Spg022640 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022640
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LIM domain-containing protein WLIM1-like
Location	scaffold2: 5413775 .. 5416544 (+)
RNA-Seq Expression	Spg022640
Synteny	Spg022640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGAGCTGTAATCTCTGACTCAGAATTTTCAAAGACTCAGAAGGAAAATTGCTGAATTCTGAGACGACATAAAAAGGGCAAAGGAAAGATCTTCTGCTTCTTCTTTCCCTTCCTTCTTCTCTCAGCCTGATAGTTCAGTTCAGTTCTGTTCTGTTCAAATTCTTCTTTGAATCCTTCAGATTTTTGAAGATGGCGTTTTTAGGGACAACCCAGAAGTGCAAGGCCTGTGAGAAGACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAGTCTACCACAAGGCCTGTTTCAGGTGCCACCATTGCAAGAGCACTCTAAAGGTAACTCTTTGAATCTTCCTACACATGTATGATTCATTCTTGAAGGTTTCTTGGATGGGTCTTCCTTCAGATGTTTACAGTAAACTTGAAGATGAGAGGCTTGTTGATAGAGTTTGAAAGTGGGATGGAAGAGAATCCTTTTGATTTGTGTTTAGACAATTCAAACCATATAGACTTTGATATGGCTATTTCCAGATCCTATCCATGATACTCAGTATCTCAAACTGATATAAAATGATCATATTTCCCTTTCTATCTATAACTAATGCAAGCCCTTTTATGGACTGCTTCTAGTCTTGTTATTTTGGCTGAAGTTTTCCTGAAGTTCATTTCATGGTGTAATAGTTGAATGATTCCTATATCCCATAAGCATCTGATTCCACTTGGGTCTGTAAATTTATTCTTTCCCGGGTCGAAGCTTATCCGACAAGGAATTTTGCTACCTTAGATTATGTGTGTGTTAAGATTCTGCTTGTTGATGCACCAGGATCATAAATGGAGATTTGAAATATTAGTGGTTTTCTTGGTGCCCATAATATATTTTTTTTTTAAGTTCAATAACACGTGGGGTGAAAATTTGAATCTTCGACCTTCGAAGATATATGTCTTAACTAGTCGAGCTATATTTAGGTTGGCTTGGTGCCGGTAACTTGAAACATTTTCACCTGTACTGATTCTGTTTTTCCTGTCACTGCAGTTGTTCAATTACTCCTCTTTTGAAGGTGTATTGTATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTACTTGGCTGTTCAGTCTTTTTCTGCCTTCAATGGTGTCTGCTTGTTTAGTCTATTATTCTTTTTCGTTTCTTCTTTTTAGGTACTCCAAGAACAGTTAGAACAGACAGATCTACCAATCAGGTTTTTCATTGCTTAAACTTTTTTGGAAGTTTATCTGTAAAAATCAGTACTTATGATCTGATAAGTAACTATTTGATGTTGTTATTAACATATGAAACTTAAATTTGAAGGTCCAATCCAACAGCAAAGTGTCAAGTTTATTTGCTGGAACTCAAGACAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTAAATAGTTATTGTGAAGTTTAAAAGCCAGTAGTTCTTTACTTGCTTCAATGCCTATTTTATCAATCATTCACTCAAGTTGACATCACATTTACAACCTAAAACTCAAATAGTAAAAGGGTACAAAACTTTCCTAGTTTCTTGTTTCTGTTTTTCTTGAGAGAGGATCAAACTTTAAATGTAGCGTTACAGTTCAAGGAATTTCCAAATAACTAGATCCAACTTGAAACAGTATGACGAATTTGGAAGTTGCATATTGGGAAGGATAGTTGAATGTTGTCTTAGAATGGCTTTCTTTTCGTCCTTTCGTGTTTGCGTGCGAGAGAGAGGAGCGAGATCCTGATAGAGCCCACATAGAAAGATAAGAAGATTTCGATGATTCGCCGAGAGAAAGTATACAAGAGGCAGATAGTTTGAGAGGTCTGCACTCATCCCTAACTCACTAGACTACTGAAGTTCCTTTACAAGTTCACAAAAAAGACCCCACCAACACAGTTACTCCCTACTCTCCCTAACTGTACTAATTCACCTCCATCACTCTCTTTTTAGTGTAAGCCAAACTAATGAAAAGGCGCTTGATCCAATCAAGATCCCATAAACATAGATTTGTCTCCTTGATCTAAGACAATGTAATCTCTGAATCTCCTTTATGTGATTTGGGGTATTGTGCTCCTCAAGTTGCTAAAACCAGTTTCTTTTTTCCAATATAACAACATCCAGAAGTGGGGATTTGAAACTTTGCCCTTTTGGTCGATGATATAATGCCTTAACCAGTTGAGCGTTGTTCAGGTTAGCTCTAAAACTAAGTTGCTTTAACTTAAAACCTGCTGTTCTCTTTTTTCCTTCAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTATACTGCAGGCATCATCACAACCAGCTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGAGAACACACCAGCTGAATAAAATTTGCTGTCAGATGCAACTGTTATGCTGTGCATGAGGAGCTGATGAAGTTACAATTTTCTTCGATACTTCCGGTTCGGGTTTGCTATTCTATAGAGTGTACTATAAGAGAAAATTTGAGTTTCAATAAATTTTGAGTGTGAGCTGAAAATCTTACAAAAGTACTGCAGAAATATGAGATATATTGTTATTCCATTCAACTGAGACTATAAGCTGTTTTCATCTTTTTCATTAATGAGTTATTTGTTATATATGTGAAGTGACTG

mRNA sequence

ATGCCTGAGCTCCTGATAGTTCAGTTCAGTTCTGTTCTGTTCAAATTCTTCTTTGAATCCTTCAGATTTTTGAAGATGGCGTTTTTAGGGACAACCCAGAAGTGCAAGGCCTGTGAGAAGACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAGTCTACCACAAGGCCTGTTTCAGGTGCCACCATTGCAAGAGCACTCTAAAGTTGTTCAATTACTCCTCTTTTGAAGGTGTATTGTATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTACTCCAAGAACAGTTAGAACAGACAGATCTACCAATCAGGTCCAATCCAACAGCAAAGTGTCAAGTTTATTTGCTGGAACTCAAGACAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTATACTGCAGGCATCATCACAACCAGCTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGA

Coding sequence (CDS)

ATGCCTGAGCTCCTGATAGTTCAGTTCAGTTCTGTTCTGTTCAAATTCTTCTTTGAATCCTTCAGATTTTTGAAGATGGCGTTTTTAGGGACAACCCAGAAGTGCAAGGCCTGTGAGAAGACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAGTCTACCACAAGGCCTGTTTCAGGTGCCACCATTGCAAGAGCACTCTAAAGTTGTTCAATTACTCCTCTTTTGAAGGTGTATTGTATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTACTCCAAGAACAGTTAGAACAGACAGATCTACCAATCAGGTCCAATCCAACAGCAAAGTGTCAAGTTTATTTGCTGGAACTCAAGACAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTATACTGCAGGCATCATCACAACCAGCTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGA

Protein sequence

MPELLIVQFSSVLFKFFFESFRFLKMAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD

Homology

[Close]

BLAST of Spg022640 vs. NCBI nr
Match: KAG7023149.1 (LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.0 bits (1003), Expect = 6.6e-105
Identity = 191/206 (92.72%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 8   QFSSVLFKFFFESF----RFLKMAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCH 67
           QFS VLF F   S      FLKMAFLGTTQKCKAC+KTVYLVDQLTADNK+YHKACFRC+
Sbjct: 21  QFSLVLFCFCSYSSLNPKDFLKMAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCY 80

Query: 68  HCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKV 127
           HCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRT+RTDRSTNQVQSNSKV
Sbjct: 81  HCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKV 140

Query: 128 SSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCR 187
           SSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCR
Sbjct: 141 SSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCR 200

Query: 188 HHHNQLFKQKGNFSQLDKHEEIKGSD 210
           HHHNQLFKQKGNFSQLDKHEEIKGSD
Sbjct: 201 HHHNQLFKQKGNFSQLDKHEEIKGSD 226

[Close]

BLAST of Spg022640 vs. NCBI nr
Match: XP_038878600.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 389.0 bits (998), Expect = 2.5e-104
Identity = 183/186 (98.39%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 24  LKMAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 83
           +KMAFLGTTQKCKAC+KTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 84  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 143
           KPHFDQLFKMTGSLEKSFEGTPRT+RTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTLRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 120

Query: 144 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 203
           IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 204 EIKGSD 210
           EIKGSD
Sbjct: 181 EIKGSD 186

[Close]

BLAST of Spg022640 vs. NCBI nr
Match: XP_004138126.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN63605.1 hypothetical protein Csa_013738 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 2.8e-103
Identity = 181/186 (97.31%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 24  LKMAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 83
           +KMAFLGTTQKCKAC+KTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 84  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 143
           KPHFDQLFKMTGSLEKSFE TPRTVRTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 144 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 203
           IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 204 EIKGSD 210
           EIKGSD
Sbjct: 181 EIKGSD 186

[Close]

BLAST of Spg022640 vs. NCBI nr
Match: XP_008453121.1 (PREDICTED: LIM domain-containing protein WLIM1-like [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 6.2e-103
Identity = 181/186 (97.31%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 24  LKMAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 83
           +KMAFLGTTQKCKAC+KTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 84  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 143
           KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 144 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 203
           IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 204 EIKGSD 210
           EIK SD
Sbjct: 181 EIKVSD 186

[Close]

BLAST of Spg022640 vs. NCBI nr
Match: XP_022921693.1 (LIM domain-containing protein WLIM1-like [Cucurbita moschata] >XP_022988414.1 LIM domain-containing protein WLIM1-like [Cucurbita maxima] >XP_023516337.1 LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.4 bits (986), Expect = 6.2e-103
Identity = 180/184 (97.83%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           MAFLGTTQKCKAC+KTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYCKP
Sbjct: 1   MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 145
           HFDQLFKMTGSLEKSFEGTPRT+RTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE
Sbjct: 61  HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 120

Query: 146 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 205
           KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI
Sbjct: 121 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 180

Query: 206 KGSD 210
           KGSD
Sbjct: 181 KGSD 184

[Close]

BLAST of Spg022640 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 6.9e-73
Identity = 127/185 (68.65%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           MAF GTTQKC AC+KTVYLVD+LTADN+VYHKACFRCHHCK TLKL NY+SFEGVLYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRS-TNQVQSNSKVSSLFAGTQDKCVTCKKTVYPI 145
           HFDQ FK TGSLEKSFEGTP+  + DR    +  + +KVS++F GT++KCV C KTVYPI
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 146 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 205
           EKV+V+   YH++CF+C+HGGC ISPSNYIAHE +LYC+HHH QL K+KGN SQL+   E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 206 IKGSD 210
               D
Sbjct: 181 NAAKD 185

[Close]

BLAST of Spg022640 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.5e-70
Identity = 119/179 (66.48%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 27  AFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKPH 86
           +F GTTQKC  CEKTVYLVD+L A+ +VYHKACFRCHHC STLKL N++SF+GV+YC+ H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 87  FDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEK 146
           FDQLFK TGSLEKSF+GTP+       + + QS +++SS F GT+DKC  C K VYPIE+
Sbjct: 63  FDQLFKRTGSLEKSFDGTPKFKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIER 122

Query: 147 VAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 206
           V VD  +YHRACF+C HGGC ISPSNYIAHE RLYC+HHH QLFK+KGN+SQL+  E +
Sbjct: 123 VKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEETV 181

[Close]

BLAST of Spg022640 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-60
Identity = 109/182 (59.89%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           M+F GT QKC+ACEKTVY V+ L+AD   YHKACF+C HCKS L+L NYSS EGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 145
           HF+QLFK +GS  K+F+ +P    TD+ T ++ ++ S+++ +F+GTQDKC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 146 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 205
           EKV V+S+ YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 206 IK 207
           IK
Sbjct: 181 IK 181

[Close]

BLAST of Spg022640 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-60
Identity = 110/184 (59.78%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           M+F GT QKCKACEKTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 145
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 146 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 205
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 206 IKGS 209
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of Spg022640 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53
Identity = 94/174 (54.02%), Postives = 127/174 (72.99%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           M+F GT  KCKAC+KTVY++D LT +   YHK+CFRC HCK TL + NYSS +GVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 145
           HF+QLFK +G+  K+F+        D  T   ++ SK+SS F+GTQDKC TCKKTVYP+E
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLT---RTPSKLSSFFSGTQDKCATCKKTVYPLE 120

Query: 146 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQL 200
           KV ++ +SYH+ CFRC+H GC ++ S+Y +    LYC+ H NQLF +KG+++ +
Sbjct: 121 KVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]

BLAST of Spg022640 vs. ExPASy TrEMBL
Match: A0A0A0LNY7 (Pollen-specific protein SF3 OS=Cucumis sativus OX=3659 GN=Csa_1G005660 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 181/186 (97.31%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 24  LKMAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 83
           +KMAFLGTTQKCKAC+KTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 84  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 143
           KPHFDQLFKMTGSLEKSFE TPRTVRTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 144 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 203
           IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 204 EIKGSD 210
           EIKGSD
Sbjct: 181 EIKGSD 186

[Close]

BLAST of Spg022640 vs. ExPASy TrEMBL
Match: A0A6J1JLG7 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111485663 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103
Identity = 180/184 (97.83%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           MAFLGTTQKCKAC+KTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYCKP
Sbjct: 1   MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 145
           HFDQLFKMTGSLEKSFEGTPRT+RTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE
Sbjct: 61  HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 120

Query: 146 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 205
           KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI
Sbjct: 121 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 180

Query: 206 KGSD 210
           KGSD
Sbjct: 181 KGSD 184

[Close]

BLAST of Spg022640 vs. ExPASy TrEMBL
Match: A0A6J1E4K3 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111429864 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103
Identity = 180/184 (97.83%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           MAFLGTTQKCKAC+KTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYCKP
Sbjct: 1   MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 145
           HFDQLFKMTGSLEKSFEGTPRT+RTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE
Sbjct: 61  HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 120

Query: 146 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 205
           KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI
Sbjct: 121 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 180

Query: 206 KGSD 210
           KGSD
Sbjct: 181 KGSD 184

[Close]

BLAST of Spg022640 vs. ExPASy TrEMBL
Match: A0A1S3BVF2 (LIM domain-containing protein WLIM1-like OS=Cucumis melo OX=3656 GN=LOC103493931 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103
Identity = 181/186 (97.31%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 24  LKMAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 83
           +KMAFLGTTQKCKAC+KTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 84  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 143
           KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 144 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 203
           IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 204 EIKGSD 210
           EIK SD
Sbjct: 181 EIKVSD 186

[Close]

BLAST of Spg022640 vs. ExPASy TrEMBL
Match: A0A6J1BZ78 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111006836 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.0e-100
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 24  LKMAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 83
           +KMAF GTTQKCKAC+KTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFSGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 84  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 143
           KPHFDQLFKMTGSLEKSFEGTPRT+RTDRSTNQVQ+NSKVSSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQTNSKVSSLFAGTQDKCVTCKKTVYP 120

Query: 144 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 203
           IEKVAVDSKSYHR+CFRCSHGGCVISPSNYIAHE RLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRSCFRCSHGGCVISPSNYIAHESRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 204 EI 206
           EI
Sbjct: 181 EI 182

[Close]

BLAST of Spg022640 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 275.0 bits (702), Expect = 4.9e-74
Identity = 127/185 (68.65%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           MAF GTTQKC AC+KTVYLVD+LTADN+VYHKACFRCHHCK TLKL NY+SFEGVLYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRS-TNQVQSNSKVSSLFAGTQDKCVTCKKTVYPI 145
           HFDQ FK TGSLEKSFEGTP+  + DR    +  + +KVS++F GT++KCV C KTVYPI
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 146 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 205
           EKV+V+   YH++CF+C+HGGC ISPSNYIAHE +LYC+HHH QL K+KGN SQL+   E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 206 IKGSD 210
               D
Sbjct: 181 NAAKD 185

[Close]

BLAST of Spg022640 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-61
Identity = 109/182 (59.89%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           M+F GT QKC+ACEKTVY V+ L+AD   YHKACF+C HCKS L+L NYSS EGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 145
           HF+QLFK +GS  K+F+ +P    TD+ T ++ ++ S+++ +F+GTQDKC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 146 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 205
           EKV V+S+ YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 206 IK 207
           IK
Sbjct: 181 IK 181

[Close]

BLAST of Spg022640 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-61
Identity = 110/184 (59.78%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           M+F GT QKCKACEKTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 145
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 146 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 205
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 206 IKGS 209
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of Spg022640 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-61
Identity = 110/184 (59.78%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           M+F GT QKCKACEKTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 145
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 146 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 205
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 206 IKGS 209
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of Spg022640 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-61
Identity = 110/184 (59.78%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 26  MAFLGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKP 85
           M+F GT QKCKACEKTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 86  HFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 145
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 146 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 205
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 206 IKGS 209
           IK S
Sbjct: 181 IKRS 182

The following BLAST results are available for this feature:

BLAST of Spg022640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023149.1	6.6e-105	92.72	LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_038878600.1	2.5e-104	98.39	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]
XP_004138126.1	2.8e-103	97.31	LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN63605.1 hypothetical p...	[more]
XP_008453121.1	6.2e-103	97.31	PREDICTED: LIM domain-containing protein WLIM1-like [Cucumis melo]	[more]
XP_022921693.1	6.2e-103	97.83	LIM domain-containing protein WLIM1-like [Cucurbita moschata] >XP_022988414.1 LI...	[more]

BLAST of Spg022640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	6.9e-73	68.65	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	5.5e-70	66.48	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	3.0e-60	59.89	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	3.0e-60	59.78	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O80839	1.6e-53	54.02	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of Spg022640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNY7	1.3e-103	97.31	Pollen-specific protein SF3 OS=Cucumis sativus OX=3659 GN=Csa_1G005660 PE=4 SV=1	[more]
A0A6J1JLG7	3.0e-103	97.83	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1E4K3	3.0e-103	97.83	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3BVF2	3.0e-103	97.31	LIM domain-containing protein WLIM1-like OS=Cucumis melo OX=3656 GN=LOC103493931...	[more]
A0A6J1BZ78	4.0e-100	96.15	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Spg022640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	4.9e-74	68.65	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	2.1e-61	59.89	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	2.1e-61	59.78	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	2.1e-61	59.78	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	2.1e-61	59.78	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 34..86 e-value: 5.4E-12 score: 55.9 coord: 133..185 e-value: 1.0E-11 score: 55.0
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 134..189 e-value: 4.0E-10 score: 39.8 coord: 35..89 e-value: 2.0E-10 score: 40.7
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 35..69
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 132..192 score: 12.0484
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 33..93 score: 13.1473
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 128..198 e-value: 2.2E-18 score: 68.2 coord: 30..99 e-value: 2.0E-19 score: 71.5
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 27..206
None	No IPR available	PANTHER	PTHR24206:SF63	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 27..206
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 31..92 e-value: 2.2409E-38 score: 125.27
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 134..194 e-value: 9.50626E-37 score: 121.038
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 61..101
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 27..60
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 126..159
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 160..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022640.1	Spg022640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding