Spg022537 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022537
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribosome biogenesis regulatory protein
Location	scaffold2: 6609272 .. 6613570 (+)
RNA-Seq Expression	Spg022537
Synteny	Spg022537

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACCCCTGGATGCCCGGTCCCACCTGGTTCAGCCTGAATCATCTCTGAACCCTACTCCTTCTCTTACTCTCTTCATTCATCTTTCTGACTTAAGCGTCGGAGGCGGTGTGGCAAGTACCACACCGATGTCTGTCACTTCTGTGTCTTGCAGGCACATCTTCCCCCTCCCAAACAAATTTACCACGTGAAGGTCAAGTGAGTTCTGCCTGTCCAGATTTGACCATCAACAATATATATAATCAACTAAACTAGGAACATACGAAAACAACCAACATAAGTTTAATTCAAGGGGTATAAATCTTAAACCAATTAACAAGAGATCTATGGTTCGAATTCTCCCATCTCTACATGTTGTCAAAAAACTAAACTACTAACTAGTTAAAAAAACTAAATGGTTGATAAAGCTTAATTACTTCTTTTTTTTTTTCTTCTAAAAAAATATTTTATGGTGCAACCAATATGGAGGTGTAATTTGAATTCCCAACCTCAAAATAAAAGTAAATGTCTAAATTGTCAAGTCACTTTTGTGTTGGTAGTCTAATAGAACCATTGACTCTTTAGATTTGCATCTATTTGGTCTTTAAACCTTAAAAAGTATCAAGGTTTTTGAACTTTCAATTTTGTGCCCTATAAGCTACTAAACTTTCAATTTTGTGTCCGGTAGATTTCTAACCTATTTATAAAATTAATTACACAAAAAATTAAAGGTTTAGAGTCGTGTTATACATAAAATTCAAATTTATATCTAATAATATGAGTTTTTTTTTTTTTTTTTATTTCAAATATATCAAAGGGTCAAAGACCTATTTAATACAAAATTAAAAATTTATGATTCTATTAAACACAAATTTAAAATTTGAGAGACTAAATAAACACAAACTTGTAAGCTCATAACTTATAAACTTGTAATTTATTATTATTTTTTCTACTATGAGTTCAAAATTAAGTTGTGCGGAGATTCAAACTTCTTTGGCATTTTGGCTCAATTTTTTATTTATAAATTATAATGTTATAGATGATAACAAATATAAATTAAATTAATATAAAAAAAACAAATAAAAATTAAATTAAATTCTCAAAAAAAAAAAAAAAGAATAAATCATTGGTACCCAGAATGGCCGTGGGAGCAAAATTAGGGCTTCATAAGGAACGTGAAAAAACAAAGCTAATGTGACGACGTCGTTTCATCCAAAAGCAACTTCGTTCTGATTGATCTTGTCCCACTCCTAAACCCCGAATCTTCTTCCTTCTTTGGTATTTTCTCTCTCGCCCGAGAAGTCTCTTGAATCGGCCGGAGATGGAGACCCAGCAGCAAGTTCAGGTCGACGTTGCCCATCTCATGGCCTTCAATCCTCACCACCAGTTCATCTCCCCGCCGCCCTCCAGGTTGGTCTCTTCTGCCTCCGACAATCTCTTCTCCAAGCACATACACTGGCTATAATTGCTACACGGATTTCGTTCGCGTTTTTCCAAACTTCCACCATCTGAATTCAATGGGGCTTTCTAGTATAGGAACCAGGGAAGTTTTTGGCTTTGAGGAACTATGATGTAACGAGCTATGCCTTGGAATACTGTTTATTTGATTATTATTCACTATACGTTTCAATGAATCATCGAAAACGTGTTATTAAGAAGAATTTGATTATTAGTGAGACTGTGATGTATTCAATATTGTTTGGTATAAGTAGATTATTTTGAACACATTGGCATGTACATACATATATATGTTATTTGAAGAGAATCTTTACTGCCTTTGCTTGTTACTTTTATAAATACAGGGAGGAGCTGGTGAATGAATGTCTACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCCCTAGTGAAGTTGCCTCCACCTAAAACAAGATTGCCGAGGGAGAAGCCTGTAAGCCCTTGAATATTTTTATATTTTCGTTTATCGTCTCATTGTGGCTTTTAAACTATGGATGTTTACATTTTTGGTTGATGTAATATCTCTCTTTCTTTCCAGCTTCCAAAGCCTAAGCCTCCTACAAAATGGAAACTTTTTGCGAAAAAACGAGGTTGGCCATTTTTTTTTGTTCTGCTTTCATCCTTTACTGTGTTGTTTTGTTTTGTATTAGAAGATTCATATTTCCAATCCTTCAGTTGTGGGACTTGAATTGAATTGAGCTGAAAGGCTGACTTGCTGTAAAGGAAAAAACTGAGAAAGAAAGAAACAAACAACTAACAAGAACAAAGAGAGGCATACTCCAGTCAAATACAAGACTCCGGAATTGGGAGTTTCCTGGGTAGGATTTAATTTTAGTACTTTTTTTGTTTTTTTGCAGGTATAAAGAACAGGAAAAAAGACAAGATTGTATATGACGAACAAACTCAAACATGGAAGCGCCGTCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATCATTGAAGCCAAGATGACTGATGGTATTGTTTAATATAACCAAAACTACTTTTCCATTCGTTGGTTATATGTTTGTTTATTTTCTTTCTTGATGTCAAAATTCTGAACGTGATTGTTTGACAGAGATAATTAGATTTAGAACATTGATCGATTACATTTTTTCTCTTATTCATTCTCAATTAACATAACTTCTTTGCATTTGCAGAGCCGGGGATGGATCCCTTTGCTGAGAGGCAAGCAAATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGCGCACAGAATCTGAAACAGGCTGCAAAAGTTGGTGCTTTACCAAGGTTTTACCCTCTTCTCACAGTTATTGGGTGTTGAACAAGTAATTAGATTATAACTCCTCTCTTTGCAGTCCTCCCTTTTCCTTCCCACTGTTTCAATTAAAGAATATCATATCATACTAATACGTACATTTGCGTAATTAAGATTTTTTGTAATAATTATTTGGTTTTTGGATTTTGATTTTTGAAAATTGTGTTTGTTTTCTCACCATTTCCTTACAATGGCTTTCAACTTTCTTAAGGAAACATTGAATCCTTGGCTAAGTTACAAGGCACTGTTTGATAATTTTATAAAACTTGGCTTGGATTTTGAAAACCTTTGTAAAAAGTAGATAACAAAACAAAGAAGCTACAAGTGGAAATCGTGTTTATAAGTTAAATTTTAAAAAACCAAATGATTATCAAACATGGCCTAAATTTCTTCATTTTGCCCCTTCTGTTTCTACTTTGGGGAGGAGGGTGGAGCATATGACCACAACCTGTACCTGTTAAACCCATTGATCTGCCCCTTTCTTTTCCAACTACATCATATCGTCTTAAATACATAGTTCGATTTTCATAAATTTTCTGTTATAAATAGCTAAAGTTGAATAAATTCATGCAGCCACGTTCAACTAGCTGCAACTGCTTTGCCCATAACAGGGACGCAAGCTGCAACAAAGAAAATTACAAAAGATGAGCTTGGACATGTGGCTGGAATGGCAGCAACCGCAACAGCTAGTATTGGAAAATTCGACAAGAAGTTACATGGAGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGGTTAACCGAATAATCCTTTTCCTTGGCATCACTTTAGAAAAAGAAAGAGTCTCCATGGTATGCTCGAGCATATTATATGCTATCATGAAGTTACATATTCTGTTCTTTGTTTACATGCAGTTTTTGCCTGTTGTGGAAGGAACGGGCGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAAAATCCTGAACAGACTAATATCCAAGAATTCTCATGAGATACTAAACATCAATAAGGTCTTTTCTTTTTATTTTTGGTTGAAACCAACATCTTTCTTTGTTGCTTCATCATTAGAAACTTTGTCTAATGCTCTCAACTGATTATCTTGACTATAGGCTGTCAACATGTACAATGTGAAAAGAGAAAAGAGGCGAAGACATGAAGATAGGAAGCCCTCATCATCAACATCGGGCAAGTTGAAACCAAATAAGAAACTTCAAAAGAAGTCGCTGAAGAAGGGACCATCGAAGAAAGGGAAGGCAAAATGAAGTAATCCTTTAGAATCGATGGCAGATTGGGTACTAACTGTCTTCTTTATGAAAGAAGTTTTGCATTTGGACTATTTATTGTAGTGATGATCTCCATTTAAAGAATAGTGGTTCTCTATGTCACACACTAGCACAAAACGAAAATGTAGTTTTTATAGGGATTAACCAGTGGATTCCACCTTGTAGCAATCGAAATGATATATATATTTTTTTTAATATAATCGAAATGATATTGGTATCCC

mRNA sequence

ATGGTACCCCTGGATGCCCGGTCCCACCTGGTTCAGCCTGAATCATCTCTGAACCCTACTCCTTCTCTTACTCTCTTCATTCATCTTTCTGACTTAAGCGTCGGAGGCGGTGTGGCAAGTACCACACCGATGTCTGTCACTTCTGTAAGTCTCTTGAATCGGCCGGAGATGGAGACCCAGCAGCAAGTTCAGGTCGACGTTGCCCATCTCATGGCCTTCAATCCTCACCACCAGTTCATCTCCCCGCCGCCCTCCAGGGAGGAGCTGGTGAATGAATGTCTACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCCCTAGTGAAGTTGCCTCCACCTAAAACAAGATTGCCGAGGGAGAAGCCTCTTCCAAAGCCTAAGCCTCCTACAAAATGGAAACTTTTTGCGAAAAAACGAGGTATAAAGAACAGGAAAAAAGACAAGATTGTATATGACGAACAAACTCAAACATGGAAGCGCCGTCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATCATTGAAGCCAAGATGACTGATGAGCCGGGGATGGATCCCTTTGCTGAGAGGCAAGCAAATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGCGCACAGAATCTGAAACAGGCTGCAAAAGTTGGTGCTTTACCAAGCCACGTTCAACTAGCTGCAACTGCTTTGCCCATAACAGGGACGCAAGCTGCAACAAAGAAAATTACAAAAGATGAGCTTGGACATGTGGCTGGAATGGCAGCAACCGCAACAGCTAGTATTGGAAAATTCGACAAGAAGTTACATGGAGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACGGGCGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAAAATCCTGAACAGACTAATATCCAAGAATTCTCATGAGATACTAAACATCAATAAGGCTGTCAACATGTACAATGTGAAAAGAGAAAAGAGGCGAAGACATGAAGATAGGAAGCCCTCATCATCAACATCGGGCAAGTTGAAACCAAATAAGAAACTTCAAAAGAAGTCGCTGAAGAAGGGACCATCGAAGAAAGGGAAGGCAAAATGA

Coding sequence (CDS)

ATGGTACCCCTGGATGCCCGGTCCCACCTGGTTCAGCCTGAATCATCTCTGAACCCTACTCCTTCTCTTACTCTCTTCATTCATCTTTCTGACTTAAGCGTCGGAGGCGGTGTGGCAAGTACCACACCGATGTCTGTCACTTCTGTAAGTCTCTTGAATCGGCCGGAGATGGAGACCCAGCAGCAAGTTCAGGTCGACGTTGCCCATCTCATGGCCTTCAATCCTCACCACCAGTTCATCTCCCCGCCGCCCTCCAGGGAGGAGCTGGTGAATGAATGTCTACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCCCTAGTGAAGTTGCCTCCACCTAAAACAAGATTGCCGAGGGAGAAGCCTCTTCCAAAGCCTAAGCCTCCTACAAAATGGAAACTTTTTGCGAAAAAACGAGGTATAAAGAACAGGAAAAAAGACAAGATTGTATATGACGAACAAACTCAAACATGGAAGCGCCGTCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATCATTGAAGCCAAGATGACTGATGAGCCGGGGATGGATCCCTTTGCTGAGAGGCAAGCAAATAAGAAAAAACGAGTTGAAAAGCAAGAAAAGAATCGCGCACAGAATCTGAAACAGGCTGCAAAAGTTGGTGCTTTACCAAGCCACGTTCAACTAGCTGCAACTGCTTTGCCCATAACAGGGACGCAAGCTGCAACAAAGAAAATTACAAAAGATGAGCTTGGACATGTGGCTGGAATGGCAGCAACCGCAACAGCTAGTATTGGAAAATTCGACAAGAAGTTACATGGAGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACGGGCGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAAAATCCTGAACAGACTAATATCCAAGAATTCTCATGAGATACTAAACATCAATAAGGCTGTCAACATGTACAATGTGAAAAGAGAAAAGAGGCGAAGACATGAAGATAGGAAGCCCTCATCATCAACATCGGGCAAGTTGAAACCAAATAAGAAACTTCAAAAGAAGTCGCTGAAGAAGGGACCATCGAAGAAAGGGAAGGCAAAATGA

Protein sequence

MVPLDARSHLVQPESSLNPTPSLTLFIHLSDLSVGGGVASTTPMSVTSVSLLNRPEMETQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPSHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPSSSTSGKLKPNKKLQKKSLKKGPSKKGKAK

Homology

[Close]

BLAST of Spg022537 vs. NCBI nr
Match: XP_022961058.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata])

HSP 1 Score: 570.9 bits (1470), Expect = 8.6e-159
Identity = 300/329 (91.19%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 57  METQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTED 116
           MET Q+VQVD+ HLMAFNPHH F SPP SREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 117 RDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRH 176
           RDGPLVKL  PKT+LPREKPLPKPK PTKW+LFAKKRGIKNRKKDKI+YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 177 GYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPS 236
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NK+KRVEKQE NR QNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 237 HVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYR 296
           HVQLAATALPITGTQAATKKITKDELG+VAGMAATATAS GKFDKKL GEKPPKHEGKYR
Sbjct: 181 HVQLAATALPITGTQAATKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 297 KFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPS 356
           KFLPVVEGTGVGSREREQTEK+LNRLISKNSHEILNINKAVNMYNVKREKRR+H+DRKPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 357 SSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SSTS KLKPNKKLQKK LKKG SKKG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Spg022537 vs. NCBI nr
Match: XP_022987784.1 (ribosome biogenesis regulatory protein homolog [Cucurbita maxima])

HSP 1 Score: 570.9 bits (1470), Expect = 8.6e-159
Identity = 299/329 (90.88%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 57  METQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTED 116
           MET Q+VQVD+ HLMAF+PHH F SPPP+REELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 117 RDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRH 176
           RDGPLVKL  PKT+LPREKPLPKPK PTKW+LFAKKRGIKNRKKDKI+YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 177 GYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPS 236
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NK+KRVEKQE NR QNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 237 HVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYR 296
           HVQLAATALPITGTQA TKKITKDELG+VAGMAATATAS GKFDKKL GEKPPKHEGKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 297 KFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPS 356
           KFLPVVEGTGVGSREREQTEK+LNRLISKNSHEILNINKAVNMYNVKREKRR+H+DRKPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 357 SSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SSTS KLKPNKKLQKK LKKG SKKGKAK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGKAK 329

[Close]

BLAST of Spg022537 vs. NCBI nr
Match: XP_023515967.1 (ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515969.1 ribosome biogenesis regulatory protein homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 568.9 bits (1465), Expect = 3.3e-158
Identity = 298/329 (90.58%), Postives = 312/329 (94.83%), Query Frame = 0


Query: 57  METQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTED 116
           MET Q+VQVD+ HLMAFNPHH F SPP SREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 117 RDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRH 176
           RDGPLVKL  PKT+LPREKPLPKPK PTKW+LFAKKRGIKNRKKDKI+YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 177 GYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPS 236
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NK+KRVEKQE NR QNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 237 HVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYR 296
           HVQLAATALPITGTQA TKKITKDELG+VAGMAATATAS GKFDKKL GEKPPKHEGKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 297 KFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPS 356
           KFLPVVEGTGVGSREREQTEK+LNRLISKNSHEILN+NKAVNMYNVKREKRR+H+DRKPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNVNKAVNMYNVKREKRRKHDDRKPS 300

Query: 357 SSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SSTS KLKPNKKLQKK LKKG SKKG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Spg022537 vs. NCBI nr
Match: KAG6589856.1 (Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 562.0 bits (1447), Expect = 4.0e-156
Identity = 296/329 (89.97%), Postives = 310/329 (94.22%), Query Frame = 0


Query: 57  METQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTED 116
           MET Q+V VD+ HLMAFNPHH F SPP SREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVLVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 117 RDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRH 176
           RDGPLVKL  PKT+LPREKPLPKPK PTKW+LFAKKRGIKNRKKDKI+YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 177 GYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPS 236
           GYDRANDEENIPIIEAKMTDEPG+DPFA+R+ NK+KRVEKQE NR QNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 237 HVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYR 296
           HVQLAATALPITGTQA TKKITKDELG+VAGMAATATAS GKFDKKL GEKPPKHEGKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 297 KFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPS 356
           KFLPVVEGTGVGSREREQTEK+LNRLISKNSHEILNINKAVNMYNVKREKRR+H+DRKPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 357 SSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SSTS KLK NKKLQKK LKKG SKKG+AK
Sbjct: 301 SSTSSKLKANKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Spg022537 vs. NCBI nr
Match: XP_022144805.1 (ribosome biogenesis regulatory protein homolog [Momordica charantia])

HSP 1 Score: 557.4 bits (1435), Expect = 9.8e-155
Identity = 293/329 (89.06%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 57  METQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTED 116
           ME QQQ+QVD+ HLMAFNPHH   SPP SREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 117 RDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRH 176
           RDGPLV+LPPPKTRLPREK LPKPKPPTKW+LFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120

Query: 177 GYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPS 236
           GYDRANDEENIPIIEAKMTDEPGMDPFAERQ+NK+KRVEKQE NR QNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 237 HVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYR 296
           HVQLAATALPITGTQ A KK+TKDELG+VAGMAATATAS GKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240

Query: 297 KFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPS 356
           KFLPVVEGTGVGSREREQTE +LNRLISKNSHEILN+NKA+NMYNVKREKRR+H D KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKH-DGKPS 300

Query: 357 SSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SSTS KLKPNKK QKKS+KKG S KGKAK
Sbjct: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 328

[Close]

BLAST of Spg022537 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 387.9 bits (995), Expect = 1.4e-106
Identity = 207/321 (64.49%), Postives = 255/321 (79.44%), Query Frame = 0


Query: 56  EMETQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTE 115
           EMET+Q  QVDV +L+AFNP+H+F S P SR ELV E L +GT+LVQ IAN+LF  PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 116 DRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRR 175
             DGP+V+LPPP T+LPREK +P+PKPPTKW+ FA K+GI+ RKK+K+V+DEQT  +KRR
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 176 HGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALP 235
           HGYDR ND+ ++PIIEAK +DEPG+DPFA+R  +KKKRV KQEKNR QNLK A K GALP
Sbjct: 124 HGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALP 183

Query: 236 SHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKY 295
           SHVQLAAT+LPI+GT+A  KKI KDELG VAG+AAT+TAS GKFDKKL GEKPPK +GK+
Sbjct: 184 SHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKH 243

Query: 296 RKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKP 355
            K+LPVV G G  + E+EQT  +L+++ SK+SHEILN+ KA+NMYNVK+EK++       
Sbjct: 244 HKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK------- 303

Query: 356 SSSTSGKLKPNKKLQKKSLKK 377
            S  S KLKP K + KK   K
Sbjct: 304 -SGRSDKLKPKKDITKKPANK 316

[Close]

BLAST of Spg022537 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.4e-32
Identity = 115/334 (34.43%), Postives = 187/334 (55.99%), Query Frame = 0


Query: 52  LNRPEMETQQQVQVDVAHLMAF--NPHHQFISPPPSREELVNECLQKGTELVQAIANELF 111
           L R  +  + +++ D+ +L+A   NP        PS E  +    +  T+L   + N+L+
Sbjct: 21  LQRITVHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LINQLW 80

Query: 112 ILPSTEDRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQT 171
            LP+    +  + +LP P TRLPREKPLP+P+P T+W+ FA+ +GI+ +KK  +V+DE +
Sbjct: 81  RLPTERVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEAS 140

Query: 172 QTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAA 231
             W+RR GY RA D+    +IE   + +P  D FA+R   KK+RV K E NR +NL +A 
Sbjct: 141 GQWRRRWGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAH 200

Query: 232 KVGALPSHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPP 291
           K+  +PS     +  L  TG Q      +K+ELG    +A  +TAS+G+F ++L  EK P
Sbjct: 201 KM-QMPS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAP 260

Query: 292 KHEGKYRKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRR 351
           +  GK RKF P+    G  + E++   ++L  + SK     L++ +A N       K+ R
Sbjct: 261 RGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPR--LDVTRATN-------KQMR 320

Query: 352 HEDRKPSSSTSGKLKPNKKLQKKSLKKGPSKKGK 384
            ED++ ++    + K ++K ++K  ++GPS K K
Sbjct: 321 EEDQEEAAK---RRKMSQKGKRKGGRQGPSGKRK 324

[Close]

BLAST of Spg022537 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-31
Identity = 115/334 (34.43%), Postives = 187/334 (55.99%), Query Frame = 0


Query: 52  LNRPEMETQQQVQVDVAHLMAF--NPHHQFISPPPSREELVNECLQKGTELVQAIANELF 111
           L R  +  + +++ D+ +L+A   NP        PS E  +    +  T+L   + N+L+
Sbjct: 21  LQRITVHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LVNQLW 80

Query: 112 ILPSTEDRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQT 171
            LP+    +  + +LP P TRLPREKPLP+P+P T+W+ FA+ +GI+ +KK  +V+DE +
Sbjct: 81  QLPTERVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVS 140

Query: 172 QTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAA 231
             W+RR GY RA D+    +IE   + +P  D FA+R   KK+RV K E NR +NL +A 
Sbjct: 141 GQWRRRWGYKRARDDTKEWLIEVPGSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAH 200

Query: 232 KVGALPSHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPP 291
           K+  +PS     +  L  TG Q      +K+ELG    +A  +TAS+G+F ++L  EK P
Sbjct: 201 KM-QMPS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAP 260

Query: 292 KHEGKYRKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRR 351
           +  GK RKF P+    G  + E++   ++L  + SK     L++ +A N       K+ R
Sbjct: 261 RGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATN-------KQMR 320

Query: 352 HEDRKPSSSTSGKLKPNKKLQKKSLKKGPSKKGK 384
            ED++ ++    + K ++K +KK  ++GPS + K
Sbjct: 321 EEDQEEAAK---RRKMSQKGKKKGGRQGPSGRRK 324

[Close]

BLAST of Spg022537 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 3.2e-31
Identity = 116/334 (34.73%), Postives = 185/334 (55.39%), Query Frame = 0


Query: 52  LNRPEMETQQQVQVDVAHLMAF--NPHHQFISPPPSREELVNECLQKGTELVQAIANELF 111
           L R  +  + ++Q D+ +L+A   NP        P+ E  +    +  T+L   + N+L+
Sbjct: 21  LQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQL---LINQLW 80

Query: 112 ILPSTEDRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQT 171
            LP+    +  + +LP P TRLPREKPLP+P+P T+W+ FA+ +GI+ +KK  +V+DE +
Sbjct: 81  QLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVS 140

Query: 172 QTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAA 231
             W+RR GY RA D+    +IE     +P  D FA+R   KK+RV K E NR +NL +A 
Sbjct: 141 GQWRRRWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAH 200

Query: 232 KVGALPSHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPP 291
           K+  LPS     A  L  TG Q      +K+ELG    +A  +TAS+G+F ++L  EK P
Sbjct: 201 KM-QLPS-----AAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKVP 260

Query: 292 KHEGKYRKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRR 351
           +  GK RKF P+    G  + E++   ++L  + SK     L++ +A N       K+ R
Sbjct: 261 RGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATN-------KQMR 320

Query: 352 HEDRKPSSSTSGKLKPNKKLQKKSLKKGPSKKGK 384
            ED++ ++    + K ++K ++K  ++GP  K K
Sbjct: 321 EEDQEEAAK---RRKMSQKGKRKGGRQGPGGKRK 324

[Close]

BLAST of Spg022537 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.4e-31
Identity = 114/334 (34.13%), Postives = 186/334 (55.69%), Query Frame = 0


Query: 52  LNRPEMETQQQVQVDVAHLMAF--NPHHQFISPPPSREELVNECLQKGTELVQAIANELF 111
           L R  +  + +++ D+ +L+A   NP        P++E  +    +  T+L   + N+L+
Sbjct: 21  LQRITVLKELELEFDLGNLLASDRNPPTGLRHAGPTQEAELRALARDNTQL---LINQLW 80

Query: 112 ILPSTEDRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQT 171
            LP+    +  + +LP P TRLPREKP+P+P+P T+W+ FA+ +GI+ +KK  +V+DE +
Sbjct: 81  QLPTERVEEALVARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVS 140

Query: 172 QTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAA 231
             W+RR GY RA D+    +IE     +P  D FA+R   KK+RV K E NR +NL +A 
Sbjct: 141 GRWRRRWGYQRARDDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAH 200

Query: 232 KVGALPSHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPP 291
           K+  LPS     A  +  TG Q      +K+ELG    +A  +TAS+G+F ++L  EK P
Sbjct: 201 KM-QLPS-----AAGMHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAP 260

Query: 292 KHEGKYRKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRR 351
           +  GK RKF P+    G  + ER+   ++L  + SK     ++I +A N       K+ R
Sbjct: 261 RGSGKKRKFQPLF---GDFAAERKSQLEMLRVMNSKKPQ--MDITRATN-------KQMR 320

Query: 352 HEDRKPSSSTSGKLKPNKKLQKKSLKKGPSKKGK 384
            ED++ ++    + K ++K ++K  ++GP  K K
Sbjct: 321 EEDQEEAAK---RRKMSQKGKRKGGRQGPGSKRK 324

[Close]

BLAST of Spg022537 vs. ExPASy TrEMBL
Match: A0A6J1JJT9 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111485227 PE=3 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 4.2e-159
Identity = 299/329 (90.88%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 57  METQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTED 116
           MET Q+VQVD+ HLMAF+PHH F SPPP+REELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 117 RDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRH 176
           RDGPLVKL  PKT+LPREKPLPKPK PTKW+LFAKKRGIKNRKKDKI+YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 177 GYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPS 236
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NK+KRVEKQE NR QNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 237 HVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYR 296
           HVQLAATALPITGTQA TKKITKDELG+VAGMAATATAS GKFDKKL GEKPPKHEGKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 297 KFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPS 356
           KFLPVVEGTGVGSREREQTEK+LNRLISKNSHEILNINKAVNMYNVKREKRR+H+DRKPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 357 SSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SSTS KLKPNKKLQKK LKKG SKKGKAK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGKAK 329

[Close]

BLAST of Spg022537 vs. ExPASy TrEMBL
Match: A0A6J1HAS5 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111461680 PE=3 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 4.2e-159
Identity = 300/329 (91.19%), Postives = 313/329 (95.14%), Query Frame = 0


Query: 57  METQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTED 116
           MET Q+VQVD+ HLMAFNPHH F SPP SREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 117 RDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRH 176
           RDGPLVKL  PKT+LPREKPLPKPK PTKW+LFAKKRGIKNRKKDKI+YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 177 GYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPS 236
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NK+KRVEKQE NR QNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 237 HVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYR 296
           HVQLAATALPITGTQAATKKITKDELG+VAGMAATATAS GKFDKKL GEKPPKHEGKYR
Sbjct: 181 HVQLAATALPITGTQAATKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 297 KFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPS 356
           KFLPVVEGTGVGSREREQTEK+LNRLISKNSHEILNINKAVNMYNVKREKRR+H+DRKPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 357 SSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SSTS KLKPNKKLQKK LKKG SKKG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Spg022537 vs. ExPASy TrEMBL
Match: A0A6J1CSP0 (Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC111014399 PE=3 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 4.8e-155
Identity = 293/329 (89.06%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 57  METQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTED 116
           ME QQQ+QVD+ HLMAFNPHH   SPP SREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 117 RDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRRH 176
           RDGPLV+LPPPKTRLPREK LPKPKPPTKW+LFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120

Query: 177 GYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALPS 236
           GYDRANDEENIPIIEAKMTDEPGMDPFAERQ+NK+KRVEKQE NR QNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 237 HVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKYR 296
           HVQLAATALPITGTQ A KK+TKDELG+VAGMAATATAS GKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240

Query: 297 KFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKPS 356
           KFLPVVEGTGVGSREREQTE +LNRLISKNSHEILN+NKA+NMYNVKREKRR+H D KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKH-DGKPS 300

Query: 357 SSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SSTS KLKPNKK QKKS+KKG S KGKAK
Sbjct: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 328

[Close]

BLAST of Spg022537 vs. ExPASy TrEMBL
Match: A0A6J1F066 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111440969 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 8.4e-144
Identity = 274/330 (83.03%), Postives = 301/330 (91.21%), Query Frame = 0


Query: 56  EMETQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTE 115
           EME QQ  Q+D+ +LMAFNPHHQ+ S   SRE+LV+ECLQKG EL Q IAN+LF LPSTE
Sbjct: 2   EMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTE 61

Query: 116 DRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRR 175
           DRDGPLV+LPPP TRLPREKPLPKPKPPTKW+LFAKKRGIKNRKKDKIVYD+QT +WKRR
Sbjct: 62  DRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKRR 121

Query: 176 HGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALP 235
           HGYDRANDEENIPIIEAKMTDEPG+DPFA R+ANKK RVEKQE+N+ QNLKQAAKVGALP
Sbjct: 122 HGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALP 181

Query: 236 SHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKY 295
           SHVQLAATALPITGTQAA KKITKDELG+VAGMAAT+TAS GKFDKKL GEKP KH+GKY
Sbjct: 182 SHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKY 241

Query: 296 RKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKP 355
           RKFLPVVEGTG+GS+EREQTEK+LNRLISKNSHEILNINKAVNMYNVK+EK++R++  K 
Sbjct: 242 RKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKS 301

Query: 356 SSSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SS +S KLKPNKKLQKK LKKG SK GKAK
Sbjct: 302 SSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of Spg022537 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 1.1e-143
Identity = 274/330 (83.03%), Postives = 301/330 (91.21%), Query Frame = 0


Query: 56  EMETQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTE 115
           EME QQ  Q+D+ +LMAFNPHH+F S   SRE+LV+ECLQKG EL Q IAN+LF LPSTE
Sbjct: 2   EMENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTE 61

Query: 116 DRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRR 175
           DRDGPLV+LPPP TRLPREKPLPKPKPPTKW+LFAKKRGIKNRKKDKIVYD+QT +WKRR
Sbjct: 62  DRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKRR 121

Query: 176 HGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALP 235
           HGYDRANDEENIPIIEAKMTDEPG+DPFA R+ANKK RVEKQE+N+ QNLKQAAKVGALP
Sbjct: 122 HGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALP 181

Query: 236 SHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKY 295
           SHVQLAATALPITGTQAA KKITKDELG+VAGMAAT+TAS GKFDKKL GEKP KH+GKY
Sbjct: 182 SHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKY 241

Query: 296 RKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKP 355
           RKFLPVVEGTG+GS+EREQTEK+LNRLISKNSHEILNINKAVNMYNVK+EK++R++  K 
Sbjct: 242 RKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKS 301

Query: 356 SSSTSGKLKPNKKLQKKSLKKGPSKKGKAK 386
           SS +S KLKPNKKLQKK LKKG SK GKAK
Sbjct: 302 SSMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of Spg022537 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 387.9 bits (995), Expect = 9.6e-108
Identity = 207/321 (64.49%), Postives = 255/321 (79.44%), Query Frame = 0


Query: 56  EMETQQQVQVDVAHLMAFNPHHQFISPPPSREELVNECLQKGTELVQAIANELFILPSTE 115
           EMET+Q  QVDV +L+AFNP+H+F S P SR ELV E L +GT+LVQ IAN+LF  PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 116 DRDGPLVKLPPPKTRLPREKPLPKPKPPTKWKLFAKKRGIKNRKKDKIVYDEQTQTWKRR 175
             DGP+V+LPPP T+LPREK +P+PKPPTKW+ FA K+GI+ RKK+K+V+DEQT  +KRR
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 176 HGYDRANDEENIPIIEAKMTDEPGMDPFAERQANKKKRVEKQEKNRAQNLKQAAKVGALP 235
           HGYDR ND+ ++PIIEAK +DEPG+DPFA+R  +KKKRV KQEKNR QNLK A K GALP
Sbjct: 124 HGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALP 183

Query: 236 SHVQLAATALPITGTQAATKKITKDELGHVAGMAATATASIGKFDKKLHGEKPPKHEGKY 295
           SHVQLAAT+LPI+GT+A  KKI KDELG VAG+AAT+TAS GKFDKKL GEKPPK +GK+
Sbjct: 184 SHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKH 243

Query: 296 RKFLPVVEGTGVGSREREQTEKILNRLISKNSHEILNINKAVNMYNVKREKRRRHEDRKP 355
            K+LPVV G G  + E+EQT  +L+++ SK+SHEILN+ KA+NMYNVK+EK++       
Sbjct: 244 HKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK------- 303

Query: 356 SSSTSGKLKPNKKLQKKSLKK 377
            S  S KLKP K + KK   K
Sbjct: 304 -SGRSDKLKPKKDITKKPANK 316

The following BLAST results are available for this feature:

BLAST of Spg022537 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961058.1	8.6e-159	91.19	ribosome biogenesis regulatory protein homolog [Cucurbita moschata]	[more]
XP_022987784.1	8.6e-159	90.88	ribosome biogenesis regulatory protein homolog [Cucurbita maxima]	[more]
XP_023515967.1	3.3e-158	90.58	ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp....	[more]
KAG6589856.1	4.0e-156	89.97	Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosp...	[more]
XP_022144805.1	9.8e-155	89.06	ribosome biogenesis regulatory protein homolog [Momordica charantia]	[more]

BLAST of Spg022537 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	1.4e-106	64.49	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9CYH6	6.4e-32	34.43	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
A1A5P2	1.1e-31	34.43	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]
Q15050	3.2e-31	34.73	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]
Q2KIH4	5.4e-31	34.13	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]

BLAST of Spg022537 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJT9	4.2e-159	90.88	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114852...	[more]
A0A6J1HAS5	4.2e-159	91.19	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1CSP0	4.8e-155	89.06	Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1F066	8.4e-144	83.03	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HW20	1.1e-143	83.03	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]

BLAST of Spg022537 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	9.6e-108	64.49	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..385
None	No IPR available	PANTHER	PTHR17602:SF5	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 56..375
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 63..224 e-value: 8.4E-51 score: 172.1
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 56..375

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022537.1	Spg022537.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus