Spg022084 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGATCTTCGAAAAGAGAGGGAAAGTAGAAGACGAGTATATAAGATCAGGCGATGGACGGTCAGGATTTGTTGAGAGGATTCAATTGTTTCAGTCCATTAGACCGTTTGAGTGCGATTTTAAAATTTGAACTGTCCAATGTACTTTTCTTTTTCTTTTCTTTTCTTTTTTCTGAAGTAAACAAAATAAATAAATAAATAAAAGAGAAAAAATAAAAGAAATTGAAATTATGTCAGACAAAATTAGAATATGGATTTAGAAATTGTGAGTATCGACGTGAAATTCTAGATTTAAAATCTTTGGCTATTGTTCTCGAAAAACCACCTATTTAACTTGTTAATAGAATAAGGTTTTCATTTTTTTTTTTTTTTTTAGTAAATCAACATTTGGGGATGGTAGGATTCGAACCTTTTACCTTTTGGTCAAAGGTATATGTCAATTACCGCTGAACTATGCTCGTTTTGATAGAAAAAAAAATTATCATTGGATCTTGATCCAATTAACTTTTTATATATATATATATATATATATATATATATATATATATAATTAATTTACTAGTCATCGAGTAATACTGGGTGATACTTAATTAATTTACTAGTTGTAATAAGCTTATTTGACGCGTAATTTTGATTCTTACAGTTTTGTGGTTTGTAAGAGTTAATATGGAGTATAAAAGATGTGTTTTCTAAGTTGAAATTTATGAGATGTGTTTTCAAACTTACTATTTATAAAATGAGACACTAATGTTTGATTGCTCGATCGACTATATAATTTTAATATTCGTAGAGCGTGAATTAACAAATTTATAGTTTATAAATAATATATAAATTCTCATATCAAACATATTCTCTAACTTCTCAATCTCAAGAATCCTTCCACATCTATCGCGAGTTAAATTTGTCAACATAAAGAAACAAAGTGATCAAGGCATCTAGAACCATGGAATTTGAGGTCCAATCAAGATGAGTAGTGTCAATTTCATCATGTGAATGGCTCTTGCACTAAACAAAAGTATTATTCTTTTTATTTGATCATGAATCAAACTATCAAATCCAAATCAAATTCAACTTCGAAACTCTTGGTGATTATCTTTGGCTTCTGTTTTTTTTCTTTTGACAACATAAGATGGAGATGGAAGATTCGAACTACATACATATTAGTCATAAATACAAGTTTTATGTCAGTTCAGCTATGCTCATGTTGGCATCATTGACTTATGTTTGCCTTCTACACTGATTAAAAGTTTTATGGCTTAATTTGATTATTGGTATTAAAATTATATATATATATATATATATATATATATATATATACTATCTCAAGTTATTGAAAAGTATGTAGATCAAATTTCAAGTATAGATATCAAAATAGATAATGAATTAAAGTAATACTAGCAAATCCTAATACATTTTTAGCTGGTTGATACATTATGCATTTATGTAAAGATTAGATATTAATTTTCTACCCTTACATTTCTTGAACTAAAAAAACAAAGCAATACCTAAAGTTGAAAAAGTTTTTTTTTTTTTTTTTGACAACATGTGGGGTAGGGAGATTTGAATCATAGACCTCTTGATCATTAGTACAGACAGTCAAAATTGTACTTACCCACTAAAAAGATAACTATTTTACCATAGGAGTTATAATAGTATTTTAACTAAATATAATACTATTATAATTATAATAAGTTAAAATTAAAATATATTTAAAAGAATATATATTTGACCCAAAGTTTAAGGGGCAGTTGCATAGATGGCAAATTGGACCAAATTAATAGCAAATATAGCACAGTTGCAAACTAATTGCAAATATAGCAAAATTAATTGCACAAAACCAAAAAAATTGTTGTCAGATTCTATCCGTGTCTATCACTGATAGACTATGATTATTCAAAATATATTAGTGTCTATCGCTAATAGACTTCGATTAATCAAAATCTATCCGTAACTATCGAAGTCTATCAATGATAGTCACTGATAGATTTTGATTAATCAGAGTTTATCAACGATAGACACATTCTGAATAATAGGAGTCTATCAGTAGACTGATAGATTATGATTAATCAGAGTCTATCACTGATAAACTCTGATAATCGAAGTCTATCATATAGATTCTAATTAACTATAATCTATTAGTAATATACTCTGATAGATTTTGCTATATTTGCAATTTTTTTTACATTGTGCTTTATTTGCTATTTATTTAGTCCAATTTGCCATCCACTGCAAATTCTCGGTTTCAATCCCGACCCAAATATGAAAAGAAAAAAAATACCCTAAAATGAATCATGCGTTGTTATTATTATTATTATTTAATTCTTTTTGAAAGATAATCATGCGTTATTTTTTTTGTAAAAAAATAATAAATAAGAAATCATGCGTTACTTGTTTAGCGATTAGAGTAAAAAATGGAGATAATTATTGATAAATAGGGCAGTTTCTTTTCTTAGTAAAACGCAATCCTTTCTTTCTCTTTCTTCTTCGTTCCTGTTTCTTCATCAGATAACAATGGCCGTAATGAACATTAATTGAAACTCTACGCGTTTTTCAAACGCTTCGATCCATCCATTTTCTCTTCAACAGTCCATCCATTTTCCCGTCTTCTTCGCTCTTTCCATGGCGATTACACGACTTCCTTTTCTCAACTGAACGCTCTTCTTTATCTCCTCTTCTTCGCTCCAGCTTTCATTCCCACGCATTCCAACCACCGCCGCACGGTGGATTCACTCTCTATTCTCCTCCGAAATGCGTCTCCAAATCGATTGAAGTCAGTCGGAAGCGGTGCGGTTCTCCATCTCTGCCATGGGACGCCCTTTCGCTTGCCTCTGAGCGAATCCGATCGGAATACATTTGTTTCGTCTTTCCTCGATTCGGAACCCTACGGATCGGACTTGCTCCGTCGCTCCACGTTTCCGATTCGTTTTTTCTTTTTTTTTTTTGTTCTTTCGATCGTATACATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATCGTCCGTCACAAATCGTCGCCGAAAGAAGAGAAAATCGACGCGCCGAGAGAGAGGCGGCAGTTCGCGGAGGTTGCCGGCGGTTCGGCGGCGGAATGCACGGCGATTTGCTGTTGCTGTCCATGGACGCTGTTGAACCTCGTGATATTTGCCATCTACCGGATGCCGGCGGGGCTCTGCCGGAAGGCGATAAACAGGAGAAAACGACACCGTAAAATGAAGAACAAGAAGTATCTCATCCAGCAACGGAAGAACGTCTCTCAGGATTTCACAGATGGATCGGTGGGGCCCGCAATGGAAGGTTTTGAGGCCCACGAAATGACGGATGACGTGGCAAATGGCGAAGATTTGATGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGGAGTTCTTCTCAAAGACACGAGTAA ATGAGGGATCTTCGAAAAGAGAGGGAAAGTAGAAGACGAGTATATAAGATCAGGCGATGGACGGTCAGGATTTTCCATCCATTTTCCCGTCTTCTTCGCTCTTTCCATGGCGATTACACGACTTCCTTTTCTCAACTGAACGCTCTTCTTTATCTCCTCTTCTTCGCTCCAGCTTTCATTCCCACGCATTCCAACCACCGCCGCACGGTGGATTCACTCTCTATTCTCCTCCGAAATGCGTCTCCAAATCGATTGAAGTCAGTCGGAAGCGGTGCGGTTCTCCATCTCTGCCATGGGACGCCCTTTCGCTTGCCTCTGAGCGAATCCGATCGGAATACATTTGTTTCGTCTTTCCTCGATTCGGAACCCTACGGATCGGACTTGCTCCGTCGCTCCACGTTTCCGATTCGTTTTTTCTTTTTTTTTTTTGTTCTTTCGATCGTATACATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATCGTCCGTCACAAATCGTCGCCGAAAGAAGAGAAAATCGACGCGCCGAGAGAGAGGCGGCAGTTCGCGGAGGTTGCCGGCGGTTCGGCGGCGGAATGCACGGCGATTTGCTGTTGCTGTCCATGGACGCTGTTGAACCTCGTGATATTTGCCATCTACCGGATGCCGGCGGGGCTCTGCCGGAAGGCGATAAACAGGAGAAAACGACACCGTAAAATGAAGAACAAGAAGTATCTCATCCAGCAACGGAAGAACGTCTCTCAGGATTTCACAGATGGATCGGTGGGGCCCGCAATGGAAGGTTTTGAGGCCCACGAAATGACGGATGACGTGGCAAATGGCGAAGATTTGATGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGGAGTTCTTCTCAAAGACACGAGTAA ATGAGGGATCTTCGAAAAGAGAGGGAAAGTAGAAGACGAGTATATAAGATCAGGCGATGGACGGTCAGGATTTTCCATCCATTTTCCCGTCTTCTTCGCTCTTTCCATGGCGATTACACGACTTCCTTTTCTCAACTGAACGCTCTTCTTTATCTCCTCTTCTTCGCTCCAGCTTTCATTCCCACGCATTCCAACCACCGCCGCACGGTGGATTCACTCTCTATTCTCCTCCGAAATGCGTCTCCAAATCGATTGAAGTCAGTCGGAAGCGGTGCGGTTCTCCATCTCTGCCATGGGACGCCCTTTCGCTTGCCTCTGAGCGAATCCGATCGGAATACATTTGTTTCGTCTTTCCTCGATTCGGAACCCTACGGATCGGACTTGCTCCGTCGCTCCACGTTTCCGATTCGTTTTTTCTTTTTTTTTTTTGTTCTTTCGATCGTATACATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATCGTCCGTCACAAATCGTCGCCGAAAGAAGAGAAAATCGACGCGCCGAGAGAGAGGCGGCAGTTCGCGGAGGTTGCCGGCGGTTCGGCGGCGGAATGCACGGCGATTTGCTGTTGCTGTCCATGGACGCTGTTGAACCTCGTGATATTTGCCATCTACCGGATGCCGGCGGGGCTCTGCCGGAAGGCGATAAACAGGAGAAAACGACACCGTAAAATGAAGAACAAGAAGTATCTCATCCAGCAACGGAAGAACGTCTCTCAGGATTTCACAGATGGATCGGTGGGGCCCGCAATGGAAGGTTTTGAGGCCCACGAAATGACGGATGACGTGGCAAATGGCGAAGATTTGATGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGGAGTTCTTCTCAAAGACACGAGTAA MRDLRKERESRRRVYKIRRWTVRIFHPFSRLLRSFHGDYTTSFSQLNALLYLLFFAPAFIPTHSNHRRTVDSLSILLRNASPNRLKSVGSGAVLHLCHGTPFRLPLSESDRNTFVSSFLDSEPYGSDLLRRSTFPIRFFFFFFVLSIVYMARKVLLRSPAIVRHKSSPKEEKIDAPRERRQFAEVAGGSAAECTAICCCCPWTLLNLVIFAIYRMPAGLCRKAINRRKRHRKMKNKKYLIQQRKNVSQDFTDGSVGPAMEGFEAHEMTDDVANGEDLMKLEEEMWGRFNQTGFWRSSSQRHE Homology
BLAST of Spg022084 vs. NCBI nr
Match: XP_038879203.1 (uncharacterized protein LOC120071168 [Benincasa hispida]) HSP 1 Score: 238.4 bits (607), Expect = 7.9e-59 Identity = 125/154 (81.17%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of Spg022084 vs. NCBI nr
Match: KGN63891.1 (hypothetical protein Csa_014343 [Cucumis sativus]) HSP 1 Score: 238.0 bits (606), Expect = 1.0e-58 Identity = 120/153 (78.43%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Spg022084 vs. NCBI nr
Match: KAG6587694.1 (hypothetical protein SDJN03_16259, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021660.1 hypothetical protein SDJN02_15386, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 229.2 bits (583), Expect = 4.8e-56 Identity = 114/153 (74.51%), Postives = 131/153 (85.62%), Query Frame = 0
BLAST of Spg022084 vs. NCBI nr
Match: TYK28512.1 (hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa]) HSP 1 Score: 228.4 bits (581), Expect = 8.2e-56 Identity = 116/148 (78.38%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of Spg022084 vs. NCBI nr
Match: XP_022933995.1 (uncharacterized protein LOC111441234 [Cucurbita moschata]) HSP 1 Score: 227.6 bits (579), Expect = 1.4e-55 Identity = 113/153 (73.86%), Postives = 130/153 (84.97%), Query Frame = 0
BLAST of Spg022084 vs. ExPASy TrEMBL
Match: A0A0A0LV48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025240 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 5.0e-59 Identity = 120/153 (78.43%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Spg022084 vs. ExPASy TrEMBL
Match: A0A5D3DY75 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001510 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 4.0e-56 Identity = 116/148 (78.38%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of Spg022084 vs. ExPASy TrEMBL
Match: A0A6J1F6E1 (uncharacterized protein LOC111441234 OS=Cucurbita moschata OX=3662 GN=LOC111441234 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 6.8e-56 Identity = 113/153 (73.86%), Postives = 130/153 (84.97%), Query Frame = 0
BLAST of Spg022084 vs. ExPASy TrEMBL
Match: A0A5A7UQK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004700 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55 Identity = 114/148 (77.03%), Postives = 133/148 (89.86%), Query Frame = 0
BLAST of Spg022084 vs. ExPASy TrEMBL
Match: A0A6J1BZB0 (uncharacterized protein LOC111006972 OS=Momordica charantia OX=3673 GN=LOC111006972 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 5.7e-47 Identity = 108/158 (68.35%), Postives = 125/158 (79.11%), Query Frame = 0
BLAST of Spg022084 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 95.5 bits (236), Expect = 7.7e-20 Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 0
BLAST of Spg022084 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 3.0e-16 Identity = 62/174 (35.63%), Postives = 87/174 (50.00%), Query Frame = 0
BLAST of Spg022084 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-15 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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