Spg021546 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021546
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 8258168 .. 8259371 (+)
RNA-Seq Expression	Spg021546
Synteny	Spg021546

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGACGCCAGAGGAGAAAGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGCCAAGGATCAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAGCAGAGGGTCGCGGATACAGAAGAAGTTCAAGAGGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCAAGAAGAAATTACAGAGGAAATTCAAGAAAAGCAGGTCGAGGATGTGCAAGAGCAACAAGCAGATGATGTTCAGGTAACGGATAATGAGCCAGTACAGGAGGCTCAAGTGGAGGTGATCATGCCAGAAGTAGCAAAACGTCGCCGCGTTAAGAGGAAAGCAGGCCACGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGGAAGAGAGAAAAGAAGGAAGCTGAGGACAAGGCTAGAGAAGAAGAAGCAAAGAAAGCGGAAGAAGAGATTTTGCCCAAACAAGCGGAAGACAAGGGCAAAGGTATTGCTGAGGCATCGGGTGAGGCTGACGAGATTGAGGAATCGAGATTTCTGTATAATCACTTCATCAATAACCTTGCTCGGGCAAAGTATTCTTGACATGCTGAGAAGGGACTTCCTGTTTGAACGAGGATTTGGCGATGATCTGCCATGGTTCTTGAGGACTGGAATAGTGAACCTCGGCTGGAGTTAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTACGCAAATATAGGAATTTCAGGTTATCGTTCGAGGAGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATGCTTTGTTCAACGTCCAGGACTTTCCACACGCAGGCTTTAATGAGATGGTGGTCGCACCATCTAGCGACCAGCTAAACGCGGCTATCCGAGAGGTTGGCATCGAAGGGGCACAGTGGAGACTGTCGAAGACAGAGAAGCGCACATTTCAGGCTGCTTATTTGAAGAGCGAGGCCAATACATGGATGGGTTTCATTAAGCTGCGCTTACTGCCGACAACTCACGACTCAACGGTGTCTTGA

mRNA sequence

ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGACGCCAGAGGAGAAAGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGCCAAGGATCAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAGCAGAGGGTCGCGGATACAGAAGAAGTTCAAGAGGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCAAGAAGAAATTACAGAGGAAATTCAAGAAAAGCAGGTCGAGGATGTGCAAGAGCAACAAGCAGATGATGTTCAGGTAACGGATAATGAGCCAGTACAGGAGGCTCAAGTGGAGGTGATCATGCCAGAAGTAGCAAAACGTCGCCGCGTTAAGAGGAAAGCAGGCCACGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGGAAGAGAGAAAAGAAGGAAGCTGAGGACAAGGCTAGAGAAGAAGAAGCAAAGAAAGCGGAAGAAGAGATTTTGCCCAAACAAGCGGAAGACAAGGGCAAAGGTATTGCTGAGGCATCGGGTGAGGCTGACGAGATTGAGGAATCGAGATTTCTGTATAATCACTTCATCAATAACCTTGCTCGGGCAAAGTATTCTTGACATGCTGAGAAGGGACTTCCTGTTTGAACGAGGATTTGGCGATGATCTGCCATGGTTCTTGAGGACTGGAATAGTTATCGTTCGAGGAGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATGCTTTGTTCAACGTCCAGGACTTTCCACACGCAGGCTTTAATGAGATGGTGGTCGCACCATCTAGCGACCAGCTAAACGCGGCTATCCGAGAGGTTGGCATCGAAGGGGCACAGTGGAGACTGTCGAAGACAGAGAAGCGCACATTTCAGGCTGCTTATTTGAAGAGCGAGGCCAATACATGGATGGGTTTCATTAAGCTGCGCTTACTGCCGACAACTCACGACTCAACGGTGTCTTGA

Coding sequence (CDS)

ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGACGCCAGAGGAGAAAGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGCCAAGGATCAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAGCAGAGGGTCGCGGATACAGAAGAAGTTCAAGAGGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCAAGAAGAAATTACAGAGGAAATTCAAGAAAAGCAGGTCGAGGATGTGCAAGAGCAACAAGCAGATGATGTTCAGGTAACGGATAATGAGCCAGTACAGGAGGCTCAAGTGGAGGTGATCATGCCAGAAGTAGCAAAACGTCGCCGCGTTAAGAGGAAAGCAGGCCACGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGGAAGAGAGAAAAGAAGGAAGCTGAGGACAAGGCTAGAGAAGAAGAAGCAAAGAAAGCGGAAGAAGAGATTTTGCCCAAACAAGCGGAAGACAAGGGCAAAGGTATTGCTGAGGCATCGGGTGAGGCTGACGAGATTGAGGAATCGAGATTTCTGTATAATCACTTCATCAATAACCTTGCTCGGGCAAAGTATTCTTGACATGCTGAGAAGGGACTTCCTGTTTGAACGAGGATTTGGCGATGATCTGCCATGGTTCTTGAGGACTGGAATAGTTATCGTTCGAGGAGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATGCTTTGTTCAACGTCCAGGACTTTCCACACGCAGGCTTTAATGAGATGGTGGTCGCACCATCTAGCGACCAGCTAAACGCGGCTATCCGAGAGGTTGGCATCGAAGGGGCACAGTGGAGACTGTCGAAGACAGAGAAGCGCACATTTCAGGCTGCTTATTTGAAGAGCGAGGCCAATACATGGATGGGTTTCATTAAGCTGCGCTTACTGCCGACAACTCACGACTCAACGGTGTCTTGA

Protein sequence

MAKTRARKERENEDEEVPVTPVAQKAKTKKKKTPEEKEAKRRRKQQRAKDQEALQKATDDVAATVVEENPKEPEEQNLEQTEQRVADTEEVQEEQTEEVREENTEEVQEEITEEIQEKQVEDVQEQQADDVQVTDNEPVQEAQVEVIMPEVAKRRRVKRKAGHARVVRTNTPSPPTTDSERENAGREKRRKLRTRLEKKKQRKRKKRFCPNKRKTRAKVLLRHRVRLTRLRNRDFCIITSSITLLGQSILDMLRRDFLFERGFGDDLPWFLRTGIVIVRGVPVDWSPGAINALFNVQDFPHAGFNEMVVAPSSDQLNAAIREVGIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVS

Homology

The following BLAST results are available for this feature:

BLAST of Spg021546 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021546 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021546 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021546 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 71..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021546.1	Spg021546.1	mRNA