Spg021635 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021635
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold2: 17587810 .. 17592987 (-)
RNA-Seq ExpressionSpg021635
SyntenySpg021635
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCCGAGTACTAGCGAGTCCACTGACGATATGAAGAAAAGAATGGCAGAGGGTATGGCAGGAGGAACACTAAAGCGGGCCCGAACTGAAGAGGATGACATATCCAATTGTAATGAACCAACGGTGGAGGCTGTGGCACAGCCCCGCCGAGAGCCATGAAAACGTTGTGTTGGAATGTCTGTGGTCTGGGGAATCCTCGTACATTTCGAGCTGTTCATGATGGTATACGTCACTTTGATCCTTATTTACTTTTTCTATTGGAAACGAAATGTAGTTCGTGTAAACCCGAGACTTTCCTTGAATCATTTCCTCTTGTATTGTGGAAGTTGAATTAAAAGTTGTTGTTATTCATTGTTGAATGAAAATGGCAAGCTTTTAGTTCAAGTTGTTTTTTTTATAACTTTGGAGTTTATTTAAAGAAAAGAAATAGAAAAAAGAAGAAAAGAAAAGGAAAGAAAAGAAATCAGGGAAAATGGAACAAAAGTGAAAAAGGAAATTAAAAAAAAAAAAGAAAGAAGAAAAAGAAGAAAATGGGAAAAGCACTTTCGGTGCTTCAAAACCCACCACCGACTAGCATTCTTATTAGCCCATTTTCAGCCCAATTTCTCATCATTTTCCATCCAAAGTTTCAAAGCACTTGAGGGAGAGAGTGAAGGAAGAATAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATTGTAGAATCTGTGTTCAACCTGTCAACCCCTGGTTTTTTTATTCGGTTTGAGCTACATAGAAGGAATTAAGAGGTGAGGTTTGATTTTATTGAAAGTTAATCCATTTTCTAACCAATTTCATGAAGGAAGCTTGAGCTAAATCTGATGAGAAGTTTATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGTGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTATTTTGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTTGTATGGTTGGAAAGCTTATTCAATTTCCTACAACTTTCATGAAGAATTCATGAGCCGAAAATGACTTGAAGTAGGTTTATTTTCAGGAGAAAGATAAAGGGCAGCAGAGAACCTCGAATCTGTGTTGTCTATGTTCGGGGCATTTCTGGACAAATTAGTTGGGAATCCCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTATAGTACATTAATTTTGGTTAAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGAAAAGTAGAATGTAGAGTGAGATTTCTTATTCAATTGTTTAGAAATTCATGAGCATGGAAAGACAAAACTAATTATGGTTCTGATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGGGTCTATAAACCAGGGAACTAGCTAAGACGGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTTTAGATGTTTTACATGCTTTTCTATAAATGATACATGGTTTTTATGAATGGTTTCAAGCTTAAGTTATGAGCTTAGATTTTCTAATGAGATTTATAAATGAGCACGTGATTATTGAGTTTCAGAAAAATAGTTGAAACGACATCCTTTTAAGTCAAGTATGCGTTAGCAAGAATTATTTAAAGATTTTCGGGTTTTCCACGAGCAAGTTGAATAAGCTCGAGTTTTACGAGAGATAACGATAAGCAGGCATGTTCTAATGTTTTCATAGGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACAGTGTGCACACAGGTTATATTTCGTTGTTGACGTTGAGTGTACTCCGTGACAATGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCAGGCCCCACTACATCGTAGGACTAGTAAATGTTGGTTGTACTGGGTGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAATGTTTGATGTACTTGATATGTTTTGCTAGATTTTTTAATGACGAGCCTGCGATGTTTTTAAGAAAGCTTTTATCGTTGCACGTTTATGTTTAACGCCTTGGTTGAGCATCTTTATACGTTTAAAGTTTTATCACGTGTTCTGATTTCCGAATGTACAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCAGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATCGAGTCCGTCTATATTGTAAATGTTTTGTAAGGATTGGACAATTTAGTCCTAGAGGTCGTGGTTGTATAAACCCCATTTGTATATGTTTTTGGTTGTGAAATCTATATCAGGTTATTTTCCAAGTCGAGTTATGTCAGGGCTACACCTCGTGTATATTAGAAGGTTTTCAGGGATTCCACTGTGTTGTGTTTCATGTAGAATATTTTATATCTAAGATTAGTATGTTTATTAGGTTCAACGTTTCAGGACGGTCAACGGGTATTGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGACGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCGTGGGAAATGAGACATGGTAGTTAGTGCTAAGAAAAATCCAGGAAGTAAATAGTTAGACGTTGGGTCAGTTCAGATAGGACTAGCGGAGTATGGTCCGAGTATTGTTGAGAGTGAGTCCAGTCAGGACTAGAATGTAGGTATAAGTTTAGTATCATGCATCTGAGTGAAGTATCTATAGCATGTCTGATGTGTTGATATGTTATAGGAGTCATGCCACCACGTACCGGCAGACGACGCAGGTAGAATCAGGACGGGATGCAGGATCCTACCCAAAGTCGATCTGAAGGGGGATCCAGTACCTCGAGAGGTCAGAATGAGGCAGGGAGTGAGCAGTTTGCTAGATATGCACAGGAGATCGGTAGGCCAGAGAAAGAAGGGCCTAGTGATCCGGAAAAGATGTATGGGATTGAACGGTTGAAGAAGTTAGGAGCCACAGTGTTTGAGGGTTCCACAGATCCAACTGACGTTGAGGTCTGGTTGAATATGTTGGAGAAATGCTTCGACGTGATGAGTTGTCCCGAGGAGCGAAAAGTCAAATTAGCCACATTCCTACTACAGAAGGAGGCGGAGGGATGGTGGAAATCCATTTTAGCCAGGCGCAGTGATGCACGTACGTTTGACTGGCAGACATTCAGAGGCATATTCGAGGAAAAGTACTATCCCACCACATATTGTGAGGCTGAGAGAGATGAGTTTCTGGAGCTGAAACAAGGGTCATTTTCAGTGGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGATATGCCGATGTGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGGGGGTTGCGTTTTGAGATACGTACCCCGGTTACCGCTATTGTCAAGGGGACAGATTTTTCCCAGCTAGTAGTGACTGCTTTACGTGTGGAGCCAAGTATAATAGAGGAAAAGTCAACAGTGGAGCCTAGTCGTGGAGCTTCAACAGCTAGTGGTTTCCGAGGTTGTGAGCAGCGGAGGTTCACACCTGGAGTGAATGTTTCAGGTCGTCAAGACTTCAAGCACCGATCTGGTGGCCAGTTGTCGAGGTAGATGAGCTCGGGTAGTGCTTATCAAAGGCAGAGTCAGAGAGCCCCCAGTCAGTCTGCGAGTTCAGTAGCAAGACCGCGGACGGGTCAGGAGTCCGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGCAAGAATCATCGGGGTCAATGTCTTGTTGGCGCCGGTGTGTGTTACCAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGCCCACAGCTGAGGGCAGCAGTTCAGGGGGAGCAGGGAGTTGAGTCCCACACAATTGAGCAGCTATTGGGACGATTATCCGATTATCGCAAGCGTACGGGTCGTCACAAGTAATATAGTGATTTTGAGTATAGAGTATCGTCTCCACAGGGATTGGATTTATTCAATTAATTACCATAAATAATCTTGCTGAGCTTTATTTAGAGAACAAAATCTAATGCCAACAAGAATACAAAAAGCTAATCTAGAAAGCAAAAGATAAATGGAGACACAATTTGGTGGGGTAATTCTAGAGTGGTTGATTTAATCAATTGGACCTTTAATGCTTAATCAATTAACTAATATGGATTAACTAATCATTTGATTCATAAGTCTAGAAGCCTAATGACAAGGACTCTCCTGTCGGTCTCTTCCTATCTCATACCTTTCAATAAAGAATCTCCTTTCGGTCTCTTCTTTATTTACTTAGCATGGCATTACGACCCTTCAATACAACCTCTAAGGTTATTTATTCTATCCCGTGTCACTCGGGTAAATAAACGTTAGTCATGCATTCAGTTCTAGTCAAAGCTTCTCTCCGTCGAGTTTCCACTTAGTAACGATTCATTTAATCAGTGATCAGTTGATTAAAAGCATTACAGACAAAATGCACAAATGAACAATAATGATAACTAAACCAAATCAATTCATTAATCAAGCAGAGGTTCAACATATTAAATCAAACTCATAGAATTTAGGAATTAACTACTCATAATCACTAAAATCCAATAATTCCTAATCACAACAATTCTAGAAACTAAAACATAAAGGAAAAGGGAAGAGAAATGCTCATAAAAGTGTCGATCTCCTCGATCCCGCGCCGACCTCCATCGATCCCGAGTTCCAAAGATCTTCAACAAAGCTCAAAAACTCTCCCAAAAATCCCCAATTTTAGTGTGGATTCTAGAATGGGGTGAAAACCCACAAATTGGCACACGAAACTTGGATGCAAATGGCCCCTTTTATAGGCTCCCAGCAGGCGTAGCGTCGAGACGCTACGTCACAGCGTCGCGACGCTCTGACGTCATCTTTTCTTGGGCTCCAAGTCGTCGCAGCGTTGCGACGCTACATGGACAGCGTCGCGACGCTACCCCATTTCTGGATCTTTCCGCATAGCTGCCTCGCGTCGAGACGCTTCGGCCTAG

mRNA sequence

ATGACTGAGATATTGAGCCCGAGGCTATATGGTACAGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCAGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACGTTTCAGGACGGTCAACGGGTATTGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGACGGTGAGTCATGCCACCACGTACCGGCAGACGACGCAGGTAGAATCAGGACGGGATGCAGGATCCTACCCAAAGTCGATCTGAAGGGGGATCCAGTACCTCGAGAGGTCAGAATGAGGCAGGGAGTGAGCAGTTTGCTAGATATGCACAGGAGATCGTCGTCGCAGCGTTGCGACGCTACATGGACAGCGTCGCGACGCTACCCCATTTCTGGATCTTTCCGCATAGCTGCCTCGCGTCGAGACGCTTCGGCCTAG

Coding sequence (CDS)

ATGACTGAGATATTGAGCCCGAGGCTATATGGTACAGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCAGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACGTTTCAGGACGGTCAACGGGTATTGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCCGGGAGACGGTGAGTCATGCCACCACGTACCGGCAGACGACGCAGGTAGAATCAGGACGGGATGCAGGATCCTACCCAAAGTCGATCTGAAGGGGGATCCAGTACCTCGAGAGGTCAGAATGAGGCAGGGAGTGAGCAGTTTGCTAGATATGCACAGGAGATCGTCGTCGCAGCGTTGCGACGCTACATGGACAGCGTCGCGACGCTACCCCATTTCTGGATCTTTCCGCATAGCTGCCTCGCGTCGAGACGCTTCGGCCTAG

Protein sequence

MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSSTFQDGQRVLLEEDDVRWLHAIFRTKLAGGPGDGESCHHVPADDAGRIRTGCRILPKVDLKGDPVPREVRMRQGVSSLLDMHRRSSSQRCDATWTASRRYPISGSFRIAASRRDASA
Homology
[Close]
BLAST of Spg021635 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-31
Identity = 82/141 (58.16%), Postives = 91/141 (64.54%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSSTFQ-----------------------------DGQR 76
           VEIELPVPDTLPTSAESS S+SS+  +                              G  
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 77  VLLEEDDVRWLHAIFRTKLAGGPGDG----ESCHHVPADDAGRIRTGCRILPKVDLKGDP 125
            ++  DDV WLHA+FR K  GGPG G    ESCHHVPADDAGRIRTG RILPKV+LKGD 
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDAGRIRTGRRILPKVNLKGDL 213

[Close]
BLAST of Spg021635 vs. NCBI nr
Match: TYK26572.1 (putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-31
Identity = 82/141 (58.16%), Postives = 91/141 (64.54%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSSTFQ-----------------------------DGQR 76
           VEIELPVPDTLPTSAESS S+SS+  +                              G  
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 77  VLLEEDDVRWLHAIFRTKLAGGPGDG----ESCHHVPADDAGRIRTGCRILPKVDLKGDP 125
            ++  DDV WLHA+FR K  GGPG G    ESCHHVPADDAGRIRTG RILPKV+LKGD 
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDAGRIRTGRRILPKVNLKGDL 213

[Close]
BLAST of Spg021635 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-17
Identity = 61/113 (53.98%), Postives = 67/113 (59.29%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSSTF---------QDGQRVLLEE--------------- 76
           VEIELPVPD LPTSAESSRS+SS+           +   +V+L+                
Sbjct: 147 VEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVR 206

Query: 77  -DDVRWLHAIFRTKLAGGPGDG--------ESCHHVPADDAGRIRTGCRILPK 97
            DDV WLHAIFR K AGGPG G        ESCHHV ADDAGRIRTGC ILPK
Sbjct: 207 GDDVCWLHAIFRAKTAGGPGGGVTTWYQSQESCHHVLADDAGRIRTGCSILPK 259

[Close]
BLAST of Spg021635 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-17
Identity = 61/113 (53.98%), Postives = 67/113 (59.29%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSSTF---------QDGQRVLLEE--------------- 76
           VEIELPVPD LPTSAESSRS+SS+           +   +V+L+                
Sbjct: 147 VEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVR 206

Query: 77  -DDVRWLHAIFRTKLAGGPGDG--------ESCHHVPADDAGRIRTGCRILPK 97
            DDV WLHAIFR K AGGPG G        ESCHHV ADDAGRIRTGC ILPK
Sbjct: 207 GDDVCWLHAIFRAKTAGGPGGGVTTWYQSQESCHHVLADDAGRIRTGCSILPK 259

[Close]
BLAST of Spg021635 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 8.1e-15
Identity = 55/100 (55.00%), Postives = 62/100 (62.00%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSS--- 60
           MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS S+SS+   
Sbjct: 1   MTEILSPRLYGTVCTQVIFPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLE 60

Query: 61  TFQDGQRV-------LLEEDDVRWLHAIFRTKLAGGPGDG 74
            + +   V       ++ EDDV WLHA+FR K AGGPG G
Sbjct: 61  LYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGG 100

[Close]
BLAST of Spg021635 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.8e-32
Identity = 82/141 (58.16%), Postives = 91/141 (64.54%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSSTFQ-----------------------------DGQR 76
           VEIELPVPDTLPTSAESS S+SS+  +                              G  
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 77  VLLEEDDVRWLHAIFRTKLAGGPGDG----ESCHHVPADDAGRIRTGCRILPKVDLKGDP 125
            ++  DDV WLHA+FR K  GGPG G    ESCHHVPADDAGRIRTG RILPKV+LKGD 
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDAGRIRTGRRILPKVNLKGDL 213

[Close]
BLAST of Spg021635 vs. ExPASy TrEMBL
Match: A0A5D3DSY7 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001810 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.8e-32
Identity = 82/141 (58.16%), Postives = 91/141 (64.54%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSSTFQ-----------------------------DGQR 76
           VEIELPVPDTLPTSAESS S+SS+  +                              G  
Sbjct: 94  VEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLVGST 153

Query: 77  VLLEEDDVRWLHAIFRTKLAGGPGDG----ESCHHVPADDAGRIRTGCRILPKVDLKGDP 125
            ++  DDV WLHA+FR K  GGPG G    ESCHHVPADDAGRIRTG RILPKV+LKGD 
Sbjct: 154 GIVRGDDVCWLHAVFRAKTVGGPGGGVTTLESCHHVPADDAGRIRTGRRILPKVNLKGDL 213

[Close]
BLAST of Spg021635 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 8.4e-18
Identity = 61/113 (53.98%), Postives = 67/113 (59.29%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSSTF---------QDGQRVLLEE--------------- 76
           VEIELPVPD LPTSAESSRS+SS+           +   +V+L+                
Sbjct: 147 VEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVR 206

Query: 77  -DDVRWLHAIFRTKLAGGPGDG--------ESCHHVPADDAGRIRTGCRILPK 97
            DDV WLHAIFR K AGGPG G        ESCHHV ADDAGRIRTGC ILPK
Sbjct: 207 GDDVCWLHAIFRAKTAGGPGGGVTTWYQSQESCHHVLADDAGRIRTGCSILPK 259

[Close]
BLAST of Spg021635 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 8.4e-18
Identity = 61/113 (53.98%), Postives = 67/113 (59.29%), Query Frame = 0 

Query: 17  VEIELPVPDTLPTSAESSRSSSSSTF---------QDGQRVLLEE--------------- 76
           VEIELPVPD LPTSAESSRS+SS+           +   +V+L+                
Sbjct: 147 VEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVR 206

Query: 77  -DDVRWLHAIFRTKLAGGPGDG--------ESCHHVPADDAGRIRTGCRILPK 97
            DDV WLHAIFR K AGGPG G        ESCHHV ADDAGRIRTGC ILPK
Sbjct: 207 GDDVCWLHAIFRAKTAGGPGGGVTTWYQSQESCHHVLADDAGRIRTGCSILPK 259

[Close]
BLAST of Spg021635 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.9e-15
Identity = 55/100 (55.00%), Postives = 62/100 (62.00%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSS--- 60
           MTEILSPRLYGTVCTQ                 VEIELPVPDTLPTSAESS S+SS+   
Sbjct: 1   MTEILSPRLYGTVCTQVIFPLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLE 60

Query: 61  TFQDGQRV-------LLEEDDVRWLHAIFRTKLAGGPGDG 74
            + +   V       ++ EDDV WLHA+FR K AGGPG G
Sbjct: 61  LYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGG 100

The following BLAST results are available for this feature:
BLAST of Spg021635 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062409.11.6e-3158.16reverse transcriptase [Cucumis melo var. makuwa][more]
TYK26572.11.6e-3158.16putative Retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0037581.11.7e-1753.98reverse transcriptase [Cucumis melo var. makuwa][more]
TYK03091.11.7e-1753.98reverse transcriptase [Cucumis melo var. makuwa][more]
TYK27998.18.1e-1555.00reverse transcriptase [Cucumis melo var. makuwa][more]
BLAST of Spg021635 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg021635 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V9N37.8e-3258.16Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
A0A5D3DSY77.8e-3258.16Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3BTP38.4e-1853.98Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A5A7T7M68.4e-1853.98Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5D3DX393.9e-1555.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38... [more]
BLAST of Spg021635 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021635.1Spg021635.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016779 nucleotidyltransferase activity