Spg022626 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022626
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic-like
Location	scaffold2: 10565313 .. 10570195 (-)
RNA-Seq Expression	Spg022626
Synteny	Spg022626

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCCGGTTCATCAATGGCTGAAAGGCCACCAAACTTTTCGCCTTCAACCTTTCTTCTCTGCAAGTTCGATCAATTCCACCATTAATTTCCAGAGTTACACACCTTGATTTCAACTTCAACAACCTTCCAATTGCCACTTTCCCTCTCAATCAGCCATGGAGATCGCGAGAATTGCTTCCACTCATCTAATTCACTTCCCAACCACATTCGACAGGCCCCGCAGCGTCGTCTGGAATCGGAATCCGCCGCTGAGATTGAGATCCTCTTTCAATTTAAAGGCGGCGACGAACCGAAATGAGTGGAGGAAGTGCGAAGCTATGGCGTCCGATTTCGTCGCTACAGAACAACCGGAGGAATCGGCGGCGGCGGCGGAGGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTGATGCCGGTGTGCGATTTGGACAAGAGAGTGCCGATTGCGAAGAAGGTGATGGGGCTGGATTTGGTGGTGTGGTGGGACAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCTCATAGATTGGCGCCCTTGTCCGAGGGGAGGATCGATCAGTGGGGAAGATTGCAGTGTGTTTACCATGGATGGTGCTTCAATGGCTCCGGCGACTGCAAATTCATCCCTCAAGCTCCCGCCGATGGCCCTCCGGTAATAATTTTAGTCCATTTTACTCCGTATACCTTTGAAAAGTTTGTTTTGGTGTTTTGGTCCTTTGTTTTCATTTTTTTCTCATTCTTTTTGTAATTACAATTTCAGCACAATATTACATACGCTGTAAACTTCTTGTAACAGTATCATAGCTTTATATGGGGAGCTAAAAAAAGAAAGAAAGAAAGTATAAGGGTCTTATATTATAGGATTTCTATATAAAGTTTAAGTTCGAATTTTCAAACAAGAGACAAAAATGATATGCTTTTAGAACCATAGAAATCAAAATAGATGTTTCAGAAATAAAGTGGTTAAAATGGACCAAAGCTGAAAGTATTCTTTTCTTTTGTTTCATCTCTTTGGTTACTGTGTGGAGTAAGGCTGTTTTCCTATGGTCATAATTCTTTTAGTTTATATTGAATTTTATATTTAGAGCCTTTCTAATTATTTTATTATCATTTTTTCCACTCAAATATTTTGTTTTGATTCTGAAGGTTTATATAAAAATGTGCTTTGATAGTCGTGGATGAATTTTTGTATTGTGTTCAATATATATCTTATATGACATCATATAAACTTGTGATCTAAGCAACAAATGTCTAGTTTTTGGTATCAAATTTAATTTTAGGTGAACTGAGATTTAAAAATAAAACAAAAAACCAAATGACAATTGACAAATTTAGGCTATCAAAATGATTAAAAGAAAAACCAGGTTGAATATATATATTAAAATAGTTAAATTTATTTTAATCCATCCGTGTGATAGAATAGGTAATTTAATAGTTTGTCCGACAACTCTATAATTGAAATTGTGTACAAAGTATAAAGAGATATATAAACAATGATGGATCTAGAATTTTATTTTATCATTCACCAACTTTAGCGTAACTTGGTTGTTAAAACATCTCTACCTTTTTTTCAAAAAAAAAAAAAAACATCTCTACCTTTTCTAGAGAGTCTTTAGGATGAACTTTTACCATCATATTTATGGTTTTATATTTTCAAAAATGATATGTTTTAATATCTTTCAAAAATAATAATATCGAAGGCTGAAATTAGAAATCTTATGAACATTTACTCCAATTGGTAAAACATGCAGGTCCACTCATCCAAGAAGGCATGCGTTGCTGTATATCCAAGCACAGTGCAGAATGGCATAGTGTGGTTCTGGCCAAACTCGGATCCCAAATTCAAAGATATCATTTTGGAGAAGAAACCTCCCTTTATTCCCGAGCTGGACGACCCATCTTATGTTAAGTTAGAGGGAAATAGAGATATGGCCTACGGGTAATCACTTCGAAGCCTCTTTCTGTCACACATTCTTATGTATCTTTTTGAGGTAATATATGCTCATTCCAGTGTCTGAATTAAGGAAATAACTGTCTATAGATAAATGGATTGAATTTGCATTGTCATGGATATTCAGACCTCGTTTTGTAAAAGATAGTTAACGTACCTCATAAGACCAAACGGAAGTTCGACTGAAAACTAGATTGTACACAAGGAGGGTGTTCTGTTTCTGCATGATTGTTGACGAGGTTAGCCACTAGATAATTTTTTGGATGAGATTGTGAAAGAAGAAATAGGTGTTGACAATATTTAATTCATATCATTCATTTAAACTTTCAAGTATAGTGATGATTTAATATTATATCGAAATGGTAAATCATGTGTTTAAACTCATACAATGTCATTTCTTGCCCCATGCTAGTAGTGATATCCTAATCTTGTTTACTTCGTCCAAATTTGGCTTTTTCAGGTATGAGATACTAATCGAAAATCTGATGGACCCTGCTCATGTACCATATGCTCACTACAGGATAATTCAAGCCCCACCAGCATTTAAAAACAGATATCTTTGCCAATTCTATCTTCTCAACTCTTACGTTTGAGGCTCTCGCCTGGATTGCTTTGACTAACAAAGACCATGTGTTCATGCACAGTGAACGCTGATAGGGAAGGTGGTAGACCACTCGAATTGATGGTAGAAAAGTTGAAAGCAAATGGTTACGTTGGCAAACATGATAGGCTCCGTCACAAGTTTATGGCACCTTGTGTCTATTACTTTTTCTCTGATCCGGAGTTGGTTCAAGGAAATGTAGAGAGAAAGAGTGATGAATCTGAACCGTCAGTTGCAAATGTGAAGGTATATTAGGAGAAACTTTTAGGTACTTCCAGTGCAATAAGACCCGTAGTTTTGCACCGTTGGATGTAAGAGAAATGGCAAAAGTACCTCGATTTTATATCCAACGGTTATTAGGAACAGACAAATTTGAAGATTTACGTCCGACAGTTTTAAAAAGGGACCTCATTGTACCGGGAACACCTAATAATTTTCTACGAAGAAATTTTTAGGTACTCCCAGTGCAATGAGACCTATAGTTCCATGTCTTTCATTGCATTGAGTTGATAATCCAAACCTGACTCTTGAACTACTTATGTCTTTGTATATTCTTTCATTTCATTTGGTCCCTTACCAAAAAAAAATAAAGAAGAGAGGGAAAAAAGAACTCTTTAACTGCAATTTCTTGTTTTTTGCTTGTGATGATTTCTAATTCGTGAAAATTTTTGTTGGTTCAGAAACAGTCAACGAAAATCTCACAACGAAGATCATTTCTCGTTTTCTTCTGCATCCCAGTTAGTCCAGGTAAAAGCAGATTGATATGGGCCTTCCCTAGGAACTTTGGGAAATGGATAAACTATATTGTTCCACGATGGATGTTTCATATTGGACAGAATTTGGTTCTAGATTCAGATATGTATTTTCTTCGTGTCGAGGTAGGAAATTTTGTTCGCGGATAACGTTTTCATGTGTCGAGATTACGGTTCCTAATGATGTTTGTTATGAATCTAGGAGCATAAATTAATGGAAATAGGCCCTTCCAATTGGCATAAAGCTTGTTATATGCCTGTAAAATCAGATGCTTTGGTGGTTGGATTTAGAAGATGGTTGAACAAATATGCAGGTGGTCAAGTTGATTGGGGAGGCAAATATTCTGGCTCCCTTCCTCCACTGCCGCCTAGAGAGCAGGTGTTTGAAAGGTATCCTGTCATTTCTGAAACTCAACTTCCCTACTATGCTCAGAAACAAAAATATGAAGCAACCACATTGGATATAGATTCAAAAATCTGTATGTTCCCTAATAATTGTTCGATGTAGTTTTGAAATATTTTTGCAGTTTCTCTCCCATACATCCAACGGTGAAAAATGTTAGCTACATTGTGGTAGTTTCCTCTAGTGATTTCTCTCCTGAAAGATATCGGTTCCTTTTAGGCGTGTAAGCATGGAACAAACCTATTGGTTTAATTCAACTTTTGACCATAACTAATTTTGACCTAGCATCAATAAAACCATTAGTTTCCAAGTAAAAAAAAACATTTACATACAAATATGTTACTGAATTTTTTGTTTAGCACGAAATTATCTTTTGAAAACCATTTCCATGTGAGCTCTAGGTAACTTTATACCCTTTTTCTGTTAATTTTTTAAAACGATATATGAAACTTAGTGGAGAGAAGAGAGAAAAATGTCGGAATAGATACATAATTTTTGTATCTTATAAGCTCATAAATAAAAACAACATTTTCATTAGTCGGAAGCTTTTTAGTTAGAATCTAAAAACAAAACCATACAAATTCTAGATCTTAAGTAGACAATATTTAGGAAGAAATAAGATCGTTTTTCGTATTTTGTTAATGATTTTCAGGTACTGGAGTCATGTGGTGAATTGCAGCAGCTGCAATGCTGCATATAAAGCTCTGAACATAGCTGAGGTGGCTCTGCAGGTAATCTCCATTGCTGCAATTGGAGCTGTGGCATTGACAAAGCAGGGTGTAATTTCAGCAGCAGCTAAGGCCACCATTGTCACCATTGCAATACTCTGTTTTGCTGCTTCAAAGTGGCTGTCCCATTTTGTTCACAAAACTTTCCACTTCCAAGACTACAATCATGCCCTGGTTTGACACTTTTCCTCCTATTTTTGTGCCTTTTTAAATGGTAGAACTCAATTTTAATTTATAGTTCCTCAAAAGCTTGTACATATCAAAATTGCATTTGAGAAAACCCCCAAGTTTGGGGCTTTCTTTTTTAATAAAAATATATGTTGTATTTTTAGAAATTTCTTAGTTTGGAAATGTATTTAGTTTCTAGGGTTGTATGGATGAAATTTTCGTCGGAAAAATATTTTCTTTTTTCTTTTAGTTCAACCGGTAGGGGTGGC

mRNA sequence

ATGGAGATCGCGAGAATTGCTTCCACTCATCTAATTCACTTCCCAACCACATTCGACAGGCCCCGCAGCGTCGTCTGGAATCGGAATCCGCCGCTGAGATTGAGATCCTCTTTCAATTTAAAGGCGGCGACGAACCGAAATGAGTGGAGGAAGTGCGAAGCTATGGCGTCCGATTTCGTCGCTACAGAACAACCGGAGGAATCGGCGGCGGCGGCGGAGGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTGATGCCGGTGTGCGATTTGGACAAGAGAGTGCCGATTGCGAAGAAGGTGATGGGGCTGGATTTGGTGGTGTGGTGGGACAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCTCATAGATTGGCGCCCTTGTCCGAGGGGAGGATCGATCAGTGGGGAAGATTGCAGTGTGTTTACCATGGATGGTGCTTCAATGGCTCCGGCGACTGCAAATTCATCCCTCAAGCTCCCGCCGATGGCCCTCCGGTCCACTCATCCAAGAAGGCATGCGTTGCTGTATATCCAAGCACAGTGCAGAATGGCATAGTGTGGTTCTGGCCAAACTCGGATCCCAAATTCAAAGATATCATTTTGGAGAAGAAACCTCCCTTTATTCCCGAGCTGGACGACCCATCTTATGTTAAGTTAGAGGGAAATAGAGATATGGCCTACGGGTAA

Coding sequence (CDS)

ATGGAGATCGCGAGAATTGCTTCCACTCATCTAATTCACTTCCCAACCACATTCGACAGGCCCCGCAGCGTCGTCTGGAATCGGAATCCGCCGCTGAGATTGAGATCCTCTTTCAATTTAAAGGCGGCGACGAACCGAAATGAGTGGAGGAAGTGCGAAGCTATGGCGTCCGATTTCGTCGCTACAGAACAACCGGAGGAATCGGCGGCGGCGGCGGAGGAGAAGTTCGATTGGTTTGCGGAGTGGTATCCGGTGATGCCGGTGTGCGATTTGGACAAGAGAGTGCCGATTGCGAAGAAGGTGATGGGGCTGGATTTGGTGGTGTGGTGGGACAGGAATGAGAATGCGTGGAAGGTGTTTGATGATAGTTGTCCTCATAGATTGGCGCCCTTGTCCGAGGGGAGGATCGATCAGTGGGGAAGATTGCAGTGTGTTTACCATGGATGGTGCTTCAATGGCTCCGGCGACTGCAAATTCATCCCTCAAGCTCCCGCCGATGGCCCTCCGGTCCACTCATCCAAGAAGGCATGCGTTGCTGTATATCCAAGCACAGTGCAGAATGGCATAGTGTGGTTCTGGCCAAACTCGGATCCCAAATTCAAAGATATCATTTTGGAGAAGAAACCTCCCTTTATTCCCGAGCTGGACGACCCATCTTATGTTAAGTTAGAGGGAAATAGAGATATGGCCTACGGGTAA

Protein sequence

MEIARIASTHLIHFPTTFDRPRSVVWNRNPPLRLRSSFNLKAATNRNEWRKCEAMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHSSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYG

Homology

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BLAST of Spg022626 vs. NCBI nr
Match: XP_038880155.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 421.0 bits (1081), Expect = 6.6e-114
Identity = 199/241 (82.57%), Postives = 207/241 (85.89%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDR-----PRSVVWNRNPPLRLRSSFNLKAATNRNEWRKCE-- 60
           ME+ARI+S  LIH  TT ++     P  V  NRNP  RLRSSFN K  T+RN  RKCE  
Sbjct: 1   MEVARISSPRLIHISTTLNKSLTRNPYYVASNRNPLPRLRSSFNFKTTTHRNVLRKCELL 60

Query: 61  --AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWD 120
             AMASD V TEQPE      EEKFDWFAEWYPVMP+CDLDKRVPIAKKV+GLDLVVWWD
Sbjct: 61  RTAMASDVVTTEQPE----MEEEKFDWFAEWYPVMPLCDLDKRVPIAKKVLGLDLVVWWD 120

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVH
Sbjct: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 180

Query: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 233
           SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDII+EKKPPFIPELDDPSYVKLEGNRDMAY
Sbjct: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAY 237

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BLAST of Spg022626 vs. NCBI nr
Match: TYK09957.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa])

HSP 1 Score: 420.6 bits (1080), Expect = 8.6e-114
Identity = 195/241 (80.91%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDR-----PRSVVWNRNPPLRLRSSFNLKAATNRNEWRKCE-- 60
           ME+ARI+S HLIH PTTF+R     P S+  NRNPP R RS  + K AT+RN  RKCE  
Sbjct: 480 MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRSFSSFKTATHRNAIRKCELI 539

Query: 61  --AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWD 120
             AMASD V +E+PE      EEKFDWFAEWYPVMPVCDLDKRVP+ KKV+GLDLVVWWD
Sbjct: 540 RTAMASDVVTSERPE----VEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWD 599

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVH
Sbjct: 600 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 659

Query: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 233
           SSKKACVA+YP+TVQN I+WFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY
Sbjct: 660 SSKKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 716

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BLAST of Spg022626 vs. NCBI nr
Match: XP_016900972.1 (PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 8.6e-114
Identity = 195/241 (80.91%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDR-----PRSVVWNRNPPLRLRSSFNLKAATNRNEWRKCE-- 60
           ME+ARI+S HLIH PTTF+R     P S+  NRNPP R RS  + K AT+RN  RKCE  
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRSFSSFKTATHRNAIRKCELI 60

Query: 61  --AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWD 120
             AMASD V +E+PE      EEKFDWFAEWYPVMPVCDLDKRVP+ KKV+GLDLVVWWD
Sbjct: 61  RTAMASDVVTSERPE----VEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWD 120

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVH
Sbjct: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 180

Query: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 233
           SSKKACVA+YP+TVQN I+WFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY
Sbjct: 181 SSKKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 237

[Close]

BLAST of Spg022626 vs. NCBI nr
Match: KAA0055705.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa])

HSP 1 Score: 418.7 bits (1075), Expect = 3.3e-113
Identity = 194/241 (80.50%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDR-----PRSVVWNRNPPLRLRSSFNLKAATNRNEWRKCE-- 60
           ME+ARI+S HLIH PTTF+R     P S+  NRNPP R RS  + K AT+RN  RKCE  
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRSFSSFKTATHRNAIRKCELI 60

Query: 61  --AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWD 120
             AMASD V +E+PE      EEKFDWFAEWYPVMPVCDLDKRVP+ KKV+GLDLVVWWD
Sbjct: 61  RTAMASDVVTSERPE----VEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWD 120

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSG+CKFIPQAP DGPPVH
Sbjct: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGNCKFIPQAPPDGPPVH 180

Query: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 233
           SSKKACVA+YP+TVQN I+WFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY
Sbjct: 181 SSKKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 237

[Close]

BLAST of Spg022626 vs. NCBI nr
Match: XP_022961138.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 409.5 bits (1051), Expect = 2.0e-110
Identity = 195/242 (80.58%), Postives = 206/242 (85.12%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDRPRS-----VVWNRNPPLRLR-SSFNLKAATNRNEWRKCE- 60
           ME+A I+S  LIHFPTT  R  +     V  +RNP  RLR SSFN K  T+RN  RKCE 
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60

Query: 61  ---AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWW 120
              A+ASD V T+QPE      +EKFDWFAEWYPVM VCDLDKRVPIAKKV+GLDLVVWW
Sbjct: 61  IRTALASDVVGTDQPE--MEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWW 120

Query: 121 DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPV 180
           DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPV
Sbjct: 121 DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPV 180

Query: 181 HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMA 233
           HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKD+I+EKKPPFIPELDDPSYVKLEGNRDMA
Sbjct: 181 HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMA 240

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BLAST of Spg022626 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.8e-83
Identity = 132/180 (73.33%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 56  ASDFVATEQPEESAAAAE---EKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDR 115
           +S   +T  P E  A  E   +KFDW+A WYPVMP+CDLDK+VP  KKVMG+DLVVWWDR
Sbjct: 56  SSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDR 115

Query: 116 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHS 175
           NE  WKV DD+CPHRLAPLS+GRIDQWGRLQCVYHGWCFNGSGDCK IPQAP DGPPVH+
Sbjct: 116 NEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHT 175

Query: 176 SKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYG 233
            K+ACVAVYPSTVQ+ I+WFWPNSDPK+K+II   KPP+IPEL+DPS+ KL GNRD+ YG
Sbjct: 176 FKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYG 235

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BLAST of Spg022626 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39
Identity = 80/175 (45.71%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 61  ATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDRNENAWKVF 120
           A  + E S ++A+EKF W   WYPV  V DLD  VP   +++  DLV+W D     W   
Sbjct: 61  APGETEPSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVAL 120

Query: 121 DDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHS--SKKACV 180
           DD CPHRLAPLSEGRID+ G LQC YHGW F+GSG C  IPQA  +GP   +  S KAC 
Sbjct: 121 DDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACA 180

Query: 181 AVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIP-ELDDPSYVKLEGNRDMAYG 233
             +P+ V  G+++ WP+ +   K      KPP +P E +DP++  +   RD+ YG
Sbjct: 181 IKFPTLVSQGLLFVWPDENGWEK--ATATKPPMLPKEFEDPAFSTVTIQRDLYYG 233

[Close]

BLAST of Spg022626 vs. ExPASy Swiss-Prot
Match: Q9FYC2 (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 8.0e-38
Identity = 79/183 (43.17%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 57  SDFVATEQPEESAAAAEE----KFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDR 116
           SD    ++ EE     +E    +F W   WYPV  V DLD  VP   +++G DLV+W+DR
Sbjct: 59  SDSTEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDR 118

Query: 117 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHS 176
           N+  W  FDD CPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP   +
Sbjct: 119 NDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARA 178

Query: 177 --SKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIP-ELDDPSYVKLEGNRDM 233
             S +AC   +P+ V  G+++ WP  D    D     +PP +P + D P +  +   RD+
Sbjct: 179 VKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDL 238

[Close]

BLAST of Spg022626 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.6e-24
Identity = 72/228 (31.58%), Postives = 106/228 (46.49%), Query Frame = 0


Query: 37  SFNLKAATNRNEWRKCEAMASD---------------FVATEQPEESAAAAE-EKFDWFA 96
           SFN   ++ R +   C A A+D                V     +E     E   +DW  
Sbjct: 42  SFNKALSSRRRKQAWCVAAAADVKDATLLDGEEDQKVLVGPSSEQERKGEREVADYDWTE 101

Query: 97  EWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEGRIDQWG 156
           EWYP+    ++    P+  KV   ++V++ D N+  ++ ++D CPHRLA LSEG++   G
Sbjct: 102 EWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQ-FQCYEDRCPHRLAKLSEGQLID-G 161

Query: 157 RLQCVYHGWCFNGSGDCKFIPQAPADGPPVHSSKKACVAVYPSTVQNGIVWFW------P 216
           RL+C+YHGW F G G C  IPQ PAD       K ACV  Y      G++W W      P
Sbjct: 162 RLECLYHGWQFEGEGKCVKIPQLPAD---AKIPKSACVKTYEVRDSQGVLWVWMSRKTPP 221

Query: 217 N----------SDPKFKDIILEKKPPF-----IPELDDPSYVKLEGNR 228
           N          + P F+DI    + P+     +  L DP++V +  +R
Sbjct: 222 NVSKIPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHVPISHDR 264

[Close]

BLAST of Spg022626 vs. ExPASy Swiss-Prot
Match: Q9SK50 (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23
Identity = 63/184 (34.24%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 65  PEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDRNENAWKVFDDSC 124
           PEE        +DW  EWYP+    ++ +  P+   V    +V++ D  E   + ++D C
Sbjct: 71  PEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRC 130

Query: 125 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHSSKKACVAVYPST 184
           PHRLA LSEG++   GRL+C+YHGW F G G C  IPQ PA        K ACV  Y   
Sbjct: 131 PHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKAACVKTYEVK 190

Query: 185 VQNGIVWFW------PNSD----------PKFKDIILEKKPPF-----IPELDDPSYVKL 228
              G+VW W      PN +          P F DI    + P+     +  L DP++V +
Sbjct: 191 DSQGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPI 249

[Close]

BLAST of Spg022626 vs. ExPASy TrEMBL
Match: A0A5D3CD90 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00860 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.2e-114
Identity = 195/241 (80.91%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDR-----PRSVVWNRNPPLRLRSSFNLKAATNRNEWRKCE-- 60
           ME+ARI+S HLIH PTTF+R     P S+  NRNPP R RS  + K AT+RN  RKCE  
Sbjct: 480 MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRSFSSFKTATHRNAIRKCELI 539

Query: 61  --AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWD 120
             AMASD V +E+PE      EEKFDWFAEWYPVMPVCDLDKRVP+ KKV+GLDLVVWWD
Sbjct: 540 RTAMASDVVTSERPE----VEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWD 599

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVH
Sbjct: 600 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 659

Query: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 233
           SSKKACVA+YP+TVQN I+WFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY
Sbjct: 660 SSKKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 716

[Close]

BLAST of Spg022626 vs. ExPASy TrEMBL
Match: A0A1S4DYB5 (LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492541 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.2e-114
Identity = 195/241 (80.91%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDR-----PRSVVWNRNPPLRLRSSFNLKAATNRNEWRKCE-- 60
           ME+ARI+S HLIH PTTF+R     P S+  NRNPP R RS  + K AT+RN  RKCE  
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRSFSSFKTATHRNAIRKCELI 60

Query: 61  --AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWD 120
             AMASD V +E+PE      EEKFDWFAEWYPVMPVCDLDKRVP+ KKV+GLDLVVWWD
Sbjct: 61  RTAMASDVVTSERPE----VEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWD 120

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPVH
Sbjct: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVH 180

Query: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 233
           SSKKACVA+YP+TVQN I+WFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY
Sbjct: 181 SSKKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 237

[Close]

BLAST of Spg022626 vs. ExPASy TrEMBL
Match: A0A5A7UQ27 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00870 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.6e-113
Identity = 194/241 (80.50%), Postives = 208/241 (86.31%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDR-----PRSVVWNRNPPLRLRSSFNLKAATNRNEWRKCE-- 60
           ME+ARI+S HLIH PTTF+R     P S+  NRNPP R RS  + K AT+RN  RKCE  
Sbjct: 1   MEVARISSPHLIHIPTTFNRTLTPNPSSIASNRNPPPRSRSFSSFKTATHRNAIRKCELI 60

Query: 61  --AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWD 120
             AMASD V +E+PE      EEKFDWFAEWYPVMPVCDLDKRVP+ KKV+GLDLVVWWD
Sbjct: 61  RTAMASDVVTSERPE----VEEEKFDWFAEWYPVMPVCDLDKRVPVGKKVLGLDLVVWWD 120

Query: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVH 180
           RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSG+CKFIPQAP DGPPVH
Sbjct: 121 RNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGNCKFIPQAPPDGPPVH 180

Query: 181 SSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 233
           SSKKACVA+YP+TVQN I+WFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY
Sbjct: 181 SSKKACVAIYPTTVQNDILWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAY 237

[Close]

BLAST of Spg022626 vs. ExPASy TrEMBL
Match: A0A6J1HD38 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461739 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 9.6e-111
Identity = 195/242 (80.58%), Postives = 206/242 (85.12%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDRPRS-----VVWNRNPPLRLR-SSFNLKAATNRNEWRKCE- 60
           ME+A I+S  LIHFPTT  R  +     V  +RNP  RLR SSFN K  T+RN  RKCE 
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60

Query: 61  ---AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWW 120
              A+ASD V T+QPE      +EKFDWFAEWYPVM VCDLDKRVPIAKKV+GLDLVVWW
Sbjct: 61  IRTALASDVVGTDQPE--MEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWW 120

Query: 121 DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPV 180
           DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPV
Sbjct: 121 DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPV 180

Query: 181 HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMA 233
           HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKD+I+EKKPPFIPELDDPSYVKLEGNRDMA
Sbjct: 181 HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMA 240

[Close]

BLAST of Spg022626 vs. ExPASy TrEMBL
Match: A0A6J1HB02 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461739 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 9.6e-111
Identity = 195/242 (80.58%), Postives = 206/242 (85.12%), Query Frame = 0


Query: 1   MEIARIASTHLIHFPTTFDRPRS-----VVWNRNPPLRLR-SSFNLKAATNRNEWRKCE- 60
           ME+A I+S  LIHFPTT  R  +     V  +RNP  RLR SSFN K  T+RN  RKCE 
Sbjct: 1   MEVAGISSAQLIHFPTTLHRTLACNSCCVASHRNPLPRLRSSSFNFKTVTHRNVLRKCEL 60

Query: 61  ---AMASDFVATEQPEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWW 120
              A+ASD V T+QPE      +EKFDWFAEWYPVM VCDLDKRVPIAKKV+GLDLVVWW
Sbjct: 61  IRTALASDVVGTDQPE--MEEEKEKFDWFAEWYPVMQVCDLDKRVPIAKKVLGLDLVVWW 120

Query: 121 DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPV 180
           DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAP DGPPV
Sbjct: 121 DRNENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPV 180

Query: 181 HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMA 233
           HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKD+I+EKKPPFIPELDDPSYVKLEGNRDMA
Sbjct: 181 HSSKKACVAVYPSTVQNGIVWFWPNSDPKFKDVIMEKKPPFIPELDDPSYVKLEGNRDMA 240

[Close]

BLAST of Spg022626 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 308.9 bits (790), Expect = 3.4e-84
Identity = 132/180 (73.33%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 56  ASDFVATEQPEESAAAAE---EKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDR 115
           +S   +T  P E  A  E   +KFDW+A WYPVMP+CDLDK+VP  KKVMG+DLVVWWDR
Sbjct: 56  SSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDR 115

Query: 116 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHS 175
           NE  WKV DD+CPHRLAPLS+GRIDQWGRLQCVYHGWCFNGSGDCK IPQAP DGPPVH+
Sbjct: 116 NEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHT 175

Query: 176 SKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYG 233
            K+ACVAVYPSTVQ+ I+WFWPNSDPK+K+II   KPP+IPEL+DPS+ KL GNRD+ YG
Sbjct: 176 FKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYG 235

[Close]

BLAST of Spg022626 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 308.9 bits (790), Expect = 3.4e-84
Identity = 132/180 (73.33%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 56  ASDFVATEQPEESAAAAE---EKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDR 115
           +S   +T  P E  A  E   +KFDW+A WYPVMP+CDLDK+VP  KKVMG+DLVVWWDR
Sbjct: 56  SSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDR 115

Query: 116 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHS 175
           NE  WKV DD+CPHRLAPLS+GRIDQWGRLQCVYHGWCFNGSGDCK IPQAP DGPPVH+
Sbjct: 116 NEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHT 175

Query: 176 SKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIPELDDPSYVKLEGNRDMAYG 233
            K+ACVAVYPSTVQ+ I+WFWPNSDPK+K+II   KPP+IPEL+DPS+ KL GNRD+ YG
Sbjct: 176 FKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYG 235

[Close]

BLAST of Spg022626 vs. TAIR 10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 158.7 bits (400), Expect = 5.7e-39
Identity = 79/183 (43.17%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 57  SDFVATEQPEESAAAAEE----KFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDR 116
           SD    ++ EE     +E    +F W   WYPV  V DLD  VP   +++G DLV+W+DR
Sbjct: 59  SDSTEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDR 118

Query: 117 NENAWKVFDDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHS 176
           N+  W  FDD CPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP   +
Sbjct: 119 NDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARA 178

Query: 177 --SKKACVAVYPSTVQNGIVWFWPNSDPKFKDIILEKKPPFIP-ELDDPSYVKLEGNRDM 233
             S +AC   +P+ V  G+++ WP  D    D     +PP +P + D P +  +   RD+
Sbjct: 179 VKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDL 238

[Close]

BLAST of Spg022626 vs. TAIR 10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II )

HSP 1 Score: 110.5 bits (275), Expect = 1.8e-24
Identity = 63/184 (34.24%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 65  PEESAAAAEEKFDWFAEWYPVMPVCDLDKRVPIAKKVMGLDLVVWWDRNENAWKVFDDSC 124
           PEE        +DW  EWYP+    ++ +  P+   V    +V++ D  E   + ++D C
Sbjct: 71  PEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRC 130

Query: 125 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHSSKKACVAVYPST 184
           PHRLA LSEG++   GRL+C+YHGW F G G C  IPQ PA        K ACV  Y   
Sbjct: 131 PHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAS---AKIPKAACVKTYEVK 190

Query: 185 VQNGIVWFW------PNSD----------PKFKDIILEKKPPF-----IPELDDPSYVKL 228
              G+VW W      PN +          P F DI    + P+     +  L DP++V +
Sbjct: 191 DSQGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPI 249

[Close]

BLAST of Spg022626 vs. TAIR 10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13
Identity = 44/150 (29.33%), Postives = 61/150 (40.67%), Query Frame = 0


Query: 82  WYPVMPVCDL--DKRVPIAKKVMGLDLVVWWDRNENAWKVF----------DDSCPHRLA 141
           WYPV    DL  D  VPI             +  E  W +F           ++C HR  
Sbjct: 221 WYPVAFTADLKHDTMVPI-------------ECFEQPWVIFRGEDGKPGCVRNTCAHRAC 280

Query: 142 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPADGPPVHSSKKACVAVYPSTVQNGI 201
           PL  G +++ GR+QC YHGW ++  G+CK +P             K  +   P   Q G+
Sbjct: 281 PLDLGTVNE-GRIQCPYHGWEYSTDGECKKMPST--------KLLKVKIKSLPCLEQEGM 339

Query: 202 VWFWPNSDPKFKDIILEKKPPFIPELDDPS 220
           +W WP  +P           P +P L  PS
Sbjct: 341 IWIWPGDEP---------PAPILPSLQPPS 339

The following BLAST results are available for this feature:

BLAST of Spg022626 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880155.1	6.6e-114	82.57	protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benin...	[more]
TYK09957.1	8.6e-114	80.91	protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]	[more]
XP_016900972.1	8.6e-114	80.91	PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon compone...	[more]
KAA0055705.1	3.3e-113	80.50	protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]	[more]
XP_022961138.1	2.0e-110	80.58	protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor...	[more]

BLAST of Spg022626 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	4.8e-83	73.33	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
Q0DV66	1.1e-39	45.71	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9FYC2	8.0e-38	43.17	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]
O49931	8.6e-24	31.58	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]
Q9SK50	2.5e-23	34.24	Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1	[more]

BLAST of Spg022626 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CD90	4.2e-114	80.91	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A1S4DYB5	4.2e-114	80.91	LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chlo...	[more]
A0A5A7UQ27	1.6e-113	80.50	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A6J1HD38	9.6e-111	80.58	protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor...	[more]
A0A6J1HB02	9.6e-111	80.58	protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor...	[more]

BLAST of Spg022626 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.1	3.4e-84	73.33	ACD1-like	[more]
AT4G25650.2	3.4e-84	73.33	ACD1-like	[more]
AT3G44880.1	5.7e-39	43.17	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT2G24820.1	1.8e-24	34.24	translocon at the inner envelope membrane of chloroplasts 55-II	[more]
AT1G44446.1	4.1e-13	29.33	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 81..164 e-value: 8.9E-19 score: 67.2
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 82..192 score: 28.497503
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 77..220 e-value: 1.3E-37 score: 130.4
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 68..198
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 51..221
None	No IPR available	PANTHER	PTHR21266:SF32	NEVERLAND	coord: 51..221
None	No IPR available	CDD	cd03480	Rieske_RO_Alpha_PaO	coord: 75..203 e-value: 1.72635E-78 score: 230.287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022626.1	Spg022626.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding