Spg021622 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTAGGAAAACCCTTTTTCCCCCTTTCTCTATTTCTCCTGATGGGAGTTGTAGGTAAAATTATTGTTTGTAACTTTTCAACATTAACTGGTTTTTTTTTTTTATAAAAAGGTTATATTTCTTACTAAATGGTAAATTTCGGATTTGTTTGTTTAGATTTTTTAATGTTTAGTAATTCTCTTATCATGGCAGGTAAAAATTTGCAGCACTGAAATGCATGTTATGGTATTATATTAAACATCAAACTTTAATTGATCTGAATTTTGGTTCTCTAATTATCGAGGTCATTGGCTGGACGGGTGAGAGGAAGCCAAGTCAACAAAATAGTGGAGATTGTAGGCTTGGAAATTTATTGTTCATGTCAAAGTACAAATGCTGTGGAGGGATGCAAAGAACCAGGGGGGACTAAAGTGAGCCCATTGGAAGAAAAAATTGGCTTCATATTAGCTCCATGTGATGCAGTTTTGTCACTTATGGTAAGATTTGAATATAGATAACTTGATTGTTGAATATTTGCTTCCCTTGCTTGATGAGAGGCTTCTATGTTAGAAAATAACCTTTGTTCCTTTTGGTATTATCATTATTATTTACCTCTGATTTTTCTTCTTTATTTTCTTTTGTGCAAAAGATTAATTACATTATGGAACGATTTGGATCTAAGAGACCACAAAGACTTGAGATAAGTAACATTGTCCCAAAGACGATCAAGAGAACTTTGAAGATGCAATTATTTCTTTCGAGGCAAAGCATCTAGAAAAATAAGCTCTTGAAGAGCAAGTTGGATAGACTATAGAAGCCCTATCCTCCTCCGTGATAGTAGTGCCAGCCTCTGAGTCCAAATTCCTGATTAGAGAGAGTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTCTGAGTTTGGACAAAACCAAATGCTTCTTCGTTTCTAGCTTTAATCCTTTCCCCAACCTTTTTAAGTTTGATTTAAAAAACTAATATTTCTGTTGGCATTTTTTTTCTTATTTGGCCGGGGGGAGGGGGGGATGAAAAATTATAAAAGAGTACCAACAAATACAACGTAACAAAAAACTAGAAAAAGAAACACAAGTTCTGAACCCAAACAAGCTTTAAAAGATAAATTGAAAAGACAACTATGAACTGAAAAAATAAACAACCAATCAAATAAAGAATAGATCGATCACCAAATATGACAGAACGCAAAAGATAAAAGAGCACTGAAAAATGCCAAGGAAAGATCTGGCATTTTTGAGAAGAAAAACTAGAACAGCCATCTAGCCAAAGCCACAAAAAGTAATGCCACCTAATCCAAAAACTGCACCATTCGTCAGCCAAAAGGAAAGATCAACTAGAAAACTCATAAATGGCCTAGTTTCCCGAAAGAAGATTTTGGCTTTTGCATTTTTGTGAATTTTTTAAGTTTTCCTTCAGACTTTTTGACTCTCAATTAATGGTATAAGTGCAGTAGCTTGTCCAGTGGAAGAAATCTATGAGCCACACAAGTTAAAGTTTCCTTTTTGTGATTGGCCATGGCCAGAATGAGGCCTTTGGCTTGCCAAATACGGATGAGCTTCTTGGAAGAAAGATTTGTTCTTATTTGATTTTGTGGTGTCAGGCATGTCAGCTAGAAATTTCTGTTGGTTTTTTTTGGATAGAATCTGTTGGGTTGGGTCGGCATGGATGTTCAATTATTGTTCCTTTTTAAAATCGTATACACACTTTGAAGCCCTTTGAATAGACCATGTTTTAGGTAATTTCAAAAATTATTTTTGATGAAGTACTTAATTAATATTTTCCCAAAAGTGCCAATCCGAGCATAGTTCATTGGATAAGGCACCAATTACCATCTCAAAAGTTGATGGTTTAATTCCCCACTCTGCAATTATTGAACTGAAAAAAAGATATATTTTTTCATATAAAAGCACTACCTTCGAATGCCCATCTCGAAAAACAAACCCTTATTTTGTAGGTTTCGATGTTCTTTCTCTCTCTTTTTTTTGTAATGCTTATACTTGTTGACAGTTGATAAAAAGACGTCATGAAGATCGTTTTTCATTTTATAGGTTAACAGATCAGGAAAGCTCGATAATAGTACTCCACAATATTCTGTGAATGCTGACTTAAGTAGCCTGGTTGGTGCATTCTCCTCTAATTTTCCCATTGTTATACAAAATGATTCGACCATAGTTTTGGAGATGAATGCATATTTTTCCTCTTTTAGGTGTTCACTTTGAACGACGTTCAGTTGCAGCAAATATTGAATTTTTGGGATTATATTTCCATATGCCGATTAAGAGATAAGTAAGTTAACTGTTTTTGTTCGATGTAGCATATCTATTGTGTGAAGTTTTTCCTTCTGCTTTTGAAGCTGTTTCGCCACTTTAGGTCTTTTTTTTGGTTTTAATTTTTTTTTTCTCGTCCTTTTGTGATTACTTTGGCCTTTTGTGTTTTTTATGTTATTAGATTGTTTTATTTGTTTAAGAGAAACGAAGTGGCTGTTGTTTTTGTTTTTTTTTTCTTCCCTCTGTATAAGAAATTTAGTGATTGTCTTATAAGCTCTCCCTTTGTTTGAACTCATTCTCATTGTGAATGAGTTCAAGCAAAGGGAGAGCTTATAAGAATGCTTGCCAATTGGTCAATAACATGATAAAAGGATAATTGTAAAATGCTTTGGTTTTAAGGGCCTACAAAGGCATGAAATAAGTTATACCTTCCATAAGCTTGTCGAAGGGATGCTCTATGCCACAGTAGATGCATCTATTCCTCTCGACCCATATCACTCAGCAGATTAGTGGAGAAGCCACAAAGTATGTACCTGATCAGAGAGAGGCTGATTGAAGAAAAGTAAACTTGATGTCTCTGTGTGGAACGCAATCAACTTTGAGATCTTTGTGGAAGGAAGACTAGAAGTAGGCTGCAAGACATGAACATGTGGTTCACCATCTGAAGCCTCTGTTCTTTGTTT ATGTGTAGGAAAACCCTTTTTCCCCCTTTCTCTATTTCTCCTGATGGGAGTTGTAGGTCATTGGCTGGACGGGTGAGAGGAAGCCAAGTCAACAAAATAGTGGAGATTGTAGGCTTGGAAATTTATTGTTCATGTCAAAGTACAAATGCTGTGGAGGGATGCAAAGAACCAGGGGGGACTAAAGTGAGCCCATTGGAAGAAAAAATTGGCTTCATATTAGCTCCATGTGATGCAGTTTTGTCACTTATGGTTAACAGATCAGGAAAGCTCGATAATAGTACTCCACAATATTCTGTGAATGCTGACTTAAGTAGCCTGGTGTTCACTTTGAACGACGTTCAGTTGCAGCAAATATTGAATTTTTGGGATTATATTTCCATATGCCGATTAAGAGATAAGTAA ATGTGTAGGAAAACCCTTTTTCCCCCTTTCTCTATTTCTCCTGATGGGAGTTGTAGGTCATTGGCTGGACGGGTGAGAGGAAGCCAAGTCAACAAAATAGTGGAGATTGTAGGCTTGGAAATTTATTGTTCATGTCAAAGTACAAATGCTGTGGAGGGATGCAAAGAACCAGGGGGGACTAAAGTGAGCCCATTGGAAGAAAAAATTGGCTTCATATTAGCTCCATGTGATGCAGTTTTGTCACTTATGGTTAACAGATCAGGAAAGCTCGATAATAGTACTCCACAATATTCTGTGAATGCTGACTTAAGTAGCCTGGTGTTCACTTTGAACGACGTTCAGTTGCAGCAAATATTGAATTTTTGGGATTATATTTCCATATGCCGATTAAGAGATAAGTAA MCRKTLFPPFSISPDGSCRSLAGRVRGSQVNKIVEIVGLEIYCSCQSTNAVEGCKEPGGTKVSPLEEKIGFILAPCDAVLSLMVNRSGKLDNSTPQYSVNADLSSLVFTLNDVQLQQILNFWDYISICRLRDK Homology
BLAST of Spg021622 vs. NCBI nr
Match: XP_031736163.1 (uncharacterized protein LOC101204937 isoform X2 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46 Identity = 98/114 (85.96%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of Spg021622 vs. NCBI nr
Match: XP_011660209.1 (uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46 Identity = 98/114 (85.96%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of Spg021622 vs. NCBI nr
Match: XP_031736164.1 (uncharacterized protein LOC101204937 isoform X3 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46 Identity = 98/114 (85.96%), Postives = 102/114 (89.47%), Query Frame = 0
BLAST of Spg021622 vs. NCBI nr
Match: XP_022960657.1 (uncharacterized protein LOC111461381 isoform X1 [Cucurbita moschata]) HSP 1 Score: 196.1 bits (497), Expect = 2.0e-46 Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Spg021622 vs. NCBI nr
Match: XP_022988633.1 (uncharacterized protein LOC111485823 isoform X1 [Cucurbita maxima]) HSP 1 Score: 196.1 bits (497), Expect = 2.0e-46 Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Spg021622 vs. ExPASy TrEMBL
Match: A0A6J1JMV4 (uncharacterized protein LOC111485823 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485823 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 9.6e-47 Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Spg021622 vs. ExPASy TrEMBL
Match: A0A6J1H814 (uncharacterized protein LOC111461381 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461381 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 9.6e-47 Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of Spg021622 vs. ExPASy TrEMBL
Match: A0A5A7T5L4 (Putative vacuolar protein sorting-associated protein 13A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00620 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46 Identity = 98/114 (85.96%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of Spg021622 vs. ExPASy TrEMBL
Match: A0A1S3B8J3 (putative vacuolar protein sorting-associated protein 13A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487212 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46 Identity = 98/114 (85.96%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of Spg021622 vs. ExPASy TrEMBL
Match: A0A1S4DUY4 (uncharacterized protein LOC103487212 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487212 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46 Identity = 98/114 (85.96%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of Spg021622 vs. TAIR 10
Match: AT5G24740.1 (Protein of unknown function (DUF1162) ) HSP 1 Score: 92.4 bits (228), Expect = 2.9e-19 Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 0
BLAST of Spg021622 vs. TAIR 10
Match: AT5G24740.2 (Protein of unknown function (DUF1162) ) HSP 1 Score: 92.4 bits (228), Expect = 2.9e-19 Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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