Spg022861 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022861
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	40S ribosomal S3-like protein
Location	scaffold2: 5046629 .. 5049156 (-)
RNA-Seq Expression	Spg022861
Synteny	Spg022861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCAGGCTCTCAGCGTTTTCTACGGTTTTATTCATCTTCAACCTAGTGTTCACGCAGCAGAGCGGTGAACGGCGACATCACCCCAGCAACCAAACATGGCAACTCAGATGAGCAAAAAGCGAAAGGTTGGTAATCAGTTTGCTTCTTCATCTTACATTTTTCACGACATACAAAACATTCTGCACATTTTGATGTTTACTTTACGGAACTTGTTTGATTCACTGGGATATAGTTCGTGGCCGATGGAGTGTTCTTCGCCGAGCTTAACGAAGTTCTTACCAGAGAACTTGCAGAGGATGGATACTCCGGAGTTGAGGTTAGGGTTACGCCTATGCGGACTGAAATTATCATTAGGGCTACTCGTACACAGAATGTTCTTGGTAACATTCTTTTCTCTCCTAGTTTTCATTTTTGTTTTCCTGCGAATTATTCGAATATATTTCGGAAGACGAGTCTGCTTTTATTCTCTATCAAGCTACCACTACGAGTTGAAGTGTGTATTAATCTATAATTGGAATCACATATAATTGTCACGACGTGGAATCTCAATTTTTAGGATTTGTAGAATCTTAGACAGGCTTATGGAATTGTGTTTAAGTGGGAATGCTTTGAGATTTGTGAAGTCATCAAAAATTGTGTTGGATGGTTGATGTTGAATTTACCATCAGTTAATACGGTGACTGGGGTTGGGGGCTAAGTACAATGTTCAGTCTAATCGTGTTTGTTCTTTGTTGGTGCTGGATATTTGACATAATTGGAGCTATTTGCTTGATTCGGGTATTAGAAAACACCTTGCTTCCGACGAAGTGAATTTGAAAATTTCAGCTAATAGCAGTTTCCTGTATCATATGTGGTGCATCATATTACTTGTTGAGCAATATAATTTTGGTGTTGCTTCCATTGCTTTTGGATCTGGTGTCTGACTATGCATTCAATCACGACTTCAGGTGAGAAAGGTAGGAGAATCAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGTTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGTTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGGTATGTAACAGAAATTATGGATGCTATGCTAGTATGGTGTGCGTGACTGCCTGTTGTAGTTTCTAGTTTGTGTTAGGCCTCCAATTATACACACTTATAAGAGAAAGGGCAAAGGGGGAAATGGCTCAGATTAACAGGTGGGGACCAGTTCTGTGAAGGGGCTGTGGAGCAGAGTAGTGCTTGTACGGATTGTCTGCTGGCTAGAGGGGTTTTGTAGGGGTTTTGGAAGAGAGAAAGGCAGTTTGTTGTGTTTGGCTTGGGTAATGCCTTTGGAGAGCTCTCAGCACTCTCGAATTGCTGGGGATTTATCATGTTGTTATCGTTTGGTTATTTTCCTTTGTATTGCTTATCGTTGGGTTGATGAATGCTGTTGTTGAACTCTTGTTTTACACTGTATCTTGTTTGGAAATCAATAGAACAGTGTCAGATAGCTTTGGAGGGGTCTTGGTGTTGTTTTCTTTTGTTCTTAACAGGTTATCGAGGGTGAATACCTAACAGTTTGATTGGAGACTTTCAATCTTAGGTGTTATATTACATAATAATGAAAGCATTCTTAGTGGATACTGATTGTTTTGTTTGGGATGGGACTGTTTTCACATGCTCAGCAATTTTTTTGGGCAATTGCTTCTTTTAAGTGTTACTTTTTCATCTTTCCAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCCAAGGGGTGCGAGGTCAGTATTAATTTTAATTGAATGACATTGGTTCCTAATGTCACTGAGGGCTAACTATCTTGTATATTCCATTTTTATTAAGCCGTGTTCTGAATTATGCAGGTTATTGTCAGTGGTAAGCTCAGGGCTCAGCGTGCAAAATCCATGAAATTCAAGGATGGTTACATGATTTCATCCGGACAGCCAGTGAAAGAGTACATAGACTCTGCCGTGAGACACGTTCTCCTTAGACAGGTCAGTATGACGCTCGAGCTTCATAGCTCTGCTATTATGCGGCATTCATTTTCTTGAATTGCATATGGGAGTGGTCTTTAATCAATGTCTTTGACTGATGTCTCTGTTTCTTTAATTTACAGGGTGTTCTAGGTATCAAGGTCAAGATCATGCTTGACTGGGACCCGAAGGGCAAGCAAGGTCCACCGACGCCCCTCCCCGACTTGGTTACTATTCATACTCCCAAGGAAGAAGAGGAGTTCATTAGGCCTGTGGCTGTGATTCCGGCCGAGATTGAGGTTCCACCAGCTTAAAAGAAGAAGAGCGAAGAAGAGCAGACATGAGAGCGAGCAAGTAGTCTAGTGTTTCTATTATAATGTCAATTTCTTTCAGAATATGGAATTCTAAGTTTTGTTGATGTCGTTTTTATTCTGTTTTGAGTTTTGATTTTGGCATGTTTTTGTTACAAATATTCACACAAA

mRNA sequence

ATGGCAACTCAGATGAGCAAAAAGCGAAAGTTCGTGGCCGATGGAGTGTTCTTCGCCGAGCTTAACGAAGTTCTTACCAGAGAACTTGCAGAGGATGGATACTCCGGAGTTGAGGTTAGGGTTACGCCTATGCGGACTGAAATTATCATTAGGGCTACTCGTACACAGAATGTTCTTGGTGAGAAAGGTAGGAGAATCAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGTTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGTTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGAGCTCTCAGCACTCTCGAATTGCTGGGGATTTATCATGTTGTTATCGTTTGGTTATTTTCCTTTGTATTGCTTATCGTTGGGTTGATGAATGCTGTTGTTGAACTCTTGTTTTACACTGTATCTTGTTTGGAAATCAATAGAACAGTGTCAGATAGCTTTGGAGGGGTCTTGGTGTTGTTTTCTTTTGTTCTTAACAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCCAAGGGGTGCGAGGTTATTGTCAGTGGTAAGCTCAGGGCTCAGCGTGCAAAATCCATGAAATTCAAGGATGGTTACATGATTTCATCCGGACAGCCAGTGAAAGAGTACATAGACTCTGCCGTGAGACACGTTCTCCTTAGACAGGGTGTTCTAGGTATCAAGGTCAAGATCATGCTTGACTGGGACCCGAAGGGCAAGCAAGGTCCACCGACGCCCCTCCCCGACTTGGTTACTATTCATACTCCCAAGGAAGAAGAGGAGTTCATTAGGCCTGTGGCTGTGATTCCGGCCGAGATTGAGGTTCCACCAGCTTAA

Coding sequence (CDS)

ATGGCAACTCAGATGAGCAAAAAGCGAAAGTTCGTGGCCGATGGAGTGTTCTTCGCCGAGCTTAACGAAGTTCTTACCAGAGAACTTGCAGAGGATGGATACTCCGGAGTTGAGGTTAGGGTTACGCCTATGCGGACTGAAATTATCATTAGGGCTACTCGTACACAGAATGTTCTTGGTGAGAAAGGTAGGAGAATCAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGTTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGTTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGAGCTCTCAGCACTCTCGAATTGCTGGGGATTTATCATGTTGTTATCGTTTGGTTATTTTCCTTTGTATTGCTTATCGTTGGGTTGATGAATGCTGTTGTTGAACTCTTGTTTTACACTGTATCTTGTTTGGAAATCAATAGAACAGTGTCAGATAGCTTTGGAGGGGTCTTGGTGTTGTTTTCTTTTGTTCTTAACAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCCAAGGGGTGCGAGGTTATTGTCAGTGGTAAGCTCAGGGCTCAGCGTGCAAAATCCATGAAATTCAAGGATGGTTACATGATTTCATCCGGACAGCCAGTGAAAGAGTACATAGACTCTGCCGTGAGACACGTTCTCCTTAGACAGGGTGTTCTAGGTATCAAGGTCAAGATCATGCTTGACTGGGACCCGAAGGGCAAGCAAGGTCCACCGACGCCCCTCCCCGACTTGGTTACTATTCATACTCCCAAGGAAGAAGAGGAGTTCATTAGGCCTGTGGCTGTGATTCCGGCCGAGATTGAGGTTCCACCAGCTTAA

Protein sequence

MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALSTLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFVLNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPAEIEVPPA

Homology

[Close]

BLAST of Spg022861 vs. NCBI nr
Match: XP_022149321.1 (40S ribosomal protein S3-3 [Momordica charantia])

HSP 1 Score: 416.8 bits (1070), Expect = 1.6e-112
Identity = 233/302 (77.15%), Postives = 233/302 (77.15%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 236

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIEVP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP AEIEV 
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVA 236

Query: 301 PA 302
            A
Sbjct: 301 AA 236

[Close]

BLAST of Spg022861 vs. NCBI nr
Match: XP_022953609.1 (40S ribosomal protein S3-3-like [Cucurbita moschata] >KAG6575449.1 40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013991.1 40S ribosomal protein S3-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.6 bits (1067), Expect = 3.6e-112
Identity = 232/302 (76.82%), Postives = 233/302 (77.15%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 236

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIEVP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEE+FIRPVAVIP AEIEV 
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAVIPTAEIEVE 236

Query: 301 PA 302
            A
Sbjct: 301 AA 236

[Close]

BLAST of Spg022861 vs. NCBI nr
Match: XP_023514160.1 (40S ribosomal protein S3-3 [Cucurbita pepo subsp. pepo] >KAG7025887.1 40S ribosomal protein S3-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.2 bits (1066), Expect = 4.7e-112
Identity = 232/302 (76.82%), Postives = 232/302 (76.82%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 236

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIEVP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRP AVIP AEIEV 
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEVA 236

Query: 301 PA 302
            A
Sbjct: 301 AA 236

[Close]

BLAST of Spg022861 vs. NCBI nr
Match: XP_023000220.1 (40S ribosomal protein S3-3 isoform X1 [Cucurbita maxima] >XP_023000222.1 40S ribosomal protein S3-3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 414.5 bits (1064), Expect = 8.0e-112
Identity = 232/302 (76.82%), Postives = 232/302 (76.82%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 236

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIEVP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIH PKEEEEFIRPVAVIP AEIEV 
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHIPKEEEEFIRPVAVIPTAEIEVA 236

Query: 301 PA 302
            A
Sbjct: 301 AA 236

[Close]

BLAST of Spg022861 vs. NCBI nr
Match: XP_023547512.1 (40S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.1 bits (1063), Expect = 1.0e-111
Identity = 231/302 (76.49%), Postives = 232/302 (76.82%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 236

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIEVP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEE+FIRP AVIP AEIEV 
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPAAVIPTAEIEVE 236

Query: 301 PA 302
            A
Sbjct: 301 AA 236

[Close]

BLAST of Spg022861 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.4e-103
Identity = 207/301 (68.77%), Postives = 220/301 (73.09%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRH 235

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPAEIEVPP 300
           VLLRQGVLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ +I P  V+     VP 
Sbjct: 241 VLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVPE 235

Query: 301 A 302
           A
Sbjct: 301 A 235

[Close]

BLAST of Spg022861 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.0e-101
Identity = 203/291 (69.76%), Postives = 211/291 (72.51%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRH 225

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAV 292
           VLLRQGVLGIKVK+MLDWDPKG  GP TPLPD+V IH+PKEEE    P  V
Sbjct: 241 VLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQV 225

[Close]

BLAST of Spg022861 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.6e-100
Identity = 200/288 (69.44%), Postives = 210/288 (72.92%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRH 222

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRP 289
           VLLRQGVLGIKVKIMLDWDP GK GP TPLPD+V IH PK++  +  P
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAP 222

[Close]

BLAST of Spg022861 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 1.4e-87
Identity = 183/282 (64.89%), Postives = 192/282 (68.09%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRH
Sbjct: 181 --RACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRH 216

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEE 283
           VLLRQGVLGIKVKIML WDP GK GP  PLPD V+I  PK+E
Sbjct: 241 VLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of Spg022861 vs. ExPASy Swiss-Prot
Match: P47835 (40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.4e-87
Identity = 183/282 (64.89%), Postives = 192/282 (68.09%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1   MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRH
Sbjct: 181 --RACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRH 216

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEE 283
           VLLRQGVLGIKVKIML WDP GK GP  PLPD V+I  PK+E
Sbjct: 241 VLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of Spg022861 vs. ExPASy TrEMBL
Match: A0A6J1D813 (40S ribosomal protein S3-3 OS=Momordica charantia OX=3673 GN=LOC111017761 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 7.8e-113
Identity = 233/302 (77.15%), Postives = 233/302 (77.15%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 236

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIEVP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP AEIEV 
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVA 236

Query: 301 PA 302
            A
Sbjct: 301 AA 236

[Close]

BLAST of Spg022861 vs. ExPASy TrEMBL
Match: A0A6J1GQ60 (40S ribosomal protein S3-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456093 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.7e-112
Identity = 232/302 (76.82%), Postives = 233/302 (77.15%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 236

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIEVP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEE+FIRPVAVIP AEIEV 
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAVIPTAEIEVE 236

Query: 301 PA 302
            A
Sbjct: 301 AA 236

[Close]

BLAST of Spg022861 vs. ExPASy TrEMBL
Match: A0A6J1HKZ2 (40S ribosomal protein S3-3 OS=Cucurbita moschata OX=3662 GN=LOC111464498 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 8.7e-112
Identity = 231/302 (76.49%), Postives = 231/302 (76.49%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 236

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIEVP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRP AV P AEIEV 
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVTPTAEIEVA 236

Query: 301 PA 302
            A
Sbjct: 301 AA 236

[Close]

BLAST of Spg022861 vs. ExPASy TrEMBL
Match: A0A0A0KCL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450550 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 4.3e-111
Identity = 228/298 (76.51%), Postives = 230/298 (77.18%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 232

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIP-AEIE 298
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIH+PKEEE+FIRPVAVIP  EIE
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEIE 232

[Close]

BLAST of Spg022861 vs. ExPASy TrEMBL
Match: A0A2I0VCV6 (40S ribosomal protein S3-3 OS=Dendrobium catenatum OX=906689 GN=RPS3C PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.1e-110
Identity = 224/301 (74.42%), Postives = 227/301 (75.42%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRH
Sbjct: 181 --RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRH 235

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPAEIEVPP 300
           VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIH PKEEEE+ RP   +P EIE PP
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHPPKEEEEYGRPSLTMPTEIEAPP 235

Query: 301 A 302
           A
Sbjct: 301 A 235

[Close]

BLAST of Spg022861 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-104
Identity = 207/301 (68.77%), Postives = 220/301 (73.09%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRH 235

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPAEIEVPP 300
           VLLRQGVLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ +I P  V+     VP 
Sbjct: 241 VLLRQGVLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVPE 235

Query: 301 A 302
           A
Sbjct: 301 A 235

[Close]

BLAST of Spg022861 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 369.8 bits (948), Expect = 2.1e-102
Identity = 203/291 (69.76%), Postives = 211/291 (72.51%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRH 225

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAV 292
           VLLRQGVLGIKVK+MLDWDPKG  GP TPLPD+V IH+PKEEE    P  V
Sbjct: 241 VLLRQGVLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQV 225

[Close]

BLAST of Spg022861 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 365.5 bits (937), Expect = 4.0e-101
Identity = 200/288 (69.44%), Postives = 210/288 (72.92%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRALS 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR    
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 120

Query: 121 TLELLGIYHVVIVWLFSFVLLIVGLMNAVVELLFYTVSCLEINRTVSDSFGGVLVLFSFV 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LNRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRH 240
             RACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRH
Sbjct: 181 --RACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRH 222

Query: 241 VLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRP 289
           VLLRQGVLGIKVKIMLDWDP GK GP TPLPD+V IH PK++  +  P
Sbjct: 241 VLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAP 222

The following BLAST results are available for this feature:

BLAST of Spg022861 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149321.1	1.6e-112	77.15	40S ribosomal protein S3-3 [Momordica charantia]	[more]
XP_022953609.1	3.6e-112	76.82	40S ribosomal protein S3-3-like [Cucurbita moschata] >KAG6575449.1 40S ribosomal...	[more]
XP_023514160.1	4.7e-112	76.82	40S ribosomal protein S3-3 [Cucurbita pepo subsp. pepo] >KAG7025887.1 40S riboso...	[more]
XP_023000220.1	8.0e-112	76.82	40S ribosomal protein S3-3 isoform X1 [Cucurbita maxima] >XP_023000222.1 40S rib...	[more]
XP_023547512.1	1.0e-111	76.49	40S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg022861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJA6	2.4e-103	68.77	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9M339	3.0e-101	69.76	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9SIP7	5.6e-100	69.44	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
P02350	1.4e-87	64.89	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
P47835	1.4e-87	64.89	40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1	[more]

BLAST of Spg022861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D813	7.8e-113	77.15	40S ribosomal protein S3-3 OS=Momordica charantia OX=3673 GN=LOC111017761 PE=3 S...	[more]
A0A6J1GQ60	1.7e-112	76.82	40S ribosomal protein S3-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456093 PE...	[more]
A0A6J1HKZ2	8.7e-112	76.49	40S ribosomal protein S3-3 OS=Cucurbita moschata OX=3662 GN=LOC111464498 PE=3 SV...	[more]
A0A0A0KCL9	4.3e-111	76.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450550 PE=3 SV=1	[more]
A0A2I0VCV6	2.1e-110	74.42	40S ribosomal protein S3-3 OS=Dendrobium catenatum OX=906689 GN=RPS3C PE=3 SV=1	[more]

BLAST of Spg022861 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35530.1	1.7e-104	68.77	Ribosomal protein S3 family protein	[more]
AT3G53870.1	2.1e-102	69.76	Ribosomal protein S3 family protein	[more]
AT2G31610.1	4.0e-101	69.44	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 93..122 e-value: 8.2E-6 score: 27.9
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 176..285 e-value: 4.9E-54 score: 183.7
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 181..257
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..93 e-value: 1.7E-12 score: 47.0
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 21..92 score: 11.333969
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 183..254 e-value: 5.6E-22 score: 78.0
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..91 e-value: 3.1E-48 score: 163.7
None	No IPR available	PANTHER	PTHR11760:SF52	40S RIBOSOMAL PROTEIN S3-RELATED	coord: 3..119
None	No IPR available	PANTHER	PTHR11760:SF52	40S RIBOSOMAL PROTEIN S3-RELATED	coord: 178..298
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 3..119
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 178..298
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 15..95 e-value: 6.326E-51 score: 160.851
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 213..249
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022861.1	Spg022861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome