTATCGAATAGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAGGAGCAGTTGACAATTGAATCCAATTTTTCCCATTATTTTCATTTTCGTATCCGTAATAGTGCGAAAAGAAGGAAGGCCCAATTCCAAGTTGTTCGAGAATAGTGGCGTTGAGTTTCTCGACCCTTTGCCTTAGGATTAGTCAGTTCTATTTCTCGATGGGGGCAAGGGAAGGGATATAACTCAGCGGTAGAGTGTCGCCTTGACGTGGCGGAAGTCATCAGTTCGAGCCTGATTATCCCTAAACCCAATGTGAGTTTTTCGATTTTTACTTGCTCCCCCGCCGTGATCGAATGAGAATGGATAAGAGGCTCGTGGGATTGACGTGAGGGGGTGGGGATGGCTATATTTCTGGGAGCGAACTCCAGGCGAATATGAAGCGCATGGATACAAGTTATGCCTTGGAATGAAAGACAATTCCGAATTAGCTTTGTCTACGAACAAGGAAGCTATAAGTAATGCAACTATGAATCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAGCTGGAAACGGCTGCTAATACCCCGTACGCTGAGGAGCAAAAGGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCACCGTTGAGGTTGGAACCCTGAGCAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGTAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATTCGTTCCCGGGCCTTGTACACACCGCCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAATGCTTGTTGGGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGTTAAACTTGGAGATGGAAGTCTTCTTTCGTTTCTCGACGGTGAAGTAAGACTAAGCTCATGAGCTTATTATCCTAGGTCGGAACAAGTTGATAGGATCCCCTTTTTTACGTCCCCATGTCCCTCCCGTGTGGCGACATGGGGGCGAAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGCTTTTGGCATAGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTCATGCTTTTCCCGGAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGTCTATTTATCTATCTCTTGACTCGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA

mRNA sequence

ATGAAAGACAATTCCGAATTAGCTTTGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA

Coding sequence (CDS)

ATGAAAGACAATTCCGAATTAGCTTTGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA

Protein sequence

MKDNSELALMNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAVRLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARHGVLLLFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFRRDQEIGSSRKKNVWLINNSLLGRRPPQSLRTPPISAMGCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDV

Homology

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BLAST of Spg022904 vs. NCBI nr
Match: KAF1876869.1 (hypothetical protein Lal_00033161 [Lupinus albus])

HSP 1 Score: 320.5 bits (820), Expect = 2.2e-83
Identity = 174/234 (74.36%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 72  MQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGA 131
           MQALSGMIGRKASVGGFLS PSNPRAQPWTGGGNYQAGV GANGIRYPSSPSRKRWILG 
Sbjct: 1   MQALSGMIGRKASVGGFLSSPSNPRAQPWTGGGNYQAGVGGANGIRYPSSPSRKRWILGV 60

Query: 132 VRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAVR--LPVI 191
           VRIDPC+AVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA     P  
Sbjct: 61  VRIDPCNAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEE 120

Query: 192 SRRKVR----MTSSHHAPYALGD--TRATMAGTKGRDPARHGVLLLFEPGFETKLLL--R 251
               V+    +    H  Y   D  +R+  AG  GR PAR  +  + E   +  +++   
Sbjct: 121 GEDDVKSSCPLCPGRHTCYNGRDKGSRSREAGPGGR-PARRAISSVVERAPDNCVVVPGL 180

Query: 252 RIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGL 296
           RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLEN YIPYQYMDSYLSSTGL
Sbjct: 181 RIDGAIQVRSNVDPTFYSLVGSGRSGGDHDGSSLLENSYIPYQYMDSYLSSTGL 233

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BLAST of Spg022904 vs. NCBI nr
Match: KAD5317821.1 (hypothetical protein E3N88_17767 [Mikania micrantha])

HSP 1 Score: 286.2 bits (731), Expect = 4.7e-73
Identity = 142/149 (95.30%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 35  GLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSPPSN 94
           G RHGPDSYGRQQWGIFRNGRKPDGAMPRG AAVIQRMQALSGMIGRKASVGGFLSPPSN
Sbjct: 9   GERHGPDSYGRQQWGIFRNGRKPDGAMPRG-AAVIQRMQALSGMIGRKASVGGFLSPPSN 68

Query: 95  PRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPG 154
           PRAQ WTGGGNYQAGVRGANGIR PS+PSRKRWILGAVRIDPCSAVANALSI PGETLPG
Sbjct: 69  PRAQLWTGGGNYQAGVRGANGIRCPSNPSRKRWILGAVRIDPCSAVANALSIQPGETLPG 128

Query: 155 LDMPRILLKERGAFGNADTGGAWLSSARA 184
           LDMPRILLKERGAF NADTGGAWLSSARA
Sbjct: 129 LDMPRILLKERGAFRNADTGGAWLSSARA 156

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BLAST of Spg022904 vs. NCBI nr
Match: OIV94276.1 (hypothetical protein TanjilG_00025 [Lupinus angustifolius])

HSP 1 Score: 278.5 bits (711), Expect = 9.8e-71
Identity = 182/355 (51.27%), Postives = 194/355 (54.65%), Query Frame = 0


Query: 1   MKDNSELAL-MNAGGMLNTCKS---------DGKWCFQWRTAT-------LGLRHGPDSY 60
           MK+NSE AL  N  G+ N  ++         D +W               L   HGPDSY
Sbjct: 40  MKENSESALSTNKEGISNVTRNLMESSILAQDERWRHALHVQVRREVVFPLANGHGPDSY 99

Query: 61  GRQQWGIFRNGRKPDGAMPRG-----AAAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQ 120
           GRQQWGIFRNGRKPDGAMPRG     AA V QRMQALSGMIGRKAS+GGFLS PSNPRAQ
Sbjct: 100 GRQQWGIFRNGRKPDGAMPRGANSVPAAVVTQRMQALSGMIGRKASIGGFLSSPSNPRAQ 159

Query: 121 PWTGGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMP 180
           PWTGGGNYQAGV                                        TLPGLDMP
Sbjct: 160 PWTGGGNYQAGV---------------------------------------GTLPGLDMP 219

Query: 181 RILLKERGAFGNADTGGAWLSSARAV--------------RLPVISRRK----------- 240
           RILLKERGAFGNADTGGAWLSSARA                 P+   R            
Sbjct: 220 RILLKERGAFGNADTGGAWLSSARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSR 279

Query: 241 ------VRMTSSHH-APYALGDTRATMAGTKGRDPARHGVLLLFEPGFE------TKLLL 296
                    T  HH A  +      T   T G   AR   L   E   E      ++++ 
Sbjct: 280 SREGELTPKTRPHHTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVT 339

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BLAST of Spg022904 vs. NCBI nr
Match: KAD3336706.1 (hypothetical protein E3N88_32225 [Mikania micrantha])

HSP 1 Score: 276.9 bits (707), Expect = 2.8e-70
Identity = 136/152 (89.47%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 32  ATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSP 91
           ATLGLR GPDSYGRQQWG FRNGRKPDGAMP G AAVIQRMQALSGMIGRKASVGGFLSP
Sbjct: 66  ATLGLRLGPDSYGRQQWGNFRNGRKPDGAMPHGVAAVIQRMQALSGMIGRKASVGGFLSP 125

Query: 92  PSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGET 151
           PSNPRAQ W GGGNYQAGVRGANGIR P+SPS KRWILG VRIDPCS VANALSIPP ET
Sbjct: 126 PSNPRAQLWIGGGNYQAGVRGANGIRCPNSPSCKRWILGVVRIDPCSVVANALSIPPRET 185

Query: 152 LPGLDMPRILLKERGAFGNADTGGAWLSSARA 184
             GLDMPRILLKERG+FGNADTGGAWLSSA A
Sbjct: 186 FQGLDMPRILLKERGSFGNADTGGAWLSSAHA 217

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BLAST of Spg022904 vs. NCBI nr
Match: KAF1876761.1 (hypothetical protein Lal_00044212 [Lupinus albus])

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-62
Identity = 128/150 (85.33%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 72  MQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGA 131
           MQALSGMIGRKASVGGFLS PSNPRAQPWTGGGNYQAGV GANGIRYPSSPSRKRWILG 
Sbjct: 1   MQALSGMIGRKASVGGFLSSPSNPRAQPWTGGGNYQAGVGGANGIRYPSSPSRKRWILGV 60

Query: 132 VRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAVRLPVISR 191
           VRIDPC+AVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA        
Sbjct: 61  VRIDPCNAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEE 120

Query: 192 RKVRMTSSHHAPYALGDTRATMAGTKGRDP 222
            +  + SS   PYALGDTRATMAGTK RDP
Sbjct: 121 GEDDVKSS--CPYALGDTRATMAGTKDRDP 148

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BLAST of Spg022904 vs. ExPASy Swiss-Prot
Match: Q49KT9 (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.0e-26
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 233 GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSS 292
           GFETK LLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD  GSSLLENPYIPYQ MDSYLSS
Sbjct: 44  GFETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQCMDSYLSS 103

Query: 293 TGLEKAAINR 303
           TGL  A++ +
Sbjct: 104 TGLGSASMGK 113

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BLAST of Spg022904 vs. ExPASy Swiss-Prot
Match: Q85WV9 (Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.3e-21
Identity = 52/69 (75.36%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 229 LFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYQY 288
           LFEPGF T+L+LRRIDGAIQVRSN DPTFYS V  G  GG    H GSSLLENPYIPYQ 
Sbjct: 7   LFEPGFGTELILRRIDGAIQVRSNADPTFYSFVDLGGPGGPVVIHHGSSLLENPYIPYQC 66

Query: 289 MDSYLSSTG 295
           MD YLS TG
Sbjct: 67  MDGYLSGTG 75

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BLAST of Spg022904 vs. ExPASy Swiss-Prot
Match: P52807 (Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 6.2e-20
Identity = 51/69 (73.91%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 229 LFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYQY 288
           L EPGF T+L+LRRIDGAIQVRSN DPTFYS V  G  G     HLGSSLLENPYIPYQ 
Sbjct: 7   LCEPGFGTELILRRIDGAIQVRSNTDPTFYSFVDLGGPGVPVVIHLGSSLLENPYIPYQC 66

Query: 289 MDSYLSSTG 295
           MD YLS TG
Sbjct: 67  MDGYLSGTG 75

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BLAST of Spg022904 vs. ExPASy Swiss-Prot
Match: P03938 (Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 2.5e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 237 KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGG 269
           KLLLRRIDGAIQVRS+VD TFYSLVGSGRSGG
Sbjct: 15  KLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGG 46

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BLAST of Spg022904 vs. ExPASy Swiss-Prot
Match: Q6L3C9 (Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.5e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 237 KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGG 269
           KLLLRRIDGAIQVRS+VD TFYSLVGSGRSGG
Sbjct: 15  KLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGG 46

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BLAST of Spg022904 vs. ExPASy TrEMBL
Match: A0A2N9HP93 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41670 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 8.2e-148
Identity = 300/450 (66.67%), Postives = 312/450 (69.33%), Query Frame = 0


Query: 7   LALMNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAA 66
           L+ MNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRG A
Sbjct: 40  LSRMNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRG-A 99

Query: 67  AVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKR 126
           AVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKR
Sbjct: 100 AVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKR 159

Query: 127 WILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAV-- 186
           WILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA   
Sbjct: 160 WILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAG 219

Query: 187 -------------------RLPVISRRKVRMTSSHHAPYALGDTRATM------------ 246
                              R    + R    T+ +  P  +   R TM            
Sbjct: 220 DKPEEGEDDVKSSCPLCPGRHTCYNGRDKGHTAVNSFPGLVHTARHTMGAGHARSRYLNH 279

Query: 247 --------------------------------------------------------AGTK 306
                                                                   AG  
Sbjct: 280 KEGDAEGRASDWSEVVTRSEQVDRIPFFSPPCRHTGGTWERKKGKERDGVSLAFGIAGPG 339

Query: 307 GRDPARHGVLLLFEPGFETKLLL--RRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSL 364
           GR PAR  +  + E   +  +++   RIDGAIQVRSNVDPTFYS+VGSGRSGGDH GSSL
Sbjct: 340 GR-PARRAISSVVERAPDNCVVVPGLRIDGAIQVRSNVDPTFYSIVGSGRSGGDHHGSSL 399

[Close]

BLAST of Spg022904 vs. ExPASy TrEMBL
Match: A0A2N9GIA5 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 2.4e-139
Identity = 285/402 (70.90%), Postives = 297/402 (73.88%), Query Frame = 0


Query: 1   MKDNSELALMNAGGMLNTCKSDG-KWCFQWR-------------TATLGLRHGPDSYGRQ 60
           MKDNSE AL      ++  ++ G K C   +               TLGLRHGPDSYGRQ
Sbjct: 338 MKDNSESALFTNKEAISESEAHGYKLCLGMKDNSESALFTNKEAITTLGLRHGPDSYGRQ 397

Query: 61  QWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNY 120
           QWGIFRNGRKPDGAMPRG AAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNY
Sbjct: 398 QWGIFRNGRKPDGAMPRG-AAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNY 457

Query: 121 QAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERG 180
           QAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERG
Sbjct: 458 QAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERG 517

Query: 181 AFGNADTGGAWLSSARAV--------------RLPVISRRKV---RMTSSHHAPYALGDT 240
           AFGNADTGGAWLSSARA                 P+   R          H A  +    
Sbjct: 518 AFGNADTGGAWLSSARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGHTAVNSFPGL 577

Query: 241 RATMAGTKGRDPARHGVLLLFEPGFE------TKLLLRRIDGAIQVRSNVDPTFYSLVGS 300
             T   T G   AR   L   E   E      ++++ RRIDGAIQVRSNVDPTFYS+VGS
Sbjct: 578 VHTARHTMGAGHARSRYLNHKEGDAEGRASDWSEVVTRRIDGAIQVRSNVDPTFYSIVGS 637

Query: 301 GRSGGDHLGSSLLENPYIPYQYMDSYLSST--GLEKAAINRIFLILPSRKRKEEREILFP 360
           GRSGGDH GSSLLENPYIPYQYMDSYLSST  GLEKAAINRIFLILP   RKEE EILFP
Sbjct: 638 GRSGGDHHGSSLLENPYIPYQYMDSYLSSTGLGLEKAAINRIFLILPF--RKEEVEILFP 697

Query: 361 FFRRDQEIGSSRKKNVWLINNSLLGRRPPQSLRTPPISAMGC 364
            FRRDQEIGSS KKN WLINNSLLG RPPQSLR PPISAMGC
Sbjct: 698 -FRRDQEIGSSHKKNAWLINNSLLGLRPPQSLRMPPISAMGC 735

[Close]

BLAST of Spg022904 vs. ExPASy TrEMBL
Match: A0A2N9HJI4 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39743 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 6.1e-119
Identity = 248/373 (66.49%), Postives = 255/373 (68.36%), Query Frame = 0


Query: 1   MKDNSELAL------------------------MNAGGMLNTCKSDGKWCFQWRTATLGL 60
           MKDNSE AL                        MNAGGMLNTCKSDGKWCFQWRTATLGL
Sbjct: 88  MKDNSESALFTNKEAISNATMNLMESSILAGSGMNAGGMLNTCKSDGKWCFQWRTATLGL 147

Query: 61  RHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSPPSNPR 120
           RHGPDSYGRQQWGIFRNGRKPDGAMPRG AAVIQRMQALSGMIGRKASVGGFLSPPSNPR
Sbjct: 148 RHGPDSYGRQQWGIFRNGRKPDGAMPRG-AAVIQRMQALSGMIGRKASVGGFLSPPSNPR 207

Query: 121 AQPWTGGGNYQAG----------VRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSI 180
           AQPWTGGGNYQAG           RGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSI
Sbjct: 208 AQPWTGGGNYQAGQAVETTKLEFPRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSI 267

Query: 181 PPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAV--------------RLPVISRR 240
           PPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA                 P+   R
Sbjct: 268 PPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEEGEDDVKSSCPLCPGR 327

Query: 241 K------VRMTSSHHAPYALGDTRATMAG-------TKGRDPARHGVLLLFEPGFE---- 300
                  ++  S   A    G       G       T G   AR   L   E   E    
Sbjct: 328 HTLQLACMKPESLVIAGQPYGGEFVPFPGLVHTARHTMGAGHARSRYLNHKEGDAEGRAS 387

Query: 301 ------TKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSY 303
                 T    RRIDGAIQVRSNVDPTFYS+VGSGRSGGDH GSSLLENPYIPYQYMDSY
Sbjct: 388 DWSEVVTSSRTRRIDGAIQVRSNVDPTFYSIVGSGRSGGDHHGSSLLENPYIPYQYMDSY 447

[Close]

BLAST of Spg022904 vs. ExPASy TrEMBL
Match: A0A2N9G477 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22061 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 8.6e-97
Identity = 216/341 (63.34%), Postives = 234/341 (68.62%), Query Frame = 0


Query: 31   TATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLS 90
            T+TLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRG AAVIQRMQALSGMIGRKASVGGFLS
Sbjct: 3146 TSTLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRG-AAVIQRMQALSGMIGRKASVGGFLS 3205

Query: 91   PPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGE 150
            PPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGE
Sbjct: 3206 PPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGE 3265

Query: 151  TLPGLDMPRILLKERGAFGNADTGGAWLSSARAVR--LPVISRRKVR----MTSSHHAPY 210
            TLPGLDMPRILLKERGAFGNADTGGAWLSSARA     P      V+    +    H  Y
Sbjct: 3266 TLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEEGEDDVKSSCPLCPGRHTCY 3325

Query: 211  ALGDTRA-TMAGTKGRDPARHGVLLLFEPGFE------------TKL----LLRRIDGAI 270
               D  + +  G  G  P +  + L+   G               KL    LL  +DG +
Sbjct: 3326 NGRDKGSRSREGAAGSPPFQGELTLVGYFGLTLLHTQKEASYVWVKLGDGSLLSFLDGEV 3385

Query: 271  QVRSNVDPTFYSLVGSGRSGGDHLGSSLL-ENPYIPYQYMDSYLSSTGLEKAAINRIFLI 330
            + +   + T +      R        S   +   +P++           EKAAINRIFLI
Sbjct: 3386 RPQWEENKTEHRTTYLHRPRTTRAPLSFWGDGGIVPFEPWGHAFPEA--EKAAINRIFLI 3445

Query: 331  LPSRKRKEEREILFPFFRRDQEIGSSRKKNVWLINNSLLGR 348
            LP   RKEE EILFP FRRDQEIGSS KKN WLINNSLLGR
Sbjct: 3446 LPF--RKEEVEILFP-FRRDQEIGSSHKKNAWLINNSLLGR 3480

[Close]

BLAST of Spg022904 vs. ExPASy TrEMBL
Match: A0A6A5MVI7 (Uncharacterized protein ycf68 OS=Lupinus albus OX=3870 GN=Lal_00033161 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 174/234 (74.36%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 72  MQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGA 131
           MQALSGMIGRKASVGGFLS PSNPRAQPWTGGGNYQAGV GANGIRYPSSPSRKRWILG 
Sbjct: 1   MQALSGMIGRKASVGGFLSSPSNPRAQPWTGGGNYQAGVGGANGIRYPSSPSRKRWILGV 60

Query: 132 VRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAVR--LPVI 191
           VRIDPC+AVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA     P  
Sbjct: 61  VRIDPCNAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEE 120

Query: 192 SRRKVR----MTSSHHAPYALGD--TRATMAGTKGRDPARHGVLLLFEPGFETKLLL--R 251
               V+    +    H  Y   D  +R+  AG  GR PAR  +  + E   +  +++   
Sbjct: 121 GEDDVKSSCPLCPGRHTCYNGRDKGSRSREAGPGGR-PARRAISSVVERAPDNCVVVPGL 180

Query: 252 RIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGL 296
           RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLEN YIPYQYMDSYLSSTGL
Sbjct: 181 RIDGAIQVRSNVDPTFYSLVGSGRSGGDHDGSSLLENSYIPYQYMDSYLSSTGL 233

The following BLAST results are available for this feature:

BLAST of Spg022904 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1876869.1	2.2e-83	74.36	hypothetical protein Lal_00033161 [Lupinus albus]	[more]
KAD5317821.1	4.7e-73	95.30	hypothetical protein E3N88_17767 [Mikania micrantha]	[more]
OIV94276.1	9.8e-71	51.27	hypothetical protein TanjilG_00025 [Lupinus angustifolius]	[more]
KAD3336706.1	2.8e-70	89.47	hypothetical protein E3N88_32225 [Mikania micrantha]	[more]
KAF1876761.1	1.3e-62	85.33	hypothetical protein Lal_00044212 [Lupinus albus]	[more]

BLAST of Spg022904 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KT9	2.0e-26	85.71	Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN...	[more]
Q85WV9	4.3e-21	75.36	Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1	[more]
P52807	6.2e-20	73.91	Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1	[more]
P03938	2.5e-08	93.75	Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2	[more]
Q6L3C9	2.5e-08	93.75	Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1	[more]

BLAST of Spg022904 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9HP93	8.2e-148	66.67	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41670 PE=3...	[more]
A0A2N9GIA5	2.4e-139	70.90	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3...	[more]
A0A2N9HJI4	6.1e-119	66.49	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39743 PE=3...	[more]
A0A2N9G477	8.6e-97	63.34	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22061 PE=3...	[more]
A0A6A5MVI7	1.1e-83	74.36	Uncharacterized protein ycf68 OS=Lupinus albus OX=3870 GN=Lal_00033161 PE=3 SV=1	[more]

BLAST of Spg022904 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022546	Uncharacterised protein family Ycf68	PFAM	PF10839	DUF2647	coord: 236..269 e-value: 1.6E-17 score: 63.3
IPR022546	Uncharacterised protein family Ycf68	PANTHER	PTHR34890	FAMILY NOT NAMED	coord: 199..336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022904.1	Spg022904.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0042301	phosphate ion binding