Spg021535 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACGAGCAGTGCAAGCTTTGGCCAACATCATATCATCCACCCACATAGTATACTTTCTGACATTATTTATATTTTCTCAATTAAACATTAGGTAGTCTTAATGCAGTGTCAATAATTATACTATATCTTGACTGTGGTTGATCCATTTATGCTGACAACTTATTGGTTTAAAATCTTTTTGTTCACAAAAGATATATAAGCTTATTTTACATAACTTACTGGTAAGTTTCTATCCTAGCGGCTGGAACTTACTTCCCCTATTATCTCTTTCTCAATGTCAGCAATATTGATGGTATCACCGGATTTAATGAAGAGGACACACAATCAGTTTTTGGCTTCATGCAGATAGCAATCAAATTAGCACGATCGTCCAATAAATCGGTTAGTTAATGTACTTTTGTTTTCCTCAGCTGTAGCCAATCCTTGATTTGTTCTTTGGATTTATGCTGCGTCGTTATTATTATTAATTAGCTCTGGTTTTCTCGTTTGGCTTTTCTAATTTATTGTCAACTGCCTTCTCTAAAAAAAAAATTTATTGTCAACTGCAGTTTTTTAGTTTGTCTTATTTCCCAGGTTCCTTCATATGCTTTAGCTATATGGCCTTTAGAATTTAGATACTAAGCGGCAACATTTTGTTTGAAAATTGTGGTGCCATGTTTCAACTCTTTTGAACAGTTAGGTTAGCCAAATATTCTAACTTTACTTTACGTCTGAGTAAGATAGGTTAGTGAATTTAGTTCTGGAATTTTGGAGCTTCTACCTTTAGTTGGTTTGAACAGTTTTCGAGTATCTGGTTATTTGTGTTTGAGGAGCGAAAGTGAGAATTGTTTTTTCTTTTAGATAGTCTATTTTAGCATCTAAAAGACTAGCTATTTAAAGAAACAAATAGTCATCTCTCTTAAATATTACCGTGCAGGTAACTAGGTAAGTAAGGGATAGCTATGCCTTCTGGCCCATGAATCCCTTGTGTTATCTCTCTTTTTGGAAGGGTGTTTATATATTCTATTGAAATTTTGCAGGTAGTAAATGCTGCAGTAATTGTAGATCCTTCAGTTAAGCAAATAATTGCAAGTGCTTGTGATCATCATATTTCCTCCAAGAATGCTTCCACTAGCGATGCCAACGGGGAAATAGACTTTGAAAAGCGGCTGGAATCTATTGGTTCTCATCTTGATTCCAATGGAGCCACCATCCATGGAACTTTGCCCTCAAGTGCTTCTTTGAAAACACTGAAGCAATCATGTTTTGATGTTTCGTGTTTGTATCCCTGGCGATGGGTTGACCAACAGTCACAATATTCATCAAATTCTTGTTGTAGGCACCCTCTAAGGCATGCTGCTATTGCAGCTATTGAATCTTCTGCTGCACGGGATCGTCGTTTATTCCCAACTGCTGAAACCTTTGTTGATAAATCAGTTGGAATGGAGGATATTGGGTCTCCATGCAACCTAGCAAAAAGACAGAAGACTGATATCGAAAATGTAAGCTAAGCATGTTATTAAGTGAACTTTTTTTAATTAATTATAAAAAAGAGATTAGTATCTAACGTCCTTATATGAGAGACTACAATGAAATAGAATAAGGGGTATGCCAAGAAAAGTCAAAAGGAAAAGGGTAAAACTAAGAGTACGGCTTGTCTCCATCTTTTAGTAGTCTACCTTTTCTCAGGCAATCCAACATACATGTACTTCTCTTTGTACTTTTGTCTGTATTTATTTATAGTTTAAATCTTATTTCGTAACTTCCATGCTGTTTTCTTTTCGGTTTATAAACATTCAATGATTTTGTTTTAGTTATTGAACTTTCCATGAATAGTTATTTGTATTTACCTTAATTTTTTTTAATTATATTATTTACTAGAAACTTGACATAATACATATTTTCCTCATGCCTGACAGATGAATATGAGATATATACATACATGGCCAAGTGTTTGTAAAATGATTAATGAAGTATTAATAATGGTAAGAGTTTATAGATAAAGTTTCGGGATTAAAGTAGAACATTTGAAAAAATACTGAAACAGAACCATAGAAAGTTTTAGGTTCTAAGGACTAAAATGAAACAAATTTTAAATTTTAGAGACCAAAAGATGATTGAAATCCATATTTATTTGGTCTAGAGGAAAGTAAAGGGGTGGGGAGGGGAGATCAATTGCATGGAATAAATTTTGAGTTTGAGCTTGCTGTTAACTTCATATATTAATCTTTTTGTGCCTAAGAACGTAAGAAATGCATTATGGTCAATATAAGTTTGCTGATATTCGGGTTCGCATGCCATCATGAAGTGTCTGAAGCATCTCATATGATATATGAAAATAATCATTGTTTTTTGATATTATCTCCTTTTGTTTTTGAGCTTGAGATCCAAATATATTTCTGTTTGACAAAACCAACTATATATATGTGAAGATTGTTGTGTGTTGTACAGGCCAAAAGCAAGGAGGAGAAGGTAGGTACTGATGCTGAAGGCATATATTCTAAATCAGGCAGACCTTATCTGTGCACTGGTTATGACATTTATCTTGTGTGGGAGCCATGTATTATGTAAGTTCACAAAATGAATCCTTACTTTTCCTTGTTTTTGATCTGTGGCTAGGCATTTTACAGCATCTTCCATGTGTTCATCTTTTCTATGGTTTTATGTGCTTAGATTTAATCTATGAAGCACGGACACGCCAAAATGGGGGGAGGATCTGTGTCGGACACGCGTCGGACACGGATTCGTCCGGACACGCTCCGGACACGTGTCCGACACGCAATTTTGAGTGTCCTATTTTTTTTTTTTTTTTTTAATTTCGGACACGCGGGGACACGGCTGGACACGCCCACGGACACGCCCTGGAGAGTCTAGGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGGCCGAGAGAGAGAGAACAAAAACCTCAAAGATGCCGCCGCTTTTCCAAAATCTCCCCTCAGGTTCATCTTCTTTTTTATCTTTTAAACCTTCCTTTTTAAAGTTAACCTAGATAAAAGGCCCAGCCCAATAAACCCTCCTTTTTAAAGTTAAGATTAAGATAAAAGGCCCAGCCCAATAAAAAACTGTTTTTAAATTAAAAAAAAATGAATAATTATTAAACTACTCATAAAATTTTATACATATACTATTTTTTTTTTAAAATCTATATATATACTAATTTATTTTTTTTTTAAAAAAATATATATATATATAAAAAAAAAACAACGTATCTTCAACGTGTCCGTATCTTAGTTTTTTAGAATTTGACGTATCGCCGTGTCCTGTCGTGTCCGTGTCCGTGTCCGTGCTTCTTAGGATTTAATTGTAGGAAGTGACTTTTTAGGCTAAATTATACCAAATTCCGTATGCAGTTGGTTTGTAATTTTGCTATAATGCTTCAGTTGTATCAATACAGACTCAATTTTTTTAATTCGTTCCAAGAAAACCCCTCTACTGGTAATTTTCCTTGATTGCCTGAGCCTTTTTATGATCTTTCCATTCTTTGTTCAAGGTGTGCAATGGCGCTCGTTCACCAACGAGTTAGGCGTGTGTTTTATGCGTTCCCGAATCCTAACGACGGGGCACTGGGCAGTGTTCACAGGCTACAGGGTGAAAGGAGCTTAAACCATCACTATGCTGTTTTTAGAGTTTTGTTACATGAAGATGTACTTTAGGTGTAGGTGGAGCTAGGGATATGACTAATTCAGATTTGGTTGTATTTTATTGTTAATCTAATCTATTCTTTTTCTTGGTGAATATTATGCTTTTAATACTCCTCAATGATGGTCAATTTCCACTTTTCTTCAAATCAATGACATTTATTTTTTATTTTTATTTTTTGATGGTGCATTATGGGACTCTACAAGTGAGATTTTGTTGCTTTCATTGAATTAGATGAAAGAATATAAAAAGGCTTAC ATGGGACGAGCAGTGCAAGCTTTGGCCAACATCATATCATCCACCCACATAGTATACTTTCTGACATTATTTATATTTTCTCAATTAAACATTAGCAATATTGATGGTATCACCGGATTTAATGAAGAGGACACACAATCAGTTTTTGGCTTCATGCAGATAGCAATCAAATTAGCACGATCGTCCAATAAATCGGTAGTAAATGCTGCAGTAATTGTAGATCCTTCAGTTAAGCAAATAATTGCAAGTGCTTGTGATCATCATATTTCCTCCAAGAATGCTTCCACTAGCGATGCCAACGGGGAAATAGACTTTGAAAAGCGGCTGGAATCTATTGGTTCTCATCTTGATTCCAATGGAGCCACCATCCATGGAACTTTGCCCTCAAGTGCTTCTTTGAAAACACTGAAGCAATCATGTTTTGATGTTTCGTGTTTGTATCCCTGGCGATGGGTTGACCAACAGTCACAATATTCATCAAATTCTTGTTGTAGGCACCCTCTAAGGCATGCTGCTATTGCAGCTATTGAATCTTCTGCTGCACGGGATCGTCGTTTATTCCCAACTGCTGAAACCTTTGTTGATAAATCAGTTGGAATGGAGGATATTGGGTCTCCATGCAACCTAGCAAAAAGACAGAAGACTGATATCGAAAATGCCAAAAGCAAGGAGGAGAAGGTAGGTACTGATGCTGAAGGCATATATTCTAAATCAGGCAGACCTTATCTGTGCACTGGTTATGACATTTATCTTGTGTGGGAGCCATGTATTATGTGTGCAATGGCGCTCGTTCACCAACGAGTTAGGCGTGTGTTTTATGCGTTCCCGAATCCTAACGACGGGGCACTGGGCAGTGTTCACAGGCTACAGGGTGAAAGGAGCTTAAACCATCACTATGCTGTTTTTAGAGTTTTGTTACATGAAGATGTACTTTAG ATGGGACGAGCAGTGCAAGCTTTGGCCAACATCATATCATCCACCCACATAGTATACTTTCTGACATTATTTATATTTTCTCAATTAAACATTAGCAATATTGATGGTATCACCGGATTTAATGAAGAGGACACACAATCAGTTTTTGGCTTCATGCAGATAGCAATCAAATTAGCACGATCGTCCAATAAATCGGTAGTAAATGCTGCAGTAATTGTAGATCCTTCAGTTAAGCAAATAATTGCAAGTGCTTGTGATCATCATATTTCCTCCAAGAATGCTTCCACTAGCGATGCCAACGGGGAAATAGACTTTGAAAAGCGGCTGGAATCTATTGGTTCTCATCTTGATTCCAATGGAGCCACCATCCATGGAACTTTGCCCTCAAGTGCTTCTTTGAAAACACTGAAGCAATCATGTTTTGATGTTTCGTGTTTGTATCCCTGGCGATGGGTTGACCAACAGTCACAATATTCATCAAATTCTTGTTGTAGGCACCCTCTAAGGCATGCTGCTATTGCAGCTATTGAATCTTCTGCTGCACGGGATCGTCGTTTATTCCCAACTGCTGAAACCTTTGTTGATAAATCAGTTGGAATGGAGGATATTGGGTCTCCATGCAACCTAGCAAAAAGACAGAAGACTGATATCGAAAATGCCAAAAGCAAGGAGGAGAAGGTAGGTACTGATGCTGAAGGCATATATTCTAAATCAGGCAGACCTTATCTGTGCACTGGTTATGACATTTATCTTGTGTGGGAGCCATGTATTATGTGTGCAATGGCGCTCGTTCACCAACGAGTTAGGCGTGTGTTTTATGCGTTCCCGAATCCTAACGACGGGGCACTGGGCAGTGTTCACAGGCTACAGGGTGAAAGGAGCTTAAACCATCACTATGCTGTTTTTAGAGTTTTGTTACATGAAGATGTACTTTAG MGRAVQALANIISSTHIVYFLTLFIFSQLNISNIDGITGFNEEDTQSVFGFMQIAIKLARSSNKSVVNAAVIVDPSVKQIIASACDHHISSKNASTSDANGEIDFEKRLESIGSHLDSNGATIHGTLPSSASLKTLKQSCFDVSCLYPWRWVDQQSQYSSNSCCRHPLRHAAIAAIESSAARDRRLFPTAETFVDKSVGMEDIGSPCNLAKRQKTDIENAKSKEEKVGTDAEGIYSKSGRPYLCTGYDIYLVWEPCIMCAMALVHQRVRRVFYAFPNPNDGALGSVHRLQGERSLNHHYAVFRVLLHEDVL Homology
BLAST of Spg021535 vs. NCBI nr
Match: XP_022948266.1 (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 [Cucurbita moschata]) HSP 1 Score: 476.5 bits (1225), Expect = 1.8e-130 Identity = 238/279 (85.30%), Postives = 255/279 (91.40%), Query Frame = 0
BLAST of Spg021535 vs. NCBI nr
Match: XP_022948268.1 (uncharacterized protein LOC111451991 isoform X3 [Cucurbita moschata]) HSP 1 Score: 476.5 bits (1225), Expect = 1.8e-130 Identity = 238/279 (85.30%), Postives = 255/279 (91.40%), Query Frame = 0
BLAST of Spg021535 vs. NCBI nr
Match: XP_022948267.1 (uncharacterized protein LOC111451991 isoform X2 [Cucurbita moschata]) HSP 1 Score: 476.5 bits (1225), Expect = 1.8e-130 Identity = 238/279 (85.30%), Postives = 255/279 (91.40%), Query Frame = 0
BLAST of Spg021535 vs. NCBI nr
Match: XP_023523264.1 (uncharacterized protein LOC111787511 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 475.3 bits (1222), Expect = 4.0e-130 Identity = 238/279 (85.30%), Postives = 254/279 (91.04%), Query Frame = 0
BLAST of Spg021535 vs. NCBI nr
Match: XP_023523263.1 (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 475.3 bits (1222), Expect = 4.0e-130 Identity = 238/279 (85.30%), Postives = 254/279 (91.04%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy Swiss-Prot
Match: F4KH86 (tRNA-specific adenosine deaminase TAD3 OS=Arabidopsis thaliana OX=3702 GN=TAD3 PE=1 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.7e-57 Identity = 137/285 (48.07%), Postives = 174/285 (61.05%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy Swiss-Prot
Match: Q96EY9 (Probable inactive tRNA-specific adenosine deaminase-like protein 3 OS=Homo sapiens OX=9606 GN=ADAT3 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.5e-18 Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy Swiss-Prot
Match: Q6PAT0 (Probable inactive tRNA-specific adenosine deaminase-like protein 3 OS=Mus musculus OX=10090 GN=Adat3 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.2e-17 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy Swiss-Prot
Match: Q561R2 (Probable inactive tRNA-specific adenosine deaminase-like protein 3 OS=Rattus norvegicus OX=10116 GN=Adat3 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.6e-17 Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy Swiss-Prot
Match: Q8JFW4 (Probable inactive tRNA-specific adenosine deaminase-like protein 3 OS=Danio rerio OX=7955 GN=adat3 PE=2 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-15 Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy TrEMBL
Match: A0A6J1G8T4 (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451991 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 8.6e-131 Identity = 238/279 (85.30%), Postives = 255/279 (91.40%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy TrEMBL
Match: A0A6J1G8Q3 (uncharacterized protein LOC111451991 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451991 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 8.6e-131 Identity = 238/279 (85.30%), Postives = 255/279 (91.40%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy TrEMBL
Match: A0A6J1G8W7 (uncharacterized protein LOC111451991 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111451991 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 8.6e-131 Identity = 238/279 (85.30%), Postives = 255/279 (91.40%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy TrEMBL
Match: A0A6J1IBE3 (uncharacterized protein LOC111471994 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471994 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 2.9e-126 Identity = 232/279 (83.15%), Postives = 252/279 (90.32%), Query Frame = 0
BLAST of Spg021535 vs. ExPASy TrEMBL
Match: A0A6J1I7K0 (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471994 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 2.9e-126 Identity = 232/279 (83.15%), Postives = 252/279 (90.32%), Query Frame = 0
BLAST of Spg021535 vs. TAIR 10
Match: AT5G24670.1 (Cytidine/deoxycytidylate deaminase family protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.9e-58 Identity = 137/285 (48.07%), Postives = 174/285 (61.05%), Query Frame = 0
BLAST of Spg021535 vs. TAIR 10
Match: AT5G24670.2 (Cytidine/deoxycytidylate deaminase family protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.9e-58 Identity = 137/285 (48.07%), Postives = 174/285 (61.05%), Query Frame = 0
BLAST of Spg021535 vs. TAIR 10
Match: AT1G48175.1 (Cytidine/deoxycytidylate deaminase family protein ) HSP 1 Score: 42.7 bits (99), Expect = 6.1e-04 Identity = 17/38 (44.74%), Postives = 23/38 (60.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|