Spg022719 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022719
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA annealing helicase and endonuclease ZRANB3
Location	scaffold2: 4639754 .. 4645403 (-)
RNA-Seq Expression	Spg022719
Synteny	Spg022719

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATGTCAGCCTCCCTGTCTTCCTGGAGCAGCTTTTGGGTATTAACCTGCGGACAAAAGGTTCCATTCTCGATCCTCCATTTGTCCACTGTATTAAAGTCTGGGTCCATGGGGCCTCTGTGAAATGCGTGCGCCGCTTCCGGCGAAAAGCTTCCATGAACTCTGGCGAGCCGGTTAATCAACAAATTCCCCTCCTCAAAGGTGACAATCTGGGTTTTGAAGATCTGGTCGTCCTCTACAATCTCGATTTCTCCAGGGATGAAGCCGCAGTAATTTCCTTTCACTCTTATCCCAACTTCCACACAATCAATGAGCAAGGAGTTAGGTTCAACATATTCAATAATGCCTCCCAAACAATCTCCAATAGCCTTAAATGTTTGCAAGTGCCATAAATGTAACCGGAGATTTCTAATTCTCACCCAACCCCCATAACTGGGCACCACATTAATTTTGCCATGAATGTTTTTGTTCCATCTTTCAACTTTAACAATGACAGGCCCAAAACTTACCCACCCCTTGTTTGTGGTTAATAAATTTGCCAAGTCCTTTGAAGGGCATTTTAGCAGAGCTTTATCTGGCTGGAAGGGGTTTATAACGAGGGTGGTCTCAAGCTGTTGCTGCATAATGTCAAGTATTCTTCCCCAATCGTCATGAAAGTCGCGTTTAGTAACGACTATAACCTCCTCCCAATCGATCTTTCTCACATCTATCCTACACGGTTTTTGGCCTTGGTATTCTACATTCCCTTGGCAGCTAGCGTTTATCACAGGGGGGTGCAAGGTACCGTTGTTCTATTTAGGAATAATAATCTCAGCATAGGATTTCTTTCGGAATTTCTGGTTGTTTGGTTGTTTCTCTTTTTCCTTCAACACCTTCCCGACGACGAAATCTTTCAATAAATTTGCAAAGGCTAGCCATCCCTTGAAATCTATCCCAGTTGGAACCACAAGGTTGTTCTTTCCCCCTGAGTTAGCTACTTTGGTAATCTCTAAAAAACTCCCCCTTTTGTTGGTGATTTTCTGAATCCAGATGAAGTCGTTTTTGCAATCAGTCTTGCAGAAGAATTTCTGAGTTGATGGCGCTAGGAGGAGATCATCTATCGCATCGAAGATCCAAACAATCACTACTTCTTCAGCAGATAAGTAAAACCTTCTTCTCCTATGGTCTTCAGTGATTCTAACAACCCTCCCTTTAAAGTTTCGATGAAAACCACAGGAAAAAACCTTGCTTTCTATCTTCACCGACCCCTGTCAAACAGAGGCCATATTGACTTAAAACTCGAGCTCTACGGCGAAGATGATAACTTCTATTTCCATGAACCTCCTTCTAGGAAAAACCCTACCCTCCCCACTGGACAGAGCTCCAGCGCCCAATACACCCAACACACCCTCACCAGACACTCAAAAACCCCACCGGAAAGTTCATCGGAAGTCACCGGAGGTCATGGAAGATGGGAGAGAAATTGTCTTGTTGAAGTCAGACGCCCAAGGTTCCCAACACATATAAACCAATCTAATTTTTTTCATTCATTCATATTTTTACATCAATGTCATACAGTTTAACATGTGCATGTAGTAGTGGAGTAAACTGTTGGTTTGGCATGCTGACCGACTATTAGTAAGACACGTGTTTGTGCAAGTTGCATGTGTTGAGGCCTGACAACATCTTGCACCTCTGCTATACCAGCATGGACAAGAACCCTTGTGCTTGGTTCTAACTGTTAATAACGAATAAGATATATTATAAGAATTGTTTTTGATCTGGTTAAGCTTTCAAAATGATGATTTGGCGAGCCAAACAATTTTTAAGCTAGAGTTGAGGCTCAACAACAGGTTGCACCTCTAGAGTAATGATTTGTAATTTACCTAAGCATGTCTTAATTTTTTGAAGTCCGACTTTCATTGTGATCTTTTTTATTCTGAATATCCACAATGATGCTTCTATCAACATTTTTTTACACGGATACATGTGAAGTGGGAGTATATGGTTTATAATTTACTATCTGTATGCCATTTCCTTTATTTTTCTATGATTCTTGTTTAGCTATATCAGTTATCAAATGCTTGAAATACCAGGAACTGTTTCAAATGGAGCATGGTGTCTGCTCAAATTGTCATTTGGACTGTCATAAGCTCGTAAAGCACATAAGACCATTATCCTTGGACATGCGGCGTGATTATATTGAGAAAGTAGCACCTAATTTGGCAAGCCGGAAAAAGTTGTAAGTCCTTCAAGCAATTAGATTAAAGATGATGGTTTGCATATGTGAGGTTGCCATGTTATGCTTTCCTTTTCTTGTCAATACGTAAGAGAATATGTTTGCATTTGGTAAATTGTGAATGTCTACAGTTTCAAATAATTTGGTAGATAAGTATTCAGTGAACATCGAATTGTGGTTTCTATTTTCTGAGTTCTGACATTAACTCTTCTCGTCTGGAAGGCTTGATAAGATTGTTAATAATCCAACTGAGGGCAACGCATGGCACGCCGACCACATTGTTCCTGTTTACCGAGGTGGAGGTATGGAACATTCTACCTGGAAATTCATGTATTAGATATGGTATATATGCTGCTATTTTAGGTTTCAAAATTATACAGCGTATGGACTATGGTCAAAATCATTTGGAAGATGGGCTATGGGCTACTTCCCTTCCAAGCCTTTTTTATTTTTTTTTTATAATGATAAAATACATCCAAAAGGAGAAAACAGCCTAGAGGCCAGGGTGGAGTCACTCCTCCCAAGTGCTATCTCAAAAGGGCTTGCCAATCGTTAATAATCATAAGCAGACTATAATCACAAAAGAACTTCTTGTGTAAAGTAATCCACCAGGAGACCATATTTTATACAAGATTACAAAAAAATCAAAACAAGTAAACTTATCTTCAAAAGCTCTCGCATTCCTTCCACAAAAGCCACAATGTTGCCCAAAAAGCATAGCCTATGGTCACTTTAGCTTTTCTTTTCAAATTCCAAGCATTTAGACTTTCCGTAAGCCAATCATCAACTCTTCTGGGAATACAAAATGATACCCAACAATCCAGCTATATAACTCAAAGCCTTCCCAGCAAAGTCACAATGGAGGAGAATGTGGTCTATATTCTCACCATCTTATAGGCATAATCTACACCCCGAAGGGTTGCTTTACAAATAAAGATCTCAATATCAGTAGTCATGTGAGCAGAACATTATGGATAATTATACTCTTGAGGGTCCAAATGCAACAATATCCTAACCTCAGCTCTCTGATCCAAGATAACCCCATGGATATTTGCAGTTCACAACGAAGAGCAGATACCTATATCTCCATATTGTAGTGGCATTTCTAGAATTGAAATAAATGCGTGTAGACAGACTAAAGGGAGAAACAAGAGGTTTCAATAGTGTTTTGTACTCCAGTGAGACTGAAGAAGTGAGGGAAAAGAGAATGAGAGGATGTATGTCAATCAAATTACTGAGGTTTAATTACAAGTTTAGTCCTTGAACTTTAAACAGTGTCAAATAGTCGAACTTTCAATTGTGTCTAATAGGTCCTTTAATTTTAAAAAGTATCTAGTAGGTCCCTAAACTTTCACTTTTGTGTCTAATAGGTGCTTAAACTCACTTTTGTGTCCAATAAGTCCCTCAACTTTCAATTTTGTGTCTAATAGGTTCTTGACCTATTCAACATTTTTTAAAATTCACAGACTTACTAGACACAAAATTAAGAGTTTAGAGTCTGATTAGGCATAAACTTCAATTTTATATCTAATAGATTGTTTAATTTTTAAAAATCTCAAATATGTCAATGACATATTAGACATTTTTAAAGTTACACAAAATCAAAAGTTCGGAGACCTATTAGATAATCTTGAAAGTTCAGGGACCAAATAAACAAAGATTTAAAAGTTTAGGGACTAAACTTATAATTTAACCCTACTTGAATGAAAAATATCACCTTGAAGAGGTCATTCCATAGAAGAATACAGTGGGGTATACTTCAAGAGAGGAATTTTTGAGGACGGGAATTCAACCCATAGGTTATAATTCTTCATCACTAATACTACCTCTCTTTCTCACAAACATGGTTTATGGGCGGGCATCATCGGACTGCAGACTATCTAGATCATCTACAATGTTTCAAGACCATGAATAATTTCAGGACGCTATAGTTTTACAGTAACCAAACCATTTGAATCAATAAATAGTTCGCAATATTCTCAGCTTTCTATTTGGTCGTTTTACTAGGCATATGGATTTGTGGTGATTGATTAGTATGAATTATGTTCACCACTGAAGGTGAGTGCAGGCTAGAGAATATGAGGACCCTTTGTGTGGCATGTCATTTTGATGTTACTGCAAAACAACGTGCTGAACGACGATTAGTTCGGCTCAAAGCTAAGAAACAACTTAGAGACACTATCACTGATCTCAAGAAAGGTGGAAACACTGAGATCGATAACAACATTCAGGTTTGTGCTCTTTGTTTCAGTTCTACGTAGTTTAGTTCAAACAAATTTACCTTATTAAATTGAAGGGATACAATCTTGTAAAATAGCTGATAGTATGTAAATAAATTACAGAATCAAGTACATGATACGCAAGAGAATGTAGTTGATGATCAGCTAATCATAGTGAAGGTTCCTGGAAGTGCTTACTCCAAAGACGACTGCTTAGACAATAATACAGAGGGCCCTGGAGAGTCCACAGGAGCTTAGAGGACAAGATCCTGTGGTCCACATACTTAAAGCAGAAAATAATTCTCTTGACTCCACATTGTTGTATATTTGTCTTCGATGGCTGTTCTCATCACTCCACATTATTGTATATTTGTCTTCCATGGCTGGGTTTTGCATGTATTTTGCAGTCAGAATGGCTGCCCAATCCCAGCTGCAACACTTGCGCCAAACAAGTCGCGGCTACATGCACTCCGTTGCACTTGACTGGCAGGAAAATCTGTGCTGTATGTTGTAACCACATGCACAATCCAATTTGTTGCTAAAGCCCAACCTTACCCATTGTTTGAACTTGCAAGTTAATTTTGCTTGCTTGTTCCAATTGTAGTTTTGTAATGAATGTTTTGTAACTTCAATCTATTTAATGTAATTGGTTGATGGGTTCGAATGCTGGGCAGTTCCAGTAATTAGTTCCAACACCTTTCAAAAAGTGAAACGGAGACCGAAGAATCTAAATTCTTGACAGAAATATTTAATCTGTTTACTTGGAATGAAAAATCAAATTTCACGAAGGATGAATGGGTTGTTAACTTCTATTCTTGCGCCAGTGATTAGAAAAGAAACCTGGCTGGTTGAGAACTGTTACCAGAATCATTAATTATTCATATATACAAATACTAATTCTGATATAAAGTCTGGTTGTCCTGGTAGATTAAATGAAGGAATACAGACCTTTTTGTCCCTTTCATGCTGTGTAGTAGAGCTGAAAAACTTGTTTCATTGTGTTCATAATGACTAACTCTTGAATTTGTTGGTATATTTAACTCTCTTGAAAGTTCTTGTAACCAGTTAGCTGTTCCTTGATTTCAGAGACATCATGACAAAACTCAGCTGAAACACATGTGAAATCAAATATGGGATTAGACATCAATGGAACAAGAGATTTGGCTGAATAACCATTCTCTTTGGTTTTTAAAAAATCATTCTGTTTACAT

mRNA sequence

ATGATAACTTCTATTTCCATGAACCTCCTTCTAGGAAAAACCCTACCCTCCCCACTGGACAGAGCTCCAGCGCCCAATACACCCAACACACCCTCACCAGACACTCAAAAACCCCACCGGAAAGTTCATCGGAAGTCACCGGAGGTCATGGAAGATGGGAGAGAAATTGTCTTGTTGAAGTCAGACGCCCAAGCTATATCAGTTATCAAATGCTTGAAATACCAGGAACTGTTTCAAATGGAGCATGGTGTCTGCTCAAATTGTCATTTGGACTGTCATAAGCTCGTAAAGCACATAAGACCATTATCCTTGGACATGCGGCGTGATTATATTGAGAAAGTAGCACCTAATTTGGCAAGCCGGAAAAAGTTGCTTGATAAGATTGTTAATAATCCAACTGAGGGCAACGCATGGCACGCCGACCACATTGTTCCTGTTTACCGAGGTGGAGGTGAGTGCAGGCTAGAGAATATGAGGACCCTTTGTGTGGCATGTCATTTTGATGTTACTGCAAAACAACGTGCTGAACGACGATTAGTTCGGCTCAAAGCTAAGAAACAACTTAGAGACACTATCACTGATCTCAAGAAAGGTGGAAACACTGAGATCGATAACAACATTCAGAATCAAGTACATGATACGCAAGAGAATGTAGTTGATGATCAGCTAATCATAGTGAAGGTTCCTGGAAGTGCTTACTCCAAAGACGACTGCTTAGACAATAATACAGAGGGCCCTGGAGAGTCCACAGGAGCTTAG

Coding sequence (CDS)

ATGATAACTTCTATTTCCATGAACCTCCTTCTAGGAAAAACCCTACCCTCCCCACTGGACAGAGCTCCAGCGCCCAATACACCCAACACACCCTCACCAGACACTCAAAAACCCCACCGGAAAGTTCATCGGAAGTCACCGGAGGTCATGGAAGATGGGAGAGAAATTGTCTTGTTGAAGTCAGACGCCCAAGCTATATCAGTTATCAAATGCTTGAAATACCAGGAACTGTTTCAAATGGAGCATGGTGTCTGCTCAAATTGTCATTTGGACTGTCATAAGCTCGTAAAGCACATAAGACCATTATCCTTGGACATGCGGCGTGATTATATTGAGAAAGTAGCACCTAATTTGGCAAGCCGGAAAAAGTTGCTTGATAAGATTGTTAATAATCCAACTGAGGGCAACGCATGGCACGCCGACCACATTGTTCCTGTTTACCGAGGTGGAGGTGAGTGCAGGCTAGAGAATATGAGGACCCTTTGTGTGGCATGTCATTTTGATGTTACTGCAAAACAACGTGCTGAACGACGATTAGTTCGGCTCAAAGCTAAGAAACAACTTAGAGACACTATCACTGATCTCAAGAAAGGTGGAAACACTGAGATCGATAACAACATTCAGAATCAAGTACATGATACGCAAGAGAATGTAGTTGATGATCAGCTAATCATAGTGAAGGTTCCTGGAAGTGCTTACTCCAAAGACGACTGCTTAGACAATAATACAGAGGGCCCTGGAGAGTCCACAGGAGCTTAG

Protein sequence

MITSISMNLLLGKTLPSPLDRAPAPNTPNTPSPDTQKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKLVKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRLENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTEIDNNIQNQVHDTQENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGESTGA

Homology

[Close]

BLAST of Spg022719 vs. NCBI nr
Match: XP_022134708.1 (DNA annealing helicase and endonuclease ZRANB3 [Momordica charantia])

HSP 1 Score: 332.0 bits (850), Expect = 4.4e-87
Identity = 170/218 (77.98%), Postives = 187/218 (85.78%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE +ED     L   +   + +      +ELFQMEHGVCSNCHLDCHKL
Sbjct: 1014 QTPCQGINAKTPEFLED-LFCNLGCYEEYRVRISSTSLRRELFQMEHGVCSNCHLDCHKL 1073

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHI+PLSLDMRRDYIEKVAPNLASRKKLL+KIVNNPTEGNAW+ADHIVPVYRGGGECRL
Sbjct: 1074 VKHIKPLSLDMRRDYIEKVAPNLASRKKLLEKIVNNPTEGNAWNADHIVPVYRGGGECRL 1133

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCVACH DVTA+QRAERRLVRLKAKKQLRDTIT LKKGGNTE  DNNIQNQVHD 
Sbjct: 1134 ENMRTLCVACHSDVTAEQRAERRLVRLKAKKQLRDTITHLKKGGNTERTDNNIQNQVHDV 1193

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGESTGA 253
            QENVVDDQLI+VKVPGS+YSKDD LDN+T+ PGES GA
Sbjct: 1194 QENVVDDQLILVKVPGSSYSKDDFLDNDTKNPGESRGA 1230

[Close]

BLAST of Spg022719 vs. NCBI nr
Match: KAG6589530.1 (DNA annealing helicase and endonuclease ZRANB3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.9 bits (847), Expect = 9.8e-87
Identity = 167/216 (77.31%), Postives = 185/216 (85.65%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE  ED     L   +   + +      +ELFQMEHGVCSNCHLDCHKL
Sbjct: 1014 QTPCQGINAKTPEYFED-LFCNLGCYEEYRVRISSTSLRRELFQMEHGVCSNCHLDCHKL 1073

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHIRPLS+DMRRDYIEKVAP LASRK LL+K+VNNPTEGNAWHADHIVPVYRGGGECRL
Sbjct: 1074 VKHIRPLSVDMRRDYIEKVAPKLASRKNLLEKLVNNPTEGNAWHADHIVPVYRGGGECRL 1133

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCVACHFDVTA+QRAERRLVRLKAKKQLRDTITD+KK  NTE IDN+IQN+VHD 
Sbjct: 1134 ENMRTLCVACHFDVTAEQRAERRLVRLKAKKQLRDTITDIKKSENTERIDNDIQNRVHDA 1193

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGEST 251
            QENV+D+QLI+VKVPGSAYSKDDCLDNNTEGP EST
Sbjct: 1194 QENVLDEQLILVKVPGSAYSKDDCLDNNTEGPEEST 1228

[Close]

BLAST of Spg022719 vs. NCBI nr
Match: XP_023516624.1 (DNA annealing helicase and endonuclease ZRANB3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 1.7e-86
Identity = 167/218 (76.61%), Postives = 185/218 (84.86%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE  ED     L   +   + +      +ELFQMEHGVCSNCHLDCHKL
Sbjct: 1014 QTPCQGINAKTPEYFED-LFCNLGCYEEYRVRISSTSLRRELFQMEHGVCSNCHLDCHKL 1073

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHIRPLS++MRRDYIEKVAP LASRK LL+KIVNNPTEGNAWHADHIVPVYRGGGECRL
Sbjct: 1074 VKHIRPLSVEMRRDYIEKVAPKLASRKNLLEKIVNNPTEGNAWHADHIVPVYRGGGECRL 1133

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCV CHFDVTA+QRAERRLVRLKAKKQLRDTITD+KK  NTE IDN+IQN+VHD 
Sbjct: 1134 ENMRTLCVGCHFDVTAEQRAERRLVRLKAKKQLRDTITDIKKSENTERIDNDIQNRVHDA 1193

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGESTGA 253
            QENV+D+QLI+VKVPGSAYSKDDCLDNNTEGP EST A
Sbjct: 1194 QENVLDEQLILVKVPGSAYSKDDCLDNNTEGPEESTAA 1230

[Close]

BLAST of Spg022719 vs. NCBI nr
Match: KAG7023215.1 (DNA annealing helicase and endonuclease ZRANB3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-86
Identity = 166/216 (76.85%), Postives = 185/216 (85.65%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE  ED     L   +   + +      +ELFQMEHGVCSNCHLDCHKL
Sbjct: 1016 QTPCQGINAKTPEYFED-LFCNLGCYEEYRVRISSTSLRRELFQMEHGVCSNCHLDCHKL 1075

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHIRPLS++MRRDYIEKVAP LASRK LL+K+VNNPTEGNAWHADHIVPVYRGGGECRL
Sbjct: 1076 VKHIRPLSVEMRRDYIEKVAPKLASRKNLLEKLVNNPTEGNAWHADHIVPVYRGGGECRL 1135

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCVACHFDVTA+QRAERRLVRLKAKKQLRDTITD+KK  NTE IDN+IQN+VHD 
Sbjct: 1136 ENMRTLCVACHFDVTAEQRAERRLVRLKAKKQLRDTITDIKKSENTERIDNDIQNRVHDA 1195

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGEST 251
            QENV+D+QLI+VKVPGSAYSKDDCLDNNTEGP EST
Sbjct: 1196 QENVLDEQLILVKVPGSAYSKDDCLDNNTEGPEEST 1230

[Close]

BLAST of Spg022719 vs. NCBI nr
Match: XP_038880755.1 (DNA annealing helicase and endonuclease ZRANB3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 328.9 bits (842), Expect = 3.7e-86
Identity = 170/219 (77.63%), Postives = 185/219 (84.47%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE  ED     L   +   I +      +ELFQ+E GVCSNCHLDCHKL
Sbjct: 1002 QTPCQGINAKTPEYFED-LFCNLGCYEEYRIRISTTSLRRELFQIERGVCSNCHLDCHKL 1061

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHIRPL+LDMR DYIEKVAPNLA RKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL
Sbjct: 1062 VKHIRPLTLDMRSDYIEKVAPNLARRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 1121

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCVACHFDVTA+QRAERRLVRLKAKKQLRDTITD+KKGGNTE ID NIQ ++HD 
Sbjct: 1122 ENMRTLCVACHFDVTAEQRAERRLVRLKAKKQLRDTITDIKKGGNTERIDTNIQKRLHDE 1181

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLD-NNTEGPGESTGA 253
            QENV+DDQLI+VKVPGSAYSKDDCLD NNTEGP ES GA
Sbjct: 1182 QENVIDDQLILVKVPGSAYSKDDCLDNNNTEGPRESIGA 1219

[Close]

BLAST of Spg022719 vs. ExPASy Swiss-Prot
Match: Q6NZP1 (DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus OX=10090 GN=Zranb3 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.2e-17
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 76   ELFQMEHGVCSNCHLDCHKLVKHIRPLSLDMRRDYIEKVAPNLASRKKL----LDKIVNN 135
            ++F  EHGVC +C +D  +L   +R      R+  +     N A   KL    L++++ N
Sbjct: 946  QVFATEHGVCQHCGVDAQELFLRMRDAPKSHRKSLL-----NAAWTAKLPLEQLNEMLRN 1005

Query: 136  PTEGNAWHADHIVPVYRGGGECRLENMRTLCVACHFDVTAKQRAERRLVR 182
            P EG+ W  DHI PVY GGG+C L+N++TLC  CH + TA+Q  ER  VR
Sbjct: 1006 PGEGHFWQVDHIRPVYEGGGQCSLDNLQTLCTVCHKERTAQQAKERSQVR 1050

[Close]

BLAST of Spg022719 vs. ExPASy Swiss-Prot
Match: Q5FWF4 (DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens OX=9606 GN=ZRANB3 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 3.8e-17
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 76   ELFQMEHGVCSNCHLDCHKLVKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEG 135
            ++F+ EHGVC  C+++  +L   +R      R++ +     +    ++ L++++ NP EG
Sbjct: 956  KVFETEHGVCQLCNVNAQELFLRLRDAPKSQRKNLLYATWTSKLPLEQ-LNEMIRNPGEG 1015

Query: 136  NAWHADHIVPVYRGGGECRLENMRTLCVACHFDVTAKQRAERRLVR 182
            + W  DHI PVY GGG+C L+N++TLC  CH + TA+Q  ER  VR
Sbjct: 1016 HFWQVDHIKPVYGGGGQCSLDNLQTLCTVCHKERTARQAKERSQVR 1060

[Close]

BLAST of Spg022719 vs. ExPASy Swiss-Prot
Match: E1BB03 (DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus OX=9913 GN=ZRANB3 PE=3 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 76   ELFQMEHGVCSNCHLDCHKLVKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEG 135
            ++F++EHGVC  C+L+  +L   +R      R+  ++    +    ++ L++++ +P EG
Sbjct: 951  KVFEIEHGVCQLCNLNAQELFLRLRDAPKSQRKSLLDATWTSKLPLEQ-LNEMIRSPGEG 1010

Query: 136  NAWHADHIVPVYRGGGECRLENMRTLCVACHFDVTAKQRAERRLVR 182
            + W  DHI PV  GGG+C L+N++TLC  CH + TA+Q  ER  VR
Sbjct: 1011 HFWQVDHIKPVSGGGGQCSLDNLQTLCTVCHRERTAQQAKERSQVR 1055

[Close]

BLAST of Spg022719 vs. ExPASy TrEMBL
Match: A0A6J1C2S2 (DNA annealing helicase and endonuclease ZRANB3 OS=Momordica charantia OX=3673 GN=LOC111006916 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.1e-87
Identity = 170/218 (77.98%), Postives = 187/218 (85.78%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE +ED     L   +   + +      +ELFQMEHGVCSNCHLDCHKL
Sbjct: 1014 QTPCQGINAKTPEFLED-LFCNLGCYEEYRVRISSTSLRRELFQMEHGVCSNCHLDCHKL 1073

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHI+PLSLDMRRDYIEKVAPNLASRKKLL+KIVNNPTEGNAW+ADHIVPVYRGGGECRL
Sbjct: 1074 VKHIKPLSLDMRRDYIEKVAPNLASRKKLLEKIVNNPTEGNAWNADHIVPVYRGGGECRL 1133

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCVACH DVTA+QRAERRLVRLKAKKQLRDTIT LKKGGNTE  DNNIQNQVHD 
Sbjct: 1134 ENMRTLCVACHSDVTAEQRAERRLVRLKAKKQLRDTITHLKKGGNTERTDNNIQNQVHDV 1193

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGESTGA 253
            QENVVDDQLI+VKVPGS+YSKDD LDN+T+ PGES GA
Sbjct: 1194 QENVVDDQLILVKVPGSSYSKDDFLDNDTKNPGESRGA 1230

[Close]

BLAST of Spg022719 vs. ExPASy TrEMBL
Match: A0A6J1JEM2 (DNA annealing helicase and endonuclease ZRANB3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485093 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.0e-86
Identity = 166/218 (76.15%), Postives = 185/218 (84.86%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE  ED     L   +   + +      +ELFQMEHGVCS CHLDCHKL
Sbjct: 1014 QTPCQGINAKTPEYFED-LFCNLGCYEEYRVRISSTSLRRELFQMEHGVCSTCHLDCHKL 1073

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHIRPLS++MRRDYIEKVAP LASRK LL+KIVNNPTEGNAWHADHIVPVYRGGGECRL
Sbjct: 1074 VKHIRPLSVEMRRDYIEKVAPTLASRKNLLEKIVNNPTEGNAWHADHIVPVYRGGGECRL 1133

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCVACHFDVTA+QRAERRLVRLKAKK+LRDTITD+KK  NTE IDN+IQN+VHD 
Sbjct: 1134 ENMRTLCVACHFDVTAEQRAERRLVRLKAKKRLRDTITDIKKSENTERIDNDIQNRVHDA 1193

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGESTGA 253
            QENV+D+QLI+VKVPGSAYSKDDCLDNNTEGP EST A
Sbjct: 1194 QENVLDEQLILVKVPGSAYSKDDCLDNNTEGPEESTAA 1230

[Close]

BLAST of Spg022719 vs. ExPASy TrEMBL
Match: A0A6J1JAQ4 (DNA annealing helicase and endonuclease ZRANB3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485093 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.0e-86
Identity = 166/218 (76.15%), Postives = 185/218 (84.86%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE  ED     L   +   + +      +ELFQMEHGVCS CHLDCHKL
Sbjct: 985  QTPCQGINAKTPEYFED-LFCNLGCYEEYRVRISSTSLRRELFQMEHGVCSTCHLDCHKL 1044

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHIRPLS++MRRDYIEKVAP LASRK LL+KIVNNPTEGNAWHADHIVPVYRGGGECRL
Sbjct: 1045 VKHIRPLSVEMRRDYIEKVAPTLASRKNLLEKIVNNPTEGNAWHADHIVPVYRGGGECRL 1104

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCVACHFDVTA+QRAERRLVRLKAKK+LRDTITD+KK  NTE IDN+IQN+VHD 
Sbjct: 1105 ENMRTLCVACHFDVTAEQRAERRLVRLKAKKRLRDTITDIKKSENTERIDNDIQNRVHDA 1164

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGESTGA 253
            QENV+D+QLI+VKVPGSAYSKDDCLDNNTEGP EST A
Sbjct: 1165 QENVLDEQLILVKVPGSAYSKDDCLDNNTEGPEESTAA 1201

[Close]

BLAST of Spg022719 vs. ExPASy TrEMBL
Match: A0A0A0LPG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G011550 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.8e-85
Identity = 166/221 (75.11%), Postives = 186/221 (84.16%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE +ED     L   +   + +      +ELFQMEHGVCSNC LDCHKL
Sbjct: 1002 QTPCQGINAKAPEYLED-LFCNLGCYEEYRVRISTTSLRRELFQMEHGVCSNCRLDCHKL 1061

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHI+PL+LDMRRDYIEKVAPNLASRKKLL+KIVNNPTEGNAWHADHIVPVYRGGGECRL
Sbjct: 1062 VKHIQPLTLDMRRDYIEKVAPNLASRKKLLEKIVNNPTEGNAWHADHIVPVYRGGGECRL 1121

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNT-EIDNNIQNQVHDT 215
            ENMRTLCVACHFDVTA+QRAERRLVRLKAKKQL+D I D+KKGGNT  ID +IQ QVHD 
Sbjct: 1122 ENMRTLCVACHFDVTAEQRAERRLVRLKAKKQLKDAIIDIKKGGNTGRIDTDIQKQVHDE 1181

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCL---DNNTEGPGESTGA 253
            QE+V+DDQLI+VKVPGSAYSKDDCL   +NN EGPGESTGA
Sbjct: 1182 QESVIDDQLILVKVPGSAYSKDDCLVNNNNNIEGPGESTGA 1221

[Close]

BLAST of Spg022719 vs. ExPASy TrEMBL
Match: A0A6J1E1Z4 (DNA annealing helicase and endonuclease ZRANB3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430052 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 7.6e-85
Identity = 164/218 (75.23%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            Q P + ++ K+PE  ED     L   +   + +      +ELFQMEHGVCSNCHLDCHKL
Sbjct: 1014 QTPCQGINAKTPEYFED-LFCNLGCYEEYRVRISSTSLRRELFQMEHGVCSNCHLDCHKL 1073

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VKHIRPLS++MRRDYIEKVAP L SRK LL+ IVNNPTEGNAWHADHIVPVYRGGGECRL
Sbjct: 1074 VKHIRPLSVEMRRDYIEKVAPKLTSRKNLLETIVNNPTEGNAWHADHIVPVYRGGGECRL 1133

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLKKGGNTE-IDNNIQNQVHDT 215
            ENMRTLCVACHFDVTA+QRAERRLVRLKAKKQLRDTITD+KK  NTE IDN+IQN+VH+ 
Sbjct: 1134 ENMRTLCVACHFDVTAEQRAERRLVRLKAKKQLRDTITDIKKSENTERIDNDIQNRVHNA 1193

Query: 216  QENVVDDQLIIVKVPGSAYSKDDCLDNNTEGPGESTGA 253
            QENV+D+QLI+VKVPGSAYSKDDCLDNNT GP EST A
Sbjct: 1194 QENVLDEQLILVKVPGSAYSKDDCLDNNTAGPEESTAA 1230

[Close]

BLAST of Spg022719 vs. TAIR 10
Match: AT5G07810.1 (SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein )

HSP 1 Score: 201.4 bits (511), Expect = 8.3e-52
Identity = 107/210 (50.95%), Postives = 146/210 (69.52%), Query Frame = 0


Query: 36   QKPHRKVHRKSPEVMEDGREIVLLKSDAQAISVIKCLKYQELFQMEHGVCSNCHLDCHKL 95
            QKP    + K PE +ED    +    D +  +  + ++     Q+EHG+C+NC LDCH+L
Sbjct: 987  QKPCAGYNAKEPEYLEDLFCELACYEDYRTRTSSRYIR-----QIEHGICTNCKLDCHQL 1046

Query: 96   VKHIRPLSLDMRRDYIEKVAPNLASRKKLLDKIVNNPTEGNAWHADHIVPVYRGGGECRL 155
            VK +RPL L+ RR YI K AP L +RK LL+ +VN+PTEGNAWHADHI+PVY+GGGECRL
Sbjct: 1047 VKRLRPLPLEKRRTYINKAAPELFARKNLLETLVNDPTEGNAWHADHIIPVYQGGGECRL 1106

Query: 156  ENMRTLCVACHFDVTAKQRAERRLVRLKAKKQLRDTITDLK---KGGNTEIDNNIQNQVH 215
            ENMRTLCVACH DVTA Q AER+L+R KA+KQL++T+ +L+   K  +   D N +    
Sbjct: 1107 ENMRTLCVACHADVTAAQCAERKLIRSKARKQLKNTLNELRNNPKQKDLSADENTKET-- 1166

Query: 216  DTQENVVDDQLIIVKVPGSAYSKDDCLDNN 243
            D+  N  +D+L+I +VPGSAYS D  ++++
Sbjct: 1167 DSATNEEEDELMI-EVPGSAYSIDQKINHD 1188

The following BLAST results are available for this feature:

BLAST of Spg022719 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134708.1	4.4e-87	77.98	DNA annealing helicase and endonuclease ZRANB3 [Momordica charantia]	[more]
KAG6589530.1	9.8e-87	77.31	DNA annealing helicase and endonuclease ZRANB3, partial [Cucurbita argyrosperma ...	[more]
XP_023516624.1	1.7e-86	76.61	DNA annealing helicase and endonuclease ZRANB3 [Cucurbita pepo subsp. pepo]	[more]
KAG7023215.1	2.8e-86	76.85	DNA annealing helicase and endonuclease ZRANB3, partial [Cucurbita argyrosperma ...	[more]
XP_038880755.1	3.7e-86	77.63	DNA annealing helicase and endonuclease ZRANB3-like isoform X1 [Benincasa hispid...	[more]

BLAST of Spg022719 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NZP1	2.2e-17	40.91	DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus OX=10090 GN=Zranb...	[more]
Q5FWF4	3.8e-17	37.74	DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens OX=9606 GN=ZRANB3...	[more]
E1BB03	2.5e-16	36.79	DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus OX=9913 GN=ZRANB3 P...	[more]

BLAST of Spg022719 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2S2	2.1e-87	77.98	DNA annealing helicase and endonuclease ZRANB3 OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1JEM2	4.0e-86	76.15	DNA annealing helicase and endonuclease ZRANB3 isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1JAQ4	4.0e-86	76.15	DNA annealing helicase and endonuclease ZRANB3 isoform X2 OS=Cucurbita maxima OX...	[more]
A0A0A0LPG8	5.8e-85	75.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G011550 PE=4 SV=1	[more]
A0A6J1E1Z4	7.6e-85	75.23	DNA annealing helicase and endonuclease ZRANB3 isoform X1 OS=Cucurbita moschata ...	[more]

BLAST of Spg022719 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07810.1	8.3e-52	50.95	SNF2 domain-containing protein / helicase domain-containing protein / HNH endonu...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002711	HNH endonuclease	PFAM	PF01844	HNH	coord: 135..167 e-value: 1.1E-6 score: 28.6
None	No IPR available	GENE3D	1.10.30.50		coord: 60..193 e-value: 2.9E-7 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..49
None	No IPR available	PANTHER	PTHR45766:SF5	DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3	coord: 75..191
None	No IPR available	PANTHER	PTHR45766	DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER	coord: 75..191
IPR003615	HNH nuclease	CDD	cd00085	HNHc	coord: 130..170 e-value: 2.17752E-4 score: 36.2956

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022719.1	Spg022719.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0031297	replication fork processing
biological_process	GO:0048478	replication fork protection
cellular_component	GO:0043596	nuclear replication fork
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004520	endodeoxyribonuclease activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004519	endonuclease activity