Spg022347 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCCCCTAGTTTTCCATAGCTCTTCCCTCGCGCCTGAAGAGAGAACAGAGCTAGGACCCTTCACCTTGATATGTTCATTAGAAAGGTTCACCTTGAGTTATCATCATTTCTTTCTTGAATTTGATGATAATGACGATGAGATTCCGAATCGAAGAACAAAGCACTTAGGACCAAAATCCCTCCTTTCTCGAATGGAGAATTCAATAAATTCAACAACTTTTTTGTTGTGGGGACTCTACCTAGGCTTTGGTTTGATTTTCAACAAGCCCGGTTAAGCTCACTTGAACACACTACAATTTTATATTTATTTCTTTAATTAATACTCTGTAGTTTTATTTTGTGGGTTTGTTGGAGTCTTTGGTTGTTTCTATTTTTATGCCTTTTTCCTCCTATTATTTAGCCAGGTACGGAAGTGGTTGCCAACAAGAACATAGTTCATCTGACATCAAGATGTACTGATAACCACGAGGTTTGTGGTTCGAATCCCCCACCCCCATATTGTCAAAAAAAAAAAAAAGTACGGAAGTGGTTACTTGATTTTCTCCTCCCTCAACAACCTTTGTATTATGTATTTATTTTCTTCCTCTCTCCTCTCTCTATATCTACAAACCTGTGATTTCCTTTGTTGGTATCAGAGCCAGTTAAAGCCAATGCTGGAGAAGAGACTAAAATGGCCAAAGACGAGATTTCTTCGTCAACGCCAATAGGCACTATTGCTGCAATCATCCCAACGAATCATGGTACTTGTTGTACTTCGAGGACAGAAGGTTGATGGCTATGCTCTTGGAACAAAAGAACAACCACCTGAATTCATCACCACTAGTGAGAAAGAAACTTCTGCACGCACAATAACTAATCCGACCTATGAGGAACGGAGAGTTGTTGATCAAGCTCTATTAGGATGGTGCTTCGGATCGATGACACCCTCTGTGGCATGTGATGTTATTGACTTAAAGACTTCTAGAGAATTGTGGAAGGCACTCGAGGAACTCTATGGTGCAACAACCAAAGCTCGCATTATCCAACTTAGGAAGGTTATGCAAACCACAAGGGGGAGCTCCATGAAAATGGAAAACTATCTTAGCTTCATGAAGCAAACTTCAGAACATCTAAAATTGGCTGGTGAATCCCACCCTCTATGCTCACCAATTATTATAGAGAATTTTTGGTGGATGTGTCATTTTGAATCCATATTTTCATAAATGTCCAAAATTTTCAAGATTTTCAAGATTAGATTTTCAACACTTTTTTCTTACCATTATACCCTTATTATCATTTTATTTATTGATTTTTAAATTTTTTTTATAGAAAATAGACAGATTTTATTTATTTCCATATTTAGTTTTGATTCTCCCCATTTTTTATTTCATTGATTATGTGTCTTTAATTTCCCATTTTTTCGTTTTCACGGCTACATTGAAGTATTTCTGCTCCTTTCGTTTTCACGGCTACAACCTGCGGCATCCTCGCGTTAATTCTTTTCTCGATGGCGACCTTTTTATCAGCAAGCGGTGGGGGTTTTTTCCGACGGCGACCTTTTTATCAGCAAGCGGCACTCCAATTCGTTTTCATGGCTACATCCTCGCGTTAACTCTCTTCTCGATGGTGACCTTTTTATCAGCAAGCGGTGGTGGGTTTTTTTTCGGTGGCGACCTTTTTATCAGCAAGCGGTGGTGGGTTTTTTTCCGGTGGGTTTAGCTTCGGTTTGTTATCTTCTTTTTATTCCCAGCATTGTATCATTCCTCATTTGCTTCTAGTTTTACAGATTATTCCACATACTTCGCACGCTTTTTCCAGTATCGTCTTCATCCCATTCACGAGTTTTCCGGCGTTTAGTTCAGAAAATCGATTACTGCAGTATCGACATAGGTATGTTTCATATAATAGATGTATATAACATTCCAAAAAGAAACTGATGTATGTGATACATATACCTCATATATTCATCTGTTCATTTATATTCATGCTGTATATTCTGTTCAAACATGTTTATAGTCTGGACGAGTGTATGAAACATATCATATATGACATGTATATATCATGTTCTGTACATTTCATGTAATTGTATATTATATCTCAATATAATTGTGAGGAATATGTCAATATAATTGTGAGGAATATGTCAATATACTCATGTTTATATATCATACGTCATGATTATATTGTTATCGAAATTTCAGAACATATAATATATCATATAATTATATGGATATATTATATAATTGATTTCATGGCTTATATATTACCATCATCTTTAATGGTTTATATATTATAATTCTCGGTATTTTGAAATATACATCTTTATGTTTCATACTTATCTGATACATATTCTATGGTTTATTCCTTATATATATTATGAAGGGAGTGTTATTGTTCAAGTGTTGCACAATGGTCGGTGGAATGAGAGTGATAATTACGTCGACTATAAAGTATCACAAGTATTATTGAATGATGGGATGAATTTTATTGAGTTTCAAGATTGTATCATACAGAATCTGGGCAGTTTAGGTAATTTGGACTCCCCTGAGTTATTTGTTAGCATAGACTCTAAAAATTTCATAAAGAATTATGCAAAGATCACAGAAGATAAGGACATAAGATGGTTGTTTAGAATAGCCTCAAACAATGTTGAGTAGTACTGTGTTGTAATCGTTGATTCTAAAAACAACCTATCTATTATTCTGGATAATATCCCCCTCACAGTTTCAAACTCTAATGAACCGGTAGGTGAAGGGCGTTTTTTCCACACCATTGATGTTTCGAAGATGTCTTCCAATTTTGAGATTTGCGTAGATGACATGTTCTCCTCGAAGCTTGTGTTACAGAATGCTATTCGAGCTATTGCCATTAGAGACAACTTCCAATTCAAAACAGTCAAATCTAACCGTGACATTTTTGTTGTGCAATGTGTGGTTGAGGATTGTGAGTGGATCCTTAGAGCATGTAGGTTCGGTGACGATGTTAGTCCCACTGGGTTGTCAAGAGATTTGACAGTGAACATACATGTTCGATTGATGTTGTATTGACAGATCACAAGCAAGCGACATTTACATTTATTAAGGATTGCATTAAGCGGAAGATTAGCATTGCGACTAGTGAATTACCCACTCCTAAAGACATTATATCATTCATCCGATCGGAATATGACTTGCGTATTAGTTACCAAAAGGCTTGGCGTGCTCGGGAAAGCTGCATTAAATGA ATGTTGCCCCTAGTTTTCCATAGCTCTTCCCTCGCGCCTGAAGAGAGAACAGAGCTAGGACCCTTCACCTTGATATGTACGGAAGTGGTTGCCAACAAGAACATAGTTCATCTGACATCAAGATGTACTGATAACCACGAGTTTTACAGATTATTCCACATACTTCGCACGCTTTTTCCAGTATCGTCTTCATCCCATTCACGAGTTTTCCGGCGTTTAGTTCAGAAAATCGATTACTGCAGTATCGACATAGGTGAAGGGCGTTTTTTCCACACCATTGATGTTTCGAAGATGTCTTCCAATTTTGAGATTTGCGTAGATGACATGTTCTCCTCGAAGCTTGTGTTACAGAATGCTATTCGAGCTATTGCCATTAGAGACAACTTCCAATTCAAAACAGTCAAATCTAACCGTGACATTTTTGTTGTGCAATGTGTGGTTGAGGATTGTGAGTGGATCCTTAGAGCATATCACAAGCAAGCGACATTTACATTTATTAAGGATTGCATTAAGCGGAAGATTAGCATTGCGACTAGTGAATTACCCACTCCTAAAGACATTATATCATTCATCCGATCGGAATATGACTTGCGTATTAGTTACCAAAAGGCTTGGCGTGCTCGGGAAAGCTGCATTAAATGA ATGTTGCCCCTAGTTTTCCATAGCTCTTCCCTCGCGCCTGAAGAGAGAACAGAGCTAGGACCCTTCACCTTGATATGTACGGAAGTGGTTGCCAACAAGAACATAGTTCATCTGACATCAAGATGTACTGATAACCACGAGTTTTACAGATTATTCCACATACTTCGCACGCTTTTTCCAGTATCGTCTTCATCCCATTCACGAGTTTTCCGGCGTTTAGTTCAGAAAATCGATTACTGCAGTATCGACATAGGTGAAGGGCGTTTTTTCCACACCATTGATGTTTCGAAGATGTCTTCCAATTTTGAGATTTGCGTAGATGACATGTTCTCCTCGAAGCTTGTGTTACAGAATGCTATTCGAGCTATTGCCATTAGAGACAACTTCCAATTCAAAACAGTCAAATCTAACCGTGACATTTTTGTTGTGCAATGTGTGGTTGAGGATTGTGAGTGGATCCTTAGAGCATATCACAAGCAAGCGACATTTACATTTATTAAGGATTGCATTAAGCGGAAGATTAGCATTGCGACTAGTGAATTACCCACTCCTAAAGACATTATATCATTCATCCGATCGGAATATGACTTGCGTATTAGTTACCAAAAGGCTTGGCGTGCTCGGGAAAGCTGCATTAAATGA MLPLVFHSSSLAPEERTELGPFTLICTEVVANKNIVHLTSRCTDNHEFYRLFHILRTLFPVSSSSHSRVFRRLVQKIDYCSIDIGEGRFFHTIDVSKMSSNFEICVDDMFSSKLVLQNAIRAIAIRDNFQFKTVKSNRDIFVVQCVVEDCEWILRAYHKQATFTFIKDCIKRKISIATSELPTPKDIISFIRSEYDLRISYQKAWRARESCIK Homology
BLAST of Spg022347 vs. NCBI nr
Match: XP_008452162.1 (PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo]) HSP 1 Score: 137.1 bits (344), Expect = 1.8e-28 Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 0
BLAST of Spg022347 vs. NCBI nr
Match: KAA0060121.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-25 Identity = 66/147 (44.90%), Postives = 91/147 (61.90%), Query Frame = 0
BLAST of Spg022347 vs. NCBI nr
Match: KAA0039149.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 125.6 bits (314), Expect = 5.3e-25 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of Spg022347 vs. NCBI nr
Match: XP_008463110.1 (PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 5.3e-25 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of Spg022347 vs. NCBI nr
Match: KAA0033232.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 124.8 bits (312), Expect = 9.0e-25 Identity = 64/147 (43.54%), Postives = 91/147 (61.90%), Query Frame = 0
BLAST of Spg022347 vs. ExPASy TrEMBL
Match: A0A1S3BT85 (uncharacterized protein LOC103493267 OS=Cucumis melo OX=3656 GN=LOC103493267 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 8.5e-29 Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 0
BLAST of Spg022347 vs. ExPASy TrEMBL
Match: A0A5A7V2Y2 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00410 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 6.7e-26 Identity = 66/147 (44.90%), Postives = 91/147 (61.90%), Query Frame = 0
BLAST of Spg022347 vs. ExPASy TrEMBL
Match: A0A5A7TCZ3 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00480 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 2.6e-25 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of Spg022347 vs. ExPASy TrEMBL
Match: A0A1S3CIV7 (uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 2.6e-25 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of Spg022347 vs. ExPASy TrEMBL
Match: A0A5D3BGB6 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold703G00120 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.4e-25 Identity = 64/147 (43.54%), Postives = 91/147 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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