Spg022397 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022397
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 14981471 .. 14985073 (-)
RNA-Seq Expression	Spg022397
Synteny	Spg022397

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCGCCTTCAGCCTCACGCGGTCGCCTTCCTCCGCCGCACGCAAGCGGCCGCCGCCGGTAATGTCTCTCTCTCTCTCTCTTGTTTTCGTCTCTCTCTAACCCGTCTCCCTCTCACTCTCTCAGCTCTCTCTCTCTCTTCCTCGCAGCCCTCTCTCTCTCCGTCTGCAACCTGTCGACCGCGCGCCGCCGTCACCCACGCCGCTGCCGCTCGCCGACGATCCGTGCGCCGCCGCCTCCCCGATTTCAGATCTGCACGCTGCCGCCATCTCGCCGCCGTGAACCGCCGCTATTCGTCGTCTCCTGAAGCGTCGTCGCAGCCACGAGGCCACTGCCACCCCCGGTTTCGTCTGTCGTTTCAGATCTATTCGACGCCTTCAGCTAGTGGGTAAGGAGTTTGTAAGTGTGATTTAAGGGGGTGTTGGTCGATTTAATGTTTAATTAAGGATACCCACTGATTTTAGCTTTCGATTTCAAGGTGCCCGTAGCGTTTGGAGGTCGAGTTGTCGAAGTTGATCGACTTTGAACGGTTGGACAGCAAGCGATGTTTCTGTTTTGGGTGGATTTGAGAGCCCGGACAGCAAGCTAAGTTTATGCTTTGGTTGCTTGAAGTCTTGGAATTTAAAGGAAAATTGGTTAGAAGCCGATCAAGGATTTGTTGGGCTAGGTAAGTAGTTTTCTTTGGTTTATGTCGTATGCTTTGGAATCATGTGTTCATTATGTCACCATGCTAGCATGAGATAAGTATGAATGGTTAGCCTTAAAGTTGGGGAACATGATTGTTATGCTTTTGACCCGCTGCGCGATTGATAGTTGATATGTAGCCTTTGTTTGGGTTTTCATGCTCTAGTTTATTTTTCTTTGGAATTTATCATGCTTGCGTGGACAAGATTTAAGCATCAATCTTTACTTGTGGAATGTAAATGGGCATGATGAGCTTCTTTTCAAGGCATGTCAATATGTGGTAATCTCGATATTCGCTATGACATATTTACTTTTGTATGGTTGGTTGGATAATCTATGGCTTGCCTTAGTGTAAGATAATGGAGGATGGGATTAAATGGTTGTTGGAGTTGTGAATGGTTTGTGTATGCGAGGTCTGGCTCGTTATGGTTATAGGAGTGTATATTCTTATTTTCAGGTGCAAGGAAAAATTTTGGGTTCCCTCTGCGTATGCCGTTATGCTGCCGAATTTTCGGTAGCCTCATGACGGCTTAGGAATCATATTTACCTTGAGGGAAATGATTAGGAAAGAGAAAGGAATAGGCTAGTGCCTTAGACGAGGGTCGTGTCAATTAAACACCTAGGACTGAGATGTAATAGACTGAAATGAGGGGCTTAATGGGCGGGACTTGGCTTCGCAGTCTAGGTGCCATTTACTAACTGTGGAAGTAAATTCCTGACTTAAACCCATGAACGCCCCACCAGTGAAATGGTAGCTTAGAGCGCTACGCGCCCATTAGTGCCTTGAGGGATGAGACTTAGCTCCTCTGACTGGGTGCCATCTACCATCAGTAGGAGTAGAGACCTCCCAAAACTCCCACATGTGCACTATCAGTGAGTTGGCAAACTTATGTATATATATAGGTGTACCAATTGAACACGAGACCCGAACTGCAGATAAATGAAATGAAATGAAATGAAATGAAATGAAATGAATGAGATTGAGATGACCTAACCCTTAGGCCCTTAACTCGAATAAAATGTTAAAACCTTGATTGCTACTTACTGAGTATTTTCTTAAATACTCATTCTTTTCCCTTACATTTAACTGCAGGAAGAGGTAAAGGTGTACAGAACGCGTGACGGAGTGCTGCTGAGCCATGGGTTTCTTTAGATTAGTCTTCCGCATTTTTTTTTTTTATGTTTCGAAATGCTTCTTTTGAACTTGTACAGCGTTGTTTTAAGGTCATTTCCGCGTTAGGTTTCGTTTGAATAACTAAAGGTTTCGTTTCTTCCGTTTTAACTGGGATCCCAGGTTGAAAGTTTTCGCAAAATTTCTAAGTATGTTTTCCTTTAAATGTTATTTCCTCGCTGTTCTTAGAAGTAGAACGAAATGCATGTAGTAGCGGCCTTAGGGTCTAGGCATGAAAAGTAGGGTCGTTACAGTTTGTTTCAAAAATACCCCTAAACTTTAAAAAGTTTCACAAATATCCCTGAACTTTGAAAAATGTTTCAAAAATACTCTTACCGTTAATTTTGAATGGAAACCGTTAAAGTTTCAGTTTCAAAAATATCAACTTTTAAAAAAAAAATTCAAAAATACCCTTATTGAAAAATGCTTCTTTTTTTTTTTTTCCTTCTCCTACCTTAAATTAATTATTCCTCCATGAAAAATATTAATGAGAAACTTTACTTATTTGTCATGTATTCATAATCTAAGAGATTTTCTTCTCTTTCAACACATCCCAAGAACTTGACTAGACTTTCGTGTTGAAACTTTAAGATGACTTTTGTTTTGTTATTGAAATTCTACATGTGCTTGACTTCATTTGTTGGTAGCCTTTTCAATATTATTTCTTGATGTGGAAATTTTCCTACCGCAAGCGCACGGGTCAAGTAATAATAAAGTGATTGTGAAATCGAGTGTCGTCCTTTGGATTGGCTTTTTAATCAATTTTAATTACTGAAAATAGTCTTGTCCAATTTTATTTAGGGAACCAAACGAAGTAAGAATGGATGCAAAATCTAACACAATAAACAACAAAAAGTATGACAATCTAATGGAGATGACGGTCTTAGGGATTTGATTTCACCAATTGGGATTATGGATTAATTCATGGATTAATGACATGCTATGATTCATAAATCTTGGGAAACTAAAATCACACATATCTCTCCCGAGCATACATGATTCTCCCACATGCAATGAACCCGATATCCCTATCTAAATTCATTAAACTTGCAAGGCATTAAGGCTAACCTTTTTAACGATTTGTAGAGTTAACTATTATCTCCCGATTTCTAGCTAAATCCTAGTTATGCATAATGAGTTCTAAGCTAAATCCTCTCTCCCGAGTTAGATTTAATCACAATCAACATTCAATTCATGGCCGGTAAATTGAAAGCATTAAACATACATTATGCATAAATGAAATCAATAGCATAAAACCATAAAATCAATCCATAAAGTGCCCAATGGCAACATCAATCCCTAAGAATTAAACTTAGCTACACATAATCCACGGTACAATATAACTAAGTCTAAATAAGCCATAAAAACTACTAAAGAAAAGGGAAAAGAGAAGTAAACACTAAGTAGGCCGAGACCGCACGTCCCCATCACGATCTCTACGAACAAAGCCTTCAAATCCCTTTTTCTCCACTTGCTTCAGCCTTCACAGCCACCAATTTCCTCTGTTTTACGGCTCCAAATCGTCCAAAAGAAGTCCCCACGGCTGACCTAATCGCAAAATACTTATAGGCTGAAAATTGGTCGTAGCGTCGCGACACTATAGGGGTAGCGTCGCGACGCTACCACGAAATCACAGATTCTGGGATTGCGAATCTCACAGCGACGAGACGCTGTGACCTTTTGCCGCCTATTCCAGATAAGGCAAGGCAGCGTCGAGACGCTCAAGAAGCAGCGTCCCGACGCTAG

mRNA sequence

ATGCCGCCGCCTTCAGCCTCACGCGGTCGCCTTCCTCCGCCGCACGCAAGCGGCCGCCGCCGCCCTCTCTCTCTCCGTCTGCAACCTGTCGACCGCGCGCCGCCGTCACCCACGCCGCTGCCGCTCGCCGACGATCCGTGCGCCGCCGCCTCCCCGATTTCAGATCTGCACGCTGCCGCCATCTCGCCGCCATCTATTCGACGCCTTCAGCTAGTGGCAAGCGATGTTTCTGTTTTGGGTGGATTTGAGAGCCCGGACAGCAAGCTAAGTTTATGCTTTGGTTGCTTGAAGTCTTGGAATTTAAAGGAAAATTGGTTAGAAGCCGATCAAGGATTTGTTGGGCTAGGAAGAGGGGTAGCGTCGCGACGCTACCACGAAATCACAGATTCTGGGATTGCGAATCTCACAGCGACGAGACGCTGTGACCTTTTGCCGCCTATTCCAGATAAGGCAAGGCAGCGTCGAGACGCTCAAGAAGCAGCGTCCCGACGCTAG

Coding sequence (CDS)

ATGCCGCCGCCTTCAGCCTCACGCGGTCGCCTTCCTCCGCCGCACGCAAGCGGCCGCCGCCGCCCTCTCTCTCTCCGTCTGCAACCTGTCGACCGCGCGCCGCCGTCACCCACGCCGCTGCCGCTCGCCGACGATCCGTGCGCCGCCGCCTCCCCGATTTCAGATCTGCACGCTGCCGCCATCTCGCCGCCATCTATTCGACGCCTTCAGCTAGTGGCAAGCGATGTTTCTGTTTTGGGTGGATTTGAGAGCCCGGACAGCAAGCTAAGTTTATGCTTTGGTTGCTTGAAGTCTTGGAATTTAAAGGAAAATTGGTTAGAAGCCGATCAAGGATTTGTTGGGCTAGGAAGAGGGGTAGCGTCGCGACGCTACCACGAAATCACAGATTCTGGGATTGCGAATCTCACAGCGACGAGACGCTGTGACCTTTTGCCGCCTATTCCAGATAAGGCAAGGCAGCGTCGAGACGCTCAAGAAGCAGCGTCCCGACGCTAG

Protein sequence

MPPPSASRGRLPPPHASGRRRPLSLRLQPVDRAPPSPTPLPLADDPCAAASPISDLHAAAISPPSIRRLQLVASDVSVLGGFESPDSKLSLCFGCLKSWNLKENWLEADQGFVGLGRGVASRRYHEITDSGIANLTATRRCDLLPPIPDKARQRRDAQEAASRR

Homology

The following BLAST results are available for this feature:

BLAST of Spg022397 vs.


Match Name	E-value	Identity	Description

BLAST of Spg022397 vs.


Match Name	E-value	Identity	Description

BLAST of Spg022397 vs.


Match Name	E-value	Identity	Description

BLAST of Spg022397 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022397.1	Spg022397.1	mRNA