Spg021888 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021888
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Signal recognition particle subunit SRP68
Location	scaffold2: 13750124 .. 13757498 (+)
RNA-Seq Expression	Spg021888
Synteny	Spg021888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCATCTCAAAAGAAACGCTCTGTGGCATTCAGTTGTTGCTAGTATTTATGATGAGGATGCTGGAAGATGGTTTACGAGCTCGCTGTGCAACAATAGGTCCTCAAGCCCTTGGAATTTTGTGATTAAATGCCTGGTAAAAGTGCTAGGATATCTTCTTCTTCAAGCTTGGTAATTAGGAAGGAGTGAGCTTTTGGAACCACAATTGGCCGGCTGACAACTCCTTCAAAATTTTCCAATGACAGACTTTTGGTGAAGGATTATTGAGACGTCAATGCTTATTCTTGGGGCTATCTTTCCCTCGATCTCTTTATGACGGGAATAAATGAAGCTTGCTTACTTGCATTAAGTTCTTAATTGTCAAAACATTAATTGGCAGAATGATATGGTTATCCAGCTCGATAATGGGAGAATCTTTTTCACATACTCTGTTTTTCAATTGCTTTGCTTTGAGTATGTCTCTTATCCATAGAAGCTTGTCAAAGCATCAGGTGGGGGATTTATGAATTAGAAGACCGTTTGACAGAGAAGTGCCTAGGTGGGCTGAATTTCTGGAAAATCTGGACACAATCCTAATTGGCAACGGCTAACAGAATATGGTAGGAGTTAGATCCAAGTGGTTTTCTCTCTGTGAAATAATAAACCTAAACCCAAGGTAAGAACCCCTGGTGGACTATATTTGGAAATTCAAAATTCCAAGGAAAGTAAAATTTTTCATTTGGTACCTTCTTTATAAAAGCCTAAATACTGCAGATAAGTTACCGAGGAAACTTCCAAGTTGGGCTTTGGCTTCCTCTGTCTGCTACTTTTTCTATAAGGAGAACGAGACCTTTGATCATATTTTCCTCCCTTGCCCTTTTGCTCAAACAGCCTGGTTCTTCCTTCTGTCTGAGTTTCGTTTGGCCATTTGTCTCCCTGATCGGGTGGATCTTTGGCTTTTGGAAAGCCTAGGAGGAAAGTTGTTTAAAGCAAAAGCTAAAATTCTATGGAACTATGCGGTGAGAGCTACTCTATGACTAATTTGGAAGGAGAGTAATCAAAGAATTTTTGAAGATCAGAATGACTTCACTAGATTCTTTTTGTAAAAGTGTTAGAACTCTTGATGGTGCTCAAATCACAAAAACTTCTTTTGTAATGCTCCTTGTGATCATCAATGATTGGGCTTCGATTAGTTTTTTGGGTGGGGGTTTTCTCTATCTTTGGCGTCAAGGTTTTCTGCTTCCTTTTTGCTGCTATTACATTGTCTGTTCCTCACCAAAAAGGAATTAAAAAAATTAGATTCTTTCTGTGAAGCCTAGCCTTGGGAACTGGGAAGTATCAACATGGGAGAAGATTTAAAGGCAGAATTGTATCTATCAAGATTTTCCTACTTGCTGTCCTCTTTTTTTGTTGAGGGGAAGAGGCATAGAGTCATTTTTTGTTTAATTGCCACTTTTCCCAAAAGTTCTGGTGGTTTCTACTTGTCATTTTAATCTATCTTGGTATGCCCCTCCCTTGGTGCCACGTTGTATGGGCCTAACTTTTGTTGGCAATCCTTTCAAGCCAAGAGGAAAAGGGTGATTTGGAGTTGTGTGGTTAAATGAAGTCCTTCGGGAAGTTTGGTGGGAAAGCAACCAAAGAAATTTCCATGACAAATCAAGAAATGTGTAGGAAGTTTAGGGTATCATAGTTATTGAAGCTTCCCTTTGGTCTTTTTGCACCATTTTTTTTGTAACTATGGTTATTTTTTTGATTAAAGACGATTGAATTACTTTTTTAATCCCCTTGGTTATGGGCTGATTTCTAATCACTCTTTTGTAAATTTGTAATTTACTTTATCTAATGTAAGTTACTGTTGTTTCCTCTCTGAACTAGTTGGGTTTTTTGTTTGCTATCCTCTATTCTTTCCTGTGTGATTTCTCCCAACCATGACATGCTCTTTTTATTTTACTGGGCTACAATGTACTTATAAATAATACGAGGCCAGCCTTTTCCAGATGTGTGCTGGTATGTAGACTCTGTTGGTTTTATAAGCTTACACTGAAGCATCTGGCTAGATAAGTTCTGAAGGAATAAGTTGTGAAACAGGTTTGCGTAATAATACCCTTTTAACCAAGTGGCTTTGGAGATTTGCCCATGAGAAGGAAAGTCTTTGGAGGAGGGTCATTGGTAGTATTTATGGGGTTGATAGTCTCGGGTGGAGAACTATGGTGATCACCCAGAAAAAAGGCAGAAGATTATGGCCCAATATTCAGAGGAATTATGATTGTTTTGAGAAATTTTCTAAATTTCAGGTTGGCTGTGGGAGAAGAATTAGGTTTTGGGGTGATGCTTGGTGTGACGTGCAGCCTCTTCAACTTATTTTCCCTGACATATATGAGATCTCCCATATGAAACTTGCTTCTGTCGCAGACTGTTGGGATGATAGGAACCAAACGTGGAACCTTGGCCTTCGTAGAGGGCTGTTTGACCGTGAATTTAGCAGTTGGGTGGCCCTCATTGGCAAATTAGACTCTATCCAGATGGGAAATGGGATGGACAGAATCTCTTGGAAGCTGGAAGGTTCGGGGCTGTTCTCTACTAAATCCTTATTCCAAGCCTCCGTTGGTAAATCTCCCAAGATAAATCTGTCTCTTGTGGGAAAGATTTGGAAGCATAAGTCCCCTAAGAAAGTGAAAATCTTCCTTTGGAGCGTGGCTTACAGAAGTCTGAATACGGATGATAAAGTTCAATGGAAGCTAAAAAATTGGGCTCTCTCCCCCTCGGGATGCAGACTATGTCTAAAAGAGAGTGAGGATATTGATCACATTCTGCTTCATTGTGAGTTTGCTAGCAAGATGTGGAATTTCATTGCTGGTCTGCTGAGGTTATCTTTCCGTTTTCCGAAGAGGGTGGATGATTGGCTTGAAGAAGGGTTGCAAGCTTGGAACTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTGTGCGTTTAGAGCTTCCATTTGGCTTTTATGGAAGGAAAAAAACTCTAGAACCTTTGGTGATAAGTCGTCTTCTTTTGATTCCTTTGTAATTCTGTACAAAATACGGCCTCTTGGTGGATTTCTTCATACAAAAAGTTCTTTTGTAATTACAACTTGCTTATGGTTATTAGTGATTGACAAGCCCTTTTGAGATAGTTTTGGGAGGGGTGATCTCCACCCCGGCCTTTAGGCTGTCCTTTTTTGTGATTAATATATTCTCCTTTGATGTTTCTTATCAAAAAAAAGGAATAAGTTGTGAAACCTATTCGTGAAGAATTTCTTATTATGTTGTATTTTTCTAGGAATCTGTTAAAGGCCTGCCCTTACCATCAGGTTCATATTTTTGCACTTTTGTCATCCAGAATTCCTAATTATGTCTGCATGAAATTATCCAGCTCGGGAATTGGAAAAGGACTTGCAAGGTTCAGCAGATTCACTTCCAGCAGAGAAAAGATTGACCATTTTTGATAAGATCTTTGCAGCATACCATGAGGCAAGGAGCTCTATTCGCAGTGACTTGGTATGTGGAAGATGACATTAACCCTTTCTTTGGACTCTTTTAGAGTTTGCATCTCTACTATCTGATCTTCCAGACTTACGTTGCCAGTATTCTTTTTGTGTAGGTCAGTGCTGGAAATGCTGAAAATGTCAAAGATGATTTGAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGAACAATTGAACGCAACCAGTTATTAGTAAAAATTGCAAAAAGTAAGCTTGTTAGGCGTCATGAGGAAAAAAATGAGAAAGTTACCAAGCCAGAGGAACTTGTTCGTTTGTATGATCTTTTATTACAAGTAAGCATCTTTTTGTGTTCCTGTATCCTTTTCAGCATTTGATCTAACTGTATTTGGATGCTCTACTAAAAATAGAGGCTTTTCTGGAGTTAGCAATAGCTTTTATAATTTATTTATTTATTTTTGCAGAATATTGCTGATCTTTCTGATTTAGTCAGTTCGGGAAGAGATCGAAAGCAGGAAGAAGTGACGTTTGCTGAAGAGTGCTCGCTTAAAAGTATAGCTTTTCGCGGAGAAAGGTTTCTGCCCTTAAGTTCTTGATCTTTCTTACTGATCAGAAAAACCTCCATATTTACATTGATAATCTAACAATTTGCATTCTGGATTACCTGTTCCTTTTTCGAGCATAGAAATCTGATTGATTTATTTAATCCTTGTAAACTTGCTCAGAATGCGTGAGATTCCCAACCATTTTCCTTGACCTTGTAACTCCTTGCTTTTGGCTGTATTCTGCACGTTGTTTGTTTTACATTCTCTTGTTTTCTATTTAACCTGCCCAATTGGTATTATGCCAGCGATGACACGCCTTCCTGGCCACATCTTTTTGCAGTCTCATATCAGCTTATTTCATTTGGTGGCAAGGAGATTTAGAGATCTCTTTCTGAACAATTAGATATGAGAAGTTATAAAAGGCCCTGATCTAGATTGATAACAAAGATAGAACAGTTAGCAAATATCCCTGTATTCTTGACCAAAGAGAAACAAAAGACTGTACAATCTCCCGAATCTCTGTTTCTATGAGTGTCCTCGAAGATTTTATTATTTCTATGACTGAAGGATCTCCTAAATCTCTCAGTGCAACTAAAACTTATTCAACCCTCGAAAAAATGTTCAGCATATTTGAGTGGGGAAGATGTTCATGGCCCATCTATAACAGTTAGTATGCCCTCCAACTGAAAATAAAAAAGAAGAATTAATTCACACTTCTCGTTTCCAAAAGTGTGTACAAGTGCTTGTTATGAAACATAACCAATGTCTGGGTTCTGGACATTCTTTCCTTGGCCTCTCCACATTTTCTCATTACATCTACATCTGAAGTGGTAGGCAGATTTACATGTGTAATTGATCGAGTTTCAATTGCTCCTTCAATGTAATGTTATTTTCTTCTCTACGAGTTGTGTGTTTGCATGTTTATTCTCTGATCTTTTATGTTTCCAATCTTGTTATTTATGTCATTTGTTGTTAATTATATGTCATTACTCACTCAAGTGTGGATTAATTGATGTTTTCTGGCACTAATTTGCTGTAAATGATGAATCCTCCTCTATGTTTTTTCAGGTGCTTTTACCTGGCAAAATCATACAGTCTGGCTGGAAAAAGAGCAGAAGCTTATGTACTATACTGCCATGCTCGCTCCCTTGTTGAAGATGCCATAAAAAAATTCCACACGGCAAATATCAGTGATCCGGTATGTGTATCATGTAGAATACTCTAGTAGTATCCTAGTTAGAACATACAATCACTTGTATCATGGGCTGTTGCACTTTGATCTTTGGTAGTTCTATAATTCTATTCTGATATCTTTGGTAGATTTCACTGCTGTAGCTTGTTGCAACAGTGTGCTGGTGGAACTTCACTTCCCTCTGAGGAATATTTTCAAATCTTTGAGGTTTAGAAGCTGAATGATGGTTTTTTTCTAAGAGAACAAAAATTCAGTGAAAATGCGTCTCTTTGTTTCTTGTTTGGTTTCACAAATAGTCTATTTCTTTAGAACATTTGAAGTTGTCCTCCTTATAAAAATCAAAATTAAGAATTGTGATTTTAGGTGCACAATTTTGAAGACGAGTAAATTTCTTTTAAGCTGTTTTAAAAGTAGGTTCCCAAACAAGCACTTCTAGCATATACTTATTGAAAAACCTTTGCTTAATTTTTTGCAACAGAAGATGATCGAAGAGTTGAAGACATTGATTGAGGAATGCAGAGCTAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGGTGAAGGCTCCCGAGAATCTGTCGAAGAAGATCTCTAACTTGTCATTGACTGGAGCAGAGAAGAAGGTACTGATTACGTTTATTCTGTTTGTAGACTTTTCCTTTTTAAGATGGAACCAGATTGAATGAACTTGAATTGCTTGATGCTGGATGCAATAATACTCACTTGTAGACGAAAATTGAGAGACAGTCATCAACAACTACAATTGACCTGAGTAACAGTGTGTTTGAAATAACTTTTGAAAAAAAGTTTTTTTACATAATATCACTTTCTCTTCTCTATAAAAAAAAAAAGAATTAAAACTGTTTTAAGGTGTGGTTAGTTTAGCTTCCAGAGTGATTTTAAATAATCAAAAGTGTTTTTTTTTTAAGTCTTAATAAATAAAAAGTATTAAAAAATTGGATTAATTTTAAAACTCTTTTTGAAAAACACCTGAGAGATGAATTATCCAAAAAGTGACTTTAGGGTGATTGATCGAAAATCTTTGAAATATGTTAGAAAACAAAATATATTTATAACTAATAGAATCACTTTTGGATGTAGTGCAACCAAACAAATTTGTTATTTAAAGTACTCACAAAAGATAAGATATAAAAACATTTTTATCAAAGAAATTTTAAGAAAAAGTGCTTGAAGTGCTTAAACTAGAAGGTGTACCAAACATGTTTGATCAATTTCCTGTTGTATAGATACACCAAATTCTTATTTCTTCAATTTCCTGTTGTATATAACACCAAATTCTTATTTCTTCAATTTCCTGTTGTATAGATACACCAAATTCTTATTTCTTCCTAGCCAAGTCACGTTTCTTTTTTATTGGAAAAAGAAAGCCATGTTTTTGCAAGCACATGTTCTTATATTAGTTTACATCTGCTTGAATGCTAACATCTATCAACTCCATCTTCAATATGTTACAGTCGGTCAAATATCTCCTTCAGAGCCTCGATAACTATGAGTCTGCAATCGGCGATTCCAATACCAAGAGCGCTCCACGCATTGAAGTCTTTCCTCCCGCGTTTCAGCCGATCCCTCGGAATCCCATCGTTCTGGACCTTGCTTTTAACTTCATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGAGTTTCTTTGGCAACATTTTGTTCTTTGCTGCCTGAGTTTTTGTTTTTGCTGCTGGTTACAAGAATATAGAGACCTTGGTACTGATCCTTTAACAACTTCCCAGCCCCCTTGCGAATTTTGGGTCACAGTTAGAAGATAATGACTGTTTGTTTCTTGGTTTCTCTCGGATGTATAACAAAGATTTAGGACCAAAACTTTTCAGGATTTTTCTTAGAAGCCTGCTTGTGACTGTTACAGAATACACATTGTTTATTTTCTGATTTTGGCGATTAATTTTGAATTCATTGTGGATATTTTAGATGCCGATTCGCAAATTCTGTCGTGATACAATTATTTAGCTCACCTATGGATGATTGTATTGATTTGGCCAATGCTAAGCTACCATTAAAAACATATTGTTTTGCTGATTAGAGCTCTCAGTCTCATGAGCTGCCATAAAAAAAGGAAAAACATTTTGAG

mRNA sequence

ATGTTTCATCTCAAAAGAAACGCTCTGTGGCATTCAGTTGTTGCTAGTATTTATGATGAGGATGCTGGAAGATGGTTTACGAGCTCGCTGTGCAACAATAGGTCCTCAAGCCCTTGGAATTTTGTGATTAAATGCCTGGTAAAAGTGCTAGGATATCTTCTTCTTCAAGCTTGCCTAAATACTGCAGATAAGTTACCGAGGAAACTTCCAAGTTGGGCTTTGGCTTCCTCTGTCTGCTACTTTTTCTATAAGGAGAACGAGACCTTTGATCATATTTTCCTCCCTTGCCCTTTTGCTCAAACAGCCTGGTTCTTCCTTCTGTCTGAGTTTCGTTTGGCCATTTGTCTCCCTGATCGGGTGGATCTTTGGCTTTTGGAAAGCCTAGGAGGAAAGTTGTTTAAAGCAAAAGCTAAAATTCTATGGAACTATGCGGTTGGCTGTGGGAGAAGAATTAGGTTTTGGGGTGATGCTTGGTGTGACGTGCAGCCTCTTCAACTTATTTTCCCTGACATATATGAGATCTCCCATATGAAACTTGCTTCTGTCGCAGACTGTTGGGATGATAGGAACCAAACGTGGAACCTTGGCCTTCGTAGAGGGCTGTTTGACCGTGAATTTAGCAGTTGGGTGGCCCTCATTGGCAAATTAGACTCTATCCAGATGGGAAATGGGATGGACAGAATCTCTTGGAAGCTGGAAGGTTCGGGGCTGTTCTCTACTAAATCCTTATTCCAAGCCTCCGTTGGTAAATCTCCCAAGATAAATCTGTCTCTTGTGGGAAAGATTTGGAAGCATAAGTCCCCTAAGAAAGTGAAAATCTTCCTTTGGAGCGTGGCTTACAGAAGTCTGAATACGGATGATAAAGTTCAATGGAAGCTAAAAAATTGGGCTCTCTCCCCCTCGGGATGCAGACTATGTCTAAAAGAGAGTGAGGATATTGATCACATTCTGCTTCATTGTGAGTTTGCTAGCAAGATGTGGAATTTCATTGCTGGTCTGCTGAGGTTATCTTTCCGTTTTCCGAAGAGGGTGGATGATTGGCTTGAAGAAGGGTTGCAAGCTTGGAACTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTCTCGGGAATTGGAAAAGGACTTGCAAGGTTCAGCAGATTCACTTCCAGCAGAGAAAAGATTGACCATTTTTGATAAGATCTTTGCAGCATACCATGAGGCAAGGAGCTCTATTCGCAGTGACTTGGTCAGTGCTGGAAATGCTGAAAATGTCAAAGATGATTTGAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGAACAATTGAACGCAACCAGTTATTAGTAAAAATTGCAAAAAGTAAGCTTGTTAGGCGTCATGAGGAAAAAAATGAGAAAGTTACCAAGCCAGAGGAACTTGTTCGTTTGTATGATCTTTTATTACAAAATATTGCTGATCTTTCTGATTTAGTCAGTTCGGGAAGAGATCGAAAGCAGGAAGAAGTGACGTTTGCTGAAGAGTGCTCGCTTAAAAGTATAGCTTTTCGCGGAGAAAGGTGCTTTTACCTGGCAAAATCATACAGTCTGGCTGGAAAAAGAGCAGAAGCTTATGTACTATACTGCCATGCTCGCTCCCTTGTTGAAGATGCCATAAAAAAATTCCACACGGCAAATATCAGTGATCCGAAGATGATCGAAGAGTTGAAGACATTGATTGAGGAATGCAGAGCTAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGGTGAAGGCTCCCGAGAATCTGTCGAAGAAGATCTCTAACTTGTCATTGACTGGAGCAGAGAAGAAGTCGGTCAAATATCTCCTTCAGAGCCTCGATAACTATGAGTCTGCAATCGGCGATTCCAATACCAAGAGCGCTCCACGCATTGAAGTCTTTCCTCCCGCGTTTCAGCCGATCCCTCGGAATCCCATCGTTCTGGACCTTGCTTTTAACTTCATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGA

Coding sequence (CDS)

ATGTTTCATCTCAAAAGAAACGCTCTGTGGCATTCAGTTGTTGCTAGTATTTATGATGAGGATGCTGGAAGATGGTTTACGAGCTCGCTGTGCAACAATAGGTCCTCAAGCCCTTGGAATTTTGTGATTAAATGCCTGGTAAAAGTGCTAGGATATCTTCTTCTTCAAGCTTGCCTAAATACTGCAGATAAGTTACCGAGGAAACTTCCAAGTTGGGCTTTGGCTTCCTCTGTCTGCTACTTTTTCTATAAGGAGAACGAGACCTTTGATCATATTTTCCTCCCTTGCCCTTTTGCTCAAACAGCCTGGTTCTTCCTTCTGTCTGAGTTTCGTTTGGCCATTTGTCTCCCTGATCGGGTGGATCTTTGGCTTTTGGAAAGCCTAGGAGGAAAGTTGTTTAAAGCAAAAGCTAAAATTCTATGGAACTATGCGGTTGGCTGTGGGAGAAGAATTAGGTTTTGGGGTGATGCTTGGTGTGACGTGCAGCCTCTTCAACTTATTTTCCCTGACATATATGAGATCTCCCATATGAAACTTGCTTCTGTCGCAGACTGTTGGGATGATAGGAACCAAACGTGGAACCTTGGCCTTCGTAGAGGGCTGTTTGACCGTGAATTTAGCAGTTGGGTGGCCCTCATTGGCAAATTAGACTCTATCCAGATGGGAAATGGGATGGACAGAATCTCTTGGAAGCTGGAAGGTTCGGGGCTGTTCTCTACTAAATCCTTATTCCAAGCCTCCGTTGGTAAATCTCCCAAGATAAATCTGTCTCTTGTGGGAAAGATTTGGAAGCATAAGTCCCCTAAGAAAGTGAAAATCTTCCTTTGGAGCGTGGCTTACAGAAGTCTGAATACGGATGATAAAGTTCAATGGAAGCTAAAAAATTGGGCTCTCTCCCCCTCGGGATGCAGACTATGTCTAAAAGAGAGTGAGGATATTGATCACATTCTGCTTCATTGTGAGTTTGCTAGCAAGATGTGGAATTTCATTGCTGGTCTGCTGAGGTTATCTTTCCGTTTTCCGAAGAGGGTGGATGATTGGCTTGAAGAAGGGTTGCAAGCTTGGAACTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTCTCGGGAATTGGAAAAGGACTTGCAAGGTTCAGCAGATTCACTTCCAGCAGAGAAAAGATTGACCATTTTTGATAAGATCTTTGCAGCATACCATGAGGCAAGGAGCTCTATTCGCAGTGACTTGGTCAGTGCTGGAAATGCTGAAAATGTCAAAGATGATTTGAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGAACAATTGAACGCAACCAGTTATTAGTAAAAATTGCAAAAAGTAAGCTTGTTAGGCGTCATGAGGAAAAAAATGAGAAAGTTACCAAGCCAGAGGAACTTGTTCGTTTGTATGATCTTTTATTACAAAATATTGCTGATCTTTCTGATTTAGTCAGTTCGGGAAGAGATCGAAAGCAGGAAGAAGTGACGTTTGCTGAAGAGTGCTCGCTTAAAAGTATAGCTTTTCGCGGAGAAAGGTGCTTTTACCTGGCAAAATCATACAGTCTGGCTGGAAAAAGAGCAGAAGCTTATGTACTATACTGCCATGCTCGCTCCCTTGTTGAAGATGCCATAAAAAAATTCCACACGGCAAATATCAGTGATCCGAAGATGATCGAAGAGTTGAAGACATTGATTGAGGAATGCAGAGCTAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGGTGAAGGCTCCCGAGAATCTGTCGAAGAAGATCTCTAACTTGTCATTGACTGGAGCAGAGAAGAAGTCGGTCAAATATCTCCTTCAGAGCCTCGATAACTATGAGTCTGCAATCGGCGATTCCAATACCAAGAGCGCTCCACGCATTGAAGTCTTTCCTCCCGCGTTTCAGCCGATCCCTCGGAATCCCATCGTTCTGGACCTTGCTTTTAACTTCATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGA

Protein sequence

MFHLKRNALWHSVVASIYDEDAGRWFTSSLCNNRSSSPWNFVIKCLVKVLGYLLLQACLNTADKLPRKLPSWALASSVCYFFYKENETFDHIFLPCPFAQTAWFFLLSEFRLAICLPDRVDLWLLESLGGKLFKAKAKILWNYAVGCGRRIRFWGDAWCDVQPLQLIFPDIYEISHMKLASVADCWDDRNQTWNLGLRRGLFDREFSSWVALIGKLDSIQMGNGMDRISWKLEGSGLFSTKSLFQASVGKSPKINLSLVGKIWKHKSPKKVKIFLWSVAYRSLNTDDKVQWKLKNWALSPSGCRLCLKESEDIDHILLHCEFASKMWNFIAGLLRLSFRFPKRVDDWLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG

Homology

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BLAST of Spg021888 vs. NCBI nr
Match: XP_008450345.1 (PREDICTED: signal recognition particle subunit SRP68 isoform X1 [Cucumis melo])

HSP 1 Score: 576.6 bits (1485), Expect = 2.8e-160
Identity = 297/334 (88.92%), Postives = 315/334 (94.31%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRS 406
           WL       N + +  ++  +RELEKDLQGSADSLP EK L+IFDKIFAAYHEARSSIRS
Sbjct: 262 WLGHRFPISNAKTRVSILK-ARELEKDLQGSADSLPVEKGLSIFDKIFAAYHEARSSIRS 321

Query: 407 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPE 466
           DLVSAGNAE+VKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPE
Sbjct: 322 DLVSAGNAESVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPE 381

Query: 467 ELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAG 526
           ELVRLYDLLLQNIADLSDLVSSGRDR+QEEVTFAEECSLKS+AFRGERCFYLAKSYSLAG
Sbjct: 382 ELVRLYDLLLQNIADLSDLVSSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAG 441

Query: 527 KRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEV 586
           KRAEAYVLYCHARSL+EDAI+KFHTANISDPK+IEELKTLIEECRANSCIEHATGIIEEV
Sbjct: 442 KRAEAYVLYCHARSLIEDAIQKFHTANISDPKLIEELKTLIEECRANSCIEHATGIIEEV 501

Query: 587 KAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPR 646
           KAPENLSKKISN+SLTGAEKKS KYLLQSL+NYESA+GDSN K+AP IEVFPPAFQ IPR
Sbjct: 502 KAPENLSKKISNMSLTGAEKKSAKYLLQSLNNYESAVGDSNIKTAPHIEVFPPAFQVIPR 561

Query: 647 NPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 681
           NPIVLD+AFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 562 NPIVLDIAFNFIDFPSLENRMKKDRKGFISRLWG 594

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BLAST of Spg021888 vs. NCBI nr
Match: KAA0056008.1 (signal recognition particle subunit SRP68 isoform X1 [Cucumis melo var. makuwa] >TYK27696.1 signal recognition particle subunit SRP68 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 575.9 bits (1483), Expect = 4.7e-160
Identity = 294/314 (93.63%), Postives = 308/314 (98.09%), Query Frame = 0


Query: 367 SRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDK 426
           +RELEKDLQGSADSLP EKRL+IFDKIFAAYHEARSSIRSDLVSAGNAE+VKDDLSGLDK
Sbjct: 24  ARELEKDLQGSADSLPVEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAESVKDDLSGLDK 83

Query: 427 AVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPEELVRLYDLLLQNIADLSDLV 486
           AVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPEELVRLYDLLLQNIADLSDLV
Sbjct: 84  AVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLV 143

Query: 487 SSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAI 546
           SSGRDR+QEEVTFAEECSLKS+AFRGERCFYLAKSYSLAGKRAEAYVLYCHARSL+EDAI
Sbjct: 144 SSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLIEDAI 203

Query: 547 KKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNLSLTGAEK 606
           +KFHTANISDPK+IEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISN+SLTGAEK
Sbjct: 204 QKFHTANISDPKLIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNMSLTGAEK 263

Query: 607 KSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPRNPIVLDLAFNFIDFPSLENR 666
           KS KYLLQSL+NYESA+GDSN K+AP IE FPPAFQ IPRNPIVLD+AFNFIDFPSLENR
Sbjct: 264 KSAKYLLQSLNNYESAVGDSNIKTAPHIEAFPPAFQAIPRNPIVLDIAFNFIDFPSLENR 323

Query: 667 MKKDRKGFISRLWG 681
           MKKDRKGFISRLWG
Sbjct: 324 MKKDRKGFISRLWG 337

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BLAST of Spg021888 vs. NCBI nr
Match: KAG7023831.1 (Signal recognition particle subunit SRP68 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 575.5 bits (1482), Expect = 6.2e-160
Identity = 299/334 (89.52%), Postives = 314/334 (94.01%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRS 406
           WL       N + +  ++  +RELEKDLQGSADSLPAEKRL+IFDKIFAAYHEARSSIRS
Sbjct: 218 WLGHRFPISNAKTRVAILK-ARELEKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRS 277

Query: 407 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPE 466
           DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPE
Sbjct: 278 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPE 337

Query: 467 ELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAG 526
           ELVRLYDLLLQNIADLSDLVSSGRDR+QEEV FAEECSLKSIAFRGERCFYLAKSYSLAG
Sbjct: 338 ELVRLYDLLLQNIADLSDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAG 397

Query: 527 KRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEV 586
           KRAEAYVLYCHARSLVEDAI+KF T NISDPK+IEELKTLIEECRANSCIEHATGIIEEV
Sbjct: 398 KRAEAYVLYCHARSLVEDAIQKFRTENISDPKIIEELKTLIEECRANSCIEHATGIIEEV 457

Query: 587 KAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPR 646
           KAPENLSKKISN+SLTGAEKKSVKYLLQSLDNYESA+GDSN K+AP IE FPPAF+ IPR
Sbjct: 458 KAPENLSKKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPR 517

Query: 647 NPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 681
           NPIVLDLAFN+IDFPSLENRMKKDRKGFISRLWG
Sbjct: 518 NPIVLDLAFNYIDFPSLENRMKKDRKGFISRLWG 550

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BLAST of Spg021888 vs. NCBI nr
Match: XP_023516487.1 (signal recognition particle subunit SRP68-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.5 bits (1482), Expect = 6.2e-160
Identity = 299/334 (89.52%), Postives = 314/334 (94.01%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRS 406
           WL       N + +  ++  +RELEKDLQGSADSLPAEKRL+IFDKIFAAYHEARSSIRS
Sbjct: 262 WLGHRFPISNAKTRVAILK-ARELEKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRS 321

Query: 407 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPE 466
           DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPE
Sbjct: 322 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPE 381

Query: 467 ELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAG 526
           ELVRLYDLLLQNIADLSDLVSSGRDR+QEEV FAEECSLKSIAFRGERCFYLAKSYSLAG
Sbjct: 382 ELVRLYDLLLQNIADLSDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAG 441

Query: 527 KRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEV 586
           KRAEAYVLYCHARSLVEDAI+KF T NISDPK+IEELKTLIEECRANSCIEHATGIIEEV
Sbjct: 442 KRAEAYVLYCHARSLVEDAIQKFRTENISDPKIIEELKTLIEECRANSCIEHATGIIEEV 501

Query: 587 KAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPR 646
           KAPENLSKKISN+SLTGAEKKSVKYLLQSLDNYESA+GDSN K+AP IE FPPAF+ IPR
Sbjct: 502 KAPENLSKKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPR 561

Query: 647 NPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 681
           NPIVLDLAFN+IDFPSLENRMKKDRKGFISRLWG
Sbjct: 562 NPIVLDLAFNYIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Spg021888 vs. NCBI nr
Match: XP_011660162.1 (signal recognition particle subunit SRP68 isoform X1 [Cucumis sativus] >KGN66541.1 hypothetical protein Csa_007468 [Cucumis sativus])

HSP 1 Score: 574.7 bits (1480), Expect = 1.0e-159
Identity = 295/334 (88.32%), Postives = 313/334 (93.71%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRS 406
           WL       N + +  ++  +RELEKDLQ SADSLPAEKRL+IFDKIFAAYHEARSSIRS
Sbjct: 262 WLGHRFPISNAKTRVSILK-ARELEKDLQSSADSLPAEKRLSIFDKIFAAYHEARSSIRS 321

Query: 407 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPE 466
           DLVSAGNAE+VKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPE
Sbjct: 322 DLVSAGNAESVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPE 381

Query: 467 ELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAG 526
           ELVRLYDLLLQNIADLSDLVSSGRDR+QEEVTFAEECSLKS+AFRGERCFYLAKSYSLAG
Sbjct: 382 ELVRLYDLLLQNIADLSDLVSSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAG 441

Query: 527 KRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEV 586
           KRAEAYVLYCHARSL+EDAI+KF TANISDPK+IEELKTLIEECR NSC+EHATGIIEE 
Sbjct: 442 KRAEAYVLYCHARSLIEDAIQKFRTANISDPKLIEELKTLIEECRVNSCVEHATGIIEEA 501

Query: 587 KAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPR 646
           KAPENLSKKISN+SLTGAEKKS KYLLQSLDNYESA+GDSN K+APRIE FPPAFQ IPR
Sbjct: 502 KAPENLSKKISNMSLTGAEKKSAKYLLQSLDNYESAVGDSNIKTAPRIEAFPPAFQAIPR 561

Query: 647 NPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 681
           NPIVLD+AFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 562 NPIVLDIAFNFIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Spg021888 vs. ExPASy Swiss-Prot
Match: Q8BMA6 (Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-24
Identity = 115/441 (26.08%), Postives = 204/441 (46.26%), Query Frame = 0


Query: 276 WSVAYRSLNTDDKVQWKLKNWALSPSGCRLCLKESEDIDHILLHCEFASKMWNFIAGLLR 335
           W  A  + N    +  KL + A +     L  +  E+I   + +C +     + I  L++
Sbjct: 203 WKSAIEAFNKCKTIYEKLAS-AFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQ 262

Query: 336 LSFRFPKRVDDWLEEGLQAWNLRKKAKVIAGSRELEKD--------------LQGSADSL 395
           +  R     +  L E L+A   + +AK  A   E+E                L G AD+ 
Sbjct: 263 MRLR-SGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNE 322

Query: 396 PA-------EKRLTIFDKIFAAYHEARSSIRSDLVS-------AGNAENVK-DDLSGLDK 455
            A       E +  +F+ + +   +A  ++R +L         A + E+ K  +L  L  
Sbjct: 323 AAIVQAESEETKERLFESMLSECRDALQAVREELKPDQKQRDYALDGESGKVSNLQYLHS 382

Query: 456 AVSAVLGQRTIERNQLLVK-IAKSKLVRRHEEKNEKVTKPEELVRLYDLLLQNIADLSDL 515
            ++ +     I RN+ + K + ++ L ++ E+ +++  +P++L+RLYD++LQN+ +L  L
Sbjct: 383 YLTYIKLSTAIRRNENMAKGLHRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLVELLQL 442

Query: 516 VSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDA 575
                DR     TF +E SLK++ F+  RCF++A+SY L  K +EA VLY        + 
Sbjct: 443 PGLEEDR-----TFQKEISLKTLVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKYANE- 502

Query: 576 IKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNLSLTGAE 635
           +     A+ +  K + +++ LI + R+  C   A  I++            +N S     
Sbjct: 503 VSSHGGASKNSLKDLPDVQELITQVRSEKCSLQAAAILD------------ANDSHQTDT 562

Query: 636 KKSVKYLLQSLDNYESAIGDSN--TKSAPRIEVFPPAFQPIPRNPIVLDLAFNFIDFPSL 681
              VK     ++ +ES   D +  TK A  +  FPP FQPIP  P+  DLA N + FP L
Sbjct: 563 SSQVKDNTPLVERFESFCLDPSLVTKQANLVH-FPPGFQPIPCKPLFFDLALNHVAFPPL 622

[Close]

BLAST of Spg021888 vs. ExPASy Swiss-Prot
Match: Q00004 (Signal recognition particle subunit SRP68 OS=Canis lupus familiaris OX=9615 GN=SRP68 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 6.7e-24
Identity = 110/445 (24.72%), Postives = 196/445 (44.04%), Query Frame = 0


Query: 276 WSVAYRSLNTDDKVQWKLKNWALSPSGCRLCLKESEDIDHILLHCEFASKMWNFIAGLLR 335
           W  A  + N    +  KL + A +     L  +  E+I   + +C +     + I  L++
Sbjct: 201 WKAAIEAFNKCKTIYEKLAS-AFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQ 260

Query: 336 LSFRFPKRVDDWLEEGLQAWNLRKKAKVIAGSRELEKD--------------LQGSADSL 395
           +  R     +  L E L+A   + +AK  A   E+E                L G AD+ 
Sbjct: 261 MRLR-SGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNE 320

Query: 396 PA-------EKRLTIFDKIFAAYHEARSSIRSDL--------VSAGNAENVKDDLSGLDK 455
            A       E +  +F+ + +   +A  ++R +L         +         +L  L  
Sbjct: 321 AAIAQAESEETKERLFESMLSECRDAIQAVREELKPDQKQRDYTLDGESGKVSNLQYLHS 380

Query: 456 AVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPEELVRLYDLLLQNIADLSDLV 515
            ++ +     I RN+ + K  +  L ++ E+++++  +P++L+RLYD++LQN+ +L  L 
Sbjct: 381 YLTYIKLSTAIRRNENMAKGLQKALQQQPEDESKRSPRPQDLIRLYDIILQNLVELLQLP 440

Query: 516 SSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAI 575
               DR      F +E  LK++ F+  RCF++A+SY L  K +EA VLY        D +
Sbjct: 441 GLEEDR-----AFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLY--------DRV 500

Query: 576 KKFHTANISDP-------KMIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNL 635
            K+     SD        K + +++ LI + R+  C   A  I         L    S+ 
Sbjct: 501 LKYANEVNSDAGAFRNSLKDLPDVQELITQVRSEKCSLQAAAI---------LDASDSHQ 560

Query: 636 SLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPRNPIVLDLAFNFID 681
             T ++ K  K L++  + +   +  S       +  FPP FQPIP  P+  DLA N + 
Sbjct: 561 PETSSQVKDNKPLVERFETF--CLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVA 619

[Close]

BLAST of Spg021888 vs. ExPASy Swiss-Prot
Match: Q9UHB9 (Signal recognition particle subunit SRP68 OS=Homo sapiens OX=9606 GN=SRP68 PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-22
Identity = 109/447 (24.38%), Postives = 201/447 (44.97%), Query Frame = 0


Query: 276 WSVAYRSLNTDDKVQWKLKNWALSPSGCRLCLKESEDIDHILLHCEFASKMWNFIAGLLR 335
           W  A  + N    +  KL + A +     L  +  E+I   + +C +     + I  L++
Sbjct: 204 WKAAIEAFNKCKTIYEKLAS-AFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQ 263

Query: 336 LSFRFPKRVDDWLEEGLQAWNLRKKAKVIAGSRELEKD--------------LQGSADSL 395
           +  R     +  L E L+A   + +AK  A   E+E                L G AD+ 
Sbjct: 264 MRLR-SGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNE 323

Query: 396 PA-------EKRLTIFDKIFAAYHEARSSIRSDL---------VSAGNAENVKDDLSGLD 455
            A       E +  +F+ + +   +A   +R +L         +  G    V  +L  L 
Sbjct: 324 AAIVQAESEETKERLFESMLSECRDAIQVVREELKPDQKQRDYILEGEPGKV-SNLQYLH 383

Query: 456 KAVSAVLGQRTIERNQLLVK-IAKSKLVRRHEEKNEKVTKPEELVRLYDLLLQNIADLSD 515
             ++ +     I+RN+ + K + ++ L ++ E+ +++  +P++L+RLYD++LQN+ +L  
Sbjct: 384 SYLTYIKLSTAIKRNENMAKGLQRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLVELLQ 443

Query: 516 LVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVED 575
           L        +E+  F +E  LK++ F+  RCF++A+SY L  K +EA VLY        D
Sbjct: 444 LPG-----LEEDKAFQKEIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLY--------D 503

Query: 576 AIKKFHTANISDP-------KMIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKIS 635
            + K+     SD        K + +++ LI + R+  C   A  I++   A +       
Sbjct: 504 RVLKYANEVNSDAGAFKNSLKDLPDVQELITQVRSEKCSLQAAAILDANDAHQT------ 563

Query: 636 NLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPRNPIVLDLAFNF 681
               + ++ K  K L++  + +   +  S       +  FPP FQPIP  P+  DLA N 
Sbjct: 564 --ETSSSQVKDNKPLVERFETF--CLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNH 623

[Close]

BLAST of Spg021888 vs. ExPASy Swiss-Prot
Match: Q9VSS2 (Signal recognition particle subunit SRP68 OS=Drosophila melanogaster OX=7227 GN=Srp68 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.0e-17
Identity = 81/342 (23.68%), Postives = 162/342 (47.37%), Query Frame = 0


Query: 350 EGLQA--WNLRK------KAKV-IAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEA 409
           EGLQ   W  RK      K ++ +  ++EL+K L   A +   + ++ + ++I     +A
Sbjct: 263 EGLQTIDWRGRKVTVRPEKVRLFLLSAQELDKSL---AKTTKQDAKIELIERILMDCKDA 322

Query: 410 RSSIRSDLVSAGNAENVK--DDLSGLD---KAVSAVLGQRTIERNQLLVKIAKSKLVRRH 469
             ++R ++       ++     +SG+      +S +   RT++RN  LV+ AK      +
Sbjct: 323 IQAVRDEIKQDPKLRSLTTGQTVSGVQYLLAYLSYIRHSRTLQRNLCLVEQAKLNFYDPN 382

Query: 470 EEKNEKV-----TKPEELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAF 529
            +  + V      +P++L RLY+++LQN+ ++  +     +  +++ T+  E    +I F
Sbjct: 383 LQSQQNVGDGKRVRPQDLARLYEIILQNVTEMQQI-----NGLEDDATYQSEVENLAITF 442

Query: 530 RGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEEC 589
           +  RC+Y+A +     K  EA  LY  A +   +A+K   +      + ++++ + I+ C
Sbjct: 443 KAFRCYYIALTLIDIKKWKEAVALYERASNYATEALKGKSSPEFQLQEELKKVVSAIDGC 502

Query: 590 RANSCIEHATGIIEEVKAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKS 649
           + ++   HA  ++E+  + E+          T   +K+ K L + L  Y+     S    
Sbjct: 503 KFSA---HAYSVLEDDNSEES--------GTTTKSQKTTKPLYERLSLYKE--DQSLHTK 562

Query: 650 APRIEVFPPAFQPIPRNPIVLDLAFNFIDFPSLENRMKKDRK 673
           AP +    P  +PIP  PI  DLA  +++ PSLE +++   K
Sbjct: 563 APNVFKLTPDMEPIPCKPIFFDLAMTYVELPSLEGKLESPGK 583

[Close]

BLAST of Spg021888 vs. ExPASy Swiss-Prot
Match: Q20822 (Probable signal recognition particle subunit SRP68 OS=Caenorhabditis elegans OX=6239 GN=srpa-68 PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 2.4e-13
Identity = 77/322 (23.91%), Postives = 145/322 (45.03%), Query Frame = 0


Query: 359 KKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRSDLVSAGNAENVK 418
           K  +V+   ++ E +L   A     ++++ +F+K  A   +A   I SD++   ++EN  
Sbjct: 282 KAKQVVQEWKQTEVEL---AQCQTPKEKMALFEKATADTRDAIDRI-SDIIRRKSSENAD 341

Query: 419 DDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPEELVRLYDLLLQN 478
             +    KA    L         L +             K+EK +KP++L+RLYD +++ 
Sbjct: 342 TTVLQSIKAYLEFLKMNGTASRYLAI---------IDNTKSEKKSKPQDLLRLYDSVIEI 401

Query: 479 IADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHA 538
             +++++  +  D+        +   +K   +R  RCFY+A SYS   K +EA  L+   
Sbjct: 402 YKEVAEIPGADHDK-----NLIQAFEVKVEYYRAFRCFYMASSYSALHKYSEAAALFDRT 461

Query: 539 RSLVEDA---IKKFHTANI---SDPKMIEELKTLIEECRANSCIEHATGIIEEVKAPENL 598
            S V+DA   +KK  +++         + EL++ +E  +             +VK    L
Sbjct: 462 VSRVQDAEGKLKKLKSSSFITNETQSSLNELRSEVESAKVTVRAARLASAAGDVKTDSEL 521

Query: 599 SKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEV--FPPAFQPIPRNPIV 658
           +K I             + LL++++ +      ++ K    I V   PPAF P+P  PI 
Sbjct: 522 AKIIDK-----------RPLLETVNEWRQWDVRNSLKDKKTIPVASLPPAFIPMPNKPIF 574

Query: 659 LDLAFNFIDFPSLENRMKKDRK 673
            DLA   +  P++++R++K +K
Sbjct: 582 FDLANFHLTMPNVDDRLEKLQK 574

[Close]

BLAST of Spg021888 vs. ExPASy TrEMBL
Match: A0A1S3BNF0 (Signal recognition particle subunit SRP68 OS=Cucumis melo OX=3656 GN=LOC103491982 PE=3 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 1.3e-160
Identity = 297/334 (88.92%), Postives = 315/334 (94.31%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRS 406
           WL       N + +  ++  +RELEKDLQGSADSLP EK L+IFDKIFAAYHEARSSIRS
Sbjct: 262 WLGHRFPISNAKTRVSILK-ARELEKDLQGSADSLPVEKGLSIFDKIFAAYHEARSSIRS 321

Query: 407 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPE 466
           DLVSAGNAE+VKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPE
Sbjct: 322 DLVSAGNAESVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPE 381

Query: 467 ELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAG 526
           ELVRLYDLLLQNIADLSDLVSSGRDR+QEEVTFAEECSLKS+AFRGERCFYLAKSYSLAG
Sbjct: 382 ELVRLYDLLLQNIADLSDLVSSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAG 441

Query: 527 KRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEV 586
           KRAEAYVLYCHARSL+EDAI+KFHTANISDPK+IEELKTLIEECRANSCIEHATGIIEEV
Sbjct: 442 KRAEAYVLYCHARSLIEDAIQKFHTANISDPKLIEELKTLIEECRANSCIEHATGIIEEV 501

Query: 587 KAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPR 646
           KAPENLSKKISN+SLTGAEKKS KYLLQSL+NYESA+GDSN K+AP IEVFPPAFQ IPR
Sbjct: 502 KAPENLSKKISNMSLTGAEKKSAKYLLQSLNNYESAVGDSNIKTAPHIEVFPPAFQVIPR 561

Query: 647 NPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 681
           NPIVLD+AFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 562 NPIVLDIAFNFIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Spg021888 vs. ExPASy TrEMBL
Match: A0A5A7ULQ1 (Signal recognition particle subunit SRP68 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00280 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 2.3e-160
Identity = 294/314 (93.63%), Postives = 308/314 (98.09%), Query Frame = 0


Query: 367 SRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDK 426
           +RELEKDLQGSADSLP EKRL+IFDKIFAAYHEARSSIRSDLVSAGNAE+VKDDLSGLDK
Sbjct: 24  ARELEKDLQGSADSLPVEKRLSIFDKIFAAYHEARSSIRSDLVSAGNAESVKDDLSGLDK 83

Query: 427 AVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPEELVRLYDLLLQNIADLSDLV 486
           AVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPEELVRLYDLLLQNIADLSDLV
Sbjct: 84  AVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLV 143

Query: 487 SSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLVEDAI 546
           SSGRDR+QEEVTFAEECSLKS+AFRGERCFYLAKSYSLAGKRAEAYVLYCHARSL+EDAI
Sbjct: 144 SSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAGKRAEAYVLYCHARSLIEDAI 203

Query: 547 KKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNLSLTGAEK 606
           +KFHTANISDPK+IEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISN+SLTGAEK
Sbjct: 204 QKFHTANISDPKLIEELKTLIEECRANSCIEHATGIIEEVKAPENLSKKISNMSLTGAEK 263

Query: 607 KSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPRNPIVLDLAFNFIDFPSLENR 666
           KS KYLLQSL+NYESA+GDSN K+AP IE FPPAFQ IPRNPIVLD+AFNFIDFPSLENR
Sbjct: 264 KSAKYLLQSLNNYESAVGDSNIKTAPHIEAFPPAFQAIPRNPIVLDIAFNFIDFPSLENR 323

Query: 667 MKKDRKGFISRLWG 681
           MKKDRKGFISRLWG
Sbjct: 324 MKKDRKGFISRLWG 337

[Close]

BLAST of Spg021888 vs. ExPASy TrEMBL
Match: A0A0A0M2X1 (Signal recognition particle subunit SRP68 OS=Cucumis sativus OX=3659 GN=Csa_1G627500 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 5.1e-160
Identity = 295/334 (88.32%), Postives = 313/334 (93.71%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRS 406
           WL       N + +  ++  +RELEKDLQ SADSLPAEKRL+IFDKIFAAYHEARSSIRS
Sbjct: 262 WLGHRFPISNAKTRVSILK-ARELEKDLQSSADSLPAEKRLSIFDKIFAAYHEARSSIRS 321

Query: 407 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPE 466
           DLVSAGNAE+VKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPE
Sbjct: 322 DLVSAGNAESVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPE 381

Query: 467 ELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAG 526
           ELVRLYDLLLQNIADLSDLVSSGRDR+QEEVTFAEECSLKS+AFRGERCFYLAKSYSLAG
Sbjct: 382 ELVRLYDLLLQNIADLSDLVSSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAG 441

Query: 527 KRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEV 586
           KRAEAYVLYCHARSL+EDAI+KF TANISDPK+IEELKTLIEECR NSC+EHATGIIEE 
Sbjct: 442 KRAEAYVLYCHARSLIEDAIQKFRTANISDPKLIEELKTLIEECRVNSCVEHATGIIEEA 501

Query: 587 KAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPR 646
           KAPENLSKKISN+SLTGAEKKS KYLLQSLDNYESA+GDSN K+APRIE FPPAFQ IPR
Sbjct: 502 KAPENLSKKISNMSLTGAEKKSAKYLLQSLDNYESAVGDSNIKTAPRIEAFPPAFQAIPR 561

Query: 647 NPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 681
           NPIVLD+AFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 562 NPIVLDIAFNFIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Spg021888 vs. ExPASy TrEMBL
Match: A0A6J1H9B0 (Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC111461728 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 6.6e-160
Identity = 298/334 (89.22%), Postives = 314/334 (94.01%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRS 406
           WL       N + +  ++  +RELEKDLQGSADSLPAEKRL+IFDKIFAAYHEARSSIRS
Sbjct: 262 WLGHRFPISNAKTRVAILK-ARELEKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRS 321

Query: 407 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPE 466
           DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPE
Sbjct: 322 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPE 381

Query: 467 ELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAG 526
           ELVRLYDLLLQNIADLSDLVSSGRD++QEEV FAEECSLKSIAFRGERCFYLAKSYSLAG
Sbjct: 382 ELVRLYDLLLQNIADLSDLVSSGRDKRQEEVVFAEECSLKSIAFRGERCFYLAKSYSLAG 441

Query: 527 KRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEV 586
           KRAEAYVLYCHARSLVEDAI+KF T NISDPK+IEELKTLIEECRANSCIEHATGIIEEV
Sbjct: 442 KRAEAYVLYCHARSLVEDAIQKFRTENISDPKIIEELKTLIEECRANSCIEHATGIIEEV 501

Query: 587 KAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPR 646
           KAPENLSKKISN+SLTGAEKKSVKYLLQSLDNYESA+GDSN K+AP IE FPPAF+ IPR
Sbjct: 502 KAPENLSKKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPR 561

Query: 647 NPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 681
           NPIVLDLAFN+IDFPSLENRMKKDRKGFISRLWG
Sbjct: 562 NPIVLDLAFNYIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Spg021888 vs. ExPASy TrEMBL
Match: A0A6J1JC09 (Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC111485409 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 8.7e-160
Identity = 298/334 (89.22%), Postives = 313/334 (93.71%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQGSADSLPAEKRLTIFDKIFAAYHEARSSIRS 406
           WL       N + +  ++  +RELEKDLQGSADSLPAEKRL+IFDKIFAAYHEARSSIRS
Sbjct: 262 WLGHRFPISNAKTRVAILK-ARELEKDLQGSADSLPAEKRLSIFDKIFAAYHEARSSIRS 321

Query: 407 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKPE 466
           DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRH+EKNEKVTKPE
Sbjct: 322 DLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPE 381

Query: 467 ELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLAG 526
           ELVRLYDLLLQNIADLSDLVSSGRDR+QEEV FAEECSLKSIAFRGERCFYLAKSYSLAG
Sbjct: 382 ELVRLYDLLLQNIADLSDLVSSGRDRRQEEVAFAEECSLKSIAFRGERCFYLAKSYSLAG 441

Query: 527 KRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEEV 586
           KRAE YVLYCHARSLVEDAI+KF T NISDPK+IEELKTLIEECRANSCIEHATGIIEEV
Sbjct: 442 KRAEGYVLYCHARSLVEDAIQKFRTENISDPKIIEELKTLIEECRANSCIEHATGIIEEV 501

Query: 587 KAPENLSKKISNLSLTGAEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPIPR 646
           KAPENLSKKISN+SLTGAEKKSVKYLLQSLDNYESA+GDSN K+AP IE FPPAF+ IPR
Sbjct: 502 KAPENLSKKISNISLTGAEKKSVKYLLQSLDNYESAVGDSNIKTAPCIEAFPPAFRAIPR 561

Query: 647 NPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 681
           NPIVLDLAFN+IDFPSLENRMKKDRKGFISRLWG
Sbjct: 562 NPIVLDLAFNYIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Spg021888 vs. TAIR 10
Match: AT5G61970.1 (signal recognition particle-related / SRP-related )

HSP 1 Score: 434.9 bits (1117), Expect = 1.2e-121
Identity = 229/334 (68.56%), Postives = 272/334 (81.44%), Query Frame = 0


Query: 347 WLEEGLQAWNLRKKAKVIAGSRELEKDLQG-SADSLPAEKRLTIFDKIFAAYHEARSSIR 406
           WL       N + +  ++  ++ELEK+LQ  +A+SLPAEK+LTIFDK+F AYH+AR++IR
Sbjct: 269 WLGYRFPVSNPKSRVSILK-AQELEKELQSPTAESLPAEKKLTIFDKLFTAYHDARNTIR 328

Query: 407 SDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHEEKNEKVTKP 466
           SDLVSAGNAE+VKDDL+GLDKAV AVLGQRTIERNQLLVK+AKSKL R+ ++KN+KVT+P
Sbjct: 329 SDLVSAGNAESVKDDLNGLDKAVGAVLGQRTIERNQLLVKVAKSKLNRKRDDKNDKVTRP 388

Query: 467 EELVRLYDLLLQNIADLSDLVSSGRDRKQEEVTFAEECSLKSIAFRGERCFYLAKSYSLA 526
           EELVRLYDLLLQN+ADLSDL+SSGRDRK EE+ F EEC   S+AFR ERCFYLAKSYSLA
Sbjct: 389 EELVRLYDLLLQNVADLSDLISSGRDRKPEEIAFEEECQRTSLAFRAERCFYLAKSYSLA 448

Query: 527 GKRAEAYVLYCHARSLVEDAIKKFHTANISDPKMIEELKTLIEECRANSCIEHATGIIEE 586
           GKRAEA+ LY  ARSL EDA+ KF +    D   I+ELKTLI+ECRANSCIEHATGI+EE
Sbjct: 449 GKRAEAFALYSRARSLAEDALNKFQSIAKKDEGTIQELKTLIKECRANSCIEHATGIMEE 508

Query: 587 VKAPENLSKKISNLSLTG-AEKKSVKYLLQSLDNYESAIGDSNTKSAPRIEVFPPAFQPI 646
            +APENLS ++S +SL   A +   KYLL  LD YESA+GDSNTK+AP+IE FPPA Q I
Sbjct: 509 ERAPENLSNRMSTISLNNTAAQVEEKYLLDKLDVYESAVGDSNTKTAPKIERFPPALQSI 568

Query: 647 PRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRL 679
           PRNPIVLDLA+N IDFP +ENRMKK    F SR+
Sbjct: 569 PRNPIVLDLAYNCIDFPVIENRMKKKGGFFSSRI 601

[Close]

BLAST of Spg021888 vs. TAIR 10
Match: AT1G60720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 52.4 bits (124), Expect = 1.7e-06
Identity = 43/185 (23.24%), Postives = 78/185 (42.16%), Query Frame = 0


Query: 145 VGCGRRIRFWGDAWCDVQPLQLIFPDIYEISHMKLASVADCWDDRN-QTWNLGLRRGLFD 204
           +G GR   FW D+W  + PL  +  D Y    +++   A   +      W L L R    
Sbjct: 17  LGNGRIAHFWHDSWTSLGPLIKVMGD-YGSRSLRIPLNARVVEALGVNGWKLPLSRSAPA 76

Query: 205 REFSSWVALIGKLDSIQMGNGMDRISWKLEGSGLFSTKSLFQASVGKSPKINLSLVGKIW 264
           +     ++ I       + +  D +   +   G FS+   + A   ++P+++ +    +W
Sbjct: 77  QAIHDHISTITTPSPATIEDSFDWVVGGVVCQG-FSSARTWDAIRPRAPELDWAKA--VW 136

Query: 265 KHKSPKKVKIFLWSVAYRSLNTDDKVQWKLKNWA-LSPSGCRLCLKESEDIDHILLHCEF 324
              +  K    +W      L T    + +L +W  +    C LC  E+E  DH+L  CEF
Sbjct: 137 FKGAVPKHAFNMWISQLDRLPT----RQRLASWGHIQSFDCCLCTIETESRDHLLFSCEF 193

Query: 325 ASKMW 328
           A+++W
Sbjct: 197 AAQVW 193

[Close]

BLAST of Spg021888 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 9.3e-05
Identity = 22/76 (28.95%), Postives = 36/76 (47.37%), Query Frame = 0


Query: 252 PKINLSLVGKIWKHKSPKKVKIFLWSVAYRSLNTDDKVQWKLKNWALSPSGCRLCLKESE 311
           P     +  KIWK K+  K+K FLW +   +L T D ++   +    +   C  C +E E
Sbjct: 8   PPGKAEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLK---RRHIRNHPQCHRCCQEDE 67

Query: 312 DIDHILLHCEFASKMW 328
              H+   C +A ++W
Sbjct: 68  TSQHLFFDCFYAQQVW 80

[Close]

BLAST of Spg021888 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 43.9 bits (102), Expect = 6.0e-04
Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0


Query: 292 KLKNWALSPSG-CRLCLKESEDIDHILLHCEFASKMWNFIAGLLRLSFRFPKRVDDWLEE 351
           +L +W L  S  C LC +  E  DH++L C F+S +WN +   LRL    P +   W  E
Sbjct: 14  RLVSWGLQISPLCCLCSQSVETRDHLILTCGFSSSIWNMVQARLRLQ---PVQFRVW--E 73

Query: 352 GLQAW 356
            L +W
Sbjct: 74  SLLSW 73

The following BLAST results are available for this feature:

BLAST of Spg021888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450345.1	2.8e-160	88.92	PREDICTED: signal recognition particle subunit SRP68 isoform X1 [Cucumis melo]	[more]
KAA0056008.1	4.7e-160	93.63	signal recognition particle subunit SRP68 isoform X1 [Cucumis melo var. makuwa] ...	[more]
KAG7023831.1	6.2e-160	89.52	Signal recognition particle subunit SRP68 [Cucurbita argyrosperma subsp. argyros...	[more]
XP_023516487.1	6.2e-160	89.52	signal recognition particle subunit SRP68-like isoform X1 [Cucurbita pepo subsp....	[more]
XP_011660162.1	1.0e-159	88.32	signal recognition particle subunit SRP68 isoform X1 [Cucumis sativus] >KGN66541...	[more]

BLAST of Spg021888 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BMA6	1.8e-24	26.08	Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1...	[more]
Q00004	6.7e-24	24.72	Signal recognition particle subunit SRP68 OS=Canis lupus familiaris OX=9615 GN=S...	[more]
Q9UHB9	1.3e-22	24.38	Signal recognition particle subunit SRP68 OS=Homo sapiens OX=9606 GN=SRP68 PE=1 ...	[more]
Q9VSS2	6.0e-17	23.68	Signal recognition particle subunit SRP68 OS=Drosophila melanogaster OX=7227 GN=...	[more]
Q20822	2.4e-13	23.91	Probable signal recognition particle subunit SRP68 OS=Caenorhabditis elegans OX=...	[more]

BLAST of Spg021888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNF0	1.3e-160	88.92	Signal recognition particle subunit SRP68 OS=Cucumis melo OX=3656 GN=LOC10349198...	[more]
A0A5A7ULQ1	2.3e-160	93.63	Signal recognition particle subunit SRP68 isoform X1 OS=Cucumis melo var. makuwa...	[more]
A0A0A0M2X1	5.1e-160	88.32	Signal recognition particle subunit SRP68 OS=Cucumis sativus OX=3659 GN=Csa_1G62...	[more]
A0A6J1H9B0	6.6e-160	89.22	Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JC09	8.7e-160	89.22	Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Spg021888 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61970.1	1.2e-121	68.56	signal recognition particle-related / SRP-related	[more]
AT1G60720.1	1.7e-06	23.24	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G25270.1	9.3e-05	28.95	Ribonuclease H-like superfamily protein	[more]
AT4G10613.1	6.0e-04	36.92	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 238..327 e-value: 1.0E-16 score: 61.4 coord: 39..103 e-value: 2.6E-7 score: 31.3
IPR026258	Signal recognition particle subunit SRP68	PFAM	PF16969	SRP68	coord: 363..658 e-value: 2.2E-62 score: 211.8
IPR026258	Signal recognition particle subunit SRP68	PANTHER	PTHR12860	SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN	coord: 363..680

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021888.1	Spg021888.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0030942	endoplasmic reticulum signal peptide binding
molecular_function	GO:0005047	signal recognition particle binding