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Spg022885 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCACCAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGGTTGGTTATTCGTCAGCACGGGTTTAGCTTACGATGTTTTTGGAAGCCCTCGTCCAAATGAGTATTTTACAGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGGAACAACTCGATGAATTTAGTAGATCTTTTTAGGAGGACCAAATGACTATCGATAAAACTTATCCTATTTTTACAGTGCGATGGTTGGCTGTTCACGGACTAGCTGTACCTACCGTTTCTTTTTTAGGGTCAATATCAGCAATGCAGTTCATCCAACGATAAACCTAATCCGAATTATAGAGCTATGACACAATCAAATCCGAACGAACAAAATGTTGAATTGAATCGTACCAGTCTTTACTGGGGGTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTATTTCTTCAATTAAATAAAAGAAAATACTAAATAATAGTACGAATTATCGTATCCCATTCGGAAGGATATCATCTCATAATTATCTATGACTGTTTCTGTCTCTAGCACGACCACTTGATGAAATGGGGAGGGAAGTGGGACAAATGGCCGAGACTACTGGAAGGATTCCTCTTTGGATAATAGGTACTGTAACTGGTATTCCTGTGATCGGTTTAATCGGTATTTTCTTTTATGGTTCATATTCTGGATTAGGTTCATCTCTGTAA ATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCACCAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGGTTGGTTATTCGTCAGCACGGGTTTAGCTTACGATGTTTTTGGAAGCCCTCGTCCAAATGAGTATTTTACAGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTACTGTAACTGGTATTCCTGTGATCGGTTTAATCGGTATTTTCTTTTATGGTTCATATTCTGGATTAGGTTCATCTCTGTAA ATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCACCAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGGTTGGTTATTCGTCAGCACGGGTTTAGCTTACGATGTTTTTGGAAGCCCTCGTCCAAATGAGTATTTTACAGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTACTGTAACTGGTATTCCTGTGATCGGTTTAATCGGTATTTTCTTTTATGGTTCATATTCTGGATTAGGTTCATCTCTGTAA MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRTVTGIPVIGLIGIFFYGSYSGLGSSL Homology
BLAST of Spg022885 vs. NCBI nr
Match: KAF4396260.1 (hypothetical protein F8388_019806 [Cannabis sativa]) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36 Identity = 88/132 (66.67%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Spg022885 vs. NCBI nr
Match: YP_009427831.1 (photosystem II protein V [Circaeaster agrestis] >ASV47707.1 photosystem II protein V [Circaeaster agrestis] >QKI32424.1 photosystem II cytochrome b559 alpha subunit [Circaeaster agrestis] >QKI32509.1 photosystem II cytochrome b559 alpha subunit [Circaeaster agrestis] >QKI32594.1 photosystem II cytochrome b559 alpha subunit [Circaeaster agrestis] >QKI32679.1 photosystem II cytochrome b559 alpha subunit [Circaeaster agrestis]) HSP 1 Score: 144.4 bits (363), Expect = 4.9e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. NCBI nr
Match: YP_009574933.1 (cytochrome b559 subunit alpha [Aristolochia macrophylla] >QBI76414.1 cytochrome b559 subunit alpha [Aristolochia macrophylla]) HSP 1 Score: 144.4 bits (363), Expect = 4.9e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. NCBI nr
Match: YP_009417545.1 (photosystem II cytochrome b559 alpha subunit [Erythronium sibiricum] >AQD17403.1 photosystem II cytochrome b559 alpha subunit [Erythronium sibiricum]) HSP 1 Score: 144.4 bits (363), Expect = 4.9e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. NCBI nr
Match: QYA18126.1 (photosystem II cytochrome b559 subunit alpha [Urtica angustifolia]) HSP 1 Score: 144.4 bits (363), Expect = 4.9e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy Swiss-Prot
Match: Q3V518 (Cytochrome b559 subunit alpha OS=Acorus calamus OX=4465 GN=psbE PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 6.4e-34 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy Swiss-Prot
Match: Q70XY9 (Cytochrome b559 subunit alpha OS=Amborella trichopoda OX=13333 GN=psbE PE=3 SV=3) HSP 1 Score: 144.4 bits (363), Expect = 6.4e-34 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy Swiss-Prot
Match: P56779 (Cytochrome b559 subunit alpha OS=Arabidopsis thaliana OX=3702 GN=psbE PE=1 SV=4) HSP 1 Score: 144.4 bits (363), Expect = 6.4e-34 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy Swiss-Prot
Match: P59702 (Cytochrome b559 subunit alpha OS=Atropa belladonna OX=33113 GN=psbE PE=3 SV=3) HSP 1 Score: 144.4 bits (363), Expect = 6.4e-34 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy Swiss-Prot
Match: P69382 (Cytochrome b559 subunit alpha OS=Beta vulgaris OX=161934 GN=psbE PE=3 SV=2) HSP 1 Score: 144.4 bits (363), Expect = 6.4e-34 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy TrEMBL
Match: A0A7J6HPK4 (Cytochrome b559 subunit alpha OS=Cannabis sativa OX=3483 GN=F8388_019806 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36 Identity = 88/132 (66.67%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy TrEMBL
Match: A0A343UJT0 (Cytochrome b559 subunit alpha OS=Asarum sieboldii OX=76098 GN=psbE PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.4e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy TrEMBL
Match: F1KLD9 (Cytochrome b559 subunit alpha OS=Fragaria vesca subsp. vesca OX=101020 GN=psbE PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.4e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy TrEMBL
Match: A0A0F6PYZ2 (Cytochrome b559 subunit alpha OS=Prunus subhirtella var. subhirtella OX=140660 GN=psbE PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.4e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. ExPASy TrEMBL
Match: A0A076EEJ0 (Cytochrome b559 subunit alpha OS=Salix interior OX=75712 GN=psbE PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.4e-31 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. TAIR 10
Match: ATCG00580.1 (photosystem II reaction center protein E ) HSP 1 Score: 144.4 bits (363), Expect = 4.6e-35 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Spg022885 vs. TAIR 10
Match: ATCG00550.1 (photosystem II reaction center protein J ) HSP 1 Score: 50.1 bits (118), Expect = 1.2e-06 Identity = 27/33 (81.82%), Postives = 27/33 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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