Spg021461 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021461
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionT4.5
Locationscaffold9: 6456062 .. 6464021 (-)
RNA-Seq ExpressionSpg021461
SyntenySpg021461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTAATGGGTGTTAATGGGAAATCTTTTGGTTATTGTTGTTGAGATATTTTTGCTTTGTTTGTTAGTATTTTGTTATTTGGTTATTTTTAGTTTTAGAACTCTTGTATAAATACTCTGTATAGTTCTCTTTGAAATCAAGCAGTAAGAGAATCATCTCCTTCTCAATTGAGTGTTTCCTATTTGACTATTGTTTCATGGTATCAGATTTTTGGTGACTCACGTCTCGATCCTTCCACACTTCTGCATTTCTTAGCGATTTTCTTACCAATGGCTGATTCTACTGCCAGAGATCTCAATTCTCCTATCTTTCTTCTTTCAAATATTTGTAATTTGGTCTCAATTCGGCTAGATTCTACAAATTTTGTTCTATGGAAGCATCAGTTGCGATCAATCTTGAAGGCGCACAAATTGTTTGGATTCATTGATGGATCCTTTCCGAAACCGGCTTCATCTGTACGTACTACCACTTCTTCTTCGTATACTGATTCTTCATCTGCTGTTTCTCAGCCGAATCCACAGTATGAGGACTGGATTGCCAAAGATCACGCACTACAAACTTTGATTAATGCAACTCTTTCTCCCACTGCCTTGGCCTATATTGTTGGTTGTGAGACTGCACAACAAATGTGGGAAACTCTAGAGAAACACTACTGTTCTACTTCGCGAACAAATGTTGTTAACCTAAAATCAGAGTTGCAAACTATTGTGAAGAAATCTGGTGAAAGCATCGCACAATACATCCAACGCATCAAAGAATTGAAAGATAAATTGGCCAATGTTTCCGTCACGATTGATGTAGAGGATCTAGTGATCTACACGATGAGCGGCTTACCTGCTGAATATAACACTTTCAAGACGTCTCTGCGTACTCGATCTCAGTCAGTCACCTTCGAAGAACTTCATGTTCTTCTTGTTTCTGAAGAGTCTGCCCTTGAGAAGAAGATTAAACGTGATGAGGCCTTTGCTCAGCCTACTGCTTTACTTGCACAAACTTCTTCAAATCGCAATCAGAACTACAATCCAAATATACCTCGAGGTCGTGGAAATTCTGGTAATTCTCGAGGCCGTGGAAGAAGTTTTGGTCGTCCTCCTTTTTGTAACTCTGGTCGTGGACATATACCTGGACATCCTGTTGGTAATACTCCGAAACCTCAACTTGATCAGTACTCTTCTCGTATTCAATGTCAGATTTGTCAGCGAGCAGGTCACAGTGCGATTGATTGTTATAATCGCATGAATTACAATTTTCAAGGTCGTCATCCACCTGCTCAGTTAGCTGCTATGGTTGCAACTCAAAATTATAATGTTGTGGCCAACACTTCTGTTTCTCAGCCATCACCTTGGCTTGCTGATTCTGGTTGCAACTCTCATGTTACCTCTGATATGAATCATTGTACTAATTCTTCTGATTTTACTGGTGATGATCAGGTAACTGTTGGCAGTGGACAGTCCCTTCCTATAACACATTCAGGTTGTGGCATTCTTCCTACTTCTACTTCCTCTCTTAAACTCATTGATTTACTTTGTGTTCCTCATATTTCTTCAAATCTTTTATCTGTTAACCGTCTTTGTGCTGATAATAATTGTGTGTTCGTCTTCGATTCTGAATTTTTTCTCATTCAGGACAAATCTTCGGGCAAGATCCTTTTTCAAGGACCTAGTGTCAATGGGTTGTATCCTATCAATCCCACTGGCTGTTTTTCTTCATCTTCCTCTGCTCCTTCGTCACTCGTTGCTCATGTTGGAACACGCACATCCTCTTCAGTCTGGCATGATCGGTTAGGCCATCCTAGTGACCCTATCCTTTTATCTGTACTCAAGACTCTGAATGTGTCTCCTTCTACTGTTCCCAATAGTTTCTGTTATCCCTGTTTACAAGGCAAGCTACATAAATTGCCTTTTCCTACTTCTGTTTCTGTTTCTTTGTATCCGTTGGAAATAATACATGCTGATGTATGGGGACCTTCTCCTGAACCTTCTATTAATGGCTTCAATTACTATGTTTCCTTTGTTATTTGACTATTGTTTCAATGGGGGAGCTTTTTAAGCCTTTTTCATGAAAGTTTCCCCTTGAATAGGAATGGGGAAGACCAAAACCAAAAAAAAAATAAATCAAAATAAATCAAAATAAAAAAAATAAATTTTTTTGATAATAAGTGGGGAGGAAGGGTTTGAACTACAGACCTCGTGATTATCAATACGACTTTATGCCGGTTGATCTATGCTCTTGTTGGCATACCATAAAAACAAATTGACCAACAAATATTGGAAAACTTCAACATTATTACTGAAAATCAAGTCGGACCAAATACAGTGTCTACAACGTCTAATTTCTGGAGGAGTTTGCAAAGAGCCTTAGGTACTCAGTTGCATCTCAGTGCCGCATTTCACCCTCAGACAGATGGTCAAACTGAGCGATTGAACCAAACCCTAGAGGATATGTTGCGAGCATGTGTTCTGGATTTCTCAGGTAGTTGGGATGCACACTTGCACTAAATGGAATTTGCTTATAACAATAGTTATCAAGCAACCATCGATATGTCACCGTTTAAGGCCCAATATGGGAAAAGATGCAGGTCGCCTGTTTATTGGGATGAGGTCGGAGAACGACAATTGTTGGGGCCTGAATTGATCCAAGCCTCCAGTGAGGCTATTCGCTCAATCAGATCGAGAATGTTAACGACCCAAAGCCGACAAAAGAGCTATGCAGATACAAGAATAAGAGATTTAGAGTTTGACGTGGGCGATCATGTTTTCTTGAAGGTAGCTCCAATGAAAGGAGTTTCGAGGTTTGGGAGAAAAGGCAAGCTCAGTCCACGTTTCATCGGTCCGTTCGAGATCTTAGAACGGATTGGTCCGATAGCTTATCGTCTAGCATTGCCACCTTCTCTTTCGGCGGTACACAATGTTTTCCATGTCTCCATTTTGCGGAAGTATTTGGCAAATCCGGCCCACAGAGTGGACTTTGAACCTTTGCAACTTAGTGAGAACTTGACTTATGAGGAGAGACCTATGCTAATTCTTGATAGAGAGGTGAAGGTCCTTTGTAATCGCGAGATAGCTCTCGTAAAGGTCCTTTGGCGAAACCATTTGTCTGAAGAGGCAACGTGGGAGAGAGAAGACGAAATGATGACCAAGTATCCAGAGTTGTTCCAGTACTAGCAACTTTCGAGGACAAAAGTTTTTTAAGGTTAGTATGATGTAACAGCCACTTTGTTTTTTTTTAAAAAAAAAAAAAAAAAGAGGAGGGAAATGATTTTTTTTTAGCCGATCAAAAATGGGGTGAGTGGGGGGAAATTTTCCCCCCACATTTTCCGTCAATCTGACCGTGGGAAAAAAAAAAGATTTTTTTTTCAGATCTTCCTTCTTCTTCCCCCGATTCTCTCTTTCTCCCTCACCGCAATCTCTTTCTATCTCAGCTCTCTCTCTCTCTCTCGTTGCACACAGTTCGTCGCGCTGCCGCCTTTCGCCCTTCGCTCGCCGTCGCTCTGCCACCACCGTCGTCGTTCGTCGTCGCCGCCCTCCAGCTCCTTCGTTCGCCGTCGGTGAGCTCTCGGCTTTCTCTCTCTCGTCTCTTTCTCCCTCAAGTTCACTCTCTCTCTCTCTCTCTTTTGTAACAAATCTGCGCCGCCCCTTCGTCCACGCTCGTCTGAACGCCGTCGCCGATCTGCAGCCTCGTCGCGAGTCACCGGTGAGATCTGTCTCTCAGAATTCTTTCTCTCTCTCGTTTGCCCTCTCGGTCTCACTCCCTATTTTTCTCCCTATTGTGTACAGCTTTCGCGCGCCACCGTTGCCATTCAGATCTGTGCGTTTCTGTCGCTCAAAATCGATCGTCGCCGCCTCCGCCTCAAGAAAAACAGCCTCACGCATCTTGAATGCTCAACGATTTCAGTTAGTGGATAAGGGAGTTGTAAGTTAAAATTTATTGGTCTTTTATGCTTTAATGGAATACCCATTAGCGTTATCTTGATTTAAGGTATCCGTAGTAAGTGGTGATCGAATTATTAAAGGCGGAGCGAATTTGGGAAACTGGACAGCAAGCAGTAGTCTCATTTGGGTGAGTTTTCGACCCTCTCAAGTATTGTGTTTTAGGAAATTTATTGAGATTGGTATGCCTATGATGTGAGACCCTTATATGTGTGTATTAGATCACTTTTTTGCATAACGTGGTTGGTGATATATCAAATTGTTCGGTGTTTTTCAATCAAGCTTAGTTACCTCAAGGTAAGTTAGCTTACTGTAATTAAACTGTAATTGTGCATAGATATGACGGTTGTGCTTCTGGCATGAGATTATGTTAAATATATGTTTGAGTTGAGACTGAAATGATATGTATGTTGTTGATTTCAAGAATATGGATGTTGTGTACTTGTGCTGTGGGATAGATGTGAGTGCGTTGTGGTATCTTGTAGTTGGCTGGCGATAAAAGTAGACACTAGAAGTCATGTTTTCTCTGATTTGAAAGTGTGGAATGCCTGTTATGTTTCTTGTATTTGACTGAGTGGGATGGTGCATACTGGTCTAGTCAGTTAGTAAATTTTGAGAGAATAAGTTCCATTGGTTGGGTTGCAGTTAAAATTAGCGAGTGCTAAGAGGCCGTAAAGGGAAAAGGAGTAAGAAAGGGAAAAGAATAAGCTAGTTGCTCTAGTAGGGGGTCGTGTCAATTAAACACCTAGGACTTAGATGTATTAAACTGAAATGAGGAGCTAGATGGGCGAGACTTGGCTTCGCATACTAGGTGTCATTTACTAACTGTGGAAGTTAATTTCCGACTTAAAACCCATGGGCGCCCCACCAGTGAAATGGTAGTTAATCCGCTTTGCACACAATAGTGCCTTGATGGGTGAGACTTGGCTCCACTGACTGGGTGCCTTCTACCATTAGTAGGAGTAGAGATCTCCCAAAACACCCACTTGTGCACCTTCAGTGAGTTGGCAAATTTTTATAGGTGAGTTAATTGATCACTAGACCCATACTACAAAATGAATGAAATGAAATGAATGGGAATGAGATGACATAACCTTTAGGCCCTTAGCTCGAATAATCTTTTGAAACATTTGTCATTGCATGATTAGCAGTAATGTACTTATAACTGAGTATTTTCCTTAAATACTCATTCTTTTCCCTAACATGTAAATGCAGGTAAAGGCAAGGGTGTACAAAATGCGTGACGGAACGTTGCTGGATGAGCCATGGAATTCCGTAGGATAGACTTCCGCTTTACATGTTTGAAACTCGTTTTATTTGCATTTTTGTGATGTTATGTTTTGATGTTGTTTCCACTTTTAAGATGTTCAATTTAAATGGTGAAGGATTTTAGTTGTTTCTGTTTTAACTGGGATCCCAGGCTGAAAAGTATCGTCATTTTTTTTAAGAATGTTTTTACTCTAAATGTTGTTTCATCTTCATAATTTGAAAGTTAAAGGAAATGCACGTGGTAATGGCCTTAGGATATAGGCATGAAATGTAGGGTCGTTACAATTTAACTTAACCATATAATTTTATAATTATTATGTATTGTTATATTATCATCATTTTGATACATATATCAGTTTATTGATTTTTTTTTAGAACAACCCTATTGAATTAAAAAGATAAAAACAAAAAATGAAAGTTATGAATTTTAAAAGTATATGTTTTAACTAACATAGGTATAGATTTTTTTTTATTGTTCAATTGCTCAATAAACATACCATGTATATAAATGATGTGGTGGAGTGTGGGAATATTAAGAGATTTGTAATAATTATTATTCAATTACTCGAATAAACATTCACATGTAAGTTGGAATACGAGAATGTTAGAGGTTTGAAGCTATTATTACTCAACGATTCAAATAACACGTGGTAAACAAATATTAATTATTTAATTTAGCAATATTTATGAGAGCATTGTTTTTTTTTTTTTCTTTTTGAGGAAGATAATCATTTTTGTTTACCCACATTTAAATTGTTAAAATAGCTAATGTCATTATTATTAAGTTACGTGGGGTGTGATAAAAAAAAACAATTTTGTAAAACTATTTAAAGGTTAATTTGAGTATTATTTACAAATTATAATTAATTTATGTATTAAAGTAAAGCAATTCAAAGAGACATATTTAAGAGAACAATTTTCTTCTCTTGTGTGTTCTTGAGTTTCGTAAGGAAACAAGTTTCTTCTCTACAAAAGTGTGAGTCTTAGAGTGATTACTATCGTGAGCTGATTGACGTTTCCAACAGAGCAATCAAAGGGCACGAGGTTGTGAGCGATGAACAACAAGCAACGACTAAACTACGAGGCTGGGTTGTGAGCGATAGAGGCTGTGGGAAGTTTGATCGTGATGAGCGACGAGATTGGTGTGTCACTAAGAAAAAATAAATAACAAACAAAACAAGCCAACCTTTATTATTGTTGCAGAAATAGATCACACATACTTGTGTGTGTTTTTTTTTAAAGACAATACAAAGACTATTAAAAGTCTTTATTTTGCAGCACATAGAAGAGAAACATAGTTGATTACATAATTGAGAGGAAAGATGAAGATAGATTGAGTTCAAACACATACTCCTCCAAAAATACTTGGTGGAATGCAGAAGCAATCACCGTCGCAAGGTTTAGCAATAAAATGACAATATGATCCTGAGCATCCATTGCTCGGGTTTCCCTTCATCATTTTTCTGACCCTTGCATTCAAGTACTCTGCAACTGCAACTTCATTTTTGTCATCAGAGACAAGTGAAATCACCTTATCTTCTTCAATGGCAGAAGCTAAATGCTTTGAAGAAGAAGCCACCAACATTACCATCAACAGCACCATCAAACCCACTTTCTTCCCCTCCATCTCTCTCTATTCTTATATTTCTCACTTTTTCTTTAAAGGATTATTGCTTTTGCTTCTCTCTCGACTCCTCTATTTATAGCAAAACGAGCAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGAAAAAGGAATCATATCATATTATATCATACTTCAAATCATACTACCGTAAAAAAAGTGGCTAATTTTAAGAATTAATTTTTGACTATTTTGTCCTAATACTAACTTCTTAATTCCAAATATGTCCTCACCATTGTTACTTTTTTATTATTTAAAATGTTTTAAATATTGTAAGGAAAAGCACCTTGCTCCCATGTTCATGAAAGAATGTGTGTCAAATTCGATAACCAAAATTTAATGTTGGTCCGCCAAAGTGAGCTCAGTGGTAATTGGCATATACCCTCGACCACCAGGTCAAAGGTTCGAATCTCTTACCCCAAATGTCGTTTCATATGTTTTGTTTTTTAATCCTTTTGAGTTTAATTGTGATTTTGATACGTGGCTCAACGAAATTAATAATTATCTCACAATATTTTCATATTTCAATAACTTATCCTTATACTCTTTTCACATTCTCCCATTTAAAGGATTTTAAACTCAATGATCATTTAGCCTAAAAATTCAATTTAGCCTAAAGTTCATGAAATTAAATTAAAGTATGTTAAGTTCATAAAGTTAGGTTAAATTGAGTTCAGTTTAAACCCAATATTGTTATTAAGGTAATTGGACCTAAAAGCCAAAAATTTTATCCAAGCCCACAAAGACCTTTGGAAAACTCTATAAATAGGAGGCCTTGACTCATTTGAAGGGGGCAACAAAAAGAAAGGAAGAGGAGAAAGACTGAAGCCCAGAAGGCTCAAAAGATTAAAGCTTTGATCATCCTACAAGACTTGAAGATTGAAGCTTCAATCCTCCTGCAAAAACTCTGAAGATTGAAATTCAGATCCTGCTGCAAAACTCTGAAGATTGAAGCTTCTGCAAGATTCAGAAGATTGAAGCTTCTTAGAAGATCGAAGCCTCTGCAAGATATTCAGAAGATCGAAGCTCTCTGCAAGACTTTGAAGATTGAAGCTTCTACAAAATTTAGAAGATTGAAGCTCTTTGCAAGATCCTGA

mRNA sequence

ATGGTGATTTTTGGTGACTCACGTCTCGATCCTTCCACACTTCTGCATTTCTTAGCGATTTTCTTACCAATGGCTGATTCTACTGCCAGAGATCTCAATTCTCCTATCTTTCTTCTTTCAAATATTTGTAATTTGTCAGTCACCTTCGAAGAACTTCATGTTCTTCTTGTTTCTGAAGAGTCTGCCCTTGAGAAGAAGATTAAACGTGATGAGGCCTTTGCTCAGCCTACTGCTTTACTTGCACAAACTTCTTCAAATCGCAATCAGAACTACAATCCAAATATACCTCGAGGTCGTGGAAATTCTGGTAATTCTCGAGGCCGTGGAAGAAGTTTTGGTCGTCCTCCTTTTTGTAACTCTGGTCGTGGACATATACCTGGACATCCTGTTGGTAATACTCCGAAACCTCAACTTGATCAGTACTCTTCTCGTATTCAATGTCAGATTTGTCAGCGAGCAGCTCTCTCTCTCTCTCTCGTTGCACACAGTTCGTCGCGCTGCCGCCTTTCGCCCTTCGCTCGCCGTCGCTCTGCCACCACCGTCGTCGTTCGTCGTCGCCGCCCTCCAGCTCCTTCGTTCGCCGTCGGTGAGCTCTCGGCTTTCTCTCTCTCGTCTCTTTCTCCCTCAAGTTCACTCTCTCTCTCTCTCTCTTTTGTAACAAATCTGCGCCGCCCCTTCGTCCACGCTCGTCTGAACGCCGTCGCCGATCTGCAGCCTCGTCGCGAGTCACCGGTGAGATCTGTCTCTCAGAATTCTTTCTCTCTCTCGTTTGCCCTCTCGGTCTCACTCCCTATTTTTCTCCCTATTGTGTACAGCTTTCGCGCGCCACCGTTGCCATTCAGATCTGTGCGTTTCTGTCGCTCAAAATCGATCGTCGCCGCCTCCGCCTCAAGAAAAACAGCCTCACGCATCTTGAATGCTCAACGATTTCAGTTAGTGGATAAGGGAGTTGTATCCGTAGTAAGTGGTGATCGAATTATTAAAGGCGGAGCGAATTTGGGAAACTGGACAGCAAGCAGTAGTCTCATTTGGTGGGATGGTGCATACTGGTCTAGTCAAGCAATCAAAGGGCACGAGGTTGTGAGCGATGAACAACAAGCAACGACTAAACTACGAGGCTGGGTTGTGAGCGATAGAGGCTGTGGGAAGTTTGATCGTGATGAGCGACGAGATTGA

Coding sequence (CDS)

ATGGTGATTTTTGGTGACTCACGTCTCGATCCTTCCACACTTCTGCATTTCTTAGCGATTTTCTTACCAATGGCTGATTCTACTGCCAGAGATCTCAATTCTCCTATCTTTCTTCTTTCAAATATTTGTAATTTGTCAGTCACCTTCGAAGAACTTCATGTTCTTCTTGTTTCTGAAGAGTCTGCCCTTGAGAAGAAGATTAAACGTGATGAGGCCTTTGCTCAGCCTACTGCTTTACTTGCACAAACTTCTTCAAATCGCAATCAGAACTACAATCCAAATATACCTCGAGGTCGTGGAAATTCTGGTAATTCTCGAGGCCGTGGAAGAAGTTTTGGTCGTCCTCCTTTTTGTAACTCTGGTCGTGGACATATACCTGGACATCCTGTTGGTAATACTCCGAAACCTCAACTTGATCAGTACTCTTCTCGTATTCAATGTCAGATTTGTCAGCGAGCAGCTCTCTCTCTCTCTCTCGTTGCACACAGTTCGTCGCGCTGCCGCCTTTCGCCCTTCGCTCGCCGTCGCTCTGCCACCACCGTCGTCGTTCGTCGTCGCCGCCCTCCAGCTCCTTCGTTCGCCGTCGGTGAGCTCTCGGCTTTCTCTCTCTCGTCTCTTTCTCCCTCAAGTTCACTCTCTCTCTCTCTCTCTTTTGTAACAAATCTGCGCCGCCCCTTCGTCCACGCTCGTCTGAACGCCGTCGCCGATCTGCAGCCTCGTCGCGAGTCACCGGTGAGATCTGTCTCTCAGAATTCTTTCTCTCTCTCGTTTGCCCTCTCGGTCTCACTCCCTATTTTTCTCCCTATTGTGTACAGCTTTCGCGCGCCACCGTTGCCATTCAGATCTGTGCGTTTCTGTCGCTCAAAATCGATCGTCGCCGCCTCCGCCTCAAGAAAAACAGCCTCACGCATCTTGAATGCTCAACGATTTCAGTTAGTGGATAAGGGAGTTGTATCCGTAGTAAGTGGTGATCGAATTATTAAAGGCGGAGCGAATTTGGGAAACTGGACAGCAAGCAGTAGTCTCATTTGGTGGGATGGTGCATACTGGTCTAGTCAAGCAATCAAAGGGCACGAGGTTGTGAGCGATGAACAACAAGCAACGACTAAACTACGAGGCTGGGTTGTGAGCGATAGAGGCTGTGGGAAGTTTGATCGTGATGAGCGACGAGATTGA

Protein sequence

MVIFGDSRLDPSTLLHFLAIFLPMADSTARDLNSPIFLLSNICNLSVTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSSNRNQNYNPNIPRGRGNSGNSRGRGRSFGRPPFCNSGRGHIPGHPVGNTPKPQLDQYSSRIQCQICQRAALSLSLVAHSSSRCRLSPFARRRSATTVVVRRRRPPAPSFAVGELSAFSLSSLSPSSSLSLSLSFVTNLRRPFVHARLNAVADLQPRRESPVRSVSQNSFSLSFALSVSLPIFLPIVYSFRAPPLPFRSVRFCRSKSIVAASASRKTASRILNAQRFQLVDKGVVSVVSGDRIIKGGANLGNWTASSSLIWWDGAYWSSQAIKGHEVVSDEQQATTKLRGWVVSDRGCGKFDRDERRD
Homology
BLAST of Spg021461 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-07
Identity = 50/108 (46.30%), Postives = 61/108 (56.48%), Query Frame = 0

Query: 47  VTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSS--NRNQNYNPNIPRGRGNSGN 106
           VTFEELHVLL +EESAL K+ KRD+   QPTALLA + S  +    +N N  RGRG    
Sbjct: 193 VTFEELHVLLKAEESALAKQSKRDDLCKQPTALLASSQSLMSYASTFNNNFVRGRG---- 252

Query: 107 SRGRGRSFGRPPFCNSGRGHIPGHPVGNTPKPQLDQYSSRIQCQICQR 153
            RGRG   G   F   GRG       G++ + QL   ++   CQIC R
Sbjct: 253 -RGRGHGHGCSSFDTQGRGG------GSSQQQQLVVANNHSSCQICLR 289

BLAST of Spg021461 vs. NCBI nr
Match: KAG7015254.1 (hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-07
Identity = 50/108 (46.30%), Postives = 61/108 (56.48%), Query Frame = 0

Query: 47  VTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSS--NRNQNYNPNIPRGRGNSGN 106
           VTFEELHVLL +EESAL K+ KRD+   QPTALLA + S  +    +N N  RGRG    
Sbjct: 193 VTFEELHVLLKAEESALAKQSKRDDLCKQPTALLASSQSLMSYASTFNNNFVRGRG---- 252

Query: 107 SRGRGRSFGRPPFCNSGRGHIPGHPVGNTPKPQLDQYSSRIQCQICQR 153
            RGRG   G   F   GRG       G++ + QL   ++   CQIC R
Sbjct: 253 -RGRGHGHGCSSFDTQGRGG------GSSQQQQLVVANNHSSCQICLR 289

BLAST of Spg021461 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-07
Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 0

Query: 46  SVTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQT--SSNRNQNYNPNIPRGRGNSG 105
           SV+FEELHV + SEESA+EK++KR++   QP AL A +  S NR   ++PN    RG  G
Sbjct: 230 SVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGR-G 289

Query: 106 NSRGRGRSFGRPPFCNSGRGHIPGHPVGNTPKPQLDQYSSRIQCQIC 151
            + GRG++   P F N GRG   G+   +       Q  +R  CQIC
Sbjct: 290 KNNGRGKANFAPTFTNQGRGRSSGNFFTSF------QADNRSPCQIC 329

BLAST of Spg021461 vs. NCBI nr
Match: XP_022159298.1 (uncharacterized protein LOC111025709 [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 3.8e-05
Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 46  SVTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSSNRNQNYNPNIPRGRGNSGNS 105
           SV+FEEL+VLLV EE+A++K+ K DE F Q + LLA  ++ + QN NPNIPR RG +G  
Sbjct: 168 SVSFEELYVLLVYEEAAIDKQTKHDEVFVQSSTLLANMAT-KGQNSNPNIPRVRGFNGGG 227

Query: 106 RGR 109
           +G+
Sbjct: 228 KGK 229

BLAST of Spg021461 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus])

HSP 1 Score: 57.0 bits (136), Expect = 4.2e-04
Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 0

Query: 47  VTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSS--NRNQNYNPNIPRGRGNSGN 106
           VTFEELHVLL +EESAL K+ K D+++ QPT LL+ + S  +    +N N  RG G+   
Sbjct: 205 VTFEELHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQSLLSCAPTFNNNFVRGNGH--- 264

Query: 107 SRGRGRSFGRPPFCNSGRGHIPGHPVGNTPKPQLDQYSSRIQCQICQR 153
               G+++G   F  S      GH +    KP  D +++   CQIC R
Sbjct: 265 ----GKNYGHGRF--SFDAQTRGHGLSQEQKPVHDNHAT---CQICSR 300

BLAST of Spg021461 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.9e-08
Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 0

Query: 46  SVTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQT--SSNRNQNYNPNIPRGRGNSG 105
           SV+FEELHV + SEESA+EK++KR++   QP AL A +  S NR   ++PN    RG  G
Sbjct: 230 SVSFEELHVFMKSEESAIEKQMKREDLVTQPNALFASSPQSQNRTSAFHPNQSHDRGR-G 289

Query: 106 NSRGRGRSFGRPPFCNSGRGHIPGHPVGNTPKPQLDQYSSRIQCQIC 151
            + GRG++   P F N GRG   G+   +       Q  +R  CQIC
Sbjct: 290 KNNGRGKANFAPTFTNQGRGRSSGNFFTSF------QADNRSPCQIC 329

BLAST of Spg021461 vs. ExPASy TrEMBL
Match: A0A6J1DYF1 (uncharacterized protein LOC111025709 OS=Momordica charantia OX=3673 GN=LOC111025709 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-05
Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 46  SVTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSSNRNQNYNPNIPRGRGNSGNS 105
           SV+FEEL+VLLV EE+A++K+ K DE F Q + LLA  ++ + QN NPNIPR RG +G  
Sbjct: 168 SVSFEELYVLLVYEEAAIDKQTKHDEVFVQSSTLLANMAT-KGQNSNPNIPRVRGFNGGG 227

Query: 106 RGR 109
           +G+
Sbjct: 228 KGK 229

BLAST of Spg021461 vs. ExPASy TrEMBL
Match: A0A6J1DVX4 (uncharacterized protein LOC111024876 OS=Momordica charantia OX=3673 GN=LOC111024876 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-04
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 0

Query: 47  VTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSSN---RNQNYNPNIPRGRGNSG 106
           ++F ELHVLL SE  A++K+ K D+ F QP AL+  + SN   RNQN NPN  +GR ++G
Sbjct: 146 ISFAELHVLLNSEVVAIDKQSKSDDLFVQPAALVVNSGSNSQVRNQNLNPNYTKGRTSNG 205

Query: 107 NSRGRGRSFGRPPFCNSG 122
                    G+P F  SG
Sbjct: 206 ---------GKPKFAASG 214

BLAST of Spg021461 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-04
Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 0

Query: 47  VTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSS--NRNQNYNPNIPRGRGNSGN 106
           VTFEELHVLL +EESAL K+ K D+++ QPT LL+ + S  +    ++ N  RG G+   
Sbjct: 207 VTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQSLLSCAPTFDNNFVRGNGH--- 266

Query: 107 SRGRGRSFGRPPFCNSGRGHIPGHPVGNTPKPQLDQYSSRIQCQICQR 153
             G+    GR  F    RGH      G++P+ Q   + +   CQIC R
Sbjct: 267 --GKHYGHGRFSFDAQTRGH------GSSPE-QKSVHDNHATCQICSR 302

BLAST of Spg021461 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-04
Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 0

Query: 47  VTFEELHVLLVSEESALEKKIKRDEAFAQPTALLAQTSS--NRNQNYNPNIPRGRGNSGN 106
           VTFEELHVLL +EESAL K+ K D+++ QPT LL+ + S  +    ++ N  RG G+   
Sbjct: 207 VTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSSSQSLLSCAPTFDNNFVRGNGH--- 266

Query: 107 SRGRGRSFGRPPFCNSGRGHIPGHPVGNTPKPQLDQYSSRIQCQICQR 153
             G+    GR  F    RGH      G++P+ Q   + +   CQIC R
Sbjct: 267 --GKHYGHGRFSFDAQTRGH------GSSPE-QKSVHDNHATCQICSR 302

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6588985.11.4e-0746.30Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyr... [more]
KAG7015254.11.4e-0746.30hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022150845.11.8e-0742.99uncharacterized protein LOC111018892 [Momordica charantia][more]
XP_022159298.13.8e-0553.97uncharacterized protein LOC111025709 [Momordica charantia][more]
KAE8645659.14.2e-0439.81hypothetical protein Csa_020439 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D9L68.9e-0842.99uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DYF11.9e-0553.97uncharacterized protein LOC111025709 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DVX44.6e-0444.87uncharacterized protein LOC111024876 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5D3CLI66.0e-0439.81T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=... [more]
A0A1S3BI586.0e-0439.81uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021461.1Spg021461.1mRNA