Spg022349 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg022349
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmini zinc finger
Locationscaffold2: 4936469 .. 4939376 (-)
RNA-Seq ExpressionSpg022349
SyntenySpg022349
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAGCTGAGTGGTCGGCCGAGGCTGAGGCCGACCATGGCCCATGGGGGGTTGGGTCGAGCTTGGCCCAACCCCTATGCTTTGCCTCTCCTTTGGGATCCACCTCTCGATTGTGTCTTAGGTGTTGCGTTGTCCTACTTAGTCCTTGAATTCCGTAATGGTCAAAATTACCTATAATAATTATTCTAAAGAAAAAGGAACAAATGTGCATATAGTTTTTAAAATTTAAGAATGCCTATTCTAATTCCTTTTACTTCACTTCTTGATCCTTGTTTTTTTTTTTCATGAAAAACCATGATTTCCATCATTTTCTTTTTACTTCTGGATAAAGATATGAGTATTTTCTTTTGGAAAATGATTTTCCCCTCCTTAAAGTGGATTTCATTGAAAAATGGATATAATTTTGAGAATATTCTTAATGAAGAAAAAAACAGAGGTAAAGATTCAGAAGTATGACATAAGAGGGAAAGGAGTTTATTACCAAGTGAGTCCAAAACTTTCCTATTTTGTCTTTTCAATTTTCCAGTTTTAAGGAATTTCATATAAATTATAGCTTTCCATTTATAAAACCCTTATTACGAATTTACTACATGAATAAATTTTAATAATTTTCTAAAGGAGAAAAAAAAAAAAAAAAAAAAAATTGCTAAGTGGCCCGCTTATATATAAATTTTTATATAGCCATGAATGGACAAATCTCGGTCCTAGTTGTATCTTTGTGAAGAATAAATAATAATAGTTGAATTGAATAATGGAAGGAGAAACTTTATATATAAACAAACAAAATGATACACTGAGCATGAAGAGTGGCATGACAAAGATATATAAGCCCTTAGATCAAGTCTCTTCTGCAATGAATTACAGCATTTCCTTAAATTGTTTCTCTGGATTCATACGGACAGCTGACCAAAATTCAACCATTTAAAACCTCAAACACGGTCCTTGATTCTTGGATATTGCTATGTTATGTTACAGAAATCAAATTCATCAATGAACATCGGCAAGGGAAAATGAACACACTCAAATCCCTTCAACAAAAAAATGTGGCAAAAATGTCTCTATGAATTTTTTGTTAAGGAAAAAAAATGTTGTTTAGAATCGACAGCCATGTGTTTTTGTCTCCCTTTACTTGCAATAACGTGTCAAATTATAAGCACAGAAACTCTCACCCTCTCTTCACTGTTTTCCATTTGTCCATTTCCTTTCTTTAATTAATTTTTATGCTCTCAATTCCATAAGCTTTGAAGGCTCTCGCGTTGTACTCATGCTTGATTTCAACAAAGCACTAGTAAAAGCACTTAGAGGAAATAATGTTACTTCATAATTTACATTCAAAAAAATGAAAATTTGATCAAGACCCATCATCATTTGGGCATAGTACAACGTGGGGTTACTCTAATTTACTCAATTGATATCATAAATTTGATTCATTCAGCCATTTGAAAAAGGGGAAAAAATGAAAGAAACCGAAGAGGAAGGGGTTGTGAGTTAAGACGGTGGAGTAAAGCATATCTACTTGATGTTGAAATTTGTTAGTTTTATTTTAGTTGAGTTGTTGATTTGATGCAAAAGGGGAATTAGGAAGAGGGGGTTGGCACTGTATTTTCAATTTAATAATTGGAATCTTAGGTAGTCGGAGTTGATAATATATGGACCAATGCAGCCTGCCTTTTGAGTGTCATTTGGACCCCTTTTGTTACTTAAAAATAGCATCCCCAGCTCATCTTTGGGCTACACATCTATTCTATATTCTTAATTATTACTGCTTAATTATAATGTTAGGCCTAAAAAGCAGCTCATTTTAATCTCTTTTATTGAAATTAAAGTTAACATAATGATGCCTCTTTTATGTTCATTCGTTCCTTCCTTTGACTCATAACCAGTGCATCATGCATTATTTGAATGAATAAATTAAAAACCCTCTACACCAACAAAAAAAAAAAAGAGAAAAAGAGGGAAATTAATTAAAATTCTTTATAAAGCAAAGCAATTGTGTCAAGAACCAGAAACCATTTTTAGCTAGGGTTCTACTCCTAATTAATTAATTCCCCTCTTTAGCAGCTCCCTTTTTAGGTTCACCAATCAAAGAATGACACGTTGGATATATATTTAATTTCCCCACAAAAGAAAAAAAAAAAAAGTATGTAGTTTGAATAATGAATATAATGTGTGTGTAAGCAAATTGTGAATAACCCACTTCTCCTACCTTTTTGATTAGTAGTGAAGAAGGTTGTGGAAAGTTGTGTAGGAGTGTGACTGGCTTTTGACAAGATTAAATTTGGTAGAGGGTCAATCTTTGCCTTCCAATCCAACCAAAAGGATTTGGAAAATGTTGCCAAAATAAGCTTGTGTTTCTGTTCTATCTTCCATTAATTGCCTTGTGTGTGCCCACTATATCTAACCCATATAAATAACTCTCTTAGGGTTAGGGTTATATTAGCCACTTCCTTCAACCACATTTCAACTAGAGACTACTAGATTTAATTTAACCCTTCAAAACTTCAAAAAGCCTTCTCCTTTTTCCCTTTTAACTTTCCCCTTACACGTTTGGAATTTGATCCATCCATCCATCCCTCATTCAGCCAAGATTGGTGGGTTTAGTGCTCCGTCTGATTCCAAAACCATGAAGAAAAGGCTGGTCATGGTCAAGAAATCTGATGGCTCTGGCGGCCGAAACCGCTCCGGTTCAGGCTCGGTCGTCCGCTACGCCGAGTGCCAGAAGAATCACGCTGCGAAGCTCGGTGGCTTCGCGGTCGACGGTTGCCGGGAGTTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTCAGCTGTGCTGCTTGTGGCTGCCACAGAAATTTTCACAGAAGGGAGGTTGATTCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCAACCATTGA

mRNA sequence

ATGAGTGAGCTGAGTGGTCGGCCGAGGCTGAGGCCGACCATGGCCCATGGGGGGTTGGGTCGAGCTTGGCCCAACCCCTATGCTTTGCCTCTCCTTTGGGATCCACCTCTCGATTGTGTCTTAGGTGTTGCGTTGTCCTACTTAGTCCTTGAATTCCCCAAGATTGGTGGGTTTAGTGCTCCGTCTGATTCCAAAACCATGAAGAAAAGGCTGGTCATGGTCAAGAAATCTGATGGCTCTGGCGGCCGAAACCGCTCCGGTTCAGGCTCGGTCGTCCGCTACGCCGAGTGCCAGAAGAATCACGCTGCGAAGCTCGGTGGCTTCGCGGTCGACGGTTGCCGGGAGTTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTCAGCTGTGCTGCTTGTGGCTGCCACAGAAATTTTCACAGAAGGGAGGTTGATTCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCAACCATTGA

Coding sequence (CDS)

ATGAGTGAGCTGAGTGGTCGGCCGAGGCTGAGGCCGACCATGGCCCATGGGGGGTTGGGTCGAGCTTGGCCCAACCCCTATGCTTTGCCTCTCCTTTGGGATCCACCTCTCGATTGTGTCTTAGGTGTTGCGTTGTCCTACTTAGTCCTTGAATTCCCCAAGATTGGTGGGTTTAGTGCTCCGTCTGATTCCAAAACCATGAAGAAAAGGCTGGTCATGGTCAAGAAATCTGATGGCTCTGGCGGCCGAAACCGCTCCGGTTCAGGCTCGGTCGTCCGCTACGCCGAGTGCCAGAAGAATCACGCTGCGAAGCTCGGTGGCTTCGCGGTCGACGGTTGCCGGGAGTTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTCAGCTGTGCTGCTTGTGGCTGCCACAGAAATTTTCACAGAAGGGAGGTTGATTCTGAAGTTGTTTTTGAGTATTCTCCTCCAAACTCCAACCATTGA

Protein sequence

MSELSGRPRLRPTMAHGGLGRAWPNPYALPLLWDPPLDCVLGVALSYLVLEFPKIGGFSAPSDSKTMKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
Homology
[Close]
BLAST of Spg022349 vs. NCBI nr
Match: XP_022135253.1 (mini zinc finger protein 3-like [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 5.5e-43
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEE 126
           MKKRLV+VKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEE
Sbjct: 1   MKKRLVVVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEE 60

Query: 127 ALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           AL CAAC CHRNFHRREVDSEVVFEYSPPNS++
Sbjct: 61  ALICAACSCHRNFHRREVDSEVVFEYSPPNSSY 93

[Close]
BLAST of Spg022349 vs. NCBI nr
Match: XP_022921765.1 (mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-42
Identity = 88/94 (93.62%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTE 126
           MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTE
Sbjct: 1   MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTE 60

Query: 127 EALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           EALSCAACGCHRNFHRREVD+EVVFEYSPPNS+H
Sbjct: 61  EALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH 94

[Close]
BLAST of Spg022349 vs. NCBI nr
Match: XP_022987207.1 (mini zinc finger protein 3-like [Cucurbita maxima])

HSP 1 Score: 182.2 bits (461), Expect = 3.5e-42
Identity = 87/94 (92.55%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTE 126
           MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTE
Sbjct: 1   MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTE 60

Query: 127 EALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           EALSCAACGCHRNFHRR+VD+EVVFEYSPPNS+H
Sbjct: 61  EALSCAACGCHRNFHRRDVDAEVVFEYSPPNSDH 94

[Close]
BLAST of Spg022349 vs. NCBI nr
Match: KAG7023191.1 (Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.4 bits (459), Expect = 6.0e-42
Identity = 87/94 (92.55%), Postives = 92/94 (97.87%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTE 126
           MKKR+V+VKKSDG GGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTE
Sbjct: 1   MKKRVVVVKKSDGPGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTE 60

Query: 127 EALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           EALSCAACGCHRNFHRREVD+EVVFEYSPPNS+H
Sbjct: 61  EALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH 94

[Close]
BLAST of Spg022349 vs. NCBI nr
Match: XP_023516615.1 (mini zinc finger protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-41
Identity = 87/94 (92.55%), Postives = 92/94 (97.87%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTE 126
           MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTE
Sbjct: 1   MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTE 60

Query: 127 EALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           EALSCAACGCHRNFHRREVD+EVVFEYSP NS+H
Sbjct: 61  EALSCAACGCHRNFHRREVDAEVVFEYSPTNSDH 94

[Close]
BLAST of Spg022349 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.7e-28
Identity = 62/93 (66.67%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEE 126
           MKKR V++K+   S     + S S VRY ECQKNHAA +GG+AVDGCREFMA G D   +
Sbjct: 1   MKKRQVVIKQRKSS--YTMTSSSSNVRYVECQKNHAANIGGYAVDGCREFMASGGD---D 60

Query: 127 ALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           AL+CAACGCHRNFHRREVD+EVV EYSPPN+N+
Sbjct: 61  ALTCAACGCHRNFHRREVDTEVVCEYSPPNANN 88

[Close]
BLAST of Spg022349 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.7e-27
Identity = 59/101 (58.42%), Postives = 73/101 (72.28%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNRSGSG----------SVVRYAECQKNHAAKLGGFAVDGCREF 126
           MKKR +++K+   +   + S +           S VRY ECQKNHAA +GG+AVDGCREF
Sbjct: 2   MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61

Query: 127 MARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNS 158
           MA G +GT +AL CAACGCHRNFHR+EVD+EVV EYSPPN+
Sbjct: 62  MAAGVEGTVDALRCAACGCHRNFHRKEVDTEVVCEYSPPNA 102

[Close]
BLAST of Spg022349 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.5e-23
Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNRSGSGS-----VVRYAECQKNHAAKLGGFAVDGCREFMA-RG 126
           M+KR V+++++        S + S      VRY ECQKNHAA +GG+AVDGCREFMA RG
Sbjct: 1   MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 127 EDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNS 158
           E+GT  AL+CAACGCHR+FHRRE+++EVV + + P S
Sbjct: 61  EEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPS 97

[Close]
BLAST of Spg022349 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20
Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 0 

Query: 77  SDGSGGRNRS-GSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGC 136
           S G GG  RS G G+ +RY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACGC
Sbjct: 31  SSGGGGVGRSKGVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGC 90

Query: 137 HRNFHRREVDS 147
           HRNFHR+E +S
Sbjct: 91  HRNFHRKETES 101

[Close]
BLAST of Spg022349 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-19
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 85  RSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREV 144
           R  +  VVRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV
Sbjct: 26  RKENNKVVRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREV 85

Query: 145 DS 147
           ++
Sbjct: 86  EA 87

[Close]
BLAST of Spg022349 vs. ExPASy TrEMBL
Match: A0A6J1C4B2 (mini zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007261 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.6e-43
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEE 126
           MKKRLV+VKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEE
Sbjct: 1   MKKRLVVVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEE 60

Query: 127 ALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           AL CAAC CHRNFHRREVDSEVVFEYSPPNS++
Sbjct: 61  ALICAACSCHRNFHRREVDSEVVFEYSPPNSSY 93

[Close]
BLAST of Spg022349 vs. ExPASy TrEMBL
Match: A0A6J1E6Q9 (mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 7.7e-43
Identity = 88/94 (93.62%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTE 126
           MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTE
Sbjct: 1   MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTE 60

Query: 127 EALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           EALSCAACGCHRNFHRREVD+EVVFEYSPPNS+H
Sbjct: 61  EALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH 94

[Close]
BLAST of Spg022349 vs. ExPASy TrEMBL
Match: A0A6J1J9R5 (mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42
Identity = 87/94 (92.55%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTE 126
           MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTE
Sbjct: 1   MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTE 60

Query: 127 EALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           EALSCAACGCHRNFHRR+VD+EVVFEYSPPNS+H
Sbjct: 61  EALSCAACGCHRNFHRRDVDAEVVFEYSPPNSDH 94

[Close]
BLAST of Spg022349 vs. ExPASy TrEMBL
Match: A0A0A0LSA6 (ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009710 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39
Identity = 83/95 (87.37%), Postives = 87/95 (91.58%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNR---SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 126
           MKKRLV+V+KSDGS GR     S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGEDG
Sbjct: 1   MKKRLVVVRKSDGSNGRRNHHWSSSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGEDG 60

Query: 127 TEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSN 159
           TEEAL+CAACGCHRNFHRREVD+EVVFEYSPPNSN
Sbjct: 61  TEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 95

[Close]
BLAST of Spg022349 vs. ExPASy TrEMBL
Match: A0A5A7UWS7 (Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002440 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.2e-39
Identity = 83/96 (86.46%), Postives = 87/96 (90.62%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNR----SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGED 126
           MKKRLV+VKKSDGS GR      + SGS VRYAECQKNHAAKLGGFAVDGCREFMARGED
Sbjct: 1   MKKRLVVVKKSDGSNGRRNHHWSASSGSEVRYAECQKNHAAKLGGFAVDGCREFMARGED 60

Query: 127 GTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSN 159
           GTEEAL+CAACGCHRNFHRREVD+EVVFEYSPPNSN
Sbjct: 61  GTEEALNCAACGCHRNFHRREVDAEVVFEYSPPNSN 96

[Close]
BLAST of Spg022349 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger )

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-29
Identity = 62/93 (66.67%), Postives = 73/93 (78.49%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEE 126
           MKKR V++K+   S     + S S VRY ECQKNHAA +GG+AVDGCREFMA G D   +
Sbjct: 1   MKKRQVVIKQRKSS--YTMTSSSSNVRYVECQKNHAANIGGYAVDGCREFMASGGD---D 60

Query: 127 ALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH 160
           AL+CAACGCHRNFHRREVD+EVV EYSPPN+N+
Sbjct: 61  ALTCAACGCHRNFHRREVDTEVVCEYSPPNANN 88

[Close]
BLAST of Spg022349 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 )

HSP 1 Score: 121.3 bits (303), Expect = 6.9e-28
Identity = 59/101 (58.42%), Postives = 73/101 (72.28%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNRSGSG----------SVVRYAECQKNHAAKLGGFAVDGCREF 126
           MKKR +++K+   +   + S +           S VRY ECQKNHAA +GG+AVDGCREF
Sbjct: 2   MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61

Query: 127 MARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNS 158
           MA G +GT +AL CAACGCHRNFHR+EVD+EVV EYSPPN+
Sbjct: 62  MAAGVEGTVDALRCAACGCHRNFHRKEVDTEVVCEYSPPNA 102

[Close]
BLAST of Spg022349 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 )

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-24
Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 0 

Query: 67  MKKRLVMVKKSDGSGGRNRSGSGS-----VVRYAECQKNHAAKLGGFAVDGCREFMA-RG 126
           M+KR V+++++        S + S      VRY ECQKNHAA +GG+AVDGCREFMA RG
Sbjct: 1   MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 127 EDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNS 158
           E+GT  AL+CAACGCHR+FHRRE+++EVV + + P S
Sbjct: 61  EEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPS 97

[Close]
BLAST of Spg022349 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 47/71 (66.20%), Postives = 53/71 (74.65%), Query Frame = 0 

Query: 77  SDGSGGRNRS-GSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGC 136
           S G GG  RS G G+ +RY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACGC
Sbjct: 31  SSGGGGVGRSKGVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGC 90

Query: 137 HRNFHRREVDS 147
           HRNFHR+E +S
Sbjct: 91  HRNFHRKETES 101

[Close]
BLAST of Spg022349 vs. TAIR 10
Match: AT1G14440.1 (homeobox protein 31 )

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-19
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 0 

Query: 91  VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVF 150
           +++Y EC KNHAA +GG A DGC EFM  GEDG+ EAL+C+AC CHRNFHR+EV+ E+  
Sbjct: 87  MIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAA 146

Query: 151 EYSPPNSNH 160
               P   H
Sbjct: 147 TAMSPYHQH 155

The following BLAST results are available for this feature:
BLAST of Spg022349 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022135253.15.5e-4394.62mini zinc finger protein 3-like [Momordica charantia][more]
XP_022921765.11.6e-4293.62mini zinc finger protein 3-like [Cucurbita moschata] >KAG6589505.1 Mini zinc fin... [more]
XP_022987207.13.5e-4292.55mini zinc finger protein 3-like [Cucurbita maxima][more]
KAG7023191.16.0e-4292.55Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023516615.11.3e-4192.55mini zinc finger protein 3-like [Cucurbita pepo subsp. pepo][more]
BLAST of Spg022349 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2Q4936.7e-2866.67Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1[more]
Q9CA519.7e-2758.42Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1[more]
Q9LJW56.5e-2355.67Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1[more]
Q9SB612.3e-2066.20Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S... [more]
B8BIU81.2e-1969.35Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 S... [more]
BLAST of Spg022349 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C4B22.6e-4394.62mini zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007261 P... [more]
A0A6J1E6Q97.7e-4393.62mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE... [more]
A0A6J1J9R51.7e-4292.55mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4... [more]
A0A0A0LSA64.0e-3987.37ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=... [more]
A0A5A7UWS75.2e-3986.46Mini zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
BLAST of Spg022349 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G18835.14.8e-2966.67mini zinc finger [more]
AT1G74660.16.9e-2858.42mini zinc finger 1 [more]
AT3G28917.14.6e-2455.67mini zinc finger 2 [more]
AT4G24660.11.7e-2166.20homeobox protein 22 [more]
AT1G14440.14.5e-1956.52homeobox protein 31 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 92..144
e-value: 4.1E-29
score: 100.7
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMTIGR01566TIGR01566coord: 93..144
e-value: 4.7E-26
score: 89.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROSITEPS51523ZF_HD_DIMERcoord: 94..143
score: 25.37985
NoneNo IPR availablePANTHERPTHR31948ZINC-FINGER HOMEODOMAIN PROTEIN 2coord: 69..156
NoneNo IPR availablePANTHERPTHR31948:SF107MINI ZINC FINGER PROTEIN 3coord: 69..156

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg022349.1Spg022349.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000976 transcription cis-regulatory region binding