Spg022015 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg022015
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 11204841 .. 11206749 (-)
RNA-Seq ExpressionSpg022015
SyntenySpg022015
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTGTATACCAATCCCTACCTCTCGCATCGCGCCGACGACCCACATCCGCCGTGCCGGCGACCTTCTTCTGCCGCGCCGTCGAGACTCCTGCTCGCCCCACATCCTCCATTGATTCTCCTTCTGCGAGACTGTACAATTTCTCAGAAATTCAAACTAAGGTAACGACTTCATTCCCATTCCCTTATATTAGCAACAAAATGATACATTCCCCCGAGATTTTAGGGATTTTGTTTCTTCCATGCAATCCGAGAATATTACTCTCTATTATAAGCAGAGACCAAAAAAGACTAAGCCCGTGGAGGTAAGACTTTGTATTTACTCTTTAGGTTGTCTAAAACATGCTGTAATTACTCGTGTAATTGTGTTAAAAAACAGGAAGAAGTTGACACAAGCGCCGATACGGGGGAAGACCATTCTATTGAAGATGATTACTCCTCAAGCGATAGCGGAGATGAAGGAGATAGCAAGAAAAAGAAAACGGTAGACAAAAAGGTAAAAAAGATCACCCACATCATCCCCCTTGTGAATTACAAATTAGAGAATTAAACTCCCTAATTAACATCCAGGATGCGAAGAGACCCAAAGGGAAGGACAGACGGACAAAAAGGGATGAAAGTGAGGAGGTCGAATGCACCAGAGCGGTATGTACTGATAAATACTATTCCATCATTGTTGCAAACTCCTCTGGAAAGTATGTTGTGGTGTGGTCATATGAAAGTGTGTGAGAGGAGTTATATACCCCCCTGCACCTTACAATCTATGTATTGGCAAGCCTGTGTACATTGTCTGCCTGTGAACGTGTATGTATTAGTATATACATCCATGATCTCATACATTTATATACTGATATGTGCAACTACTATCTCGTACATCTATATACATATATGCTCGTACGTACGTGTGTTTGAACAGTTATATACCCTCCATTGTCTGCCTGTGAACGTGTATGTATTAGTATATACATCTATGATATCGTACGTCTGTTGTCTGTGTAGATTGAACTGTTACATACAACTATGGAATTGTTTGATGTATTTTTTTTTGGGGTAATCCATTTGTTGACTGCTTCATGCCGCTGAAAAAGATAATTTTTTACTGTTAGAAAGTCTAAGCCTAAAAAATAGGTAAATCAGGATCAAAACAAACCGCCAACCGATCCCATGTAAGTAGGGATCCATCCACCACGCAAAAAGGGGACGTCCAAAAAAAAGCCAGGAAACGGTTCCTAAAATTTCGGTAGCCACGCCTACAAAATCCGAACTTTCGTAGCCAAAAATCAAGAATGCTTTTTTTTTTGTAGTCATTTAACACAATTTCCAAAAAAAAAAAAAAACTGTTTTTAAACACTTAAAAAGTCATTCCAAAGAAGCACGAAATGGCTTGTGAGTTTTGACATTTATTTCCTAAAATATTTGCAAATTTAACATAATTAAAATAAAATATTATAAAAAATAATTTTACATGTTATTTTGATCTAAAAACTTTTAGGTTAAAATACCATTTTAGTCTATGTATGTTAGGTTTCTTTTCATTTTAGTTTTTGTACTTTAAATAAAGCTTAAAATTGGTTTAATCGTTAGTTTGAAGTTAATTTTTTTTTTTCGAAATTGGTTGAATAATCATAATAATGTTTCATGTAAAAAAAGACACAATATGAACATATTTTCAAAATTTATAAAGGATAGACTAAAAGAAATTAAATTTTATACAAAGTATAGATACTAAATCAGAGCTCTGAATCGAGAGTGTGTGGATATTTCTGAAGCCAAGGCGATGATGCTCGACATTGAAGATCTGGCGGAAAAATCGGATGTTTTATCCTTTGTGAAATGCTCAAGAGCGGGCAATCGTGTGGCGCACTCCATTGACGAGCAGCGACGGGCCTCCCTCCGGTGTCTTCTCCGTTGA

mRNA sequence

AGTGTATACCAATCCCTACCTCTCGCATCGCGCCGACGACCCACATCCGCCGTGCCGGCGACCTTCTTCTGCCGCGCCGTCGAGACTCCTGCTCGCCCCACATCCTCCATTGATTCTCCTTCTGCGAGACTGTACAATTTCTCAGAAATTCAAACTAAGGAAGAAGTTGACACAAGCGCCGATACGGGGGAAGACCATTCTATTGAAGATGATTACTCCTCAAGCGATAGCGGAGATGAAGGAGATAGCAAGAAAAAGAAAACGGTAGACAAAAAGGATGCGAAGAGACCCAAAGGGAAGGACAGACGGACAAAAAGGGATGAAAGTGAGGAGGTCGAATGCACCAGAGCGGTATGTACTGATAAATACTATTCCATCATTGTTGCAAACTCCTCTGGAAAAGCTCTGAATCGAGAGTGTGTGGATATTTCTGAAGCCAAGGCGATGATGCTCGACATTGAAGATCTGGCGGAAAAATCGGATGTTTTATCCTTTGTGAAATGCTCAAGAGCGGGCAATCGTGTGGCGCACTCCATTGACGAGCAGCGACGGGCCTCCCTCCGGTGTCTTCTCCGTTGA

Coding sequence (CDS)

AGTGTATACCAATCCCTACCTCTCGCATCGCGCCGACGACCCACATCCGCCGTGCCGGCGACCTTCTTCTGCCGCGCCGTCGAGACTCCTGCTCGCCCCACATCCTCCATTGATTCTCCTTCTGCGAGACTGTACAATTTCTCAGAAATTCAAACTAAGGAAGAAGTTGACACAAGCGCCGATACGGGGGAAGACCATTCTATTGAAGATGATTACTCCTCAAGCGATAGCGGAGATGAAGGAGATAGCAAGAAAAAGAAAACGGTAGACAAAAAGGATGCGAAGAGACCCAAAGGGAAGGACAGACGGACAAAAAGGGATGAAAGTGAGGAGGTCGAATGCACCAGAGCGGTATGTACTGATAAATACTATTCCATCATTGTTGCAAACTCCTCTGGAAAAGCTCTGAATCGAGAGTGTGTGGATATTTCTGAAGCCAAGGCGATGATGCTCGACATTGAAGATCTGGCGGAAAAATCGGATGTTTTATCCTTTGTGAAATGCTCAAGAGCGGGCAATCGTGTGGCGCACTCCATTGACGAGCAGCGACGGGCCTCCCTCCGGTGTCTTCTCCGTTGA

Protein sequence

SVYQSLPLASRRRPTSAVPATFFCRAVETPARPTSSIDSPSARLYNFSEIQTKEEVDTSADTGEDHSIEDDYSSSDSGDEGDSKKKKTVDKKDAKRPKGKDRRTKRDESEEVECTRAVCTDKYYSIIVANSSGKALNRECVDISEAKAMMLDIEDLAEKSDVLSFVKCSRAGNRVAHSIDEQRRASLRCLLR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg022015.1Spg022015.1mRNA