Spg022449 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022449
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ethylene-responsive transcription factor
Location	scaffold2: 3981758 .. 3982426 (-)
RNA-Seq Expression	Spg022449
Synteny	Spg022449

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCACACAGAGCTCCAAACCTTCACCTCAACCTCCAAATCCTTTCAATTCCAACACCCAACCAACAACTGACCATAACCAAGAGATCAGCCATGGCAGAACAAGGTTTCTGGGAGTGAGACAGCGCCCCTCTGGAAGATGGGTTGCAGAGATCAAAGTCTCCTCACAGAAGCTTAGGCTATGGCTTGGCACTTTCGACAGAGCAGAAGATGCTGCCATGGCTTATGACAGAGCTGCAAGGCTTCTCAGAGGAAGATCTGCAAAGACAAACTTCCCATATGATCACCATCATGGCTTCTTCAATTCCACCATTAATGAACAAGCTCGCTCCCTGTTTGGACACAGTCCCAAGCTCTGCCGTCTGCTTCAACATGCCATCATGAAGAACAGAAGCCGTTCGAGATCAACCACTGCTGATTATCATGATGATCAGCAGCAGCAGCCAAAGATAAATAATGGGTTTATTGATTCGGTTGTTGAAGATACTATTTTCTGTTCTTCTACTACGAATTTGTCTGAAAGTAATAAAGGATGTGGGTTCTATTTTGGGAGTTCGAAAGTTTATACTTCTGTGTTTGTAGCTCCTTCTTTTAGCTCTGATGTGAGAAGTGAAGTAGAAGAAGGAGAGATGATGAATCCATCGTCCATGGAAGCTTTGATTTAG

mRNA sequence

ATGGCCGCCACACAGAGCTCCAAACCTTCACCTCAACCTCCAAATCCTTTCAATTCCAACACCCAACCAACAACTGACCATAACCAAGAGATCAGCCATGGCAGAACAAGGTTTCTGGGAGTGAGACAGCGCCCCTCTGGAAGATGGGTTGCAGAGATCAAAGTCTCCTCACAGAAGCTTAGGCTATGGCTTGGCACTTTCGACAGAGCAGAAGATGCTGCCATGGCTTATGACAGAGCTGCAAGGCTTCTCAGAGGAAGATCTGCAAAGACAAACTTCCCATATGATCACCATCATGGCTTCTTCAATTCCACCATTAATGAACAAGCTCGCTCCCTGTTTGGACACAGTCCCAAGCTCTGCCGTCTGCTTCAACATGCCATCATGAAGAACAGAAGCCGTTCGAGATCAACCACTGCTGATTATCATGATGATCAGCAGCAGCAGCCAAAGATAAATAATGGGTTTATTGATTCGGTTGTTGAAGATACTATTTTCTGTTCTTCTACTACGAATTTGTCTGAAAGTAATAAAGGATGTGGGTTCTATTTTGGGAGTTCGAAAGTTTATACTTCTGTGTTTGTAGCTCCTTCTTTTAGCTCTGATGTGAGAAGTGAAGTAGAAGAAGGAGAGATGATGAATCCATCGTCCATGGAAGCTTTGATTTAG

Coding sequence (CDS)

ATGGCCGCCACACAGAGCTCCAAACCTTCACCTCAACCTCCAAATCCTTTCAATTCCAACACCCAACCAACAACTGACCATAACCAAGAGATCAGCCATGGCAGAACAAGGTTTCTGGGAGTGAGACAGCGCCCCTCTGGAAGATGGGTTGCAGAGATCAAAGTCTCCTCACAGAAGCTTAGGCTATGGCTTGGCACTTTCGACAGAGCAGAAGATGCTGCCATGGCTTATGACAGAGCTGCAAGGCTTCTCAGAGGAAGATCTGCAAAGACAAACTTCCCATATGATCACCATCATGGCTTCTTCAATTCCACCATTAATGAACAAGCTCGCTCCCTGTTTGGACACAGTCCCAAGCTCTGCCGTCTGCTTCAACATGCCATCATGAAGAACAGAAGCCGTTCGAGATCAACCACTGCTGATTATCATGATGATCAGCAGCAGCAGCCAAAGATAAATAATGGGTTTATTGATTCGGTTGTTGAAGATACTATTTTCTGTTCTTCTACTACGAATTTGTCTGAAAGTAATAAAGGATGTGGGTTCTATTTTGGGAGTTCGAAAGTTTATACTTCTGTGTTTGTAGCTCCTTCTTTTAGCTCTGATGTGAGAAGTGAAGTAGAAGAAGGAGAGATGATGAATCCATCGTCCATGGAAGCTTTGATTTAG

Protein sequence

MAATQSSKPSPQPPNPFNSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNFPYDHHHGFFNSTINEQARSLFGHSPKLCRLLQHAIMKNRSRSRSTTADYHDDQQQQPKINNGFIDSVVEDTIFCSSTTNLSESNKGCGFYFGSSKVYTSVFVAPSFSSDVRSEVEEGEMMNPSSMEALI

Homology

[Close]

BLAST of Spg022449 vs. NCBI nr
Match: XP_038878811.1 (ethylene-responsive transcription factor ERN1-like [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 2.1e-77
Identity = 171/211 (81.04%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 1   MAATQSSKPSPQPPNPFNSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKL 60
           MAATQSS PS QPPNP NSN      +NQEI+HGR RFLGVRQRPSGRWVAEIKVSSQKL
Sbjct: 1   MAATQSSNPSSQPPNPLNSN-----PNNQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKL 60

Query: 61  RLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNFPY-DHHHGFFN-STIN-EQARSLFGHS 120
           RLWLGTF+RAEDAAMAYDRAARLLRGRSAKTNFPY DH HGFFN STIN EQ+RSLFGHS
Sbjct: 61  RLWLGTFNRAEDAAMAYDRAARLLRGRSAKTNFPYDDHDHGFFNSSTINEEQSRSLFGHS 120

Query: 121 PKLCRLLQHAIMKNRSRSRSTTADYHDDQQQQPKINNGFIDSVVEDTIFCSSTT---NLS 180
           PKLCRLLQHAIMKNRSR RS TADY    QQQ   NNG IDSVVEDTIFCSST    N +
Sbjct: 121 PKLCRLLQHAIMKNRSRLRS-TADY----QQQITRNNGLIDSVVEDTIFCSSTNLVENKN 180

Query: 181 ESNK--GCGFYFGSSKVYTSVFVAPSFSSDV 204
           ++NK  GCGF FG SKVYTSVFVAPSFSSDV
Sbjct: 181 DNNKGCGCGFSFGGSKVYTSVFVAPSFSSDV 201

[Close]

BLAST of Spg022449 vs. NCBI nr
Match: XP_031737158.1 (ethylene-responsive transcription factor ERN2 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 1.6e-69
Identity = 154/198 (77.78%), Postives = 162/198 (81.82%), Query Frame = 0


Query: 18  NSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAY 77
           NS++ P    NQEI+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAAMAY
Sbjct: 4   NSSSLPP---NQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAMAY 63

Query: 78  DRAARLLRGRSAKTNFPYDHHHGFFNSTIN-EQARSLFGHSPKLCRLLQHAIMKNRSRSR 137
           DRAARLLRGRSAKTNF YD+HHGFFNSTIN EQ  SLF HSPKLCRLLQHA+MKNRSR  
Sbjct: 64  DRAARLLRGRSAKTNFSYDYHHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRLI 123

Query: 138 STT-ADYHD---DQQQQPKINNGFIDSVVEDTIFCSST----TNLSESNK--GCGFYFGS 197
           STT   YH     QQQQ   NNG IDSVVEDTIFCSST     N + SNK  GCGF FG 
Sbjct: 124 STTDHQYHHRRRHQQQQISRNNGGIDSVVEDTIFCSSTNLVENNNNSSNKGCGCGFSFGG 183

Query: 198 SKVYTSVFVAPSFSSDVR 205
           SKVYTSVFVAPSFSSDV+
Sbjct: 184 SKVYTSVFVAPSFSSDVQ 198

[Close]

BLAST of Spg022449 vs. NCBI nr
Match: XP_016901366.1 (PREDICTED: ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo] >KAA0058038.1 ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 9.0e-68
Identity = 151/201 (75.12%), Postives = 162/201 (80.60%), Query Frame = 0


Query: 18  NSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAY 77
           NS++QP    NQEI+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+AY
Sbjct: 4   NSSSQPP---NQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALAY 63

Query: 78  DRAARLLRGRSAKTNFPYDHHHGFFNSTIN-EQARSLFGHSPKLCRLLQHAIMKNRSRSR 137
           DRAARLLRGRSAKTNF YD+ HGFFNSTIN EQ  SLF HSPKLCRLLQHA+MKNRSR  
Sbjct: 64  DRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRLI 123

Query: 138 STT-ADYHDDQQQQPKI--NNGFIDSVVEDTIFCSST---------TNLSESNK--GCGF 197
           STT   YH  ++ Q +I  NNG IDSVVEDTIFCSST          N + SNK  GCGF
Sbjct: 124 STTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNSNKGCGCGF 183

Query: 198 YFGSSKVYTSVFVAPSFSSDV 204
            FG SKVYTSVFVAPSFSSDV
Sbjct: 184 SFGGSKVYTSVFVAPSFSSDV 201

[Close]

BLAST of Spg022449 vs. NCBI nr
Match: TYK11541.1 (ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-67
Identity = 152/205 (74.15%), Postives = 162/205 (79.02%), Query Frame = 0


Query: 18  NSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAY 77
           NS++QP    NQEI+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+AY
Sbjct: 4   NSSSQPP---NQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALAY 63

Query: 78  DRAARLLRGRSAKTNFPYDHHHGFFNSTIN-EQARSLFGHSPKLCRLLQHAIMKNRSRSR 137
           DRAARLLRGRSAKTNF YD+ HGFFNSTIN EQ  SLF HSPKLCRLLQHA+MKNRSR  
Sbjct: 64  DRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRLI 123

Query: 138 STT-ADYHDDQQQQPKI--NNGFIDSVVEDTIFCSST-------------TNLSESNK-- 197
           STT   YH  ++ Q +I  NNG IDSVVEDTIFCSST              N S SNK  
Sbjct: 124 STTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNNNSNSNKGC 183

Query: 198 GCGFYFGSSKVYTSVFVAPSFSSDV 204
           GCGF FG SKVYTSVFVAPSFSSDV
Sbjct: 184 GCGFSFGGSKVYTSVFVAPSFSSDV 205

[Close]

BLAST of Spg022449 vs. NCBI nr
Match: XP_022134768.1 (ethylene-responsive transcription factor 11-like [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 9.3e-65
Identity = 153/220 (69.55%), Postives = 168/220 (76.36%), Query Frame = 0


Query: 1   MAATQSSKPSPQPPNPFNSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKL 60
           MAATQSSK SP        +  P T+H     HGR RFLGVRQRPSGRWVAEIKVSSQKL
Sbjct: 1   MAATQSSKSSP--------DQLPITEH-----HGRRRFLGVRQRPSGRWVAEIKVSSQKL 60

Query: 61  RLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNFPYDHH-HGFFNSTINEQARSLFGHSPK 120
           RLWLGTFDRAEDAAMAYDRAARLLRG +AKTNFPYDHH HG F++     + ++FGHSPK
Sbjct: 61  RLWLGTFDRAEDAAMAYDRAARLLRGTNAKTNFPYDHHVHGSFSN-----SSTIFGHSPK 120

Query: 121 LCRLLQHAIMKNRSRSRSTTADYHDDQQQQPKINNGFIDSVVEDTIFCSSTTNLS--ESN 180
           L RLLQ AIMKNR+    +TAD  D  QQQP  + GF DSVVEDTIFCSST N S  E+ 
Sbjct: 121 LYRLLQLAIMKNRNSRPRSTAD--DHLQQQPSRSIGFTDSVVEDTIFCSSTNNHSSCENY 180

Query: 181 KGCGFYFGSSKVYTSVFVAPSFSS-DVRSEVE-EGEMMNP 216
           +GCGF FG SKVYTSVFVAPSFSS DVRSEVE  G+ +NP
Sbjct: 181 RGCGFSFGGSKVYTSVFVAPSFSSDDVRSEVELAGDQVNP 200

[Close]

BLAST of Spg022449 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.0e-18
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 21  TQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRA 80
           T P     ++    +T+F+GVRQRPSG+WVAEIK ++QK+R+WLGTF+ AE+AA AYD A
Sbjct: 5   TTPKQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEA 64

Query: 81  ARLLRGRSAKTNFPYDHHHGFFNSTINEQARSL 114
           A LLRG + +TNF    +H   NS ++ + R+L
Sbjct: 65  ACLLRGSNTRTNFA---NHFPNNSQLSLKIRNL 94

[Close]

BLAST of Spg022449 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.8e-18
Identity = 62/163 (38.04%), Postives = 89/163 (54.60%), Query Frame = 0


Query: 32  SHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGRSAKT 91
           S+   +F+GVRQRPSGRWVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG + +T
Sbjct: 33  SNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRT 92

Query: 92  NFPYDHHHGFFNSTINEQARSLFGHSPKLCRLLQHAIMKNRSRSRST-----TADYHDDQ 151
           NF     H   +S +  + R+L  +     +    A+    S S++T     T   +DD 
Sbjct: 93  NF---ITHVSLDSPLASRIRNLLNNRKGDKKQEDGAVASAPSNSKTTISNTSTITSNDDN 152

Query: 152 QQQ------PKINNGFIDSVVEDTIFCSST-TNLSESNKGCGF 183
           ++        +    F D+   D   C     + S+SN  CGF
Sbjct: 153 KESTLSTCATRNTELFEDAYKPDLSNCKEVFESGSQSNISCGF 192

[Close]

BLAST of Spg022449 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 0


Query: 32  SHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGRSAKT 91
           S  R +F+GVRQRPSGR+VAEIK ++Q +R+WLGTF+ AE+AA AYD AA LLRG   +T
Sbjct: 27  SETRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAEEAARAYDEAATLLRGSKTRT 86

Query: 92  NFPYDHHHGFFNSTINEQARSLFGHSPKLCRLLQHAIMKNRSRSRSTTADYHDDQQQQPK 151
           NF     H  ++S +  + R L  +  K  +      + + +    TT D   D      
Sbjct: 87  NFV---THVSYDSPLASRIRHLLNNRKKGTKQQDMNGISSTTSHADTTNDTTSDGSTSST 146

Query: 152 IN-----NGFIDSVVEDTIFCSSTTNLSESNKG 180
            N     +G I+S     +  S++TN+S S  G
Sbjct: 147 TNCIGTASGAINSTSASGV-TSTSTNISTSASG 175

[Close]

BLAST of Spg022449 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-17
Identity = 40/57 (70.18%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 37 RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNF 94
          +F+GVRQRPSGRWVAEIK ++QK+R+WLGTF+ AE+AA AYD AA LLRG + +TNF
Sbjct: 34 KFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 90

[Close]

BLAST of Spg022449 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.8e-17
Identity = 45/67 (67.16%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 37  RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNF--P 96
           RF GVR+RP GR+ AEI+   +K R+WLGTFD AEDAA AYD AAR LRG  AKTNF  P
Sbjct: 27  RFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLP 86

Query: 97  YDHHHGF 102
           Y HHH F
Sbjct: 87  YAHHHQF 93

[Close]

BLAST of Spg022449 vs. ExPASy TrEMBL
Match: A0A0A0LPP4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015755 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 7.9e-70
Identity = 154/198 (77.78%), Postives = 162/198 (81.82%), Query Frame = 0


Query: 18  NSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAY 77
           NS++ P    NQEI+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAAMAY
Sbjct: 4   NSSSLPP---NQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAMAY 63

Query: 78  DRAARLLRGRSAKTNFPYDHHHGFFNSTIN-EQARSLFGHSPKLCRLLQHAIMKNRSRSR 137
           DRAARLLRGRSAKTNF YD+HHGFFNSTIN EQ  SLF HSPKLCRLLQHA+MKNRSR  
Sbjct: 64  DRAARLLRGRSAKTNFSYDYHHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRLI 123

Query: 138 STT-ADYHD---DQQQQPKINNGFIDSVVEDTIFCSST----TNLSESNK--GCGFYFGS 197
           STT   YH     QQQQ   NNG IDSVVEDTIFCSST     N + SNK  GCGF FG 
Sbjct: 124 STTDHQYHHRRRHQQQQISRNNGGIDSVVEDTIFCSSTNLVENNNNSSNKGCGCGFSFGG 183

Query: 198 SKVYTSVFVAPSFSSDVR 205
           SKVYTSVFVAPSFSSDV+
Sbjct: 184 SKVYTSVFVAPSFSSDVQ 198

[Close]

BLAST of Spg022449 vs. ExPASy TrEMBL
Match: A0A5A7USB5 (Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003430 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.3e-68
Identity = 151/201 (75.12%), Postives = 162/201 (80.60%), Query Frame = 0


Query: 18  NSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAY 77
           NS++QP    NQEI+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+AY
Sbjct: 4   NSSSQPP---NQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALAY 63

Query: 78  DRAARLLRGRSAKTNFPYDHHHGFFNSTIN-EQARSLFGHSPKLCRLLQHAIMKNRSRSR 137
           DRAARLLRGRSAKTNF YD+ HGFFNSTIN EQ  SLF HSPKLCRLLQHA+MKNRSR  
Sbjct: 64  DRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRLI 123

Query: 138 STT-ADYHDDQQQQPKI--NNGFIDSVVEDTIFCSST---------TNLSESNK--GCGF 197
           STT   YH  ++ Q +I  NNG IDSVVEDTIFCSST          N + SNK  GCGF
Sbjct: 124 STTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNSNKGCGCGF 183

Query: 198 YFGSSKVYTSVFVAPSFSSDV 204
            FG SKVYTSVFVAPSFSSDV
Sbjct: 184 SFGGSKVYTSVFVAPSFSSDV 201

[Close]

BLAST of Spg022449 vs. ExPASy TrEMBL
Match: A0A1S4DZE7 (ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494092 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.3e-68
Identity = 151/201 (75.12%), Postives = 162/201 (80.60%), Query Frame = 0


Query: 18  NSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAY 77
           NS++QP    NQEI+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+AY
Sbjct: 4   NSSSQPP---NQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALAY 63

Query: 78  DRAARLLRGRSAKTNFPYDHHHGFFNSTIN-EQARSLFGHSPKLCRLLQHAIMKNRSRSR 137
           DRAARLLRGRSAKTNF YD+ HGFFNSTIN EQ  SLF HSPKLCRLLQHA+MKNRSR  
Sbjct: 64  DRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRLI 123

Query: 138 STT-ADYHDDQQQQPKI--NNGFIDSVVEDTIFCSST---------TNLSESNK--GCGF 197
           STT   YH  ++ Q +I  NNG IDSVVEDTIFCSST          N + SNK  GCGF
Sbjct: 124 STTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNSNKGCGCGF 183

Query: 198 YFGSSKVYTSVFVAPSFSSDV 204
            FG SKVYTSVFVAPSFSSDV
Sbjct: 184 SFGGSKVYTSVFVAPSFSSDV 201

[Close]

BLAST of Spg022449 vs. ExPASy TrEMBL
Match: A0A5D3CI83 (Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37291G00010 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 5.7e-68
Identity = 152/205 (74.15%), Postives = 162/205 (79.02%), Query Frame = 0


Query: 18  NSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAY 77
           NS++QP    NQEI+HGR RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTF+RAEDAA+AY
Sbjct: 4   NSSSQPP---NQEINHGRRRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAALAY 63

Query: 78  DRAARLLRGRSAKTNFPYDHHHGFFNSTIN-EQARSLFGHSPKLCRLLQHAIMKNRSRSR 137
           DRAARLLRGRSAKTNF YD+ HGFFNSTIN EQ  SLF HSPKLCRLLQHA+MKNRSR  
Sbjct: 64  DRAARLLRGRSAKTNFSYDYDHGFFNSTINQEQTPSLFEHSPKLCRLLQHALMKNRSRLI 123

Query: 138 STT-ADYHDDQQQQPKI--NNGFIDSVVEDTIFCSST-------------TNLSESNK-- 197
           STT   YH  ++ Q +I  NNG IDSVVEDTIFCSST              N S SNK  
Sbjct: 124 STTDHQYHHRRRHQQQISRNNGGIDSVVEDTIFCSSTNLVENDNNNNNNNNNNSNSNKGC 183

Query: 198 GCGFYFGSSKVYTSVFVAPSFSSDV 204
           GCGF FG SKVYTSVFVAPSFSSDV
Sbjct: 184 GCGFSFGGSKVYTSVFVAPSFSSDV 205

[Close]

BLAST of Spg022449 vs. ExPASy TrEMBL
Match: A0A6J1C2Y6 (ethylene-responsive transcription factor 11-like OS=Momordica charantia OX=3673 GN=LOC111006959 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.5e-65
Identity = 153/220 (69.55%), Postives = 168/220 (76.36%), Query Frame = 0


Query: 1   MAATQSSKPSPQPPNPFNSNTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKL 60
           MAATQSSK SP        +  P T+H     HGR RFLGVRQRPSGRWVAEIKVSSQKL
Sbjct: 1   MAATQSSKSSP--------DQLPITEH-----HGRRRFLGVRQRPSGRWVAEIKVSSQKL 60

Query: 61  RLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNFPYDHH-HGFFNSTINEQARSLFGHSPK 120
           RLWLGTFDRAEDAAMAYDRAARLLRG +AKTNFPYDHH HG F++     + ++FGHSPK
Sbjct: 61  RLWLGTFDRAEDAAMAYDRAARLLRGTNAKTNFPYDHHVHGSFSN-----SSTIFGHSPK 120

Query: 121 LCRLLQHAIMKNRSRSRSTTADYHDDQQQQPKINNGFIDSVVEDTIFCSSTTNLS--ESN 180
           L RLLQ AIMKNR+    +TAD  D  QQQP  + GF DSVVEDTIFCSST N S  E+ 
Sbjct: 121 LYRLLQLAIMKNRNSRPRSTAD--DHLQQQPSRSIGFTDSVVEDTIFCSSTNNHSSCENY 180

Query: 181 KGCGFYFGSSKVYTSVFVAPSFSS-DVRSEVE-EGEMMNP 216
           +GCGF FG SKVYTSVFVAPSFSS DVRSEVE  G+ +NP
Sbjct: 181 RGCGFSFGGSKVYTSVFVAPSFSSDDVRSEVELAGDQVNP 200

[Close]

BLAST of Spg022449 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-19
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 21  TQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRA 80
           T P     ++    +T+F+GVRQRPSG+WVAEIK ++QK+R+WLGTF+ AE+AA AYD A
Sbjct: 5   TTPKQKTKEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEA 64

Query: 81  ARLLRGRSAKTNFPYDHHHGFFNSTINEQARSL 114
           A LLRG + +TNF    +H   NS ++ + R+L
Sbjct: 65  ACLLRGSNTRTNFA---NHFPNNSQLSLKIRNL 94

[Close]

BLAST of Spg022449 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 20 NTQPTTDHNQEISHGRTRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDR 79
          NT  +    ++     TRFLGVR+RP GR+ AEI+  + K R WLGTFD AE+AA+AYDR
Sbjct: 2  NTTSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDR 61

Query: 80 AARLLRGRSAKTNFPY 96
          AAR +RG  A+TNF Y
Sbjct: 62 AARSMRGTRARTNFVY 77

[Close]

BLAST of Spg022449 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.5e-16
Identity = 49/96 (51.04%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 37  RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNFPYD 96
           +F GVRQR  G WV+EI+    K R+WLGTFD AE AA AYD+AA L+ G+SAKTNFP  
Sbjct: 6   KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVI 65

Query: 97  HHHGFFNSTINEQARSLFGHSPK-LCRLLQHAIMKN 132
             +G  +  IN   R     SPK L  LL   + KN
Sbjct: 66  KSNGSNSLEINSALR-----SPKSLSELLNAKLRKN 96

[Close]

BLAST of Spg022449 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 0


Query: 37 RFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNFPYD 96
          RF GVR+RP GR+ AEI+   +K R+WLGTFD AE+AA AYD AAR LRG  AKTNFP D
Sbjct: 27 RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPID 86

[Close]

BLAST of Spg022449 vs. TAIR 10
Match: AT4G39780.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 38  FLGVRQRPSGRWVAEIKVSSQKLRLWLGTFDRAEDAAMAYDRAARLLRGRSAKTNFP-YD 97
           + GVRQR  G+WVAEI++   + RLWLGTFD AE+AAMAYD AA  LRG  A+ NFP + 
Sbjct: 93  YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFR 152

Query: 98  HHHGFF--NSTINEQARSLFGHSPKLCRLLQ 126
           H  G++   S  N    S+     ++C+ L+
Sbjct: 153 HEDGYYGGGSCFNPLHSSVDAKLQEICQSLR 183

The following BLAST results are available for this feature:

BLAST of Spg022449 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878811.1	2.1e-77	81.04	ethylene-responsive transcription factor ERN1-like [Benincasa hispida]	[more]
XP_031737158.1	1.6e-69	77.78	ethylene-responsive transcription factor ERN2 [Cucumis sativus]	[more]
XP_016901366.1	9.0e-68	75.12	PREDICTED: ethylene-responsive transcription factor ERF087-like isoform X1 [Cucu...	[more]
TYK11541.1	1.2e-67	74.15	ethylene-responsive transcription factor ERF087-like isoform X1 [Cucumis melo va...	[more]
XP_022134768.1	9.3e-65	69.55	ethylene-responsive transcription factor 11-like [Momordica charantia]	[more]

BLAST of Spg022449 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6J9S1	4.0e-18	50.54	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702...	[more]
A2Q5W1	6.8e-18	38.04	Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=...	[more]
A9Y0K8	1.5e-17	38.56	Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=...	[more]
A0A1X9PY88	5.7e-17	70.18	Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN...	[more]
Q9SXS8	9.8e-17	67.16	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]

BLAST of Spg022449 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPP4	7.9e-70	77.78	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015755 PE=...	[more]
A0A5A7USB5	4.3e-68	75.12	Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]
A0A1S4DZE7	4.3e-68	75.12	ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]
A0A5D3CI83	5.7e-68	74.15	Ethylene-responsive transcription factor ERF087-like isoform X1 OS=Cucumis melo ...	[more]
A0A6J1C2Y6	4.5e-65	69.55	ethylene-responsive transcription factor 11-like OS=Momordica charantia OX=3673 ...	[more]

BLAST of Spg022449 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19790.1	2.8e-19	50.54	related to AP2 11	[more]
AT5G13910.1	2.2e-16	55.26	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	6.5e-16	51.04	Integrase-type DNA-binding superfamily protein	[more]
AT1G50640.1	1.1e-15	66.67	ethylene responsive element binding factor 3	[more]
AT4G39780.1	1.1e-15	47.25	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 38..49 score: 52.42 coord: 60..76 score: 61.93
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 37..100 e-value: 5.7E-34 score: 128.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 38..86 e-value: 6.0E-11 score: 42.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 37..94 score: 19.269197
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 36..96 e-value: 1.63666E-31 score: 108.128
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 36..96 e-value: 1.8E-23 score: 84.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR31194:SF82	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110-LIKE	coord: 15..207
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 15..207
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 38..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022449.1	Spg022449.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity