Spg021503 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021503
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein DETOXIFICATION
Locationscaffold9: 5261407 .. 5266017 (-)
RNA-Seq ExpressionSpg021503
SyntenySpg021503
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCACCACAATTTTGCAGTATGCAATGCAAGTTGTTGCAGTGATGATGGTGGGACATCTTGGAGATGAGCTCTTGCTTTCTGGAGTTTCCATTGCTTCATCCTTCGTCAATTTCACTGGAATTATTGTTCTTGTAAGTCTTTCTCTTTCTACTCCCTTGGATTATTTTATATGTTAGGATGAATAATCATATGCCATAACTATTAAAAACAAATGCCTTTTTTTCTTTTTTGTTCATATCTCTCCTTTAAATGTGGGGCCACTTTTAATCATTTTCCAACAAATTAATGAATTGAAAAGTATGAATCTCCACTTCTATAGTTGAATCTAGTTCATAAAAATAAATTTTAAAAATAAACACTAAAATAATTTTAGTGCTTGAGGATCATCTTATAGTGTATTTAATTGGAGACATGGTTTTGTAAAAGGATAATTGTAATGGGGACAAATATAGTTATGGAAATAACAAATATAGCAAATTTAGAAAATATTTGCAGATATAGAAAAGTTTTTAAATCAAAATCTTTTATTTCCATTTCACCCCAATTTAAAATTGACGAGCGTTTCTCCTCCATCTTCTTCGTTTTCCTCCTTCGACCATCATCGATTTTTCTCCTTTCTTTTTGCGTGCAGGTTTTCGTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTGAATAATCTGGTTCTTCTTCGTTTATCATTTTCTTCTTCAATCATCCTCCAAATTTGAACCACACGTTATCATAAAGAGATTACTGGGTTAATGTGGTGGAATTGACAATAAAACTAAGGCACACTTCTTTGTCTGAAAGTCATCGACCATTATTGTACGGCCAATCTCTCCCAACTTGATTTTCTTATTTCTTAGGTCATTTTCATTTAATTAGCTCAACGAATCGATATCATAGCCACTGAATGTTTTGATTCTGGCTAAGTATGTTCTTTACAGAACTATTATTCTCAGTTTCTCATATTTTATTTTGTTTTTCTCGGTCGTTGTTTTCAATTCTGTGTTCTTTGAATTTCTGGGCACCAAATTTTGAGTTGTAATGATCTGATGTTTCGTTTCGCAACAAACATTTGAGATTCCCTATGGCTAAAAGCTCGTTCAATTTGGAGATAAACCGATTCCAACCGGTGATAGAAACCGATAGCTTGAATTAAATTTTTTTCTATTAGTGGCTATCACTGATAGAATTGAATTAAATTGGTTTCTACTAGTGATAGAAACTGATAGTCTTGAATTAAATTGATTTCTATCTATGATAGAAATTGATAGTCTTGAATTAAATTGTGTTCTATCCGTGACTATCACTGAAAGACTTGAATTACACTAATTTATATTAGTGATAAAAATTGATAAACTTGAATGAAAGCAGTTTCTATCCGTTTCTAATTTGAATTAATGTGATTTCTATAAGTGATACTTAAATTAATTGATTTTCTATCATCTATACGGTTTGAACATTAATCAGTAGTTGTTGTTTGCTAGTAATCGAGCCACTTAGCAACTAAAAGAATGGGAAGAATGAATATTTTTTTAATTAAATGATTTCTATCAATCCTATCCGTGGTAGAAATTGATAGACTTCAATTAATTGTTATCTATCTGGTGGGAACTAATAGACTTCAATTACTCATAAACCTATTAGTGATAGAATCTATCACTGATAGAAACCTATTAGTTATAGAATCTATTAGAGATAGGAACTGATCACTGATATAAATCTATCATCGCACTGATAGACTTCTATCAGCACTGATAGATTTCTATCTTCTATCAACGATAGAACTCTATCGCTGATAGACTTCTATCAGTGATATTTTATCGTCAATAGAATTCAAACATTTTAAATGGTTTTTTTTTTAATTTTTGTTTTACCTCTCATTTGATTTTAGACCACATTTTTCCCTTCTTCGTTTTTTTTTTCCTTTTCTTTGATATACTTCTATCGGTGATAGAATTCTACCGCTGATATGATAGATTTCTATCTCTAATAAATTCTATCAGTGATAGATTTCTATCGCTGATAGATCTATCACTTTGCAATTACTTTTTTCTTCTATACCCTAAAATGATACAAGCAACTATATAGACCAGTGAAGGTTATCGGCTGCAATTATTTTGTCTTCTACACCCTGATAGATTCTGTCAATGATAGAACTCTATCTCTGATAGATTCTATCAGTGATAGAACTAGATTTTATCAGTGATAGAATTGATAGAATCTATCGGTGATAGAATTCTATCACTGATAGAACTGATAGAATCTCTCAGTGATAGATTTTAATCAGTGATAGAACTGATAGAATTCTATCGGTCACTAATAGAAGTGATAAAATCTATCGGTGATAGAATTCTATCACTGATAGAACTGAGAGTGATAGAATTAAGAAGTAAATAGTAGAGAACGACTTACATCTTCGATCGAGAAAACATTTTCATCTAGCTCACTCCAATCCAATGTATCAAGCATCTCCCATTGAACTAGATTTCAATGGTGATAGAAGATTTCTATCACTGATAGAAATTCGTTTGATAGAAGATCAAAATGGCTGATAGAAGATGAAATGGAAGATTGAGGGTTCAGGGTTTAGGAAAGGGAATTTTAGTAAATGCGGCGCTCAGACCATCAAATTTTGCCATTTTTGCAAATCTTTTTTGCGGGCTGCTTGATTTGCAAATACTTTGGCCCAATTTCCTATACTTGCAACCGGCCCTTTATAAAATTATATGGGCTTCGGATGAGAAAAAATTATTACAACTCCATCTCTCTAATGAAATTGAAATGGACAGTAGTAGAGGATAAGATATTTATTTGAGTGGGTTTGAGACCTTCATTTTAAAGTTTTCTAGGAAGCAAATCAAATAACCTTTCGAAACAAATTTATTTTCTAATATTCAAAATGTTTAAAAAAGTATTGTTAAAAAAAAAACAAAAAACAAAAAACATCTAGTAGTTATAAAGTAGATACTAGTGACGCTTTTCATGTGGTTGGATTTCTCAACCTCATTCACAAAATCACTTCTGTGGAACAAAATTTCCTCAGTGAGCAACAATGCAACCAAATGTTGTCTTAGTGTATGTTTGGGAGTGATTTTGAAATGACGAAAATCACTTTTGTCATGTTTGAAATCACACCGAAACATACCTTTAATTTTTCAAAATCAATTTCATGTTTGATTTTACACTTTTAAACGTGATTTTCATATCATTAAAATTGATTTTGAATTATTAAAGACATGTTTCAAAGTGATTTTAAATATGACAAAAGTGATTTTAAGTATTTTAAAATTACTCCCAAACATGCACTTAAGCTACTTAGAAAACTTTTTCCATTTCACCATATGCATGGCACAAGTGAAAAGCTTCCAAATAAAAGATATTCTAACATGCGAGCTATAACTAATTAATATAATAGCATAGTTGTGCTAGGGCCAATTGTGAGGATTCTTAGCCACATGGTGGCTTATAAATCTCCTCTCCTTTGTTGTACTCATTTGCTTCATTTTTTATGTTGCATGTCAAATTAGTTCCCTAAGCTATAGTCCTTATTAGTGACGGGAGAACTAAGGGTGTGTTGGATTTAACTTTTCCAAAGTTTAATTTTGAAAAAAAAAATCATTTTGAAAAAAATTACAATATTCTGCAATCACTAAAAATAAGTTATTAAAAAATTAAATTAAGAAATGAACAATTTTGAGAGAAACACTTAATTGAAACCGATTTTTTAAAAAGAGTTTTTAGTAGATAATAACTTGGGTATAAAAATATTTTATATGAGGAAATGTAACCAAACATATGAGTGTTTAAATTCTAAATAAGTTTTATACAAAATGTTTGAAATAAAATACATTCTTGAAAAACATTTAAACTAAAAGACATTCCAAACGGATCCTAATTTAATGAATTGACCTAGGTACCTTTTGGTTATGCAAATCCCTAACACACATGCACTATAACCCACAAAGTCAAATTGATTTAACTTTAAAAACTAAGTCAGGTACGAATTATCTTTCAATCAAAACCTAAGAGTCCTTCACTCCAAGGTTGAAAACACTGCAATTTTGATGACTAATCAACCTTGAATGTTTCTAGAACATCCAAAACTAGACACAAGAGTTGCATTAAGAGTTTCGATGATCTCAACTAGTGAAAGGAAAAATATACTCAATTTCATTAATCAAATATTGTTTACAAATGAATTCCGCTTGGTTTTAACAATGAGCTACTATAATTAAAATTACTATAAAAAGAGAATTGATCTCCTTGAAAGGAAACTTTGAATAATAAAGACCAAGATGAAATTTGAAGTATAGAACGATATATAGAAAAGAGAAAATAAGGTCATGCATAGAGGACATAAATGCAAAGGTCTACATAGGCGGCATAAGTGCAAAGGAATTGTATCTTGGGTGGGCATATATGTGCATAAGGTGCAATGGTTTTGGCTGGTGGTGTGCGCATTGATATGGCATATACACAAGGCTTGGACACATACAAGAAAAATGTGTCAAGTGGACATGGCCTCCACCATGAGTTGGATCTCAACTTGGCACTTAGTCAATTGTTGCCTTTTCTTCTTGCACTCTTCTTGGATTGA

mRNA sequence

ATGGCTGCCACCACAATTTTGCAGTATGCAATGCAAGTTGTTGCAGTGATGATGGTGGGACATCTTGGAGATGAGCTCTTGCTTTCTGGAGTTTCCATTGCTTCATCCTTCGTCAATTTCACTGGAATTATTGTTCTTCCACTGAATGTTTTGATTCTGGCTAAGTATGTTCTTTACAGAACTATTATTCTCAGTGCAATGGTTTTGGCTGGTGGTGTGCGCATTGATATGGCATATACACAAGGCTTGGACACATACAAGAAAAATGTGTCAAGTGGACATGGCCTCCACCATGAGTTGGATCTCAACTTGGCACTTAGTCAATTGTTGCCTTTTCTTCTTGCACTCTTCTTGGATTGA

Coding sequence (CDS)

ATGGCTGCCACCACAATTTTGCAGTATGCAATGCAAGTTGTTGCAGTGATGATGGTGGGACATCTTGGAGATGAGCTCTTGCTTTCTGGAGTTTCCATTGCTTCATCCTTCGTCAATTTCACTGGAATTATTGTTCTTCCACTGAATGTTTTGATTCTGGCTAAGTATGTTCTTTACAGAACTATTATTCTCAGTGCAATGGTTTTGGCTGGTGGTGTGCGCATTGATATGGCATATACACAAGGCTTGGACACATACAAGAAAAATGTGTCAAGTGGACATGGCCTCCACCATGAGTTGGATCTCAACTTGGCACTTAGTCAATTGTTGCCTTTTCTTCTTGCACTCTTCTTGGATTGA

Protein sequence

MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVLPLNVLILAKYVLYRTIILSAMVLAGGVRIDMAYTQGLDTYKKNVSSGHGLHHELDLNLALSQLLPFLLALFLD
Homology
BLAST of Spg021503 vs. NCBI nr
Match: KAG6592361.1 (Protein DETOXIFICATION 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAATTILQYAMQVVAV+MVGHLGDELLLSGVSIASSF N TGI VL
Sbjct: 23 MAATTILQYAMQVVAVIMVGHLGDELLLSGVSIASSFTNVTGISVL 68

BLAST of Spg021503 vs. NCBI nr
Match: XP_023535494.1 (protein DETOXIFICATION 3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAATTILQYAMQVVAV+MVGHLGDELLLSGVSIASSF N TGI VL
Sbjct: 23 MAATTILQYAMQVVAVIMVGHLGDELLLSGVSIASSFTNVTGISVL 68

BLAST of Spg021503 vs. NCBI nr
Match: XP_022925515.1 (protein DETOXIFICATION 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAATTILQYAMQVVAV+MVGHLGDELLLSGVSIASSF N TGI VL
Sbjct: 23 MAATTILQYAMQVVAVIMVGHLGDELLLSGVSIASSFTNVTGISVL 68

BLAST of Spg021503 vs. NCBI nr
Match: XP_022973952.1 (protein DETOXIFICATION 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-09
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAATTILQYAMQVVAV+MVGHLGDELLLSGVSIASSF N TGI V+
Sbjct: 23 MAATTILQYAMQVVAVIMVGHLGDELLLSGVSIASSFTNVTGISVI 68

BLAST of Spg021503 vs. NCBI nr
Match: XP_038889425.1 (protein DETOXIFICATION 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-08
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAA+TILQY MQ+V+VMMVGHLGDELLLSGVSIASSF+N TG  VL
Sbjct: 29 MAASTILQYGMQIVSVMMVGHLGDELLLSGVSIASSFINVTGCSVL 74

BLAST of Spg021503 vs. ExPASy TrEMBL
Match: A0A6J1EI79 (Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111432792 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.9e-10
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAATTILQYAMQVVAV+MVGHLGDELLLSGVSIASSF N TGI VL
Sbjct: 23 MAATTILQYAMQVVAVIMVGHLGDELLLSGVSIASSFTNVTGISVL 68

BLAST of Spg021503 vs. ExPASy TrEMBL
Match: A0A6J1I8X8 (Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111472575 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 8.4e-10
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAATTILQYAMQVVAV+MVGHLGDELLLSGVSIASSF N TGI V+
Sbjct: 23 MAATTILQYAMQVVAVIMVGHLGDELLLSGVSIASSFTNVTGISVI 68

BLAST of Spg021503 vs. ExPASy TrEMBL
Match: A0A6J1CJB5 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111012127 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAA+TILQY+MQ+VAVMMVGHLGD+LLLSG SIA+SFVN TGI VL
Sbjct: 22 MAASTILQYSMQIVAVMMVGHLGDQLLLSGGSIATSFVNVTGISVL 67

BLAST of Spg021503 vs. ExPASy TrEMBL
Match: A0A1S3CAP0 (protein DETOXIFICATION 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498682 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.6e-08
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAA+TILQY MQ V VMMVGHLGDELLLSG+SIASSF+N TG  VL
Sbjct: 22 MAASTILQYGMQTVGVMMVGHLGDELLLSGLSIASSFINVTGCSVL 67

BLAST of Spg021503 vs. ExPASy TrEMBL
Match: A0A0A0KST7 (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_5G649880 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.0e-08
Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          +AA+T+LQY MQ+V VMMVGHLGDELLLSG+SIASSF+N TG  VL
Sbjct: 22 LAASTVLQYGMQIVGVMMVGHLGDELLLSGLSIASSFINVTGCSVL 67

BLAST of Spg021503 vs. TAIR 10
Match: AT1G15170.1 (MATE efflux family protein )

HSP 1 Score: 43.1 bits (100), Expect = 1.8e-04
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTG 43
          MAA  I Q+ +Q+V++MMVGHLG+ L L+  S+ASSF N TG
Sbjct: 45 MAAVVIAQFMLQIVSMMMVGHLGN-LSLASASLASSFCNVTG 85

BLAST of Spg021503 vs. TAIR 10
Match: AT2G04050.1 (MATE efflux family protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MAA TI QY + V++VM+ GH G EL LSGV++A+SF N +G  +L
Sbjct: 38 MAAVTIAQYLLPVISVMVAGHNG-ELQLSGVALATSFTNVSGFSIL 82

BLAST of Spg021503 vs. TAIR 10
Match: AT2G04040.1 (MATE efflux family protein )

HSP 1 Score: 42.0 bits (97), Expect = 4.0e-04
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MA  TI QY + V++VM+ GH G EL LSGV++A+SF N TG  ++
Sbjct: 38 MATVTIAQYLLPVISVMVAGHNG-ELQLSGVALANSFTNVTGFSIM 82

BLAST of Spg021503 vs. TAIR 10
Match: AT1G15180.1 (MATE efflux family protein )

HSP 1 Score: 41.2 bits (95), Expect = 6.8e-04
Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTG 43
          MAA  I Q+ +Q+++++MVGHLG+ L L+  S+ASSF N TG
Sbjct: 46 MAAVVIAQFMLQIISMVMVGHLGN-LSLASASLASSFCNVTG 86

BLAST of Spg021503 vs. TAIR 10
Match: AT2G04080.1 (MATE efflux family protein )

HSP 1 Score: 40.8 bits (94), Expect = 8.9e-04
Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 0

Query: 1  MAATTILQYAMQVVAVMMVGHLGDELLLSGVSIASSFVNFTGIIVL 47
          MA  TI QY + V++VM+ GH+G EL L+GV++A+SF N +G  ++
Sbjct: 38 MATVTIAQYLLPVISVMVAGHIG-ELELAGVALATSFTNVSGFSIM 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6592361.11.0e-0991.30Protein DETOXIFICATION 3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023535494.11.0e-0991.30protein DETOXIFICATION 3-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022925515.11.0e-0991.30protein DETOXIFICATION 3-like isoform X2 [Cucurbita moschata][more]
XP_022973952.11.7e-0989.13protein DETOXIFICATION 3-like isoform X2 [Cucurbita maxima][more]
XP_038889425.11.5e-0882.61protein DETOXIFICATION 3-like isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EI794.9e-1091.30Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111432792 PE=3 SV=1[more]
A0A6J1I8X88.4e-1089.13Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111472575 PE=3 SV=1[more]
A0A6J1CJB51.6e-0882.61Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111012127 PE=3 SV=1[more]
A0A1S3CAP04.6e-0880.43protein DETOXIFICATION 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498682... [more]
A0A0A0KST76.0e-0876.09Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_5G649880 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G15170.11.8e-0457.14MATE efflux family protein [more]
AT2G04050.12.3e-0454.35MATE efflux family protein [more]
AT2G04040.14.0e-0452.17MATE efflux family protein [more]
AT1G15180.16.8e-0452.38MATE efflux family protein [more]
AT2G04080.18.9e-0447.83MATE efflux family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021503.1Spg021503.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015297 antiporter activity
molecular_function GO:0042910 xenobiotic transmembrane transporter activity