Spg022483 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022483
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING-type domain-containing protein
Location	scaffold2: 5298137 .. 5301049 (+)
RNA-Seq Expression	Spg022483
Synteny	Spg022483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACGATATTTAAATCAAATCTCGGCCCTCTGTTTTTCCTAGTCTGTGGAAAAGAGCGAGCGAAGCAGAGGAGTTTCCGTTATCCATTCTCTCTCTTTCTCTCTCTCTCTCTCCCTCGAAGATCTTCTCTCTCCCGGAAAAAATATCCACACAAATTAGGGTTTCTCTGCGACCTACGTTCCTTCAATTCGATTTCAACTCTTCAATCATGGTTACTGATTCGATCACCAATGCTTCCATTTCTTTGGCTCCAAACGCCCGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTGAGGACTCTCTCTCTCTTTCTGTCTCAGACGTAAATCTTCTCATTTTTTTTTTTCCTTTTAATTTTAATGCTGGAGAATTTTTTTTTGTTGATTGTTGATTTTTTTTTTGTTCTCTAATATGTCGTAATTGTTTCGGTGGGGGGTTTCAGGTTAGGAATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTATAACTACGAATTGTGTTTCATTTTGTTGTTAATTGAATTTATTTATGGAACGGGATTTATGCATGTGAGAATTTGCTTTTTAATCGATTTGGGTTCACGAGTGATAGGTGCTGTAAAGAACAAAAAATGGAACGAAGATGACGATCGCCTTGATTCAGTGGTCATTAAAACGAGCAAAGATGATAATCTTTCCTCTAAAAAAATAAATATGAGGGAAATAGGAGAAGAGAACGACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGCCCCCCCAGTCTTGGCAGTAGTATCTTGGGTGGTAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGTCGTAGCAGCTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGGAGATGATGATTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTGGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGGGGTAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGCACAAATGAGTTGGGCGTAGGAGATGGTGACTCAAGTATTGAACGTGGGAGAATTGCGCAGAGGGCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAGCTTAGTTTACCGAATACAGACCGGCGCTTTGGATGTGGAAGCATCCCTTGGGCGTGTAGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTGCCTTGTTTCTGTGGATTCCGGCTGTGCCTTTTCTGTCATAAGAGGATTCTTGAAGAAGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAATGTACATGGTGGGAGCCCAACTTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTAATGTACGTCTGGTCTCACCTTTTTTTTTTTGGGTTCCTGCGTCTCTTGGGTATTATGGTAGTCTTGGGCTCTGATTTTCATAGTAATAGATGTGGCATTTGGGTGTTGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGATCTGCTTCGCACATGAGTGTGGTTCTTATCTTATGGTACATTTGCCAATGTAGAGGACTTATTTCGTACTTGATATGTGAATAGACGAGGTGGTATAGAAATGAATACATGGAATAATGATACAACATTTATTTTTTTCCAGTTCTTATTTATTTGTATTTGCATATATTTCACATGAATGCTGAAACTGTTCTATTTATCATTTTTCTACTTAGTCTTACTGATTTTATGAGTATGAGTGTCATGATTAACGACTTACATGTGGTTTTATAGCATGGCAAGACTCCCAGGAGTGTATACACTACAAAGAAATGTGGAAATATTTGTAATAACTTGTATGTTACACAACTAATCGTTGTATGCTTTTTTGGTGTTCTGACTTCTGTGTTCATAGCCAGCACCAGCAGTTGAATGGCTGGGATCAGTCAAAGGTAAAGCTTAAAGTGTTTTGCTTTATAGTTTAGACATATAGGTTTATTATTGTTTTAATGACTGTTTTAAGTAATATTTGTAACATCTGGCAATTGATTACAACTTGTAAATGACATTTTCTGAAGAGTGAACACTGAACGTGGATTGATATAGTAGAATCTTTGGTTTGATGCATTTTAACTTATCTTCAGAATTTTTTTGAAAGTACTCTTTTGGTGTCGATGTTTAATGATTGGAACCCTTCATTATAACCTTTTGGTTCTAAGCCTTCTCTTTTATGTACCCTGATTCTTCTTAATGAAAGTTGATTTTTTATTCTTTTTCTTCTTTTAAATTTAAACTTAAATAGAAAAGAGAAGAATGTGAACTTCCAGAGGTTTGGTTGGGGGGTGGGGGGGCGGAAGGGTTGCCTTCACCCTTCTTTCTTAAGATCCTCCTTATGCTGTAGAGATGGACTCCTGTGCCTCTCGAGTCTCGTATGTGTCTTTCATTTGATTTTTTAAAATGAATTAAGAATTGTTCTTAAAATATGTATGTCTCCACGAAAGAGAAGAAAGAAACTATGATCTAAACTTGAAAGACAGTGATGCAGCCGACAGTTTTCCTTGAATGGGTTGAAATGCCACTTTGAAGCATCTTGACAAGTGATCCATTTTTAATTTCGTTGATCTCCAGCTTCTGATTGTGATTGACTGTAATAAAGGATCATAGCATGTTTTATGCGTCTGTACTTCATTGGCAGTGGCAGGACATAGTTGCTGGAAGACAGTTTCTCGTAGTTTCTGTAATTGCTTGA

mRNA sequence

ATGGTTACTGATTCGATCACCAATGCTTCCATTTCTTTGGCTCCAAACGCCCGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAAGATGACGATCGCCTTGATTCAGTGGTCATTAAAACGAGCAAAGATGATAATCTTTCCTCTAAAAAAATAAATATGAGGGAAATAGGAGAAGAGAACGACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGCCCCCCCAGTCTTGGCAGTAGTATCTTGGGTGGTAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGTCGTAGCAGCTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGGAGATGATGATTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTGGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGGGGTAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGCACAAATGAGTTGGGCGTAGGAGATGGTGACTCAAGTATTGAACGTGGGAGAATTGCGCAGAGGGCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAGCTTAGTTTACCGAATACAGACCGGCGCTTTGGATGTGGAAGCATCCCTTGGGCGTGTAGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTGCCTTGTTTCTGTGGATTCCGGCTGTGCCTTTTCTGTCATAAGAGGATTCTTGAAGAAGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAATGTACATGGTGGGAGCCCAACTTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGCCAGCACCAGCAGTTGAATGGCTGGGATCAGTCAAAGGATCATAGCATGTTTTATGCGTCTGTACTTCATTGGCAGTGGCAGGACATAGTTGCTGGAAGACAGTTTCTCGTAGTTTCTGTAATTGCTTGA

Coding sequence (CDS)

ATGGTTACTGATTCGATCACCAATGCTTCCATTTCTTTGGCTCCAAACGCCCGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTTAGGAATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAAGATGACGATCGCCTTGATTCAGTGGTCATTAAAACGAGCAAAGATGATAATCTTTCCTCTAAAAAAATAAATATGAGGGAAATAGGAGAAGAGAACGACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGCCCCCCCAGTCTTGGCAGTAGTATCTTGGGTGGTAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGTCGTAGCAGCTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGGAGATGATGATTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTGGCCGCCACTGACAAGCAACATGATCAATGTTCCGAGTCTTCCCCTAGGGGTAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGCACAAATGAGTTGGGCGTAGGAGATGGTGACTCAAGTATTGAACGTGGGAGAATTGCGCAGAGGGCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAGCTTAGTTTACCGAATACAGACCGGCGCTTTGGATGTGGAAGCATCCCTTGGGCGTGTAGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTGCCTTGTTTCTGTGGATTCCGGCTGTGCCTTTTCTGTCATAAGAGGATTCTTGAAGAAGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAATGTACATGGTGGGAGCCCAACTTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGCCAGCACCAGCAGTTGAATGGCTGGGATCAGTCAAAGGATCATAGCATGTTTTATGCGTCTGTACTTCATTGGCAGTGGCAGGACATAGTTGCTGGAAGACAGTTTCTCGTAGTTTCTGTAATTGCTTGA

Protein sequence

MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDDDRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISSQHQQLNGWDQSKDHSMFYASVLHWQWQDIVAGRQFLVVSVIA

Homology

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BLAST of Spg022483 vs. NCBI nr
Match: TYJ98591.1 (suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 653.7 bits (1685), Expect = 1.0e-183
Identity = 326/348 (93.68%), Postives = 336/348 (96.55%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKT KDDNLSS+KINMREIGEENDRSVHHHSD+S+SPSNSPPSLGSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT-EEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT EEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD  NELGVGDGDS++ERGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCG +PWAC GV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISS 348
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISS 348

[Close]

BLAST of Spg022483 vs. NCBI nr
Match: XP_008453149.1 (PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo])

HSP 1 Score: 652.1 bits (1681), Expect = 3.0e-183
Identity = 325/347 (93.66%), Postives = 335/347 (96.54%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKT KDDNLSS+KINMREIGEENDRSVHHHSD+S+SPSNSPPSLGSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT-EEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT EEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD  NELGVGDGDS++ERGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCG +PWAC GV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 347
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of Spg022483 vs. NCBI nr
Match: KAA0057903.1 (suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 652.1 bits (1681), Expect = 3.0e-183
Identity = 325/347 (93.66%), Postives = 335/347 (96.54%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKT KDDNLSS+KINMREIGEENDRSVHHHSD+S+SPSNSPPSLGSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT-EEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT EEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD  NELGVGDGDS++ERGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCG +PWAC GV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 347
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of Spg022483 vs. NCBI nr
Match: XP_004138290.2 (uncharacterized protein LOC101211244 [Cucumis sativus] >KAE8652409.1 hypothetical protein Csa_013954 [Cucumis sativus])

HSP 1 Score: 649.8 bits (1675), Expect = 1.5e-182
Identity = 324/347 (93.37%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKT KDD+LSS+KINMREIGEENDRSVHHHSD+S+SPSNSPPSLGSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDDLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT-EEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT EEEEEEGDDDCLDDWEAIADALAATDKQHDQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNV+SQLDSCGD  NELGVGDGDSS+ERGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVISQLDSCGDRRNELGVGDGDSSVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLP TDRRFGCG + WAC GV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPTTDRRFGCGGVSWACGGVIPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 347
           CHKRILEEDGRCPGCRKPYDRDPADNETNV  GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVLAGSPTLPLARSCSMIS 347

[Close]

BLAST of Spg022483 vs. NCBI nr
Match: XP_038878939.1 (uncharacterized protein LOC120071026 [Benincasa hispida])

HSP 1 Score: 642.5 bits (1656), Expect = 2.3e-180
Identity = 322/348 (92.53%), Postives = 333/348 (95.69%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKT +DDNLSSKKINMR+IGEENDRSVH HSDFS+SPSNSPPSLGSSILGGND
Sbjct: 61  NRLDSVVIKTREDDNLSSKKINMRDIGEENDRSVHRHSDFSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT-EEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT EEEEEEGDDDCLDDWEAIADALAATDKQHDQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGDS NELGVGDGDS ++RGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDSRNELGVGDGDSGVDRGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGC-GSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCL 300
            LSKQLSLPNTDRRFGC G IPW C GV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCL
Sbjct: 241 MLSKQLSLPNTDRRFGCGGGIPWGCGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCL 300

Query: 301 FCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 347
           FCHKRI+EEDGRCPGCRKPYDRDPAD+ETNV GGSP F LARSCSMIS
Sbjct: 301 FCHKRIIEEDGRCPGCRKPYDRDPADSETNVQGGSPMFALARSCSMIS 348

[Close]

BLAST of Spg022483 vs. ExPASy Swiss-Prot
Match: O95628 (CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 2.0e-12
Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 270 PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA 324
           P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65

[Close]

BLAST of Spg022483 vs. ExPASy Swiss-Prot
Match: Q8BT14 (CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 2.0e-12
Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 270 PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA 324
           P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65

[Close]

BLAST of Spg022483 vs. ExPASy Swiss-Prot
Match: P34909 (General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.3e-10
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 273 CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD 320
           CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ YD
Sbjct: 33  CPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYD 82

[Close]

BLAST of Spg022483 vs. ExPASy Swiss-Prot
Match: Q09818 (Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.04c PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-09
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 273 CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD 322
           CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Sbjct: 18  CPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPACRRLYTEE 67

[Close]

BLAST of Spg022483 vs. ExPASy TrEMBL
Match: A0A5D3BIS7 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002110 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 4.9e-184
Identity = 326/348 (93.68%), Postives = 336/348 (96.55%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKT KDDNLSS+KINMREIGEENDRSVHHHSD+S+SPSNSPPSLGSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT-EEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT EEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD  NELGVGDGDS++ERGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCG +PWAC GV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISS 348
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISS 348

[Close]

BLAST of Spg022483 vs. ExPASy TrEMBL
Match: A0A5A7UPV5 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002030 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.4e-183
Identity = 325/347 (93.66%), Postives = 335/347 (96.54%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKT KDDNLSS+KINMREIGEENDRSVHHHSD+S+SPSNSPPSLGSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT-EEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT EEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD  NELGVGDGDS++ERGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCG +PWAC GV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 347
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of Spg022483 vs. ExPASy TrEMBL
Match: A0A1S3BVJ1 (uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.4e-183
Identity = 325/347 (93.66%), Postives = 335/347 (96.54%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKT KDDNLSS+KINMREIGEENDRSVHHHSD+S+SPSNSPPSLGSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT-EEEEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT EEEEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSPRGNVVSQLDSCGD  NELGVGDGDS++ERGRI QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPNTDRRFGCG +PWAC GV+PVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 347
           CHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of Spg022483 vs. ExPASy TrEMBL
Match: A0A6J1C357 (uncharacterized protein LOC111007016 OS=Momordica charantia OX=3673 GN=LOC111007016 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 1.1e-175
Identity = 316/346 (91.33%), Postives = 327/346 (94.51%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSITNASISLAP+ARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRGAVKNKKWNE+D
Sbjct: 1   MVTDSITNASISLAPSARDLPLPKKKRVKNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDSVVIKTSKDDNLSSKKINMREIG +N  SVHH SDFSESPSNSPPSL SSILGGND
Sbjct: 61  NRLDSVVIKTSKDDNLSSKKINMREIGGDNGGSVHHDSDFSESPSNSPPSLASSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEGDDDCLDDWEAIADALAATDKQHDQCS 180
           SGPHFTGSSSSSSCRSSSSGCRSGSIT   EEEGDDD LDDWEAIADALAATDKQHDQCS
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSIT---EEEGDDDGLDDWEAIADALAATDKQHDQCS 180

Query: 181 ESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLPT 240
           ESSPRG+ VSQLDSCGDS NELGVGDGDS +E GRIAQRA M+CRAWRPDDAFRPQSLPT
Sbjct: 181 ESSPRGDAVSQLDSCGDSRNELGVGDGDSKLECGRIAQRAPMSCRAWRPDDAFRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFC 300
           LSKQLSLPNTDRR+GCG IPWAC GVM VPTSCPICFEDLDLTDSSFLPCFCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRYGCGGIPWACGGVMSVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 347
           HKRILEEDGRCPGCRKPY+ DPAD+ETNVHGGSPT PLARSCSMIS
Sbjct: 301 HKRILEEDGRCPGCRKPYECDPADSETNVHGGSPTLPLARSCSMIS 343

[Close]

BLAST of Spg022483 vs. ExPASy TrEMBL
Match: A0A6J1JM47 (uncharacterized protein LOC111485637 OS=Cucurbita maxima OX=3661 GN=LOC111485637 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.7e-174
Identity = 310/346 (89.60%), Postives = 325/346 (93.93%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           MVTDSI NASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKWNE+D
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
           +RLDS V+KT +DDNLSSKKIN REIGEE+DRSVHHHSD SESPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEGDDDCLDDWEAIADALAATDKQHDQCS 180
           SG HFTGSSSSSSCRSSSSGCRSGSITEEEE+E DDDCL+DWEA AD L ATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 181 ESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLPT 240
           ESSPRG+VVSQL SCGDS NELGVGDGDSSIE GRIA+RASMN RAWRPDDA RPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFC 300
           LSKQLSLPNTDRRFGCGS+PWAC GV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS 347
           HKRILEEDGRCPGCRKPYDRDPADNETN H GSPTFPLARSCSMIS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMIS 346

[Close]

BLAST of Spg022483 vs. TAIR 10
Match: AT5G62910.1 (RING/U-box superfamily protein )

HSP 1 Score: 252.7 bits (644), Expect = 4.9e-67
Identity = 169/354 (47.74%), Postives = 217/354 (61.30%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           M+TDSITNAS + AP  RD    KK+  +++K+KQ+KL +RREQWLS+ AV NK+  E+ 
Sbjct: 1   MITDSITNASATSAP--RDSG-KKKRNNKSAKMKQNKLGLRREQWLSQVAVSNKEVKEER 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGND 120
                 V ++ K  + SS K+  RE       ++ HH  F ESPSNS        +GG  
Sbjct: 61  S-----VNRSQKPHHESSDKVR-REEDNNGGNNLLHHESFMESPSNSS-------VGGTY 120

Query: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEGDDD-CLDDWEAIADALAATDKQHDQC 180
           S  +F+G SS SS  SSSSG  SG+ITEEE  + DDD C+DDWEA+ADALAA ++     
Sbjct: 121 SSTNFSGRSSRSS--SSSSGFCSGNITEEENVDDDDDGCVDDWEAVADALAAEEEIE--- 180

Query: 181 SESSPRGNVVSQL-------DSCGDSTNELG--VGDGDSSIERGRIAQRASMNCRAWRPD 240
            +S P  +V  Q+       + C  S ++    VG  D   E  R++ R   + RAWR D
Sbjct: 181 KKSRPLESVKEQVSVGQSASNVCDSSISDASDVVGVEDPKQECLRVSSRKQTSNRAWRLD 240

Query: 241 DAFRPQSLPTLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPC 300
           D  RPQ LP L+KQLS P  D+RF            + +P+SCPIC+EDLDLTDS+FLPC
Sbjct: 241 DDLRPQGLPNLAKQLSFPELDKRFSS----------VAIPSSCPICYEDLDLTDSNFLPC 300

Query: 301 FCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM 345
            CGFRLCLFCHK I + DGRCPGCRKPY+R+    ET++ GG  T  LARS SM
Sbjct: 301 PCGFRLCLFCHKTICDGDGRCPGCRKPYERNMVKAETSIQGGGLTIRLARSSSM 323

[Close]

BLAST of Spg022483 vs. TAIR 10
Match: AT3G48070.1 (RING/U-box superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 7.0e-66
Identity = 167/352 (47.44%), Postives = 213/352 (60.51%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           M++DSITNAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK    D 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINK---GDK 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIG------EENDRSVHHHSDFSESPSNSPPSLGSS 120
           + ++S       +  + S+K + R++       +E++   H H  F ES SNSP    +S
Sbjct: 61  EEMES-------NRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSP----NS 120

Query: 121 ILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEGDDDCLDDWEAIADALAATDK 180
           IL G +S P+F+ SSS     S S G  SG+ITEEE+ + DD CLDDWEAIADALAA D+
Sbjct: 121 ILSGMNSIPNFSSSSS-----SGSGGSCSGNITEEEDAD-DDGCLDDWEAIADALAADDE 180

Query: 181 QHDQCS--ESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDA 240
           +H++ +  ES      + Q    G +   L     DS        +R   + +AWRPDD 
Sbjct: 181 KHEKENPPESCQEHEDIKQSALIGGADVVLRDAKADSQ-------RRKQKSNQAWRPDDK 240

Query: 241 FRPQSLPTLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFC 300
            RPQ LP L KQ S P  +  F         S V  VP+SCPIC+EDLDLTDS+FLPC C
Sbjct: 241 LRPQGLPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLPCPC 300

Query: 301 GFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM 345
           GFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM
Sbjct: 301 GFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSM 315

[Close]

BLAST of Spg022483 vs. TAIR 10
Match: AT3G48070.2 (RING/U-box superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 7.0e-66
Identity = 167/352 (47.44%), Postives = 213/352 (60.51%), Query Frame = 0


Query: 1   MVTDSITNASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEDD 60
           M++DSITNAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+ A+ NK    D 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINK---GDK 60

Query: 61  DRLDSVVIKTSKDDNLSSKKINMREIG------EENDRSVHHHSDFSESPSNSPPSLGSS 120
           + ++S       +  + S+K + R++       +E++   H H  F ES SNSP    +S
Sbjct: 61  EEMES-------NRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSP----NS 120

Query: 121 ILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEGDDDCLDDWEAIADALAATDK 180
           IL G +S P+F+ SSS     S S G  SG+ITEEE+ + DD CLDDWEAIADALAA D+
Sbjct: 121 ILSGMNSIPNFSSSSS-----SGSGGSCSGNITEEEDAD-DDGCLDDWEAIADALAADDE 180

Query: 181 QHDQCS--ESSPRGNVVSQLDSCGDSTNELGVGDGDSSIERGRIAQRASMNCRAWRPDDA 240
           +H++ +  ES      + Q    G +   L     DS        +R   + +AWRPDD 
Sbjct: 181 KHEKENPPESCQEHEDIKQSALIGGADVVLRDAKADSQ-------RRKQKSNQAWRPDDK 240

Query: 241 FRPQSLPTLSKQLSLPNTDRRFGCGSIPWACSGVMPVPTSCPICFEDLDLTDSSFLPCFC 300
            RPQ LP L KQ S P  +  F         S V  VP+SCPIC+EDLDLTDS+FLPC C
Sbjct: 241 LRPQGLPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLPCPC 300

Query: 301 GFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSM 345
           GFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM
Sbjct: 301 GFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSM 315

[Close]

BLAST of Spg022483 vs. TAIR 10
Match: AT1G74870.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-16
Identity = 85/298 (28.52%), Postives = 130/298 (43.62%), Query Frame = 0


Query: 25  KKRVRN--SKLKQSKLDVRREQWLSRGAVKNKKWNEDDDRLDSVVIKTSKDDNLSSKKIN 84
           KKR  N   KLKQ K+D RR+QW+S+    N    E   RL S++ K +   +  + +I+
Sbjct: 21  KKRKANWFCKLKQWKIDARRKQWISQWKKANVDEEEIGRRLRSLLEKLT---DQKAWRID 80

Query: 85  MREIGEENDRSVHHHSDFSESPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCR 144
             +  E+++  +   S F+ SP        +S+L   DS              S    C 
Sbjct: 81  YDD-DEDDEIDLERTSSFASSP--------TSVLKRKDS-------------VSGDCFCC 140

Query: 145 SGSITEEEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPRGNVVSQLDSCGDSTNEL 204
           S  +TEEEEE   DD  D+W+   DAL + +  +++ S          + D   D++  +
Sbjct: 141 SKQMTEEEEEV-FDDAYDNWDGFKDALNSFENDNNESSRLVTEDFEQEEEDLIPDTSQRM 200

Query: 205 GVGDGDSSIERGRIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGSIPWA 264
                       +  Q A+               ++   S +    N++++ G G     
Sbjct: 201 -----------NKCKQEAAPG----------NQTTIHRNSNKKKRSNSEKQRGDGD---- 259

Query: 265 CSGVMPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR 321
                     CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y +
Sbjct: 261 --------EECPICSELMDATDLEFEPCTCGFRICLFCHNKISENEARCPACRKDYKK 259

[Close]

BLAST of Spg022483 vs. TAIR 10
Match: AT3G45630.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.8e-11
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 272 SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD 322
           +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Sbjct: 8   TCPLCAEEMDLTDQQLKPCKCGYQICVWCWHHIMDMAEKDQSEGRCPACRTPYDKE 63

The following BLAST results are available for this feature:

BLAST of Spg022483 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98591.1	1.0e-183	93.68	suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_008453149.1	3.0e-183	93.66	PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]	[more]
KAA0057903.1	3.0e-183	93.66	suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_004138290.2	1.5e-182	93.37	uncharacterized protein LOC101211244 [Cucumis sativus] >KAE8652409.1 hypothetica...	[more]
XP_038878939.1	2.3e-180	92.53	uncharacterized protein LOC120071026 [Benincasa hispida]	[more]

BLAST of Spg022483 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O95628	2.0e-12	52.73	CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 S...	[more]
Q8BT14	2.0e-12	52.73	CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 ...	[more]
P34909	5.3e-10	50.00	General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisia...	[more]
Q09818	1.6e-09	48.00	Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharo...	[more]

BLAST of Spg022483 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIS7	4.9e-184	93.68	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7UPV5	1.4e-183	93.66	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BVJ1	1.4e-183	93.66	uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=...	[more]
A0A6J1C357	1.1e-175	91.33	uncharacterized protein LOC111007016 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1JM47	2.7e-174	89.60	uncharacterized protein LOC111485637 OS=Cucurbita maxima OX=3661 GN=LOC111485637...	[more]

BLAST of Spg022483 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62910.1	4.9e-67	47.74	RING/U-box superfamily protein	[more]
AT3G48070.1	7.0e-66	47.44	RING/U-box superfamily protein	[more]
AT3G48070.2	7.0e-66	47.44	RING/U-box superfamily protein	[more]
AT1G74870.1	1.8e-16	28.52	RING/U-box superfamily protein	[more]
AT3G45630.1	3.8e-11	42.86	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 269..330 e-value: 3.1E-18 score: 66.9
None	No IPR available	PFAM	PF14570	zf-RING_4	coord: 273..319 e-value: 2.5E-18 score: 65.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..157
None	No IPR available	PANTHER	PTHR12603:SF7	RING/U-BOX SUPERFAMILY PROTEIN	coord: 7..346
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 271..323
IPR039780	CCR4-NOT transcription complex subunit 4	PANTHER	PTHR12603	CCR4-NOT TRANSCRIPTION COMPLEX RELATED	coord: 7..346
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 273..315 score: 9.169853
IPR039515	NOT4, modified RING finger, HC subclass (C4C4-type)	CDD	cd16618	mRING-HC-C4C4_CNOT4	coord: 273..316 e-value: 7.95595E-19 score: 77.2696

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022483.1	Spg022483.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0004842	ubiquitin-protein transferase activity