Homology
BLAST of Spg022669 vs. NCBI nr
Match:
XP_038878920.1 (RNA-dependent RNA polymerase 2 [Benincasa hispida])
HSP 1 Score: 2096.6 bits (5431), Expect = 0.0e+00
Identity = 1032/1130 (91.33%), Postives = 1079/1130 (95.49%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPER TL+VSN+PESAIAQDL TFL SKLG DS+FAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MAQPERSTLKVSNVPESAIAQDLWTFLSSKLGPDSIFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
LE KSKAQSLSVQN LVFNSHNLRFSE NDDIVVRPVHARNR ENG+LHVGFMLKEDRM
Sbjct: 61 LETKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRAENGVLHVGFMLKEDRMC 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESWDGVKAW+MPERRRVEFW+WH+++CYKLEVMFEEILETTG+CLG EKLNALLLK
Sbjct: 121 VLESWDGVKAWIMPERRRVEFWIWHEKECYKLEVMFEEILETTGFCLGHEKLNALLLK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKY PRIYKKISGSNMASRFS RYRLC+EDYDYLWVRTTEFSAMRS+G
Sbjct: 181 -----------LKYAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSAMRSVG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWE+EEDL AS+IF SFPFY E+ K+ +LEDGEEFG++SEIVPLIK GLGSNL Y
Sbjct: 241 QSTSFCWEVEEDLLASNIFLSFPFYRETQKDIVLEDGEEFGTSSEIVPLIKFGLGSNLVY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EV+YQLNSLVHMQKISLAAAN+DLI+FLSTL +DTALN+LQRLHQLKFIC+ PLSFLKTQ
Sbjct: 301 EVQYQLNSLVHMQKISLAAANDDLINFLSTLDVDTALNVLQRLHQLKFICYDPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHVLKRNCKN SQKRL+NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDF
Sbjct: 361 LHVLKRNCKNLSLSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSIQRGI SKPYRTEIYHRIM ILRDGIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMNILRDGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFASS++LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD
Sbjct: 481 ASQLRSNSVWMFASSNNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCG+N+IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGV+DESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVQDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LLGRMLTDKV ALNVLENL+GADS+NILV+MLNHGYEPNIEPYLSMM+QAHYWNLFS
Sbjct: 661 QLHLLGRMLTDKVVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMIQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+ELQDRNQ +FH IDETKSIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LG+VVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL
Sbjct: 781 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPP+TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPRTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKALSSKCLELA LHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYIS+N
Sbjct: 901 ADREPKKALSSKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISNN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVKSIE+ERSRLVWSEE ARA YDHDLEVDGFEAFL++AESYKD+YIEKMSI
Sbjct: 961 VLGKLYRAAVKSIEQERSRLVWSEEAARAVYDHDLEVDGFEAFLEMAESYKDLYIEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLS+K LRKE KEWFENSCAP
Sbjct: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSMKNLRKEVKEWFENSCAP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQA 1131
HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSK+HQA
Sbjct: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHQA 1117
BLAST of Spg022669 vs. NCBI nr
Match:
XP_022134828.1 (RNA-dependent RNA polymerase 2 [Momordica charantia])
HSP 1 Score: 2085.1 bits (5401), Expect = 0.0e+00
Identity = 1031/1135 (90.84%), Postives = 1084/1135 (95.51%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPERPTL+VSNIPESAIAQDLLTFL SKLG DS+FAIEIFTERKNWKSRGSGRVQF T
Sbjct: 1 MAQPERPTLKVSNIPESAIAQDLLTFLNSKLGPDSIFAIEIFTERKNWKSRGSGRVQFAT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
L AKS AQSLSVQ+ LVFNSHNLRFSETNDDIVVRPV A +RT NG LHVGFMLKE+RMS
Sbjct: 61 LAAKSIAQSLSVQHDLVFNSHNLRFSETNDDIVVRPVLATHRTHNGGLHVGFMLKENRMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESWDGVKAWVMPERRRV+FW+ H+ + YKLE+MFEEILE+TG GGEKLNALL+K
Sbjct: 121 VLESWDGVKAWVMPERRRVDFWICHQGETYKLELMFEEILESTGLSFGGEKLNALLIK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKYVPRIYKKISGSNMA++FS RYRLCKEDYDYLWVRTTEFSAMRSIG
Sbjct: 181 -----------LKYVPRIYKKISGSNMATKFSSTRYRLCKEDYDYLWVRTTEFSAMRSIG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWEIEEDLQASD+FSSFPFY E+LK+F+LE+GEEFGSTSEIVPLIKSGLGSNLAY
Sbjct: 241 QSTSFCWEIEEDLQASDVFSSFPFYKENLKDFVLEEGEEFGSTSEIVPLIKSGLGSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EV+YQLNSLVHMQKISLAAANNDL+DFLSTL ++TALNILQ+LHQLKFIC++PLSFLKTQ
Sbjct: 301 EVQYQLNSLVHMQKISLAAANNDLVDFLSTLSVETALNILQKLHQLKFICYEPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHVLKRNCKN PS SQKRL+NN+MNCYR LVTPSRIYCLGPELETSNYVVKNFAS+ASDF
Sbjct: 361 LHVLKRNCKNLPSSSQKRLSNNLMNCYRALVTPSRIYCLGPELETSNYVVKNFASYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSI+RGIFSKPYRTEIYHR+MTILRDGIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIERGIFSKPYRTEIYHRVMTILRDGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFAS+D+LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSS QTLVVP+QD
Sbjct: 481 ASQLRSNSVWMFASNDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSMQTLVVPSQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCG+N+IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LLGRMLT+KVAAL+VLENLNG SDNILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLGRMLTNKVAALDVLENLNGVKSDNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+ELQDRNQN+FH IDET SIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQDRNQNYFHKIDETTSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLV+CL+FPQKGERPHTNECSGGDLDGDL
Sbjct: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVNCLVFPQKGERPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKA+SSKCLELA LHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN
Sbjct: 901 ADREPKKAISSKCLELATLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVKSIERERSRLVWSEETARA YD DLEVDGFE FL++AES+KDMY EKMSI
Sbjct: 961 VLGKLYRAAVKSIERERSRLVWSEETARAIYDCDLEVDGFETFLEMAESFKDMYTEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDE+LMGDLR+RASYLQRDNRKYGDMKDRIL+SVKTLRKE +EWFENSCAP
Sbjct: 1021 LMNYYGAEYEDELLMGDLRNRASYLQRDNRKYGDMKDRILISVKTLRKEVREWFENSCAP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQA-EKNC 1135
HEHK MASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSK+HQA E+NC
Sbjct: 1081 HEHKPMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHQAEERNC 1122
BLAST of Spg022669 vs. NCBI nr
Match:
XP_023516327.1 (RNA-dependent RNA polymerase 2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2084.7 bits (5400), Expect = 0.0e+00
Identity = 1027/1133 (90.64%), Postives = 1084/1133 (95.68%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
M QP+R TLRVSN+PESA+A+DLLTFLKSKLG DSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MGQPKRSTLRVSNVPESAVAEDLLTFLKSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
LEAKSKAQSLSVQN LVFN+HNLRFSETNDDI+VRP+HARNRTENG+LHVGFMLKED MS
Sbjct: 61 LEAKSKAQSLSVQNNLVFNTHNLRFSETNDDIIVRPIHARNRTENGVLHVGFMLKEDHMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESW+GVKAW+MPERRRVEFW+WH+++CYKLEVMFEEILETTGYCLG EKLNALLLK
Sbjct: 121 VLESWEGVKAWIMPERRRVEFWIWHEDECYKLEVMFEEILETTGYCLGDEKLNALLLK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKY PRIYK+ISGSNMAS+FS +RYRLCKE++DYLW+RTTEFS++RSIG
Sbjct: 181 -----------LKYAPRIYKRISGSNMASKFSSSRYRLCKEEHDYLWIRTTEFSSLRSIG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWE+EEDLQASDIFSSFP Y E+ K+ LEDG EFGSTSE VPLIKSGL SNLAY
Sbjct: 241 QSTSFCWEVEEDLQASDIFSSFPLYRETPKDITLEDGGEFGSTSEAVPLIKSGLVSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
E++YQLNSLVHMQKISLAAA+NDLI+FLSTLG DTALNILQRLHQLKFIC+ PLSFLKTQ
Sbjct: 301 ELQYQLNSLVHMQKISLAAASNDLIEFLSTLGTDTALNILQRLHQLKFICYDPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHVLKRNCK PSLSQKRL+NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDF
Sbjct: 361 LHVLKRNCKVLPSLSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSIQRG+ SKPYRTEIYHRI++ILR+GIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIQRGLLSKPYRTEIYHRIVSILRNGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFASSD+LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD
Sbjct: 481 ASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGL +IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLTHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTK SDSMPCYLNREIVTLLSTLGVKDESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKCSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LL RMLTDKVAALNVLENLNGADS+NILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLRRMLTDKVAALNVLENLNGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+EL+DRNQN+FH IDETKSIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELRDRNQNYFHKIDETKSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LG+VVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL
Sbjct: 781 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKALSSKCLELA LHSMAVD+AKTGAPAEMPRVLKPREFPDFMERFDKPMY S+N
Sbjct: 901 ADREPKKALSSKCLELAALHSMAVDYAKTGAPAEMPRVLKPREFPDFMERFDKPMYKSNN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVK++E+ERSRLVW+EETARA YDHDLEVDGFEAFL+ AES+K MYIEKMSI
Sbjct: 961 VLGKLYRAAVKTMEQERSRLVWTEETARAIYDHDLEVDGFEAFLETAESFKVMYIEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAE+EDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVK +RKEAKEWFENSCAP
Sbjct: 1021 LMNYYGAEFEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKCVRKEAKEWFENSCAP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQAEKN 1134
HEHKMMASAWYHVTYHPSYFK+DMFYFSFPW V DVLLNIKAMNSK+ +AEKN
Sbjct: 1081 HEHKMMASAWYHVTYHPSYFKQDMFYFSFPWIVHDVLLNIKAMNSKRREAEKN 1120
BLAST of Spg022669 vs. NCBI nr
Match:
KAG6589458.1 (RNA-dependent RNA polymerase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023142.1 RNA-dependent RNA polymerase 2 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2080.4 bits (5389), Expect = 0.0e+00
Identity = 1027/1133 (90.64%), Postives = 1081/1133 (95.41%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
M QPER TLRVSN+PESA+A+DLLTFLKSKLG DSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MGQPERSTLRVSNVPESAVAEDLLTFLKSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
LEAKSKAQSLSVQN LVF++HNLRFSETNDDI+VRP+HARNRTENG+LHVGFMLKED MS
Sbjct: 61 LEAKSKAQSLSVQNNLVFSTHNLRFSETNDDIIVRPIHARNRTENGVLHVGFMLKEDHMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESW+GVKAW+MPERRRVEFW+W +++CYKLEVMFEEILETTGYCLG EKLNALLLK
Sbjct: 121 VLESWEGVKAWIMPERRRVEFWIWREDECYKLEVMFEEILETTGYCLGDEKLNALLLK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKY PRIYKKISGSNMAS+FS +RYRLCKE++DYLW+RTTEFS++RSIG
Sbjct: 181 -----------LKYAPRIYKKISGSNMASKFSSSRYRLCKEEHDYLWIRTTEFSSLRSIG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWE+EEDLQASDIFSSFP Y E+ K+ LEDG EFGSTSE VPLIKSGL SNLAY
Sbjct: 241 QSTSFCWEVEEDLQASDIFSSFPLYRETPKDITLEDGGEFGSTSEAVPLIKSGLVSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EV+YQLNSLVHMQKISLAAA+NDLI+FLSTLG DTALNILQRLHQLKFIC+ PLSFLKTQ
Sbjct: 301 EVQYQLNSLVHMQKISLAAASNDLIEFLSTLGTDTALNILQRLHQLKFICYDPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHVLKRNCK PSLSQKRL+NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDF
Sbjct: 361 LHVLKRNCKVLPSLSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSIQRG+ SKPYRTEIYHRI++ILR+GIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIQRGLLSKPYRTEIYHRIVSILRNGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFASSD+LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD
Sbjct: 481 ASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGL +IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLTHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTK SDSMPCYLNREIVTLLSTLGVKDESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKCSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LL RML DKVAALNVLENLNGADS+NILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLRRMLMDKVAALNVLENLNGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+EL+DRNQN+FH IDETKSIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELRDRNQNYFHKIDETKSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LG+VVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL
Sbjct: 781 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKALSSKCLELA LHSMAVD+AKTGAPAEMPRVLKPREFPDFMERFDKPMY S+N
Sbjct: 901 ADREPKKALSSKCLELAALHSMAVDYAKTGAPAEMPRVLKPREFPDFMERFDKPMYKSNN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVK++E+ERSRLVW+EETA A YDHDLEVDGFEAFL+ AES+K MYIEKMSI
Sbjct: 961 VLGKLYRAAVKTMEQERSRLVWTEETATAIYDHDLEVDGFEAFLETAESFKVMYIEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVK +RKEAKEWFENSCAP
Sbjct: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKCVRKEAKEWFENSCAP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQAEKN 1134
HEHKMMASAWYHVTYHPSYFK+DMFYFSFPW V DVLLNIKAMNSK+ +AEKN
Sbjct: 1081 HEHKMMASAWYHVTYHPSYFKQDMFYFSFPWIVHDVLLNIKAMNSKRREAEKN 1120
BLAST of Spg022669 vs. NCBI nr
Match:
XP_022921679.1 (RNA-dependent RNA polymerase 2 [Cucurbita moschata])
HSP 1 Score: 2077.4 bits (5381), Expect = 0.0e+00
Identity = 1025/1133 (90.47%), Postives = 1080/1133 (95.32%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
M QPER TLRVSN+PESA+A+DLLTFLKSKLG DSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MGQPERSTLRVSNVPESAVAEDLLTFLKSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
LEAKSKAQSLSVQN LVF++HNLRFSETNDDI+VRP+H RNRTENG+LHVGFMLKED MS
Sbjct: 61 LEAKSKAQSLSVQNNLVFSTHNLRFSETNDDIIVRPIHGRNRTENGVLHVGFMLKEDHMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESW+GVKAW+MPERRRVEFW+W +++CYKLEVMFEEILETTGYCLG EKLNALLLK
Sbjct: 121 VLESWEGVKAWIMPERRRVEFWIWREDECYKLEVMFEEILETTGYCLGDEKLNALLLK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKY PRIYKKISGSNMA +FS +RYRLCKE++DYLW+RTTEFS++RSIG
Sbjct: 181 -----------LKYAPRIYKKISGSNMAYKFSSSRYRLCKEEHDYLWIRTTEFSSLRSIG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWE+EEDLQASD+FSSFP Y E+ K+ LEDG EFGSTSE VPLIKSGL SNLAY
Sbjct: 241 QSTSFCWEVEEDLQASDMFSSFPLYRETPKDITLEDGGEFGSTSEAVPLIKSGLVSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EV+YQLNSLVHMQKISLAAA+NDLIDFLSTLG DTALNILQRLHQLKFIC+ PLSFLKTQ
Sbjct: 301 EVQYQLNSLVHMQKISLAAASNDLIDFLSTLGTDTALNILQRLHQLKFICYDPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHVLKRNCK PSLSQKRL+NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDF
Sbjct: 361 LHVLKRNCKVLPSLSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSIQRG+ SKPYRTEIYHRI++ILR+GIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIQRGLLSKPYRTEIYHRIVSILRNGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFASS++LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD
Sbjct: 481 ASQLRSNSVWMFASSNNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGL +IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLTHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTK SDSMPCYLNREIVTLLSTLGVKDESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKCSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LL RMLTDKVAALNVLENLNGADS+NILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLRRMLTDKVAALNVLENLNGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+EL+DRNQN+FH IDETKSIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELRDRNQNYFHKIDETKSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LG+VVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL
Sbjct: 781 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKALSSKCLELA LHSMAVD+AKTGAPAEMPRVLKPREFPDFMERFDKPMY S+N
Sbjct: 901 ADREPKKALSSKCLELAALHSMAVDYAKTGAPAEMPRVLKPREFPDFMERFDKPMYKSNN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVK++E+ERSRLVW+EETA A YDHDLEVDGFEAFL+ AES+K MYIEKMSI
Sbjct: 961 VLGKLYRAAVKTMEQERSRLVWTEETATAIYDHDLEVDGFEAFLETAESFKVMYIEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVK +RKEAKEWFENSCAP
Sbjct: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKCVRKEAKEWFENSCAP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQAEKN 1134
HEHKMMASAWYHVTYHPSYFK+DMFYFSFPW V DVLLNIKAMNSK+ +AEKN
Sbjct: 1081 HEHKMMASAWYHVTYHPSYFKQDMFYFSFPWIVHDVLLNIKAMNSKRREAEKN 1120
BLAST of Spg022669 vs. ExPASy Swiss-Prot
Match:
O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)
HSP 1 Score: 1392.5 bits (3603), Expect = 0.0e+00
Identity = 688/1134 (60.67%), Postives = 871/1134 (76.81%), Query Frame = 0
Query: 6 RPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKS 65
R T+++SN+P++ +A +LL FL+ LG D+VFA+EI T R NWK R RVQFTTLE KS
Sbjct: 9 RSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKS 68
Query: 66 KAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGF-MLKEDRMSVLES 125
+AQ LS Q+ L+F +HNLR SE DDI+ RPV R R ++ +L VGF E R LE
Sbjct: 69 RAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 128
Query: 126 WDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGE--KLNALLLKVIFD 185
WDGV+ W++ E+RRVEFW+W CYK+EV FE+I+ET C+ G+ +++A LLK
Sbjct: 129 WDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLK---- 188
Query: 186 NGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIGQS 245
LKY P+++K+++ ++A++F +RYR CKED+D++W+RTT+FS +SIG S
Sbjct: 189 ---------LKYGPKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTS 248
Query: 246 TSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSG-LGSNLAYE 305
T FC E+ DIFS P+Y E DG+ F S ++IVPL+ + LG YE
Sbjct: 249 TCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYE 308
Query: 306 VEYQLNSLVHMQKISL-AAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 365
+ +QLN+LVH QKISL AA++ +LI L + L+TAL IL++LHQ IC+ P+ F+KTQ
Sbjct: 309 ILFQLNALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQ 368
Query: 366 LHVLKRNCKNPPSLSQKRLA-NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASD 425
+ + + K+ P+ + KRL N+M+C R VTPS+IY LGPELET+NYVVKNFA H SD
Sbjct: 369 MQSVVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSD 428
Query: 426 FMRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAF 485
FMRVTFVEEDWSKLPA A++ + + G F KP RT IY+R+++IL +GI +G KRFEFLAF
Sbjct: 429 FMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAF 488
Query: 486 SASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQ 545
SASQLR NSVWMFAS++ +KAE+IR+WMGCF KIRSISKCAARMGQLFS+S QTL+V Q
Sbjct: 489 SASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQ 548
Query: 546 DVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAV 605
DVE IPDIEV +DG DYCFSDGIGKISL+FA+QVA KCGL+++PSAFQIRYGGYKGVIAV
Sbjct: 549 DVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAV 608
Query: 606 DRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQ 665
DR+SFRKLSLRDSMLKF+S N+MLNVT+W++SMPC+LNREI+ LLSTLG++D FEA+Q
Sbjct: 609 DRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQA 668
Query: 666 EQLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLF 725
L +LG ML D+ AALNVL+ L+G +S N+LV+ML GY P+ EPYLSMML+ H+ +
Sbjct: 669 VHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQL 728
Query: 726 SDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSI 785
S+L+SRCRI VPKGRIL+GC+DE GIL YGQVY +TLTKAEL+ R+Q++F IDE S+
Sbjct: 729 SELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSV 788
Query: 786 LLGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGD 845
++G+VVVTKNPCLHPGD+RVL+AI+ V EEKG +DC+IFPQKGERPH NECSGGDLDGD
Sbjct: 789 VIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGD 848
Query: 846 LYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLV 905
+F+SWDE +IP + + PMDY G RPR+MDHDVTLEEI KFFVDYMI+DTLG ISTAHLV
Sbjct: 849 QFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLV 908
Query: 906 HADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISS 965
HADR+P+KA S KCLELA LHS AVDFAKTGAPAEMP LKPREFPDF+ERF+KP YIS
Sbjct: 909 HADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISE 968
Query: 966 NVLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMS 1025
+V GKLYR AVKS +R SE+T YD LE GFE+F++ A++++DMY EK++
Sbjct: 969 SVFGKLYR-AVKSSLAQRKPEAESEDT--VAYDVTLEEAGFESFIETAKAHRDMYGEKLT 1028
Query: 1026 ILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCA 1085
LM YYGA E+EIL G L+++ YL RDNR+YGDMKDRI LSVK L KEA WFE SC
Sbjct: 1029 SLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE 1088
Query: 1086 PHEH-KMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQAEK 1133
+ K +ASAWY+VTY+P++ E + + SFPW V DVLL+IKA N+++ E+
Sbjct: 1089 DEQQKKKLASAWYYVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQRQSVEE 1125
BLAST of Spg022669 vs. ExPASy Swiss-Prot
Match:
Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)
HSP 1 Score: 1115.1 bits (2883), Expect = 0.0e+00
Identity = 589/1136 (51.85%), Postives = 778/1136 (68.49%), Query Frame = 0
Query: 8 TLRVSNIPESAIAQDLLTFLKSKLG-SDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKSK 67
+LRVSNIP SA+A +LL F S + + FA EI + W SRG G VQF + A +
Sbjct: 11 SLRVSNIPPSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAAA 70
Query: 68 AQSLSVQNALV-FNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMSVLESW 127
A L+ L F L S + D++ R R L VG + E ++W
Sbjct: 71 AAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAW 130
Query: 128 DGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVIFDNGY 187
DGV+A V+P +RRV+ +L H Q YKLEV+FE++ + G L G + A+LL+
Sbjct: 131 DGVRAEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTLDG--MGAILLQ------- 190
Query: 188 ADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIGQSTSF 247
L Y PRI+ ISG + SRF +R+ CKED + WVR +F+ S G+ ++
Sbjct: 191 ------LNYAPRIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTL 250
Query: 248 CWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAYEVEYQ 307
++ + SDI S PF +L E + + G++S +VPL+ ++ YEV ++
Sbjct: 251 VLKLGKSALVSDILKSLPF-SGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFR 310
Query: 308 LNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQLHVLK 367
LNSL+HM KI N DL L L +D + I +++H+L+ C+ PL F++ + + +K
Sbjct: 311 LNSLMHMGKIVAKHVNADLFKALQELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMK 370
Query: 368 RN----CKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFM 427
R+ N +R +M CYRV +TPS+I+C GPE E +NYVVK+ +++ASDF+
Sbjct: 371 RSHNVLLSNEGEGEGER---KLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFV 430
Query: 428 RVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFSA 487
RVTFV+EDWSKL + A++ I++G FSKP++T +Y+RI++IL+ G IG K FEFLAFSA
Sbjct: 431 RVTFVDEDWSKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSA 490
Query: 488 SQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDV 547
SQLR NSVWMFAS+ SL A IR+WMG FE IRS+SKCAARMGQLFSSS QT V DV
Sbjct: 491 SQLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDV 550
Query: 548 EIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLN--YIPSAFQIRYGGYKGVIAV 607
E+IPDIE+ +DG Y FSDGIGKISL FA++VA GL+ +PSAFQIRYGGYKGVIA+
Sbjct: 551 EVIPDIEITTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAI 610
Query: 608 DRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQ 667
D S LSLR SM KFES+++MLN+T WS S PCY+NREI++LLSTLG++DE F A+QQ
Sbjct: 611 DPMSSIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQ 670
Query: 668 EQLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLF 727
+++R MLT+K AL+VL L G+++ V+ML GYEP+ EPYLSM+L+AH N
Sbjct: 671 DEMRETEEMLTNKEVALSVLGKLGGSET-KTAVKMLLQGYEPSSEPYLSMILKAHQENRL 730
Query: 728 SDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSI 787
+D+R+RC+I VPKGR+L+GCLDETG+L YGQVY IT E +D NQ++F+ D +
Sbjct: 731 TDIRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTAT 790
Query: 788 LLGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGD 847
++G+V +TKNPCLHPGD+RVLEAI+ +L G+VDCL+FPQ+GERPH NECSGGDLDGD
Sbjct: 791 VVGKVAITKNPCLHPGDIRVLEAIYDPDL--VGMVDCLVFPQRGERPHPNECSGGDLDGD 850
Query: 848 LYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLV 907
LYFI+WD+ LIP K + PMDYT RPRIMDH VTLEEIQK FVDYMIND+LGAISTAHL+
Sbjct: 851 LYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLI 910
Query: 908 HADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISS 967
HADR P KA S +CL+LA LHSMAVDFAKTGAPAEMPR L+PRE+PDFMER++KPMYIS+
Sbjct: 911 HADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISN 970
Query: 968 NVLGKLYRAAVKSIERERSRLVWSEETAR--ATYDHDLEVDGFEAFLDLAESYKDMYIEK 1027
VLGKLYR+A+ +E+ S +A+ TYD DLEV G + FL AE Y ++Y EK
Sbjct: 971 GVLGKLYRSAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEK 1030
Query: 1028 MSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENS 1087
++ LMNYY AE EDEIL G++R++ YL+RDN++Y +MKDRI+ +V L +EA+ W +S
Sbjct: 1031 LTTLMNYYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSS 1090
Query: 1088 CAPHEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQAEKN 1134
+ MASAWY VTYHP + F+ SFPW D LL IKA + + + +K+
Sbjct: 1091 RKEEDASRMASAWYRVTYHPDRRRGKRFW-SFPWIACDNLLAIKASSQLRRRRQKD 1123
BLAST of Spg022669 vs. ExPASy Swiss-Prot
Match:
Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)
HSP 1 Score: 760.0 bits (1961), Expect = 3.9e-218
Identity = 461/1142 (40.37%), Postives = 663/1142 (58.06%), Query Frame = 0
Query: 8 TLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKSKA 67
T++V P A+++ FL+ GS +V+AI++ + K R VQFT+ E ++
Sbjct: 4 TIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKV-RQPKKGGPRVYAIVQFTS-ERHTRL 63
Query: 68 QSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGI-LHVGFMLKEDRMSVLESWD 127
+ L + L+ E DIV +P A T +G+ + G + + L S
Sbjct: 64 IITAAAERLYYGRSYLKAFEVEQDIVPKP-RASLHTISGLKMFFGCQVSTKKFLTLWSAQ 123
Query: 128 GVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVIFDNGYA 187
V R++ F ++ Y+LE+ +E I + + G L+++VI
Sbjct: 124 DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVI------ 183
Query: 188 DDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIGQSTSFC 247
P+I++K + + D W+RTT+F++ IGQST+FC
Sbjct: 184 -------GAPKIFEK---EDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFC 243
Query: 248 WEIEEDLQASDIFSSFPFYME-SLKEFILEDGEEFGSTSE-IVPLIKSGLGSNLAYEVEY 307
E+ L D +F Y E F++E G + S + +VP++ G +L +E+ +
Sbjct: 244 LELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILF 303
Query: 308 QLNSLVHMQKISLAAANNDLIDFLSTLGLDTAL--NILQRLHQLKFICFKPLSFLKTQLH 367
+LN+LV +S A + D L+ D AL + L++L L C++P +L+ +
Sbjct: 304 KLNTLVQNACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYK 363
Query: 368 --VLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 427
+ K P++S L + ++ YRV VTP+R+Y GPE+ SN V+++++ + ++F
Sbjct: 364 KWISKGKLPLSPTIS---LDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNF 423
Query: 428 MRVTFVEEDWSKLPAGAVT--TSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLA 487
+RV+FV+ED K+ + ++ +S QR RT++Y RI ++LRDGIVIG K+FEFLA
Sbjct: 424 LRVSFVDEDLEKVRSMDLSPRSSTQR-------RTKLYDRIYSVLRDGIVIGDKKFEFLA 483
Query: 488 FSASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT 547
FS+SQLR NS WMFA D + A IR WMG F+ IR+++K AAR+GQ FSSS +TL V +
Sbjct: 484 FSSSQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRS 543
Query: 548 QDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGL-NYIPSAFQIRYGGYKGVI 607
++E+IPD+E+ S G Y FSDGIGKIS FAR+VA KCGL + PSAFQIRYGGYKGV+
Sbjct: 544 DEIEVIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVV 603
Query: 608 AVDRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEAL 667
AVD NS +KLSLR SM KFES+N L+V WS PCY+NR+++TLLSTLGV D FE
Sbjct: 604 AVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKK 663
Query: 668 QQEQLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWN 727
Q+E + L +LT + A L + ++ NIL ++ GY+P+ EP+LSMMLQ +
Sbjct: 664 QREVVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRAS 723
Query: 728 LFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETK 787
+LR++ RIF+ GR ++GCLDET L YGQV Q +
Sbjct: 724 KLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVVV-------------QYSDPMRPGRR 783
Query: 788 SILLGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLD 847
I+ G VVV KNPCLHPGDVRVL+A+ L +VDC++FPQKG RPH NECSG DLD
Sbjct: 784 FIITGPVVVAKNPCLHPGDVRVLQAVNVPALNH--MVDCVVFPQKGLRPHPNECSGSDLD 843
Query: 848 GDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAH 907
GD+YF+ WD+ L+PP+T PMDYT +I+DHDVT+EE++++F +Y++ND+LG I+ AH
Sbjct: 844 GDIYFVCWDQELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAH 903
Query: 908 LVHADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYI 967
AD+EP KA S C+ELA S AVDF KTG A +P+ L +E+PDFME+ DKP Y
Sbjct: 904 TAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYE 963
Query: 968 SSNVLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEK 1027
S NV+GKL+R + S ++ + A +YD D+EVDGFE ++D A K Y K
Sbjct: 964 SKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFK 1023
Query: 1028 MSILMNYYGAEYEDEILMGD-LRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFEN 1087
+ LM+YYG + E EIL G +R S+ +R + + I +V+ LRKE F
Sbjct: 1024 LGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRD------AESIGRAVRALRKETLSLFNA 1083
Query: 1088 SCAPHEHKMMASAWYHVTYHPSY---FKEDM---FYFSFPWTVSDVLLNIKAMNSKKHQA 1133
S ASAWYHVTYH SY + E + + SF W V D L+ IK N + Q
Sbjct: 1084 SEEEENESAKASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQR 1095
BLAST of Spg022669 vs. ExPASy Swiss-Prot
Match:
Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)
HSP 1 Score: 642.5 bits (1656), Expect = 9.0e-183
Identity = 350/741 (47.23%), Postives = 476/741 (64.24%), Query Frame = 0
Query: 394 SRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRT 453
S +Y GPE+ SN VV+NF+S +F+R++FV+ED KL A ++ G RT
Sbjct: 7 STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASG--HDANRT 66
Query: 454 EIYHRIMTILRDGIVIGTKRFEFLAFSASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKI 513
+Y R++++L DGI IG K FEFLAFS+SQLR NS WMFAS L A +IR WMG F I
Sbjct: 67 ALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNI 126
Query: 514 RSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQV 573
R+++K AAR+GQ FSSST+TL V +VE I DI+ +G + FSDGIGKIS +FA +V
Sbjct: 127 RNVAKYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEV 186
Query: 574 ADKCGL-NYIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSM 633
A KC L + PSAFQIRYGGYKGV+AVD S KLSLR SMLKF+S N ++V +S
Sbjct: 187 AMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQ 246
Query: 634 PCYLNREIVTLLSTLGVKDESFEALQQEQLRLLGRMLTDKVAALNVLENLNGADSDNILV 693
P +LNR+++TLLSTLGV+D FE Q+E + L +M+TD AA+ +E + + N +
Sbjct: 247 PGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVK 306
Query: 694 RMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVY 753
+L GY+P+ EPYLSM+LQ + +L+++ RI +PKGR ++GCLDET L YGQV+
Sbjct: 307 ELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVF 366
Query: 754 ACITLTKAELQDRNQNHFHTIDETKSILLGRVVVTKNPCLHPGDVRVLEAIFHVELEEKG 813
T N N T+ G+VV+ KNPCLHPGD+R+L A+ L
Sbjct: 367 IRAT------SGVNDNDRFTV-------TGKVVIAKNPCLHPGDIRILHAVDVPVLHH-- 426
Query: 814 LVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDV 873
+ +C++FPQ+G RPH NECSG DLDGD+YF+SWD +LIPP+ PMDYT +DHDV
Sbjct: 427 MFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDV 486
Query: 874 TLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKCLELAMLHSMAVDFAKTGAP 933
T+EE++++F +Y++N++LG I+ AH+V AD+E KA SS C+ELA L S+AVDF KTG P
Sbjct: 487 TIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVP 546
Query: 934 AEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIERERSRLVWSEETARATYD 993
A +P L +E+PDFME+ DK Y S V+GKLYR K + ++ E AR +YD
Sbjct: 547 ALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKH---FTREVARRSYD 606
Query: 994 HDLEVDGFEAFLDLAESYKDMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKY 1053
D+ VDG+E ++ A + KD Y K+ LM++YG + E EI+ G + A ++ K
Sbjct: 607 TDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMA----KNFTKK 666
Query: 1054 GDMKDRILLSVKTLRKEAKEWF------ENSCAPHEHKMMASAWYHVTYHPSYF------ 1113
D D I L+V++LRKEA+ F +N + ASAWYHVTYHP ++
Sbjct: 667 SD-ADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEG 719
Query: 1114 KEDMFYFSFPWTVSDVLLNIK 1122
E + SFPW + + LL IK
Sbjct: 727 YERPHFISFPWCIYEKLLRIK 719
BLAST of Spg022669 vs. ExPASy Swiss-Prot
Match:
Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)
HSP 1 Score: 540.0 bits (1390), Expect = 6.3e-152
Identity = 347/945 (36.72%), Postives = 515/945 (54.50%), Query Frame = 0
Query: 222 DYDYLWVRTTEFSAMRSIGQSTSFCWEIEEDLQASDIFSSFPFYMESLKEF------ILE 281
D D W+RTT+F+ + +IG+ S+ I + + F M ++E +
Sbjct: 245 DDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPPRIR 304
Query: 282 DGEEFGS-TSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLD 341
+ FG S+ I G +++E+ + +NS++H + D L D
Sbjct: 305 NEPCFGEPVSDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKD 364
Query: 342 TALNILQRLHQLKFICFKPLSFLKTQLHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPS 401
+ L+ L K F LK ++ KNP L + ++ R+++TP+
Sbjct: 365 VNIASLKHLCTYKRPVFDAYKRLKLVQEWIQ---KNPKLLGSHEQSEDISEIRRLVITPT 424
Query: 402 RIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAGAVT---TSIQRGIFSKPY 461
R YCL PE+E SN V++ + + A F+RVTF++E + + ++ I + + S +
Sbjct: 425 RAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSF 484
Query: 462 --RTEIYHRIMTILRDGIVIGTKRFEFLAFSASQLRSNSVWMFASSDSLKAEEIRQWMGC 521
+T ++ R+ +IL DG + +++ FLAFSA+QLR S W FA + +I+ WMG
Sbjct: 485 SQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGK 544
Query: 522 FEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEI-IPDIEVNSDGIDYCFSDGIGKISLS 581
F K ++++KCAARMG FSS+ T+ V +V+ +PDIE N Y FSDGIG I+
Sbjct: 545 F-KDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNG----YVFSDGIGTITPD 604
Query: 582 FARQVADKCGL--NYIPSAFQIRYGGYKGVIA--VDRNSFRKLSLRDSMLKFESKNKMLN 641
A +V +K L +Y P A+QIRY G+KGV+A ++ +L+LRDSM KF SK+ +L
Sbjct: 605 LADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILE 664
Query: 642 VTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLRLLGRMLTDKVAALNVLENLNG 701
+ W+ P +LNR+I+TLLS LGV DE F +Q+ L L R+L D A VL +
Sbjct: 665 ICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVL-TASC 724
Query: 702 ADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETG 761
A+ N ML+ G++P EP+L ML + LR + RIFV GR L+GCLDE G
Sbjct: 725 AEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAG 784
Query: 762 ILNYGQVYACITLTKAELQDRNQNHFHTIDETKS---ILLGRVVVTKNPCLHPGDVRVLE 821
IL +GQ + I ++K +++ H ETK+ ++ G V + KNPCLHPGDVR+LE
Sbjct: 785 ILEHGQCF--IQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILE 844
Query: 822 AIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPP--KTEAPMD 881
A+ +L + DCLIFPQKG+RPHTNE SG DLDGDLYF++WD+ LIPP K+ M
Sbjct: 845 AVDVPQLHH--MYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMH 904
Query: 882 YTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKCLELAML 941
Y + + V ++I FF + N+ LG I AH+VHADR A+ +CL LA L
Sbjct: 905 YDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAEL 964
Query: 942 HSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIERERSR 1001
+ AVDF KTG MP LKP+ +PDFM + D Y S+ +LG+LYR VK + E +
Sbjct: 965 AATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYR-RVKEVYDEDAE 1024
Query: 1002 LVWSEET--ARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSILMNYYGAEYEDEILMGD 1061
E T + YD LE+ GFE + A +K +Y ++ L+ Y + E+EI+ G
Sbjct: 1025 ASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGH 1084
Query: 1062 LRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAPHE----------HKMMA 1121
+ S Y ++K G++K+R+ S +L+KE ++ FE + HE ++ A
Sbjct: 1085 IWSMPKY---TSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKA 1144
BLAST of Spg022669 vs. ExPASy TrEMBL
Match:
A0A6J1C343 (RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111007004 PE=3 SV=1)
HSP 1 Score: 2085.1 bits (5401), Expect = 0.0e+00
Identity = 1031/1135 (90.84%), Postives = 1084/1135 (95.51%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPERPTL+VSNIPESAIAQDLLTFL SKLG DS+FAIEIFTERKNWKSRGSGRVQF T
Sbjct: 1 MAQPERPTLKVSNIPESAIAQDLLTFLNSKLGPDSIFAIEIFTERKNWKSRGSGRVQFAT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
L AKS AQSLSVQ+ LVFNSHNLRFSETNDDIVVRPV A +RT NG LHVGFMLKE+RMS
Sbjct: 61 LAAKSIAQSLSVQHDLVFNSHNLRFSETNDDIVVRPVLATHRTHNGGLHVGFMLKENRMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESWDGVKAWVMPERRRV+FW+ H+ + YKLE+MFEEILE+TG GGEKLNALL+K
Sbjct: 121 VLESWDGVKAWVMPERRRVDFWICHQGETYKLELMFEEILESTGLSFGGEKLNALLIK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKYVPRIYKKISGSNMA++FS RYRLCKEDYDYLWVRTTEFSAMRSIG
Sbjct: 181 -----------LKYVPRIYKKISGSNMATKFSSTRYRLCKEDYDYLWVRTTEFSAMRSIG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWEIEEDLQASD+FSSFPFY E+LK+F+LE+GEEFGSTSEIVPLIKSGLGSNLAY
Sbjct: 241 QSTSFCWEIEEDLQASDVFSSFPFYKENLKDFVLEEGEEFGSTSEIVPLIKSGLGSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EV+YQLNSLVHMQKISLAAANNDL+DFLSTL ++TALNILQ+LHQLKFIC++PLSFLKTQ
Sbjct: 301 EVQYQLNSLVHMQKISLAAANNDLVDFLSTLSVETALNILQKLHQLKFICYEPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHVLKRNCKN PS SQKRL+NN+MNCYR LVTPSRIYCLGPELETSNYVVKNFAS+ASDF
Sbjct: 361 LHVLKRNCKNLPSSSQKRLSNNLMNCYRALVTPSRIYCLGPELETSNYVVKNFASYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSI+RGIFSKPYRTEIYHR+MTILRDGIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIERGIFSKPYRTEIYHRVMTILRDGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFAS+D+LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSS QTLVVP+QD
Sbjct: 481 ASQLRSNSVWMFASNDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSMQTLVVPSQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCG+N+IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LLGRMLT+KVAAL+VLENLNG SDNILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLGRMLTNKVAALDVLENLNGVKSDNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+ELQDRNQN+FH IDET SIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQDRNQNYFHKIDETTSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLV+CL+FPQKGERPHTNECSGGDLDGDL
Sbjct: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVNCLVFPQKGERPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKA+SSKCLELA LHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN
Sbjct: 901 ADREPKKAISSKCLELATLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVKSIERERSRLVWSEETARA YD DLEVDGFE FL++AES+KDMY EKMSI
Sbjct: 961 VLGKLYRAAVKSIERERSRLVWSEETARAIYDCDLEVDGFETFLEMAESFKDMYTEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDE+LMGDLR+RASYLQRDNRKYGDMKDRIL+SVKTLRKE +EWFENSCAP
Sbjct: 1021 LMNYYGAEYEDELLMGDLRNRASYLQRDNRKYGDMKDRILISVKTLRKEVREWFENSCAP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQA-EKNC 1135
HEHK MASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSK+HQA E+NC
Sbjct: 1081 HEHKPMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHQAEERNC 1122
BLAST of Spg022669 vs. ExPASy TrEMBL
Match:
A0A6J1E171 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111429858 PE=3 SV=1)
HSP 1 Score: 2077.4 bits (5381), Expect = 0.0e+00
Identity = 1025/1133 (90.47%), Postives = 1080/1133 (95.32%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
M QPER TLRVSN+PESA+A+DLLTFLKSKLG DSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MGQPERSTLRVSNVPESAVAEDLLTFLKSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
LEAKSKAQSLSVQN LVF++HNLRFSETNDDI+VRP+H RNRTENG+LHVGFMLKED MS
Sbjct: 61 LEAKSKAQSLSVQNNLVFSTHNLRFSETNDDIIVRPIHGRNRTENGVLHVGFMLKEDHMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESW+GVKAW+MPERRRVEFW+W +++CYKLEVMFEEILETTGYCLG EKLNALLLK
Sbjct: 121 VLESWEGVKAWIMPERRRVEFWIWREDECYKLEVMFEEILETTGYCLGDEKLNALLLK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKY PRIYKKISGSNMA +FS +RYRLCKE++DYLW+RTTEFS++RSIG
Sbjct: 181 -----------LKYAPRIYKKISGSNMAYKFSSSRYRLCKEEHDYLWIRTTEFSSLRSIG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWE+EEDLQASD+FSSFP Y E+ K+ LEDG EFGSTSE VPLIKSGL SNLAY
Sbjct: 241 QSTSFCWEVEEDLQASDMFSSFPLYRETPKDITLEDGGEFGSTSEAVPLIKSGLVSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EV+YQLNSLVHMQKISLAAA+NDLIDFLSTLG DTALNILQRLHQLKFIC+ PLSFLKTQ
Sbjct: 301 EVQYQLNSLVHMQKISLAAASNDLIDFLSTLGTDTALNILQRLHQLKFICYDPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHVLKRNCK PSLSQKRL+NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDF
Sbjct: 361 LHVLKRNCKVLPSLSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSIQRG+ SKPYRTEIYHRI++ILR+GIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIQRGLLSKPYRTEIYHRIVSILRNGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFASS++LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD
Sbjct: 481 ASQLRSNSVWMFASSNNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGL +IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLTHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTK SDSMPCYLNREIVTLLSTLGVKDESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKCSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LL RMLTDKVAALNVLENLNGADS+NILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLRRMLTDKVAALNVLENLNGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+EL+DRNQN+FH IDETKSIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELRDRNQNYFHKIDETKSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LG+VVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL
Sbjct: 781 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKALSSKCLELA LHSMAVD+AKTGAPAEMPRVLKPREFPDFMERFDKPMY S+N
Sbjct: 901 ADREPKKALSSKCLELAALHSMAVDYAKTGAPAEMPRVLKPREFPDFMERFDKPMYKSNN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVK++E+ERSRLVW+EETA A YDHDLEVDGFEAFL+ AES+K MYIEKMSI
Sbjct: 961 VLGKLYRAAVKTMEQERSRLVWTEETATAIYDHDLEVDGFEAFLETAESFKVMYIEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVK +RKEAKEWFENSCAP
Sbjct: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKCVRKEAKEWFENSCAP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQAEKN 1134
HEHKMMASAWYHVTYHPSYFK+DMFYFSFPW V DVLLNIKAMNSK+ +AEKN
Sbjct: 1081 HEHKMMASAWYHVTYHPSYFKQDMFYFSFPWIVHDVLLNIKAMNSKRREAEKN 1120
BLAST of Spg022669 vs. ExPASy TrEMBL
Match:
A0A6J1JJ96 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111485606 PE=3 SV=1)
HSP 1 Score: 2075.8 bits (5377), Expect = 0.0e+00
Identity = 1024/1133 (90.38%), Postives = 1080/1133 (95.32%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPER TLRVSN+PESA+A+DLLTFLKSKLG DSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MAQPERSTLRVSNVPESAVAEDLLTFLKSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
L AKSKAQSLSVQN LVFN+HNLRFSETNDDI+VRP+HARNRTENG+LHVGFMLKED MS
Sbjct: 61 LGAKSKAQSLSVQNNLVFNTHNLRFSETNDDIIVRPIHARNRTENGVLHVGFMLKEDHMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESW+GVKAW+MPERRRVEFW+W +++CYKLEVMFEEILETTGYCLG EKLNALLLK
Sbjct: 121 VLESWEGVKAWIMPERRRVEFWIWREDECYKLEVMFEEILETTGYCLGDEKLNALLLK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKY PRIYKKISGSNMAS+FS +RYRLCKE++DYLW+RTTEFS++RSIG
Sbjct: 181 -----------LKYAPRIYKKISGSNMASKFSSSRYRLCKEEHDYLWIRTTEFSSLRSIG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWE+EEDLQASDIFSSFP Y E+ K+ LEDG EFGSTSE VPLIKSGL SNLAY
Sbjct: 241 QSTSFCWEVEEDLQASDIFSSFPLYRETPKDITLEDGGEFGSTSEAVPLIKSGLVSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EV+YQLNSLVHMQKISLAAANNDLI+FLSTLG DTALNILQRLHQLK IC+ PLSFLKTQ
Sbjct: 301 EVQYQLNSLVHMQKISLAAANNDLIEFLSTLGTDTALNILQRLHQLKLICYDPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHVLKRNCK PSLSQKRL+NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDF
Sbjct: 361 LHVLKRNCKVLPSLSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSIQRG+ SKPYRTEIYHRI++ILR+GIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIQRGLLSKPYRTEIYHRIVSILRNGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFASSD+LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD
Sbjct: 481 ASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGL +IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLTHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKF+SKNKMLNVTK SDSMPCYLNREIVTLLSTLGVKDESF+ALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFKSKNKMLNVTKCSDSMPCYLNREIVTLLSTLGVKDESFKALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LL RMLTDKVAALNVLENLNGADS+NILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLRRMLTDKVAALNVLENLNGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGIL+YGQVYACITL+K+EL+DRNQN+FH IDETKSIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILDYGQVYACITLSKSELRDRNQNYFHKIDETKSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LG+VVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL
Sbjct: 781 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENL+PPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLVPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKALSSKCLELA LHSMAVD+AKTGAPAEMPRVLKPREFPDFMERFDKPMY S+N
Sbjct: 901 ADREPKKALSSKCLELAALHSMAVDYAKTGAPAEMPRVLKPREFPDFMERFDKPMYKSNN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVK++E+ERSRLVW+EETA A YDHDLEVDGFEAFL+ AES+K MYIEKMSI
Sbjct: 961 VLGKLYRAAVKTMEQERSRLVWTEETATAIYDHDLEVDGFEAFLETAESFKVMYIEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVK +RKEAKEWFENSCAP
Sbjct: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKCIRKEAKEWFENSCAP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQAEKN 1134
HEHKMMASAWYHVTYHPSYFK DMFYFSFPW V DVLLNIKAMNSK+ +AEKN
Sbjct: 1081 HEHKMMASAWYHVTYHPSYFKRDMFYFSFPWIVHDVLLNIKAMNSKRREAEKN 1120
BLAST of Spg022669 vs. ExPASy TrEMBL
Match:
A0A1S3BVE2 (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103493922 PE=3 SV=1)
HSP 1 Score: 2066.6 bits (5353), Expect = 0.0e+00
Identity = 1019/1130 (90.18%), Postives = 1068/1130 (94.51%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPER TLRVSN+PESAIAQDLL FL SKLG DSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
LEAK+KA +LSVQN LVF + NLRFS NDDIVVRPVHA NRTENG+LHVGFMLKE+RMS
Sbjct: 61 LEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESW+GVKAW+MPERRR+EFW+WH+++CYKLEVMFEEILETTGYCLG EKLNALL K
Sbjct: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGYCLGEEKLNALLFK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKY PRIYKKISGSNMAS+FS RYRLC EDYDYLWVRTTEFS MRS+G
Sbjct: 181 -----------LKYAPRIYKKISGSNMASKFSSTRYRLCVEDYDYLWVRTTEFSPMRSVG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWE+EEDLQASDIFS FPFY E+ K+ +LEDGEEF STSEIVPLIKSGLGSNLAY
Sbjct: 241 QSTSFCWEVEEDLQASDIFSYFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EVEYQLNSLVHMQKISLAAAN DLIDFL TL +DTALN+LQRLHQLKFIC+ PLSFLKTQ
Sbjct: 301 EVEYQLNSLVHMQKISLAAANQDLIDFLCTLDIDTALNVLQRLHQLKFICYDPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHV KRNCK+ P SQKRL+NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNF+S+ASDF
Sbjct: 361 LHVFKRNCKSLPLSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSIQRGI SKPYRT IYHRI+TILRDGIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTNIYHRIVTILRDGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFASSD+LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD
Sbjct: 481 ASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCG+N+IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTK DSMPCYLNREIVTLLSTLGVKDESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LL RMLTDK ALNVLENL+GADS+NILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLKRMLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+ELQ+RNQN+FHTIDETKSIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
+G+VVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDGDL
Sbjct: 781 IGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGPRPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKALS+KCLELA LHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN
Sbjct: 901 ADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAA+KSIE+ERSRLVWSEE ARA YDHDLEVDGFEAFL++AE+YK+MYIEKMSI
Sbjct: 961 VLGKLYRAAIKSIEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVK+LRKE KEWFENSC P
Sbjct: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKSLRKEVKEWFENSCDP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQA 1131
H+ +MMASAWYHVTYHPSYFKEDMFYFSFPW VSDVLLNIKA NSK+HQA
Sbjct: 1081 HQRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKATNSKRHQA 1117
BLAST of Spg022669 vs. ExPASy TrEMBL
Match:
E9NWK9 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_1G005580 PE=2 SV=1)
HSP 1 Score: 2057.3 bits (5329), Expect = 0.0e+00
Identity = 1016/1130 (89.91%), Postives = 1065/1130 (94.25%), Query Frame = 0
Query: 1 MAQPERPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPER TLRVSN+PESAIAQDLL FL SKLG DSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKSKAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGFMLKEDRMS 120
LEAK+KA SLSVQN+LVF + NLRFS NDDIVVRPVHA NRTENG+LHVGFMLKE+RMS
Sbjct: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
Query: 121 VLESWDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVI 180
VLESW+GVKAW+MPERRR+EFW+WH+++CYKLEVMFEEILETTG+CLG EKLNALLLK
Sbjct: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLK-- 180
Query: 181 FDNGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIG 240
LKY PRIYKKISGSNMASRFS RYRLC EDYDYLWVRTTEFS MRS+G
Sbjct: 181 -----------LKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVG 240
Query: 241 QSTSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSGLGSNLAY 300
QSTSFCWE+EEDLQASDIFS FPFY E+ K+ +LEDGEEF STSEIVPLIKSGLGSNLAY
Sbjct: 241 QSTSFCWEVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAY 300
Query: 301 EVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 360
EVEYQLNSLVHMQKISL+AAN DLIDFL TL +DTALN+LQRLHQLKF+C+ PLSFLKTQ
Sbjct: 301 EVEYQLNSLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQ 360
Query: 361 LHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 420
LHV KRNCK+ P SQKRL+NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNF+S+ASDF
Sbjct: 361 LHVYKRNCKSLPPSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDF 420
Query: 421 MRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAFS 480
MRVTFVEEDWSKLPAGAVTTSIQRGI SKPYRTEIYHRIMT+LRDGIVIG KRFEFLAFS
Sbjct: 421 MRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFS 480
Query: 481 ASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQD 540
ASQLRSNSVWMFASSD+LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT+D
Sbjct: 481 ASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRD 540
Query: 541 VEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAVD 600
VEIIPDIEVN+DGIDYCFSDGIGKISLSFARQVADKCG+N+IPSAFQIRYGGYKGVIAVD
Sbjct: 541 VEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVD 600
Query: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQE 660
RNSFRKLSLRDSMLKFESKNKMLNVTK DSMPCYLNREI TLLSTLGVKDESFEALQQE
Sbjct: 601 RNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQE 660
Query: 661 QLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
QL LL RMLTDK ALNVLEN +GADS+NILV+MLNHGYEPNIEPYLSMMLQAHYWNLFS
Sbjct: 661 QLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 720
Query: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSIL 780
DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK+ELQ RNQN+FHTIDETKSIL
Sbjct: 721 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSIL 780
Query: 781 LGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDL 840
LG+VVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDGDL
Sbjct: 781 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDL 840
Query: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVH 900
YFISWDENLIPPKTEAPMDYTGRRPRIMDHDV LEEIQKFFVDYMINDTLGAISTAHLVH
Sbjct: 841 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVH 900
Query: 901 ADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
ADREPKKALS+KCLELA LHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN
Sbjct: 901 ADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 960
Query: 961 VLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSI 1020
VLGKLYRAAVKSIE+ERSRLVWSEE ARA YD+DLEVDGFEAFL++AE+YK+MYIEKMSI
Sbjct: 961 VLGKLYRAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSI 1020
Query: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAP 1080
LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVK LRKE KEWFENSC P
Sbjct: 1021 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDP 1080
Query: 1081 HEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQA 1131
+MMASAWYHVTYHPSYFKEDMFYFSFPW VSDVLLNIKAMNSK+HQA
Sbjct: 1081 LNRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA 1117
BLAST of Spg022669 vs. TAIR 10
Match:
AT4G11130.1 (RNA-dependent RNA polymerase 2 )
HSP 1 Score: 1392.5 bits (3603), Expect = 0.0e+00
Identity = 688/1134 (60.67%), Postives = 871/1134 (76.81%), Query Frame = 0
Query: 6 RPTLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKS 65
R T+++SN+P++ +A +LL FL+ LG D+VFA+EI T R NWK R RVQFTTLE KS
Sbjct: 9 RSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKS 68
Query: 66 KAQSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGILHVGF-MLKEDRMSVLES 125
+AQ LS Q+ L+F +HNLR SE DDI+ RPV R R ++ +L VGF E R LE
Sbjct: 69 RAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 128
Query: 126 WDGVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGE--KLNALLLKVIFD 185
WDGV+ W++ E+RRVEFW+W CYK+EV FE+I+ET C+ G+ +++A LLK
Sbjct: 129 WDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLK---- 188
Query: 186 NGYADDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIGQS 245
LKY P+++K+++ ++A++F +RYR CKED+D++W+RTT+FS +SIG S
Sbjct: 189 ---------LKYGPKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTS 248
Query: 246 TSFCWEIEEDLQASDIFSSFPFYMESLKEFILEDGEEFGSTSEIVPLIKSG-LGSNLAYE 305
T FC E+ DIFS P+Y E DG+ F S ++IVPL+ + LG YE
Sbjct: 249 TCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYE 308
Query: 306 VEYQLNSLVHMQKISL-AAANNDLIDFLSTLGLDTALNILQRLHQLKFICFKPLSFLKTQ 365
+ +QLN+LVH QKISL AA++ +LI L + L+TAL IL++LHQ IC+ P+ F+KTQ
Sbjct: 309 ILFQLNALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQ 368
Query: 366 LHVLKRNCKNPPSLSQKRLA-NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASD 425
+ + + K+ P+ + KRL N+M+C R VTPS+IY LGPELET+NYVVKNFA H SD
Sbjct: 369 MQSVVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSD 428
Query: 426 FMRVTFVEEDWSKLPAGAVTTSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLAF 485
FMRVTFVEEDWSKLPA A++ + + G F KP RT IY+R+++IL +GI +G KRFEFLAF
Sbjct: 429 FMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAF 488
Query: 486 SASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQ 545
SASQLR NSVWMFAS++ +KAE+IR+WMGCF KIRSISKCAARMGQLFS+S QTL+V Q
Sbjct: 489 SASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQ 548
Query: 546 DVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGLNYIPSAFQIRYGGYKGVIAV 605
DVE IPDIEV +DG DYCFSDGIGKISL+FA+QVA KCGL+++PSAFQIRYGGYKGVIAV
Sbjct: 549 DVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAV 608
Query: 606 DRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQ 665
DR+SFRKLSLRDSMLKF+S N+MLNVT+W++SMPC+LNREI+ LLSTLG++D FEA+Q
Sbjct: 609 DRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQA 668
Query: 666 EQLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLF 725
L +LG ML D+ AALNVL+ L+G +S N+LV+ML GY P+ EPYLSMML+ H+ +
Sbjct: 669 VHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQL 728
Query: 726 SDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSI 785
S+L+SRCRI VPKGRIL+GC+DE GIL YGQVY +TLTKAEL+ R+Q++F IDE S+
Sbjct: 729 SELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSV 788
Query: 786 LLGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGD 845
++G+VVVTKNPCLHPGD+RVL+AI+ V EEKG +DC+IFPQKGERPH NECSGGDLDGD
Sbjct: 789 VIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGD 848
Query: 846 LYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLV 905
+F+SWDE +IP + + PMDY G RPR+MDHDVTLEEI KFFVDYMI+DTLG ISTAHLV
Sbjct: 849 QFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLV 908
Query: 906 HADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISS 965
HADR+P+KA S KCLELA LHS AVDFAKTGAPAEMP LKPREFPDF+ERF+KP YIS
Sbjct: 909 HADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISE 968
Query: 966 NVLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEKMS 1025
+V GKLYR AVKS +R SE+T YD LE GFE+F++ A++++DMY EK++
Sbjct: 969 SVFGKLYR-AVKSSLAQRKPEAESEDT--VAYDVTLEEAGFESFIETAKAHRDMYGEKLT 1028
Query: 1026 ILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCA 1085
LM YYGA E+EIL G L+++ YL RDNR+YGDMKDRI LSVK L KEA WFE SC
Sbjct: 1029 SLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCE 1088
Query: 1086 PHEH-KMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKKHQAEK 1133
+ K +ASAWY+VTY+P++ E + + SFPW V DVLL+IKA N+++ E+
Sbjct: 1089 DEQQKKKLASAWYYVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQRQSVEE 1125
BLAST of Spg022669 vs. TAIR 10
Match:
AT1G14790.1 (RNA-dependent RNA polymerase 1 )
HSP 1 Score: 760.0 bits (1961), Expect = 2.7e-219
Identity = 461/1142 (40.37%), Postives = 663/1142 (58.06%), Query Frame = 0
Query: 8 TLRVSNIPESAIAQDLLTFLKSKLGSDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKSKA 67
T++V P A+++ FL+ GS +V+AI++ + K R VQFT+ E ++
Sbjct: 4 TIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKV-RQPKKGGPRVYAIVQFTS-ERHTRL 63
Query: 68 QSLSVQNALVFNSHNLRFSETNDDIVVRPVHARNRTENGI-LHVGFMLKEDRMSVLESWD 127
+ L + L+ E DIV +P A T +G+ + G + + L S
Sbjct: 64 IITAAAERLYYGRSYLKAFEVEQDIVPKP-RASLHTISGLKMFFGCQVSTKKFLTLWSAQ 123
Query: 128 GVKAWVMPERRRVEFWLWHKEQCYKLEVMFEEILETTGYCLGGEKLNALLLKVIFDNGYA 187
V R++ F ++ Y+LE+ +E I + + G L+++VI
Sbjct: 124 DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVI------ 183
Query: 188 DDLICLKYVPRIYKKISGSNMASRFSCNRYRLCKEDYDYLWVRTTEFSAMRSIGQSTSFC 247
P+I++K + + D W+RTT+F++ IGQST+FC
Sbjct: 184 -------GAPKIFEK---EDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFC 243
Query: 248 WEIEEDLQASDIFSSFPFYME-SLKEFILEDGEEFGSTSE-IVPLIKSGLGSNLAYEVEY 307
E+ L D +F Y E F++E G + S + +VP++ G +L +E+ +
Sbjct: 244 LELPVHLNVPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILF 303
Query: 308 QLNSLVHMQKISLAAANNDLIDFLSTLGLDTAL--NILQRLHQLKFICFKPLSFLKTQLH 367
+LN+LV +S A + D L+ D AL + L++L L C++P +L+ +
Sbjct: 304 KLNTLVQNACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYK 363
Query: 368 --VLKRNCKNPPSLSQKRLANNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDF 427
+ K P++S L + ++ YRV VTP+R+Y GPE+ SN V+++++ + ++F
Sbjct: 364 KWISKGKLPLSPTIS---LDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNF 423
Query: 428 MRVTFVEEDWSKLPAGAVT--TSIQRGIFSKPYRTEIYHRIMTILRDGIVIGTKRFEFLA 487
+RV+FV+ED K+ + ++ +S QR RT++Y RI ++LRDGIVIG K+FEFLA
Sbjct: 424 LRVSFVDEDLEKVRSMDLSPRSSTQR-------RTKLYDRIYSVLRDGIVIGDKKFEFLA 483
Query: 488 FSASQLRSNSVWMFASSDSLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT 547
FS+SQLR NS WMFA D + A IR WMG F+ IR+++K AAR+GQ FSSS +TL V +
Sbjct: 484 FSSSQLRENSAWMFAPIDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRS 543
Query: 548 QDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGL-NYIPSAFQIRYGGYKGVI 607
++E+IPD+E+ S G Y FSDGIGKIS FAR+VA KCGL + PSAFQIRYGGYKGV+
Sbjct: 544 DEIEVIPDVEIISLGTRYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVV 603
Query: 608 AVDRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEAL 667
AVD NS +KLSLR SM KFES+N L+V WS PCY+NR+++TLLSTLGV D FE
Sbjct: 604 AVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKK 663
Query: 668 QQEQLRLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWN 727
Q+E + L +LT + A L + ++ NIL ++ GY+P+ EP+LSMMLQ +
Sbjct: 664 QREVVDRLDAILTHPLEAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRAS 723
Query: 728 LFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETK 787
+LR++ RIF+ GR ++GCLDET L YGQV Q +
Sbjct: 724 KLLELRTKTRIFISGGRSMMGCLDETRTLEYGQVVV-------------QYSDPMRPGRR 783
Query: 788 SILLGRVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLD 847
I+ G VVV KNPCLHPGDVRVL+A+ L +VDC++FPQKG RPH NECSG DLD
Sbjct: 784 FIITGPVVVAKNPCLHPGDVRVLQAVNVPALNH--MVDCVVFPQKGLRPHPNECSGSDLD 843
Query: 848 GDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAH 907
GD+YF+ WD+ L+PP+T PMDYT +I+DHDVT+EE++++F +Y++ND+LG I+ AH
Sbjct: 844 GDIYFVCWDQELVPPRTSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAH 903
Query: 908 LVHADREPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYI 967
AD+EP KA S C+ELA S AVDF KTG A +P+ L +E+PDFME+ DKP Y
Sbjct: 904 TAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYE 963
Query: 968 SSNVLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEVDGFEAFLDLAESYKDMYIEK 1027
S NV+GKL+R + S ++ + A +YD D+EVDGFE ++D A K Y K
Sbjct: 964 SKNVIGKLFREVKERAPPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFK 1023
Query: 1028 MSILMNYYGAEYEDEILMGD-LRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFEN 1087
+ LM+YYG + E EIL G +R S+ +R + + I +V+ LRKE F
Sbjct: 1024 LGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRD------AESIGRAVRALRKETLSLFNA 1083
Query: 1088 SCAPHEHKMMASAWYHVTYHPSY---FKEDM---FYFSFPWTVSDVLLNIKAMNSKKHQA 1133
S ASAWYHVTYH SY + E + + SF W V D L+ IK N + Q
Sbjct: 1084 SEEEENESAKASAWYHVTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQR 1095
BLAST of Spg022669 vs. TAIR 10
Match:
AT3G49500.1 (RNA-dependent RNA polymerase 6 )
HSP 1 Score: 540.0 bits (1390), Expect = 4.5e-153
Identity = 347/945 (36.72%), Postives = 515/945 (54.50%), Query Frame = 0
Query: 222 DYDYLWVRTTEFSAMRSIGQSTSFCWEIEEDLQASDIFSSFPFYMESLKEF------ILE 281
D D W+RTT+F+ + +IG+ S+ I + + F M ++E +
Sbjct: 245 DDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPPRIR 304
Query: 282 DGEEFGS-TSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLAAANNDLIDFLSTLGLD 341
+ FG S+ I G +++E+ + +NS++H + D L D
Sbjct: 305 NEPCFGEPVSDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKD 364
Query: 342 TALNILQRLHQLKFICFKPLSFLKTQLHVLKRNCKNPPSLSQKRLANNVMNCYRVLVTPS 401
+ L+ L K F LK ++ KNP L + ++ R+++TP+
Sbjct: 365 VNIASLKHLCTYKRPVFDAYKRLKLVQEWIQ---KNPKLLGSHEQSEDISEIRRLVITPT 424
Query: 402 RIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAGAVT---TSIQRGIFSKPY 461
R YCL PE+E SN V++ + + A F+RVTF++E + + ++ I + + S +
Sbjct: 425 RAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSF 484
Query: 462 --RTEIYHRIMTILRDGIVIGTKRFEFLAFSASQLRSNSVWMFASSDSLKAEEIRQWMGC 521
+T ++ R+ +IL DG + +++ FLAFSA+QLR S W FA + +I+ WMG
Sbjct: 485 SQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGK 544
Query: 522 FEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEI-IPDIEVNSDGIDYCFSDGIGKISLS 581
F K ++++KCAARMG FSS+ T+ V +V+ +PDIE N Y FSDGIG I+
Sbjct: 545 F-KDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNG----YVFSDGIGTITPD 604
Query: 582 FARQVADKCGL--NYIPSAFQIRYGGYKGVIA--VDRNSFRKLSLRDSMLKFESKNKMLN 641
A +V +K L +Y P A+QIRY G+KGV+A ++ +L+LRDSM KF SK+ +L
Sbjct: 605 LADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILE 664
Query: 642 VTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLRLLGRMLTDKVAALNVLENLNG 701
+ W+ P +LNR+I+TLLS LGV DE F +Q+ L L R+L D A VL +
Sbjct: 665 ICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVL-TASC 724
Query: 702 ADSDNILVRMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETG 761
A+ N ML+ G++P EP+L ML + LR + RIFV GR L+GCLDE G
Sbjct: 725 AEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAG 784
Query: 762 ILNYGQVYACITLTKAELQDRNQNHFHTIDETKS---ILLGRVVVTKNPCLHPGDVRVLE 821
IL +GQ + I ++K +++ H ETK+ ++ G V + KNPCLHPGDVR+LE
Sbjct: 785 ILEHGQCF--IQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILE 844
Query: 822 AIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPP--KTEAPMD 881
A+ +L + DCLIFPQKG+RPHTNE SG DLDGDLYF++WD+ LIPP K+ M
Sbjct: 845 AVDVPQLHH--MYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMH 904
Query: 882 YTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKCLELAML 941
Y + + V ++I FF + N+ LG I AH+VHADR A+ +CL LA L
Sbjct: 905 YDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAEL 964
Query: 942 HSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIERERSR 1001
+ AVDF KTG MP LKP+ +PDFM + D Y S+ +LG+LYR VK + E +
Sbjct: 965 AATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYR-RVKEVYDEDAE 1024
Query: 1002 LVWSEET--ARATYDHDLEVDGFEAFLDLAESYKDMYIEKMSILMNYYGAEYEDEILMGD 1061
E T + YD LE+ GFE + A +K +Y ++ L+ Y + E+EI+ G
Sbjct: 1025 ASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGH 1084
Query: 1062 LRSRASYLQRDNRKYGDMKDRILLSVKTLRKEAKEWFENSCAPHE----------HKMMA 1121
+ S Y ++K G++K+R+ S +L+KE ++ FE + HE ++ A
Sbjct: 1085 IWSMPKY---TSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKA 1144
BLAST of Spg022669 vs. TAIR 10
Match:
AT2G19930.1 (RNA-dependent RNA polymerase family protein )
HSP 1 Score: 129.8 bits (325), Expect = 1.4e-29
Identity = 156/577 (27.04%), Postives = 242/577 (41.94%), Query Frame = 0
Query: 526 LFSSSTQTLVVPTQDV--EIIPDIEV-NSDGIDY--------CFSDGIGKISLSFARQVA 585
L S T+TL V + + I DI + DG D SDG G IS AR
Sbjct: 355 LILSKTKTLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARM-- 414
Query: 586 DKCGLNYIPS--------------------AFQIRYGGY--KGVIAVD----------RN 645
C LN F++ Y GY KG ++ R
Sbjct: 415 --CPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRP 474
Query: 646 SFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQEQL 705
S K+S S+ F + N + VT + L++ +V LLS G+ +E F + L
Sbjct: 475 SMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTL 534
Query: 706 RLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGY---EPNIEPYLSMMLQAHYWNLF 765
+ +K AALN N D N +M+ G EP+++ YLS++L+
Sbjct: 535 EESKSIFYNKRAALNAALNYGEMDDQN-AAQMILVGIPLDEPHLKNYLSILLKTEK---- 594
Query: 766 SDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSI 825
+DL++ ++ V + L+G +D TG L +V C+ L ++
Sbjct: 595 NDLKAG-KLPVTESYYLMGTVDPTGALKEDEV--CVILESGQIS---------------- 654
Query: 826 LLGRVVVTKNPCLHPGDVRVLEAIFHVELEE--KGLVDCLIFPQKGERPHTNECSGGDLD 885
G V+V +NP LH GD+ +L+A + LEE + FPQKG R +E +GGD D
Sbjct: 655 --GEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFD 714
Query: 886 GDLYFISWD----ENLIPPK-----TEAPMDYTGRRPRIMDHDVTLEEIQKFFV--DYMI 945
GD+YFIS + EN P + T +GR P + + EE+ + F+ +
Sbjct: 715 GDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHA 774
Query: 946 NDTLGAISTAHLVHADR---------EPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPR 1005
++ +G + + L DR E K + K LEL ++ A+D K G +P
Sbjct: 775 SNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPN 834
Query: 1006 VLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIERERSRLVWSEETARATYDHDLEV 1035
LKP FP +MER K + S+++LG ++ E S S E ++ D V
Sbjct: 835 KLKPDIFPHYMERDKK--FQSTSILGLIFDFVKSQTTEEPSP---SSEISKLPCFEDEPV 894
BLAST of Spg022669 vs. TAIR 10
Match:
AT2G19920.1 (RNA-dependent RNA polymerase family protein )
HSP 1 Score: 112.1 bits (279), Expect = 3.0e-24
Identity = 135/509 (26.52%), Postives = 215/509 (42.24%), Query Frame = 0
Query: 526 LFSSSTQTLVVPTQDVEI--IPDI----EVNSDGID-----YCFSDGIGKISLSFARQVA 585
L S T+ L V ++ + I DI + N+D +D SDG G IS AR
Sbjct: 359 LILSKTKKLEVDMTEITVMQIDDIHCHDQSNNDVLDKNGKPRIHSDGTGYISEDLARM-- 418
Query: 586 DKCGLNYI------------------PSAFQIRY----GGYKGVIAVDRN-SFRKLSLRD 645
C LN P QIR KG+ +++N + + +R
Sbjct: 419 --CPLNIFKGKSMRSNNIQGTCVQEPPLLIQIRMFNDGSAVKGIFLLNKNLPPQTVQVRP 478
Query: 646 SMLK---------FESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVKDESFEALQQEQL 705
SM+K F + N + VT + L++ +V LLS GV ++ F + L
Sbjct: 479 SMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLSKNLVALLSYGGVPNDFFLDILLNTL 538
Query: 706 RLLGRMLTDKVAALNVLENLNGADSDNILVRMLNHGY---EPNIEPYLSMMLQAHYWNLF 765
+ AA + D N L +M+ G EP ++ YLS +L+ L
Sbjct: 539 EKKKTIFFKVRAAGKAALHYGNMDDKNAL-QMIMAGIPLDEPYLKHYLSKLLK-----LE 598
Query: 766 SDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKAELQDRNQNHFHTIDETKSI 825
D ++ + + L+G +D TG L +V A+ QD
Sbjct: 599 KDDLKAGKLPIDESYYLMGTVDPTGELKEDEVSGL-----AKSQD--------------- 658
Query: 826 LLGRVVVTKNPCLHPGDVRVLEAIFHVELEE--KGLVDCLIFPQKGERPHTNECSGGDLD 885
V+V +NP LH GD+ +L+A + LE+ + FPQKG R +E +GGD D
Sbjct: 659 ----VLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFD 718
Query: 886 GDLYFISWDENLI-------PPKTEAPMD--YTGRRPRIMDHDVTLEEIQKFFV--DYMI 945
GD+YFIS + L+ P + +P YTGR+P + + EE+ K F+ +
Sbjct: 719 GDMYFISRNPKLLEHYKPSEPWVSSSPRSKIYTGRQPSELSPEQLEEELFKIFLKTGFSP 778
Query: 946 NDTLGAISTAHLVHADR---------EPKKALSSKCLELAMLHSMAVDFAKTGAPAEMPR 967
+ +G + + L DR + K + K L+L ++ A+D KTG +P
Sbjct: 779 SSVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAPKTGTEVNLPL 831
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038878920.1 | 0.0e+00 | 91.33 | RNA-dependent RNA polymerase 2 [Benincasa hispida] | [more] |
| XP_022134828.1 | 0.0e+00 | 90.84 | RNA-dependent RNA polymerase 2 [Momordica charantia] | [more] |
| XP_023516327.1 | 0.0e+00 | 90.64 | RNA-dependent RNA polymerase 2 [Cucurbita pepo subsp. pepo] | [more] |
| KAG6589458.1 | 0.0e+00 | 90.64 | RNA-dependent RNA polymerase 2, partial [Cucurbita argyrosperma subsp. sororia] ... | [more] |
| XP_022921679.1 | 0.0e+00 | 90.47 | RNA-dependent RNA polymerase 2 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| O82504 | 0.0e+00 | 60.67 | RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1 | [more] |
| Q7XM31 | 0.0e+00 | 51.85 | Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... | [more] |
| Q9LQV2 | 3.9e-218 | 40.37 | RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1 | [more] |
| Q0DXS3 | 9.0e-183 | 47.23 | Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... | [more] |
| Q9SG02 | 6.3e-152 | 36.72 | RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1C343 | 0.0e+00 | 90.84 | RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111007004 PE=3... | [more] |
| A0A6J1E171 | 0.0e+00 | 90.47 | RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111429858 PE=3 ... | [more] |
| A0A6J1JJ96 | 0.0e+00 | 90.38 | RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111485606 PE=3 SV... | [more] |
| A0A1S3BVE2 | 0.0e+00 | 90.18 | RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103493922 PE=3 SV=1 | [more] |
| E9NWK9 | 0.0e+00 | 89.91 | RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_1G005580 PE=2 SV=... | [more] |
