Spg021681 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021681
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationscaffold2: 17341987 .. 17346876 (-)
RNA-Seq ExpressionSpg021681
SyntenySpg021681
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATGAGGAACTCCTGGATCATCTCACTGTAGTCTCTGTAGCTCCTGATCTGCACCCCAAAGGCCTCAAAGAACAAACTCCAAATAGATCTTGCATAGGTACAATGCCACAAGATGTGGTCCAGGTCTTCCCTCACCCTTTGACAAAGGATACAACAAAAAGGTCCTACCAATGAAGGCATCTTCCTCGTAAGCTTGTCAATCGTATTAACTTTACCATGGATAGCCAGATAAAGAATCTAATCTTCTTAGGAACTTTCACCTTCCAAAGAATAGAAAAGATGGACTCACTACGAGGGGGAGGCTAAGCAACCACTGAAAAAAGGAGCGACAAGAAAAACCTTTAGAAGGGCTAAGACTCCAACTACGAATGCCCCTCCTCCCTTCCCTAAACTGAAACTCCCCAATCAATGACAAGAGAGTTGCAATCTCATCACCTCCCTATCGGTTAAAGAACGATGGAAACCCAAAGAATGTGAGGTTTGATCCAATGTCAAATTCTATGTTTCATTATGAGCCTCAGTTTCTAAGGCTTTTTTTATAATTATCCACTAGATATCATTTTGTATGATTGGAATTCCTCTCTGTGGTAGGGATTCTTTTGTTAGTATTTTTAAATGTCCTTGTATTCTTTCATTTAGACAGAGATTCTTTTGTTAGTATTTTTAAATGTCCTTGTATTCTTTCATTTTTTCTCAATAAAAGTTTGGTTCTTTATAACAAAAAACACGACAACCCCAATATATCCATCATGTTATATTAAAGCAAGATCTTGTTGATGGCTATATATTTATTTATTTATTTTTGGATAGATAGTAGACGTTTCAATTACGACCTTGTCTGAACGGGATCTGTTCTATAGGTGTCCTTGAGTTCTAAAGATAGTAGAAGTTTTAATAAAGACAGAGTTGGCAGGCCTTTTTATACGGTTTTGATAGATTTTATGATGTTAATTTTGTGATCTGATGTTCCATTGTAACTTTTCTAATATCAATAAACAGTTGTTGTTTCTTTCTTTCTTCCTCCTTCTTTCATTTTTTTCAAATGAAGTTTTTATTAAGAAGTGTTCTTATATATATATATATAAGAGTTCCAATTAATGGCTAAAAGTAGAATTGACATTTGTTTTCATTGAAGCATTGCAATTTATCTGGGTTCTGGTTAGGCATATTTGTTTGTTTTAGGTCTTTTGTTTGCAATTAATTATACAAGGCTTATAACTTTTCATCTTAAAAATGAAATTTCCTTGATATGAAAATAGCTCAAAATTGTTGCACATTCTATGTTATTGCTATTATCTTAAATTTTCTATATCTATCAGTTCTAAGAGCCACACTCACTACTTATGCAGAGGAAATATTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTTGCCCTGAAGCAAGGTATTATTAAGTTTATAGGCAAAATGCATGTTTTGCTTTTCCATACAAATATTAGGATTTAGGAATGTACAAGAATTGCCTCATGGATTGTTTTCTACATCATGTTATTATCGTTTTTATTCCTCTCCAATCAAGTGGTCAAGTGGTCCAATTTAACATTGACCTGCTCAAATTATTATTTTTTTCCTCATCTTGGAACAATTGCTTTTGTTTGACTTTGACTTTAAACCATTTGGTTGTCAAGGTACTTGTAAGGTTCGGACCTGTACCCTCAAACTCCATTTACTTTTTTCACTTGCTCCATTGACCATTAGGACAACCGCTAATGATTTTGAAAATTTGCATTCAAACTACCTATTTCTCTCTCAGAATCACAGGGCCACATTTTCATATCTTGCGATTATGCATCAATCCTTTGCGGGGACTTATTGCCCTCAATTAGCTAGTCTAGGTGCTGCCCTCAGATGCAACGTTCTCTCTCACACACTTTACCAGGTCACCCTTTTAAATTAAAAAAAAAATGAGAAAAAGCATTTATGGCTTCACCTCATGTGGGCATTCTTTTGGCTTACTTGGCAAGAAAAAAATCACAAAATTTATAGAGATAAGGTGCTTACCTATGGCCGTTTATTTAAGCTTAGTTTTTTTTGGCTATTTCTTGGTGCAAGTATTCTCCCCTTTTCCATTTCTATAGCTTTTCTTCTCTATTATCCAACCGGACTGCTTTTTTGTAACTCCTTTGGAATGGGCATTTACCACCTTCCCTTAGACAGATTGTGCCTATTTCTCAAGGCAAGACCTTTGAATCATTGCCACACCCCTGCCAAAAAAAAGTAAAGGAACTCTCGTCTATTGTCAAGACCAACAAAGGAAAGGAAGAGCTTGAGAACTGACATTCCAATATCAACTATGACAAAGCACCAACAAAGGCATTATTGGAGGGCACAATCCTCCTCCAATGAGGTTTCTTTCATGGAATGTTAGGGGATTGGGTTCTCGTTGGAAAAGGGCTCTGATCAAAACCACCATACAGAACTTCAAACTTTTTCCTACTCCAAGAAACCAAGAAGAGTAAGGTTGACAGAAGACAAATTCGAATTGGAGCTCCTCCCATGTTCTTGGGTCTCCCTTGATTCTAATGGAGCTTGCAGGGACATTCTCATCTTATGTTCCTCTCTATTCAAGCTTTTCTCTCTAACAGTTTTTCCATATGGTTTCCGTTTGATCGACTACTGTATATGACCCTTCTAGAAAAGAACAAGTAGAACGCTTTTTGGCAAGAGCTTTATGAGCTGGTAGAGTTTGGGTCTCGGGAGGTGATTTTTTATGTTACAAGATGGTCGTAGGAGAAATCACATGGAAGAACATCCGTAAGAAGCATGGGATTTTTTAATAAATTGATTGCTGACTATCATCTCATGGACATTCCATTGTAGAATGGAAGGTTTACATGGTTGAGCTTTTGTGAGAACCTAACCACGACTCTTCTAGACAGGTTTTTGATAGCCAATGATTGCATTTTAAAGTTTGGAACCGCCTGCCTCACCCAATTGGGAAGAGACATTTTTTTTTTGGATGAATAATTGAACTTTCATTAATTAAGAAAAAAAAGAAGAAAGAATACAAGGGCATGCTAAAATAAAGCCCACAAGAGGGAGCCAAACTACAAAAAGAGGCTCCAATCTAGTAAATAAAGCCTATAGTGTAATTTCAGAATGGTCTCATCATTGATGTCCAAAGAGAAATGTAGAATATAACAAAGGATCAAACATCACTAAAAGACGTCCATTGACCCCTAAATATTCTATTATTCCTCCCACCCCAAAGGCCCCACAAAATAGCATGCACCCCATCTTGCCACAAAAACAACCCTTAAGAAGAGGTGAATGGAGAAGTTGCTCCTCAATTGTCTCTCTACAACTGTGAGAGTTGACATAAAAAGTCGAATGCCTTAAAGAAACAACTCCAGATGACACCTGCAAAATCACATCTCCAGAGAATATGTTCAAGATCCTCCACTACCGTCTTGCAATGAATACAACAAAGTGGTCCAACCAAGGTGGACCACCTCTTGAGACCCAATCCAAGGTCTTAGCTCTTTCGTGCATAACCTACACACACACAAAGAACTTAACCTTCTTCGGAATTTCACCTTCCACATAGAGGAAAAAATAGAACCACAACAAGCATGTTTGGGCTTCCTCTTCATAGAAACGTTTCTAGGAGCTACGTCAGGCCTAAACAGAACCATTGATAGTCGCATTAAACACTTTCTTGGAAATGGAAAGGATATATCTTTTTGGCATGATCTTTGGGTGGAAATTGGCACATTGGCAGAATCTTTTCCCAAAGATATATGGGCTCTAAAAGTGACTAGACAAATCCATAGCAGATGTTTGTGTTCATGAAACAAAACCATGGATTTGGAATTTAGAAGGTACCTAACAAATGATGAAATCACTAAATTGGCCACCCTATTGCTCATATCATCCATGGTAAGCCTCAAAGAGATGCTAGATTCATGCATGGAAATGGCCCATAGATCCTACTAGAAAATTCACCGTTAGATCATTGATGATGGATTTAGTTAGTGTATAATGTGTAGGAAAATTCAAAATCCCAATGCCATCTTTTTGCCCACGACTTGTTTGTATGAATCTATTGGAATGAGATGGTCAATGCATTTGGCTGGTCCACAGGTATGCTTGACAACAACATGGACTTTCTAGCTCTAATTCTTGTCGAGCATCCATTTAAAGGAACAAAAGCAACGGTTTGGTTGGCCACAGATAGAGCTTTTCTTTGGAATCTCTTTGGAGAAAGGAACAATGGGGGTTTTAACATTTAGTTTTCCTCTTTTGATAGAGAGATTATTTTGGAACTTTTTATGGAAGGAGGGAGCATCTAGAACAGGCATCCATCTTGTGAATTGGAACAAAATTCTTCTCTCTTTGGACAAGGGAAGTCTCAATCTATGTTCCTTGAAAGATGAGAAAAGAGCACTCTTTGTAAAATGGATATGGTGTTACAACAATGAAAGCGATGCTATATGGAGGAAACTTATCAAAGGTAAATATGGGTCAACATCCGATTGTGTATGGACAAATTACAACCAAGGGGCCTTGGAAGTCCATCATCAAGCATCAAGTGGTTTTTTTTTTTTTTTAAATATTTTAACCTTATTTTTATCGAATTTACCATCAAGTGGGAGATGATGCAACGACCCCTGTTTGGATCGCCCTTGGGTTATTTCCACTGGCTTCCCAATTCCCCTTGTTATACAGGTTATCTAAACATAAACCGACCACTATAAAGGATGTACGGAATTTTGAATTACTGGGACCTATCATTTGGCAGGAACTTGAAGGATGAAGAGGCAATTGAATGGGAAGAACCTGTATTTGCCCTCTCTCCGGTTTCTCTCATAAAGGGAACATTCTTGGATATGGACAACTAG

mRNA sequence

ATGGCGGATGAGGAACTCCTGGATCATCTCACTGTAGTCTCTGTAGCTCCTGATCTGCACCCCAAAGGCCTCAAAGAACAAACTCCAAATAGATCTTGCATAGTTCTAAGAGCCACACTCACTACTTATGCAGAGGAAATATTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTTGCCCTGAAGCAAGGTACTTGTAAGGTTCGGACCTGTACCCTCAAACTCCATTTACTTTTTTCACTTGCTCCATTGACCATTAGGACAACCGCTAATGATTTTGAAAATTTGCATTCAAACTACCTATTTCTCTCTCAGAATCACAGGGCCACATTTTCATATCTTGCGATTATGCATCAATCCTTTGCGGGGACTTATTGCCCTCAATTAGCTAGTCTAGGTGCTGCCCTCAGATGCAACGTTCTCTCTCACACACTTTACCAGAATGGAAGGTTTACATGGTTGAGCTTTTGTGAGAACCTAACCACGACTCTTCTAGACAGGAAAATTCAAAATCCCAATGCCATCTTTTTGCCCACGACTTGTTTGTATGAATCTATTGGAATGAGATGGTCAATGCATTTGGCTGGTCCACAGGAGGGAGCATCTAGAACAGGCATCCATCTTGTGAATTGGAACAAAATTCTTCTCTCTTTGGACAAGGGAAGTCTCAATCTATGTTCCTTGAAAGATGAGAAAAGAGCACTCTTTGTAAAATGGATATGGTGTTACAACAATGAAAGCGATGCTATATGGAGGAAACTTATCAAAGTGGGAGATGATGCAACGACCCCTGTTTGGATCGCCCTTGGGTTATTTCCACTGGCTTCCCAATTCCCCTTGTTATACAGGAACTTGAAGGATGAAGAGGCAATTGAATGGGAAGAACCTGTATTTGCCCTCTCTCCGGTTTCTCTCATAAAGGGAACATTCTTGGATATGGACAACTAG

Coding sequence (CDS)

ATGGCGGATGAGGAACTCCTGGATCATCTCACTGTAGTCTCTGTAGCTCCTGATCTGCACCCCAAAGGCCTCAAAGAACAAACTCCAAATAGATCTTGCATAGTTCTAAGAGCCACACTCACTACTTATGCAGAGGAAATATTATTGGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTTGCCCTGAAGCAAGGTACTTGTAAGGTTCGGACCTGTACCCTCAAACTCCATTTACTTTTTTCACTTGCTCCATTGACCATTAGGACAACCGCTAATGATTTTGAAAATTTGCATTCAAACTACCTATTTCTCTCTCAGAATCACAGGGCCACATTTTCATATCTTGCGATTATGCATCAATCCTTTGCGGGGACTTATTGCCCTCAATTAGCTAGTCTAGGTGCTGCCCTCAGATGCAACGTTCTCTCTCACACACTTTACCAGAATGGAAGGTTTACATGGTTGAGCTTTTGTGAGAACCTAACCACGACTCTTCTAGACAGGAAAATTCAAAATCCCAATGCCATCTTTTTGCCCACGACTTGTTTGTATGAATCTATTGGAATGAGATGGTCAATGCATTTGGCTGGTCCACAGGAGGGAGCATCTAGAACAGGCATCCATCTTGTGAATTGGAACAAAATTCTTCTCTCTTTGGACAAGGGAAGTCTCAATCTATGTTCCTTGAAAGATGAGAAAAGAGCACTCTTTGTAAAATGGATATGGTGTTACAACAATGAAAGCGATGCTATATGGAGGAAACTTATCAAAGTGGGAGATGATGCAACGACCCCTGTTTGGATCGCCCTTGGGTTATTTCCACTGGCTTCCCAATTCCCCTTGTTATACAGGAACTTGAAGGATGAAGAGGCAATTGAATGGGAAGAACCTGTATTTGCCCTCTCTCCGGTTTCTCTCATAAAGGGAACATTCTTGGATATGGACAACTAG

Protein sequence

MADEELLDHLTVVSVAPDLHPKGLKEQTPNRSCIVLRATLTTYAEEILLENVELILEAFDYLQLPFALKQGTCKVRTCTLKLHLLFSLAPLTIRTTANDFENLHSNYLFLSQNHRATFSYLAIMHQSFAGTYCPQLASLGAALRCNVLSHTLYQNGRFTWLSFCENLTTTLLDRKIQNPNAIFLPTTCLYESIGMRWSMHLAGPQEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKRALFVKWIWCYNNESDAIWRKLIKVGDDATTPVWIALGLFPLASQFPLLYRNLKDEEAIEWEEPVFALSPVSLIKGTFLDMDN
Homology
[Close]
BLAST of Spg021681 vs. NCBI nr
Match: KAA0047098.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK05060.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-06
Identity = 35/120 (29.17%), Postives = 60/120 (50.00%), Query Frame = 0 

Query: 181 AIFLPTTCLYESIGMRWSMHLAGPQEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKR 240
           ++F   +   ++I   W   L     G+   G +L+NW K+  S ++G L +  L    +
Sbjct: 287 SVFQAPSLTCKNIEKFWRKFLWKGNNGSE--GSYLINWTKVFKSKEEGGLGISRLHVTNK 346

Query: 241 ALFVKWIWCYNNESDAIWRKLIKVGDDATTPVWIALGLFPLASQFPLLYRNLKDEEAIEW 300
           AL  KW+WCY +E +A+WR+LI+       P  I   +    S+ P  +R++ D   I+W
Sbjct: 347 ALLSKWLWCYLSEPNALWRRLIQCKYKGNYPGDIPSNISSSTSKAP--WRSIIDN--IDW 400

[Close]
BLAST of Spg021681 vs. NCBI nr
Match: KAE8714051.1 (Myosin-15 [Hibiscus syriacus])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-06
Identity = 25/65 (38.46%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 206  EGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKRALFVKWIWCYNNESDAIWRKLIKVG 265
            EG+S++ IH VNW ++ LS+++G L +  L    R L  KW+W + NE D++W+ +I   
Sbjct: 1564 EGSSKSRIHWVNWKRVCLSIEEGGLGVLDLNFANRVLLGKWVWKFANEKDSLWKNMICSI 1623

Query: 266  DDATT 271
             +A+T
Sbjct: 1624 HNAST 1628

[Close]
BLAST of Spg021681 vs. NCBI nr
Match: TYK08190.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-06
Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 0 

Query: 183  FLPTTCLYESIGMRWSMHLAGPQEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKRAL 242
            F     +Y+ I   W   L G  E   +   HL+NWN      + G L +  LKD  +AL
Sbjct: 1419 FKAPVSVYKEIEKHWRDFLWGGSE--DKQNAHLINWNICTSPKELGGLGISKLKDTNQAL 1478

Query: 243  FVKWIWCYNNESDAIWRKLI 263
              KW+W Y+NES+++W+K I
Sbjct: 1479 LCKWLWRYHNESNSLWKKCI 1496

[Close]
BLAST of Spg021681 vs. NCBI nr
Match: KAA0057507.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-06
Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 0 

Query: 183  FLPTTCLYESIGMRWSMHLAGPQEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKRAL 242
            F     +Y+ I   W   L G  E   +   HL+NWN      + G L +  LKD  +AL
Sbjct: 1419 FKAPVSVYKEIEKHWRDFLWGGSE--DKQNAHLINWNICTSPKELGGLGISKLKDTNQAL 1478

Query: 243  FVKWIWCYNNESDAIWRKLI 263
              KW+W Y+NES+++W+K I
Sbjct: 1479 LCKWLWRYHNESNSLWKKCI 1496

[Close]
BLAST of Spg021681 vs. NCBI nr
Match: KAE8691187.1 (hypothetical protein F3Y22_tig00110890pilonHSYRG00015 [Hibiscus syriacus])

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-06
Identity = 25/65 (38.46%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 206  EGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKRALFVKWIWCYNNESDAIWRKLIKVG 265
            EG+S++ IH VNW ++ LS+++G L +  L    R L  KW+W + NE D++W+ +I   
Sbjct: 1717 EGSSKSRIHWVNWKRVCLSVEEGGLGVLDLNFANRVLLGKWVWKFANEKDSLWKNMICSI 1776

Query: 266  DDATT 271
             +A+T
Sbjct: 1777 HNAST 1781

[Close]
BLAST of Spg021681 vs. ExPASy TrEMBL
Match: A0A7N2LZJ6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-07
Identity = 38/111 (34.23%), Postives = 51/111 (45.95%), Query Frame = 0 

Query: 213 IHLVNWNKILLSLDKGSLNLCSLKDEKRALFVKWIWCYNNESDAIWRKLIKVGDDATTPV 272
           IHLVNW+K+   +  G L +  LK    AL  KW+W Y  E+DA WR++I   D      
Sbjct: 151 IHLVNWSKVCRPVKNGGLGIWCLKRFNNALLAKWLWRYGWENDAFWRRVIGAKDR----- 210

Query: 273 WIALGLFPLASQFPLLYRNLKDEEA-IEWEEPVFALSPVSLIKGTFLDMDN 323
                  PL  +FP LY   +  EA +    P  A    +   G  L +DN
Sbjct: 211 -------PLKEEFPDLYNISRTREASVSEVPPRVAFFSWTAALGKILTIDN 249

[Close]
BLAST of Spg021681 vs. ExPASy TrEMBL
Match: A0A5D3C104 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00250 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.2e-07
Identity = 35/120 (29.17%), Postives = 60/120 (50.00%), Query Frame = 0 

Query: 181 AIFLPTTCLYESIGMRWSMHLAGPQEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKR 240
           ++F   +   ++I   W   L     G+   G +L+NW K+  S ++G L +  L    +
Sbjct: 287 SVFQAPSLTCKNIEKFWRKFLWKGNNGSE--GSYLINWTKVFKSKEEGGLGISRLHVTNK 346

Query: 241 ALFVKWIWCYNNESDAIWRKLIKVGDDATTPVWIALGLFPLASQFPLLYRNLKDEEAIEW 300
           AL  KW+WCY +E +A+WR+LI+       P  I   +    S+ P  +R++ D   I+W
Sbjct: 347 ALLSKWLWCYLSEPNALWRRLIQCKYKGNYPGDIPSNISSSTSKAP--WRSIIDN--IDW 400

[Close]
BLAST of Spg021681 vs. ExPASy TrEMBL
Match: A0A6A3BDL8 (Myosin-15 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110201pilonHSYRG00147 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.1e-07
Identity = 25/65 (38.46%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 206  EGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKRALFVKWIWCYNNESDAIWRKLIKVG 265
            EG+S++ IH VNW ++ LS+++G L +  L    R L  KW+W + NE D++W+ +I   
Sbjct: 1564 EGSSKSRIHWVNWKRVCLSIEEGGLGVLDLNFANRVLLGKWVWKFANEKDSLWKNMICSI 1623

Query: 266  DDATT 271
             +A+T
Sbjct: 1624 HNAST 1628

[Close]
BLAST of Spg021681 vs. ExPASy TrEMBL
Match: A0A5A7US62 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003960 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.1e-07
Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 0 

Query: 183  FLPTTCLYESIGMRWSMHLAGPQEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKRAL 242
            F     +Y+ I   W   L G  E   +   HL+NWN      + G L +  LKD  +AL
Sbjct: 1419 FKAPVSVYKEIEKHWRDFLWGGSE--DKQNAHLINWNICTSPKELGGLGISKLKDTNQAL 1478

Query: 243  FVKWIWCYNNESDAIWRKLI 263
              KW+W Y+NES+++W+K I
Sbjct: 1479 LCKWLWRYHNESNSLWKKCI 1496

[Close]
BLAST of Spg021681 vs. ExPASy TrEMBL
Match: A0A5D3CA17 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00050 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.1e-07
Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 0 

Query: 183  FLPTTCLYESIGMRWSMHLAGPQEGASRTGIHLVNWNKILLSLDKGSLNLCSLKDEKRAL 242
            F     +Y+ I   W   L G  E   +   HL+NWN      + G L +  LKD  +AL
Sbjct: 1419 FKAPVSVYKEIEKHWRDFLWGGSE--DKQNAHLINWNICTSPKELGGLGISKLKDTNQAL 1478

Query: 243  FVKWIWCYNNESDAIWRKLI 263
              KW+W Y+NES+++W+K I
Sbjct: 1479 LCKWLWRYHNESNSLWKKCI 1496

[Close]
BLAST of Spg021681 vs. TAIR 10
Match: AT5G24740.1 (Protein of unknown function (DUF1162) )

HSP 1 Score: 43.9 bits (102), Expect = 2.8e-04
Identity = 57/182 (31.32%), Postives = 85/182 (46.70%), Query Frame = 0 

Query: 46  EILLENVELILEAFDYLQLPFALKQ---GTCKVRTCTLKLHLLFSLAPLTIRTTANDFEN 105
           E+LLENVEL  EAF+YLQLP ALKQ   G   ++    KLH      P+TI         
Sbjct: 37  EVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIPWKKLH----RDPVTIM-------- 96

Query: 106 LHSNYLFLSQNHRATFSYLAIMHQSFAGTYCPQLASLGAALRCNVLSHTLYQN-GRFTWL 165
           +   ++  SQ +   +S   +  + FAG    +LAS   A     LS  ++ N G  +++
Sbjct: 97  IEDVFICASQRNDQEWSSDVVEKREFAGKKA-KLASAELA----KLSRRVFDNPGGNSYM 156

Query: 166 SFCENLTTTLLDR-KIQNPNAIFLPTTCLYES----IGMRWS------MHLAGPQEGASR 213
           S+   +T  +LD  ++   N   L +    ES    +G+R+S       +  GP  G  R
Sbjct: 157 SY---ITAKILDSVQVSIKNFHILYSDAQPESGQVVLGLRFSSLTVTKQNSVGPSVGRVR 198

[Close]
BLAST of Spg021681 vs. TAIR 10
Match: AT5G24740.2 (Protein of unknown function (DUF1162) )

HSP 1 Score: 43.9 bits (102), Expect = 2.8e-04
Identity = 57/182 (31.32%), Postives = 85/182 (46.70%), Query Frame = 0 

Query: 46  EILLENVELILEAFDYLQLPFALKQ---GTCKVRTCTLKLHLLFSLAPLTIRTTANDFEN 105
           E+LLENVEL  EAF+YLQLP ALKQ   G   ++    KLH      P+TI         
Sbjct: 37  EVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIPWKKLH----RDPVTIM-------- 96

Query: 106 LHSNYLFLSQNHRATFSYLAIMHQSFAGTYCPQLASLGAALRCNVLSHTLYQN-GRFTWL 165
           +   ++  SQ +   +S   +  + FAG    +LAS   A     LS  ++ N G  +++
Sbjct: 97  IEDVFICASQRNDQEWSSDVVEKREFAGKKA-KLASAELA----KLSRRVFDNPGGNSYM 156

Query: 166 SFCENLTTTLLDR-KIQNPNAIFLPTTCLYES----IGMRWS------MHLAGPQEGASR 213
           S+   +T  +LD  ++   N   L +    ES    +G+R+S       +  GP  G  R
Sbjct: 157 SY---ITAKILDSVQVSIKNFHILYSDAQPESGQVVLGLRFSSLTVTKQNSVGPSVGRVR 198

The following BLAST results are available for this feature:
BLAST of Spg021681 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047098.11.3e-0629.17LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK050... [more]
KAE8714051.11.7e-0638.46Myosin-15 [Hibiscus syriacus][more]
TYK08190.11.7e-0636.25LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
KAA0057507.11.7e-0636.25LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
KAE8691187.12.2e-0638.46hypothetical protein F3Y22_tig00110890pilonHSYRG00015 [Hibiscus syriacus][more]
BLAST of Spg021681 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg021681 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7N2LZJ62.8e-0734.23Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A5D3C1046.2e-0729.17LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A6A3BDL88.1e-0738.46Myosin-15 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110201pilonHSYRG00147 PE=... [more]
A0A5A7US628.1e-0736.25LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3CA178.1e-0736.25LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
BLAST of Spg021681 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24740.12.8e-0431.32Protein of unknown function (DUF1162) [more]
AT5G24740.22.8e-0431.32Protein of unknown function (DUF1162) [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021681.1Spg021681.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007010 cytoskeleton organization
cellular_component GO:0110165 cellular anatomical entity
molecular_function GO:0003824 catalytic activity
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0005515 protein binding