Spg022528 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022528
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	WD repeat containing protein
Location	scaffold2: 8364606 .. 8366844 (-)
RNA-Seq Expression	Spg022528
Synteny	Spg022528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAGTCATAGAATTAGAATTTTAGTCCCAGGGGACGTTGCTTGGCGCGCACACAAGAACACGCAAAAAGACCGAGTCAACGCTGCCATCGCCAAGCACTCAACTTCGCCACTTTCAATGGCGGACCCACGACCGCCATTGCCATCTCCATCTTCGCCGCCGTCTTTACCTCCCAATGATTCGCTACCCAGACGCTTCAAGGTCATCTGGCGTGTTCTATTGATCTCCAACTTCGCCCTTTCAGGTTTGATCTACTGTCTCCTCCTCCTGAATTTTCACTTTCCTCGCATTCGTGATGGAATGTTTTTTTTTTTTTTGTTAATCTGAATGTCGATTGTTAACTTCCCATATCCTCGAAATTGAAATGATTCTGAGAAATGGGAAATGGAGTTTGTGATGGAAATAAACTGTATGTTTAATGTTTTAGTTCTGGCAGGCAAGGTGTTTGATGTAATGTCTGGGATGAATTTCTTTGTTTAGTTGTGAAATATGTTGCTATTGTCGTGATTGCTTCGTGGAATATCATTGTATATTCTGTCTAAATGCTTCTTCTGCGGCGAAGTTGTTGTTAATAGTGTCAGTTCACACTTCATCACTTCCAGCCATATTAGGCCAAAGCTTTTGAAAGAGAGGATCGTTTTTTTATTATCTGGCAATATCTCAGCTCGTTTTAGTTGAGACATTAAAAAGTTGCTATTTATATATTAGATAAATATGAGGTTCTATCTCAAAACCAATTGACAATGAAATGAGTAACTTATGTATCTTACAAAGATGACAAGGTCTCTTCATCTTTTGAATGTGGGATATACTTTATATGCCACCTCAAGATGGTGTCTCTTTGGATTTACAATTCTTGGATCGGATTGTTTTTTCCTTTCTTGGACTGAAGACCCGTTTGAACTTTATGGGCTATGATATCATAGTATATAAACATGAAGTTACATCCCATGTATCTTAGAAAGATGGTGAAATTTCCCCCTCTTTTCAATAGGGATCCTAACATTATAGAGAGAAATGTATATGTATAAGCAGTCCTATTGAAGTCGATATGCCCTGATCTTTATGTTATAATTCTATCTAAAGATGAGATTGCTGAGAAAATGTGTCTGGTTTTCGTTGAATGGGTACTCTCATGGTATGATACTATAGCCACCACAGTATTGTAGCACATGCATAAAAGTTGGGTTGTAAAGATTGGTATTAGTTCTTTCTTAGTTCTTCCAGGTTCCGATCTACCTTCTACATGCTCCACTATTATTATCAAACTTCACTTGTTCGAGTGTGACTCTTAGCAGCCACAGGGCTTTCTTCCAAGATGTGGGGTGATTCTCTGTTTATGAGCAAACTTCACACATATCTTGCAAGACCTTCTGAATTTTCAAATTAATGGTCGAGAGAGGAAGATATAGTTTCTTCAATATCTCATCTAAGGTTCAACTTTAGATGCTCCCTTCCTCATGTTGTCCAATAGTTCGAGTTAGTTGATAGTTAGTTTATTTAATTTCAGTAGGAGAATCATTTACTGCAACCACATTGGCAGAATTTACTCTATTCAACTTCAAACAAAACATTTGTTACTAACACGAACGTAGCTCAACAGTTAAGACATCTATTCTTTTTCCCGAAGTCAGAAGTTGAAATCCCCCTTCCAGCCGCATTTGTTGTACTAAAAGAAACTTCAAACATTAGTTTGCGACTAATGTGGATTTCATGCATTGCAGCCTACCTGTTTGCAAGTGCAAGGAAGAAAGATTTGGGTCAAATGGAGAATGATCAAGTAGAGAAAGATTCGGGTCAACCGGAAAATGATGGAGTAGAAAAACAAAGTGACAGTGAAGTTATTGCGGAAATCCCCTCAACATTTATGGTGGATACCACTGGCATAGTTACTGAGAACATCTCTGAAGATCAGAAGCAAGAACCATTCCAGTGGATGTTTCATGGTTGGAGAGAAAAGATAGGTTTGAGTAAAAAATGAATTGATGGTGAAATGCTGATACACTGAACAGTTAATTCTCCAACACTGATTACAGCTCATCCAGGTAAATATGTTTAGCTGCTGTAAAATTTTCTTTTAGGCGATTCTCTAGGAGACTGATTGTTATACTGAAACCTTACTGAACCGGATATCTTCTTGTAGATTTATCTGCAAGTTTGTAACGACAATTTCTACAGATATTGATCTCTTTAATGGCGATTTAATTGGTGGAATGTGATGTGAATTGATTTGTTCAAG

mRNA sequence

CATAGTCATAGAATTAGAATTTTAGTCCCAGGGGACGTTGCTTGGCGCGCACACAAGAACACGCAAAAAGACCGAGTCAACGCTGCCATCGCCAAGCACTCAACTTCGCCACTTTCAATGGCGGACCCACGACCGCCATTGCCATCTCCATCTTCGCCGCCGTCTTTACCTCCCAATGATTCGCTACCCAGACGCTTCAAGGTCATCTGGCGTGTTCTATTGATCTCCAACTTCGCCCTTTCAGCCTACCTGTTTGCAAGTGCAAGGAAGAAAGATTTGGGTCAAATGGAGAATGATCAAGTAGAGAAAGATTCGGGTCAACCGGAAAATGATGGAGTAGAAAAACAAAGTGACAGTGAAGTTATTGCGGAAATCCCCTCAACATTTATGGTGGATACCACTGGCATAGTTACTGAGAACATCTCTGAAGATCAGAAGCAAGAACCATTCCAGTGGATGTTTCATGGTTGGAGAGAAAAGATAGGTTTGAGTAAAAAATGA

Coding sequence (CDS)

CATAGTCATAGAATTAGAATTTTAGTCCCAGGGGACGTTGCTTGGCGCGCACACAAGAACACGCAAAAAGACCGAGTCAACGCTGCCATCGCCAAGCACTCAACTTCGCCACTTTCAATGGCGGACCCACGACCGCCATTGCCATCTCCATCTTCGCCGCCGTCTTTACCTCCCAATGATTCGCTACCCAGACGCTTCAAGGTCATCTGGCGTGTTCTATTGATCTCCAACTTCGCCCTTTCAGCCTACCTGTTTGCAAGTGCAAGGAAGAAAGATTTGGGTCAAATGGAGAATGATCAAGTAGAGAAAGATTCGGGTCAACCGGAAAATGATGGAGTAGAAAAACAAAGTGACAGTGAAGTTATTGCGGAAATCCCCTCAACATTTATGGTGGATACCACTGGCATAGTTACTGAGAACATCTCTGAAGATCAGAAGCAAGAACCATTCCAGTGGATGTTTCATGGTTGGAGAGAAAAGATAGGTTTGAGTAAAAAATGA

Protein sequence

HSHRIRILVPGDVAWRAHKNTQKDRVNAAIAKHSTSPLSMADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWREKIGLSKK

Homology

[Close]

BLAST of Spg022528 vs. NCBI nr
Match: KAG6588036.1 (hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021933.1 hypothetical protein SDJN02_15661 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.0 bits (502), Expect = 6.5e-47
Identity = 103/127 (81.10%), Postives = 111/127 (87.40%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEND
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEND 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           + EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTENISEDQ Q+PF W+  GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

Query: 160 KIGLSKK 167
           K G SKK
Sbjct: 121 KTGSSKK 126

[Close]

BLAST of Spg022528 vs. NCBI nr
Match: XP_023530326.1 (uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 3.2e-46
Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEND
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEND 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           + EKD GQ ENDG+EK SDSE++ EIPST MVDTTGIVTENISEDQ Q+PF W+  GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTLMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

Query: 160 KIGLSKK 167
           K G SKK
Sbjct: 121 KTGSSKK 126

[Close]

BLAST of Spg022528 vs. NCBI nr
Match: XP_022968528.1 (uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima])

HSP 1 Score: 194.1 bits (492), Expect = 9.4e-46
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQME+D
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESD 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           + EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTENI EDQ Q+PF W+  GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENIPEDQHQKPFHWIVDGWRE 120

Query: 160 KIGLSKK 167
           K G SKK
Sbjct: 121 KTGSSKK 126

[Close]

BLAST of Spg022528 vs. NCBI nr
Match: XP_022926648.1 (uncharacterized protein LOC111433716 [Cucurbita moschata])

HSP 1 Score: 192.2 bits (487), Expect = 3.6e-45
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           MADPR  L S SSPPSL PND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEN+
Sbjct: 1   MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENN 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           + EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTENISEDQ Q+PF W+  GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

Query: 160 KIGLSKK 167
           K G SKK
Sbjct: 121 KTGSSKK 126

[Close]

BLAST of Spg022528 vs. NCBI nr
Match: XP_004135711.1 (uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36
Identity = 87/127 (68.50%), Postives = 98/127 (77.17%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           M DPR PLPS SS   LPPNDSLP+RFKV+WRVLLISNFALSAY+FASARK+   Q+END
Sbjct: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           Q            VEKQSDSE+I EIPST MVDTTGIVTEN+ EDQ+QEP Q +  GWRE
Sbjct: 61  Q------------VEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVVSGWRE 115

Query: 160 KIGLSKK 167
           K+G S+K
Sbjct: 121 KLGFSRK 115

[Close]

BLAST of Spg022528 vs. ExPASy TrEMBL
Match: A0A6J1HYA0 (uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467730 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.6e-46
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQME+D
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESD 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           + EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTENI EDQ Q+PF W+  GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENIPEDQHQKPFHWIVDGWRE 120

Query: 160 KIGLSKK 167
           K G SKK
Sbjct: 121 KTGSSKK 126

[Close]

BLAST of Spg022528 vs. ExPASy TrEMBL
Match: A0A6J1EIP0 (uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC111433716 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.7e-45
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           MADPR  L S SSPPSL PND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEN+
Sbjct: 1   MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENN 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           + EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTENISEDQ Q+PF W+  GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

Query: 160 KIGLSKK 167
           K G SKK
Sbjct: 121 KTGSSKK 126

[Close]

BLAST of Spg022528 vs. ExPASy TrEMBL
Match: A0A0A0M1X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.1e-37
Identity = 87/127 (68.50%), Postives = 98/127 (77.17%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           M DPR PLPS SS   LPPNDSLP+RFKV+WRVLLISNFALSAY+FASARK+   Q+END
Sbjct: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           Q            VEKQSDSE+I EIPST MVDTTGIVTEN+ EDQ+QEP Q +  GWRE
Sbjct: 61  Q------------VEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVVSGWRE 115

Query: 160 KIGLSKK 167
           K+G S+K
Sbjct: 121 KLGFSRK 115

[Close]

BLAST of Spg022528 vs. ExPASy TrEMBL
Match: A0A1S3BR82 (uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34
Identity = 83/127 (65.35%), Postives = 96/127 (75.59%), Query Frame = 0


Query: 40  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEND 99
           M   R PLPS SS   LPPNDSLP+RFKV+WR+LLISNFALSAY+FASARK+   ++END
Sbjct: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60

Query: 100 QVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 159
           Q            VEKQSDSE+I EIPST MVDTTGIVTEN+ EDQ+QEP Q +  GWRE
Sbjct: 61  Q------------VEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 115

Query: 160 KIGLSKK 167
           K+G S+K
Sbjct: 121 KLGFSRK 115

[Close]

BLAST of Spg022528 vs. ExPASy TrEMBL
Match: A0A6J1D315 (uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016544 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 8.3e-32
Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 40  MADPRPPLPSPSS-PPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMEN 99
           M DPR PLPS SS PP LPPND LPRRFKVIWRVLLISNFAL+AY+FA+ARKKDLG+ME 
Sbjct: 1   MTDPRAPLPSSSSPPPPLPPNDLLPRRFKVIWRVLLISNFALAAYMFANARKKDLGRMEK 60

Query: 100 DQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMF 155
           D             VEK SD EV+  IPST MVDTT I  ENISED ++EPFQWMF
Sbjct: 61  DP------------VEKHSDGEVMTNIPSTLMVDTTAIAAENISEDHQREPFQWMF 104

[Close]

BLAST of Spg022528 vs. TAIR 10
Match: AT1G55160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 51  SSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPEN 110
           S PP  PP +S  RR+K +W +LL  N A+  YLF   +KKDL  +  +   K S     
Sbjct: 5   SVPPPPPPKESFARRYKYVWPLLLTVNLAVGGYLFFRTKKKDLDPVVEETAAKSSSVAAP 64

Query: 111 DGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE 160
             VEK   S V+AE P            E I E Q++E F+WM    R+
Sbjct: 65  VTVEKTLSSTVVAE-PVVIK------AREPIPEKQQRELFKWMLEEKRK 106

[Close]

BLAST of Spg022528 vs. TAIR 10
Match: AT1G55160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08
Identity = 43/124 (34.68%), Postives = 58/124 (46.77%), Query Frame = 0


Query: 36  SPLSMADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQ 95
           SP + A     +   S PP  PP +S  RR+K +W +LL  N A+  YLF   +KKDL  
Sbjct: 41  SPAAAAAASYTMGGGSVPPPPPPKESFARRYKYVWPLLLTVNLAVGGYLFFRTKKKDLDP 100

Query: 96  MENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFH 155
           +  +   K S       VEK   S V+AE P            E I E Q++E F+WM  
Sbjct: 101 VVEETAAKSSSVAAPVTVEKTLSSTVVAE-PVVIK------AREPIPEKQQRELFKWMLE 157

Query: 156 GWRE 160
             R+
Sbjct: 161 EKRK 157

[Close]

BLAST of Spg022528 vs. TAIR 10
Match: AT1G55160.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 9.5e-04
Identity = 43/149 (28.86%), Postives = 59/149 (39.60%), Query Frame = 0


Query: 36  SPLSMADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFAL--------------- 95
           SP + A     +   S PP  PP +S  RR+K +W +LL  N A+               
Sbjct: 41  SPAAAAAASYTMGGGSVPPPPPPKESFARRYKYVWPLLLTVNLAVGGFCSSLDENRIVFS 100

Query: 96  ----------SAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFM 155
                      +YLF   +KKDL  +  +   K S       VEK   S V+AE P    
Sbjct: 101 FIFMMLRVIYDSYLFFRTKKKDLDPVVEETAAKSSSVAAPVTVEKTLSSTVVAE-PVVIK 160

Query: 156 VDTTGIVTENISEDQKQEPFQWMFHGWRE 160
                   E I E Q++E F+WM    R+
Sbjct: 161 ------AREPIPEKQQRELFKWMLEEKRK 182

The following BLAST results are available for this feature:

BLAST of Spg022528 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588036.1	6.5e-47	81.10	hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023530326.1	3.2e-46	80.31	uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]	[more]
XP_022968528.1	9.4e-46	79.53	uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]	[more]
XP_022926648.1	3.6e-45	79.53	uncharacterized protein LOC111433716 [Cucurbita moschata]	[more]
XP_004135711.1	1.0e-36	68.50	uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]	[more]

BLAST of Spg022528 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg022528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYA0	4.6e-46	79.53	uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EIP0	1.7e-45	79.53	uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A0A0M1X9	5.1e-37	68.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1	[more]
A0A1S3BR82	1.1e-34	65.35	uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=...	[more]
A0A6J1D315	8.3e-32	68.97	uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Spg022528 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55160.2	1.3e-08	36.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55160.1	8.3e-08	34.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55160.3	9.5e-04	28.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..60
None	No IPR available	PANTHER	PTHR34364:SF9	SUBFAMILY NOT NAMED	coord: 50..158
None	No IPR available	PANTHER	PTHR34364	WAS/WASL-INTERACTING FAMILY PROTEIN	coord: 50..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022528.1	Spg022528.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane